BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0123 (msmK) DE:MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING
PROTEIN MSMK
(371 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75207 multiple sugar-binding transport ATP-binding protein... 737 0.0
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 652 0.0
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 606 e-172
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 605 e-172
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 426 e-118
pir||C71220 probable sugar-binding transport ATP-binding protein... 421 e-117
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 419 e-116
dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens] 404 e-112
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 394 e-109
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 384 e-106
dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding pr... 378 e-104
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 376 e-103
sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDIN... 375 e-103
gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Th... 374 e-103
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 362 4e-99
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 360 2e-98
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 355 4e-97
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 355 4e-97
pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog ... 354 9e-97
pir||T45204 probable sugar ABC transporter ugpC [imported] - Myc... 353 2e-96
dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.] 347 1e-94
pir||E70952 probable sugC protein - Mycobacterium tuberculosis (... 346 2e-94
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 345 4e-94
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 344 1e-93
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 343 2e-93
pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC... 340 2e-92
sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 335 6e-91
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 331 1e-89
gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other ... 329 3e-89
pir||F71279 probable sugar ABC transporter, ATP-binding protein ... 325 4e-88
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 322 4e-87
pir||S77405 hypothetical protein - Synechocystis sp. (strain PCC... 321 8e-87
pir||S63613 probable ATP-binding protein cymD - Klebsiella oxyto... 319 4e-86
pir||E83248 probable ATP-binding component of ABC transporter PA... 314 8e-85
emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli] 314 8e-85
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 314 1e-84
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 314 1e-84
pir||MMECMK inner membrane protein malK - Escherichia coli >gi|4... 313 2e-84
pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protei... 312 3e-84
sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDI... 312 3e-84
sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 310 2e-83
gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport syst... 309 5e-83
emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycob... 308 6e-83
sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 308 8e-83
emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [... 308 8e-83
dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding pr... 306 3e-82
pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding pr... 305 7e-82
pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [im... 303 3e-81
pir||S05329 inner membrane protein malK - Salmonella typhimurium 302 6e-81
sp|Q9Z3R9|AGLK_RHIME ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROT... 302 6e-81
pir||E70943 probable ABC-type sugar transport protein - Mycobact... 299 4e-80
pir||C83353 probable ATP-binding component of ABC maltose/mannit... 297 2e-79
gb|AAA93151.1| (U12007) MsiK [Streptomyces lividans] 294 8e-79
sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK ... 294 1e-78
pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (... 294 1e-78
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 293 2e-78
gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens] 293 3e-78
sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK) >... 292 4e-78
pir||F72510 probable multiple sugar-binding transport ATP-bindin... 291 1e-77
pir||T03550 ATP-binding transport protein polk - Rhodobacter cap... 290 2e-77
pir||T47062 hypothetical protein [imported] - Yersinia pestis >g... 289 3e-77
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 288 6e-77
gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti] 287 1e-76
gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPa... 287 2e-76
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 283 3e-75
emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-b... 282 4e-75
sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 279 4e-74
pir||T36808 probable sugar transport system ATP-binding chain - ... 274 1e-72
gb|AAB59057.1| (J01648) malK [Escherichia coli] 270 1e-71
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 268 5e-71
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 267 1e-70
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 266 4e-70
pir||T34595 ABC-transporter ATP-binding protein - Streptomyces c... 263 2e-69
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 262 4e-69
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 259 3e-68
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop... 258 8e-68
gi|10954682 probable mikimopine transporter gene~similar to potA... 257 1e-67
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 257 1e-67
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 257 2e-67
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 256 2e-67
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 256 3e-67
pir||T35802 probable polyamine ABC-transporter ATP-binding prote... 254 9e-67
gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus] 253 2e-66
sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 253 2e-66
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 250 1e-65
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 250 2e-65
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 248 7e-65
pir||C81179 spermidine/putrescine ABC transporter, ATP-binding p... 245 6e-64
pir||E71296 probable spermidine/putrescine ABC transporter, ATP-... 245 8e-64
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 244 1e-63
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 244 1e-63
pir||F64751 probable ABC-type transport protein b0262 - Escheric... 244 1e-63
sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 244 1e-63
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 244 1e-63
pir||B83571 probable ATP-binding component of ABC transporter PA... 243 2e-63
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 243 2e-63
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 243 3e-63
pir||G81926 probable polyamine permease ATP-binding protein NMA0... 242 7e-63
dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-bindin... 241 1e-62
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 241 1e-62
pir||G83605 probable ATP-binding component of ABC transporter PA... 240 2e-62
gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas... 240 3e-62
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 239 3e-62
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 237 1e-61
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 237 2e-61
pir||A83621 probable ATP-binding component of ABC transporter PA... 237 2e-61
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 236 3e-61
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 236 4e-61
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 234 2e-60
pir||H83240 probable ATP-binding component of ABC transporter PA... 234 2e-60
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 233 2e-60
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 233 3e-60
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 232 4e-60
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 231 1e-59
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 225 6e-58
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 224 1e-57
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 222 6e-57
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 222 6e-57
gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter;... 220 2e-56
sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC >... 219 4e-56
gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens] 218 7e-56
pir||H72690 probable spermidine/putrescine transport ATP-binding... 211 1e-53
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 211 1e-53
gb|AAC12799.1| (U67851) ChtG [Agrobacterium sp.] >gi|3153868|gb|... 208 1e-52
pir||C69223 anion permease - Methanobacterium thermoautotrophicu... 201 1e-50
gb|AAA92009.1| (U37409) ABC multiple sugar transport protein [La... 200 2e-50
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 198 7e-50
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 195 8e-49
pir||F81929 probable iron-uptake permease ATP-binding protein NM... 187 1e-46
sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 175 6e-43
sp|P47433|Y187_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 175 1e-42
gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874... 172 5e-42
sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFU... 171 1e-41
pir||T43920 YfuC protein [imported] - Yersinia enterocolitica >g... 166 5e-40
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 162 7e-39
pir||B70118 glycine betaine, L-proline ABC transporter, ATP-bind... 160 2e-38
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 157 2e-37
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 155 6e-37
emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coe... 155 6e-37
emb|CAB90903.1| (AL355753) putative ABC-transport protein, ATP-b... 155 7e-37
pir||D81435 probable iron-uptake ABC transport system ATP-bindin... 154 1e-36
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 154 1e-36
sp|P45769|YHDZ_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 153 3e-36
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 152 5e-36
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 151 1e-35
pir||E82932 spermidine/putrescine transport ATP-binding protein ... 148 9e-35
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 146 4e-34
sp|Q58903|YF08_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 145 6e-34
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 145 1e-33
pir||C82266 ABC transporter, ATP-binding protein VC0907 [importe... 145 1e-33
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 143 2e-33
sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TR... 141 9e-33
pir||E83012 probable ATP-binding component of ABC transporter PA... 141 2e-32
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 140 3e-32
sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 139 5e-32
gb|AAG24255.1| (AY009114) YckI [Bacillus subtilis] 138 1e-31
pir||I40452 ABC-type transport system probable ATP binding subun... 137 2e-31
sp|P39456|YCKI_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 137 2e-31
sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 137 2e-31
gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus p... 135 9e-31
pir||H82425 molybdenum ABC transporter, ATP-binding protein VCA0... 134 1e-30
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur... 134 2e-30
pir||F81363 probable glutamine transport ATP-binding protein Cj0... 134 2e-30
pir||F83122 probable ATP-binding component of ABC transporter PA... 132 5e-30
pir||D83281 histidine transport protein HisP PA2926 [imported] -... 132 8e-30
sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 131 1e-29
emb|CAA71848.1| (Y10908) sulfate transport ATP-binding protein [... 130 2e-29
pir||S71363 probable ATP-binding cassette transporter ABC-3 - hu... 126 5e-28
gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-bind... 126 5e-28
gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sa... 126 5e-28
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 109 4e-23
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 109 4e-23
gb|AAG01549.1|AF291822_1 (AF291822) multidrug resistance protein... 101 1e-20
emb|CAC11779.1| (AL445064) daunorubicin resistance protein relat... 98 1e-19
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 98 2e-19
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 93 6e-18
gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, comp... 93 6e-18
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 92 9e-18
sp|P77509|YPHE_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 89 6e-17
pir||B64551 oligopeptide ABC transporter, ATP-binding protein - ... 88 1e-16
pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC... 85 9e-16
gb|AAC04781.1| (AF036920) sugar transport ATP-binding protein ho... 83 6e-15
pir||B72759 probable ABC transporter ATP-binding protein APE0063... 82 1e-14
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 737 bits (1881), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI
Sbjct: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV
Sbjct: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA
Sbjct: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI
Sbjct: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH 360
RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH
Sbjct: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH 360
Query: 361 VFNKTNERAIF 371
VFNKTNERAIF
Sbjct: 361 VFNKTNERAIF 371
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 652 bits (1664), Expect = 0.0
Identities = 322/372 (86%), Positives = 346/372 (92%), Gaps = 1/372 (0%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MAEVKLIN+WK+FGD TAVK+LSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT GQI
Sbjct: 4 MAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQI 63
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YI+D LVADPEKG+FVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEID+RV
Sbjct: 64 YIEDNLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKRV 123
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REVAEMLGLTELL RKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA
Sbjct: 124 REVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 183
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMN+GELQQVGTPDEVY KP+NTFVAGFI
Sbjct: 184 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFI 243
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
GSPPMNFL AT++ DGFLDFGEF+LKLL+DQFEVLEE N++GKEVIFGIRPED++DASF
Sbjct: 244 GSPPMNFLDATITDDGFLDFGEFKLKLLQDQFEVLEEENMVGKEVIFGIRPEDVHDASFT 303
Query: 301 RVEEP-ENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
++ P EN V+A VDI+ENLGGEKIVHLR G+I FTAKFP+ES V EG E V FDMKK
Sbjct: 304 HIDVPEENTVKATVDIIENLGGEKIVHLRRGNISFTAKFPKESKVREGDEVSVVFDMKKI 363
Query: 360 HVFNKTNERAIF 371
H+F K E+AIF
Sbjct: 364 HIFRKDTEKAIF 375
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 606 bits (1546), Expect = e-172
Identities = 299/372 (80%), Positives = 334/372 (89%), Gaps = 1/372 (0%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L++VWK FG+ TAV+ELSLE+KDGEF++LLGPSGCGKTTTLRMIAGLEEP+ GQI
Sbjct: 1 MAGVRLVDVWKVFGEVTAVRELSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YI D+LVADPEKGIFVPPK+RD+AMVFQSYALYPHMTVYDNIAFPLKLRKVP+QEID+RV
Sbjct: 61 YIGDRLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REVAE+LGLTELL RKPRELSGGQRQRVALGRAI+R+P+VFLMDEPLSNLDAKLRV+MRA
Sbjct: 121 REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRA 180
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRG LQQVG+PDEVY+KP NTFVAGFI
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFI 240
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
GSPPMNFL A V+ DGF+DFGEFRLKLL DQFEVL E +G+EVIFGIRPED+YDA F
Sbjct: 241 GSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFA 300
Query: 301 RVEEP-ENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
RV P EN+VRA V+IVENLG E+IVHLR+G + F F ES V EG E +V FDMKK
Sbjct: 301 RVRVPGENLVRAVVEIVENLGSERIVHLRVGGVTFVGAFRSESRVREGVEVDVVFDMKKI 360
Query: 360 HVFNKTNERAIF 371
H+F+KT +AIF
Sbjct: 361 HIFDKTTGKAIF 372
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 605 bits (1544), Expect = e-172
Identities = 298/372 (80%), Positives = 334/372 (89%), Gaps = 1/372 (0%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L++VWK FG+ TAV+E+SLE+KDGEF++LLGPSGCGKTTTLRMIAGLEEP+ GQI
Sbjct: 1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YI DKLVADPEKGIFVPPK+RD+AMVFQSYALYPHMTVYDNIAFPLKLRKVP+QEID+RV
Sbjct: 61 YIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REVAE+LGLTELL RKPRELSGGQRQRVALGRAI+R+P+VFLMDEPLSNLDAKLRV+MRA
Sbjct: 121 REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRA 180
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRG LQQVG+PDEVY+KP NTFVAGFI
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFI 240
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
GSPPMNFL A V+ DGF+DFGEFRLKLL DQFEVL E +G+EVIFGIRPED+YDA F
Sbjct: 241 GSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFA 300
Query: 301 RVEEP-ENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
+V P EN+VRA V+IVENLG E+IVHLR+G + F F ES V EG E +V FDMKK
Sbjct: 301 QVRVPGENLVRAVVEIVENLGSERIVHLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKI 360
Query: 360 HVFNKTNERAIF 371
H+F+KT +AIF
Sbjct: 361 HIFDKTTGKAIF 372
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 426 bits (1084), Expect = e-118
Identities = 224/374 (59%), Positives = 276/374 (72%), Gaps = 12/374 (3%)
Query: 1 MAEVKLINVWKKFGD-FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA+V L NV K + + AVK +L ++D EF+VLLGPSGCGKTTTLRMIAGLEE T G+
Sbjct: 3 MAQVVLENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITDGK 62
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
IYID K+V D E PK+RD+AMVFQ+YALYPHMTVY+N+AF LKLRK PK EIDRR
Sbjct: 63 IYIDGKVVNDVE------PKDRDIAMVFQNYALYPHMTVYENMAFGLKLRKYPKDEIDRR 116
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
VRE A++LG+ LL RKPR+LSGGQRQRVA+GRAI+R PKVFL DEPLSNLDAKLRV+MR
Sbjct: 117 VREAAKILGIENLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMR 176
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+ELKKL +L T IYVTHDQVEAMTM D+I VM GE+QQ+GTP E+YN P N FVAGF
Sbjct: 177 SELKKLHHRLQATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEIYNSPANVFVAGF 236
Query: 240 IGSPPMNFLTA-TVSSDG--FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYD 296
IGSPPMNF+ A V +G ++ F++K+ K+ + L N I KE+IFGIRPEDIYD
Sbjct: 237 IGSPPMNFVNARVVRGEGGLWIQASGFKVKVPKEFEDKLA--NYIDKEIIFGIRPEDIYD 294
Query: 297 ASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDM 356
F PEN + VD+VE LG E I+H+++GD + A + +E Q+ ++ DM
Sbjct: 295 KLFALAPSPENTITGVVDVVEPLGSETILHVKVGDDLIVASVNPRTQAKEEQKIDLVLDM 354
Query: 357 KKAHVFNKTNERAI 370
+ H F+K E+AI
Sbjct: 355 TRMHAFDKETEKAI 368
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 421 bits (1070), Expect = e-117
Identities = 219/372 (58%), Positives = 278/372 (73%), Gaps = 11/372 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M EVKL N+ K+FG+FTAV +L+L IKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT G+I
Sbjct: 10 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI 69
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y D+ V ++PPK+R+++MVFQSYA++PHMTVY+NIAFPLK++K PK EID+RV
Sbjct: 70 YFGDRDVT------YLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRV 123
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
R AE+L + ELL R P +LSGGQRQRVA+ RAI+ P V LMDEPLSNLDAKLRV MRA
Sbjct: 124 RWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRA 183
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+KKLQ++L VTTIYVTHDQVEAMTMGDRIAVMNRG+L Q+G+P EVY +P + FVA FI
Sbjct: 184 EIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFI 243
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
G+P MN L +V DG+L+ FR++L +D ++L++ +GK V+FGIRPE +
Sbjct: 244 GAPEMNILEVSV-GDGYLEGRGFRIELPQDLMDLLKD--YVGKTVLFGIRPEHMTVEGVS 300
Query: 301 RVEEPENIVR--AKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKK 358
+ + R KVD VE LG + I+H++ GD + K P +E G+E +V D+
Sbjct: 301 ELAHMKRTARLIGKVDFVEALGTDTILHVKFGDELVKVKLPGHIPIEPGREVKVIMDLDM 360
Query: 359 AHVFNKTNERAI 370
HVF+K E+AI
Sbjct: 361 IHVFDKDTEKAI 372
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 419 bits (1065), Expect = e-116
Identities = 221/372 (59%), Positives = 277/372 (74%), Gaps = 11/372 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M EV+L N+ KKFG+FTAV +L+L IKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT G+I
Sbjct: 1 MVEVRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y D+ V ++PP+ER+++MVFQSYA++PHMTVYDNIAFPLK++K P+ EID+RV
Sbjct: 61 YFGDREVT------YLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
R AE+L + ELL R P +LSGGQRQRVA+ RAI+ P V LMDEPLSNLDAKLRV MRA
Sbjct: 115 RWAAELLQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRA 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+KKLQ++L VTTIYVTHDQVEAMTMGDRIAVMNRG+L QVG P EVY KP + FVA FI
Sbjct: 175 EIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEVYLKPNSVFVATFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE--DIYDAS 298
G+P MN + +V DG+L+ F+++L +D E+L + IGK V+FGIRPE + S
Sbjct: 235 GAPEMNIVEVSV-GDGYLEGKGFKIELPQDIMELLRD--YIGKTVLFGIRPEHMTVEGVS 291
Query: 299 FIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKK 358
+ + + AKVD VE LG + I+H++ GD + K P +E G+E + D+
Sbjct: 292 ELAHMKKTAKLNAKVDFVEALGTDTILHVKFGDELVKVKLPGHIPIEVGKEVTIVIDLDM 351
Query: 359 AHVFNKTNERAI 370
HVF+K E+AI
Sbjct: 352 MHVFDKDTEKAI 363
>dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens]
Length = 369
Score = 404 bits (1027), Expect = e-112
Identities = 204/371 (54%), Positives = 269/371 (71%), Gaps = 10/371 (2%)
Query: 1 MAEVKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA + L +++K + GD TAVK+ +LEI D EF+V +GPSGCGK+TTLRMIAGLEE + G+
Sbjct: 1 MANLSLKHIYKVYPGDVTAVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISKGE 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+YI D+LV + E PKERD+AMVFQSYALYPHMTVYDN+AF LKLRKVPK EID++
Sbjct: 61 LYIGDRLVNEVE------PKERDIAMVFQSYALYPHMTVYDNMAFGLKLRKVPKDEIDKK 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V++ A++L + LL RKP+ LSGGQRQRVALGRAI+R PKVFLMDEPLSNLDAKLRV+MR
Sbjct: 115 VKDAAKILDIEHLLDRKPKALSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
E+ KL ++L T IYVTHDQVEAMTMG RI VM G +QQV +P E+YN P N FVAGF
Sbjct: 175 TEISKLHQRLQTTFIYVTHDQVEAMTMGTRIVVMKDGIVQQVDSPQEIYNNPANIFVAGF 234
Query: 240 IGSPPMNFLTATVSSDG---FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYD 296
IGSP MNF+ T+ +G F F ++++ D+ +L+E IGK VI G+RPE + D
Sbjct: 235 IGSPQMNFIDGTIKEEGGKYFACFQSEKIEMPMDKARLLKEKGYIGKNVIIGVRPEHLDD 294
Query: 297 ASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDM 356
+ + ++++KV++ E +G E ++ +LGD T + + ++ GQEA+ + D
Sbjct: 295 DQELGEGKSTTVIKSKVEVTELMGAESYIYTKLGDQNITVRVNGSTKLQNGQEAKFYVDA 354
Query: 357 KKAHVFNKTNE 367
K H+F+K E
Sbjct: 355 NKIHIFDKETE 365
>gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protein [Bacillus
firmus]
Length = 366
Score = 394 bits (1002), Expect = e-109
Identities = 199/371 (53%), Positives = 262/371 (69%), Gaps = 8/371 (2%)
Query: 1 MAEVKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA+++L N++K + GD TAV + +L+IKD EF+V +GPSGCGK+TTLRMIAGLE+ + G
Sbjct: 1 MADIQLKNIYKIYDGDVTAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+YI D+ V D V PK+RD+AMVFQ+YALYPHM VY+N+AF LKLRK K EIDRR
Sbjct: 61 LYIGDRRVND------VAPKDRDIAMVFQNYALYPHMNVYENMAFGLKLRKFKKDEIDRR 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
VR+ A++LGL +L RKP+ +SGGQRQRVALGRAI+R P+VFLMDEPLSNLDAKLRV+MR
Sbjct: 115 VRDAAKILGLEAMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
AE+ KL ++L TTIYVTHDQ EAMTM RI +M G +QQVGTP +VY+ P N FV GF
Sbjct: 175 AEITKLHKRLQTTTIYVTHDQTEAMTMATRIVIMKDGFIQQVGTPKDVYDNPENVFVGGF 234
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
IGSP MNF+T + D + G+ +K+ + VL + + KE+I GIRPEDI+D
Sbjct: 235 IGSPSMNFITGKIEGD-YFKVGDVTVKVPAGKLSVLRDKGYMNKEIILGIRPEDIHDELL 293
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
PE + A++D+ E G E +++ + F A+ + +E GQ ++ FDM K+
Sbjct: 294 FIESSPETKLTAEIDVAELTGAETVLYSSVNGQAFVARIDSRTDIEGGQSLDLAFDMNKS 353
Query: 360 HVFNKTNERAI 370
H F+ E I
Sbjct: 354 HFFDAETELRI 364
>sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMX
>gi|7442505|pir||B69661 multiple sugar-binding transport
ATP-binding protein msmX - Bacillus subtilis
>gi|1783246|dbj|BAA11723.1| (D83026) highly homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636416|emb|CAB15907.1| (Z99123)
multiple sugar-binding transport ATP-binding protein
[Bacillus subtilis]
Length = 365
Score = 384 bits (976), Expect = e-106
Identities = 200/368 (54%), Positives = 258/368 (69%), Gaps = 8/368 (2%)
Query: 1 MAEVKLINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MAE+++ +++K + AV + +L I D EF+V +GPSGCGK+TTLRM+AGLEE + G
Sbjct: 1 MAELRMEHIYKFYDQKEPAVDDFNLHIADKEFIVFVGPSGCGKSTTLRMVAGLEEISKGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
YI+ K V D V PK+RD+AMVFQ+YALYPHMTVYDNIAF LKLRK+PK EI +R
Sbjct: 61 FYIEGKRVND------VAPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKMPKPEIKKR 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V E A++LGL E L RKP+ LSGGQRQRVALGRAI+R KVFLMDEPLSNLDAKLRV+MR
Sbjct: 115 VEEAAKILGLEEYLHRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
AE+ KL ++L TTIYVTHDQ EA+TM RI VM G++QQ+GTP +VY P N FV GF
Sbjct: 175 AEIIKLHQRLQTTTIYVTHDQTEALTMATRIVVMKDGKIQQIGTPKDVYEFPENVFVGGF 234
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
IGSP MNF + +DG + G L + + + +VL E IGKEVIFGIRPEDI+D
Sbjct: 235 IGSPAMNFFKGKL-TDGLIKIGSAALTVPEGKMKVLREKGYIGKEVIFGIRPEDIHDELI 293
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
+ + ++AK+++ E LG E +++ ++ + F A+ ++ G E V FDM K
Sbjct: 294 VVESYKNSSIKAKINVAELLGSEIMIYSQIDNQDFIARIDARLDIQSGDELTVAFDMNKG 353
Query: 360 HVFNKTNE 367
H F+ E
Sbjct: 354 HFFDSETE 361
>dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding protein) [Bacillus
halodurans]
Length = 365
Score = 378 bits (960), Expect = e-104
Identities = 197/371 (53%), Positives = 257/371 (69%), Gaps = 8/371 (2%)
Query: 1 MAEVKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MAE++L NV+K + GD AV + +L+IKD EF+V +GPSGCGK+TTLRMIAGLE+ + G
Sbjct: 1 MAEIQLKNVYKIYDGDVQAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ I K + D V PK+RD+AMVFQ+YALYPHM VYDN+AF LKLRK K EID+R
Sbjct: 61 LLIGGKRMND------VAPKDRDIAMVFQNYALYPHMNVYDNMAFGLKLRKFKKDEIDKR 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V+ A++LGL E+L RKP+ +SGGQRQRVALGRAI+R P+VFLMDEPLSNLDAKLRV+MR
Sbjct: 115 VKNAAKILGLEEMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
AE+ KL ++L TTIYVTHDQ EAMTM RI +M G +QQVG+P EVY+ P N FV GF
Sbjct: 175 AEITKLHQRLQTTTIYVTHDQTEAMTMATRIVIMKDGVIQQVGSPKEVYDFPENVFVGGF 234
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
IGSP MNFL + L G +++ + + VL E+ GKE+I GIRPEDI+D
Sbjct: 235 IGSPSMNFLNGRLEGSQ-LKIGNVSIEVPEGKLAVLREHGYEGKELILGIRPEDIHDELL 293
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
P + + A +++ E G E +++ +L D A+ S ++ G + E+ DM K
Sbjct: 294 FIESSPGSKITAHIEVAELTGAETVLYSQLSDQEIIARVDSRSDIQSGDKVELALDMNKC 353
Query: 360 HVFNKTNERAI 370
H F+ +E I
Sbjct: 354 HFFDPESELRI 364
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 376 bits (955), Expect = e-103
Identities = 201/374 (53%), Positives = 265/374 (70%), Gaps = 27/374 (7%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA+VK+ V K FG+ A+ + L + +GEFLVLLGPSGCGKTT LR IAGLE+ T G+I
Sbjct: 1 MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ +D+ V + +PPK+R+++MVFQSYA++PHM VYDNIA+PLKL+KVPK+EI++RV
Sbjct: 61 FFNDRDVTN------LPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ A++L ++ELL R P +LSGGQRQRVA+ RAI+ P+V LMDEPLSNLDA LRVKMR+
Sbjct: 115 KWAADLLHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRS 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELKKLQ ++GVTTIYVTHDQ EAMTMGDRIAVMN+G+LQQVGTP E+Y+ P+N FVAGF+
Sbjct: 175 ELKKLQERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFV 234
Query: 241 GSPPMNFLTATVSSDG---FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
GSP MNFL V S+G L GE ++ D K+VI GIRPE++Y
Sbjct: 235 GSPQMNFLEMEVRSEGNSVVLQNGEIKIPAKTDPG---------AKKVILGIRPENVY-- 283
Query: 298 SFIRVEEPENIVR--AKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
+EE N ++ +V E L + I+HL +G AK P + G++ F D
Sbjct: 284 ----LEEKPNTLKLEGEVYFAEKLMSDTILHLNVGSEKIVAKIPGDVDFRSGEKITFFLD 339
Query: 356 MKKAHVFN-KTNER 368
++K H+F+ +T ER
Sbjct: 340 VEKIHLFHPETGER 353
>sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
>gi|282320|pir||E42400 ABC-type transport system
ATP-binding protein msmK [validated] - Streptococcus
mutans >gi|153741|gb|AAA26938.1| (M77351) ATP-binding
protein [Streptococcus mutans]
Length = 377
Score = 375 bits (953), Expect = e-103
Identities = 192/382 (50%), Positives = 263/382 (68%), Gaps = 18/382 (4%)
Query: 1 MAEVKLINVWKKFGDFT--AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
M E+ L +++KK+ + + +V++ L+IK+ EF+V +GPSGCGK+TTLRM+AGLE+ T G
Sbjct: 1 MVELNLNHIYKKYPNSSHYSVEDFDLDIKNKEFIVFVGPSGCGKSTTLRMVAGLEDITKG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
++ ID ++V D PK+RD+AMVFQ+YALYPHM+VYDN+AF LKLR K+ ID+
Sbjct: 61 ELKIDGEVVNDKA------PKDRDIAMVFQNYALYPHMSVYDNMAFGLKLRHYSKEAIDK 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
RV+E A++LGLTE L+RKP +LSGGQRQRVA+GRAI+R KVFLMDEPLSNLDAKLRV M
Sbjct: 115 RVKEAAQILGLTEFLERKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSM 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNR----------GELQQVGTPDEVY 228
RAE+ K+ R++G TTIYVTHDQ EAMT+ DRI +M+ G ++QVGTP E+Y
Sbjct: 175 RAEIAKIHRRIGATTIYVTHDQTEAMTLADRIVIMSSTKNEDGSGTIGRVEQVGTPQELY 234
Query: 229 NKPLNTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFG 288
N+P N FVAGFIGSP MNF T+ + + + + Q ++LE K +IFG
Sbjct: 235 NRPANKFVAGFIGSPAMNFFDVTIKDGHLVSKDGLTIAVTEGQLKMLESKGFKNKNLIFG 294
Query: 289 IRPEDIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQ 348
IRPEDI + ++ P+ V A+V + E LG E +++L+LG F A+ E G+
Sbjct: 295 IRPEDISSSLLVQETYPDATVDAEVVVSELLGSETMLYLKLGQTEFAARVDARDFHEPGE 354
Query: 349 EAEVFFDMKKAHVFNKTNERAI 370
+ + F++ K H F+ E AI
Sbjct: 355 KVSLTFNVAKGHFFDAETEAAI 376
>gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Thermoanaerobacter
ethanolicus]
Length = 371
Score = 374 bits (951), Expect = e-103
Identities = 198/378 (52%), Positives = 266/378 (69%), Gaps = 14/378 (3%)
Query: 1 MAEVKLINVWKKF-----GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEP 55
MA++ +V K+F G AV + + I+D EF+VL+GPSGCGKTTTLRMIAGLE
Sbjct: 1 MAKIVFEHVTKEFIDEKRGKVIAVNDANFTIEDKEFVVLVGPSGCGKTTTLRMIAGLERQ 60
Query: 56 TIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQE 115
T G IYI +KLV ++PPK+RD+AMVFQ YALYPHMTVY+N++F L+ KVP+ E
Sbjct: 61 TKGNIYIGEKLVN------YLPPKDRDIAMVFQDYALYPHMTVYENLSFGLRNLKVPRTE 114
Query: 116 IDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLR 175
I+++V+ AE+LG++ELL RKPRELSGGQRQRVA+GRAI+R PKVFL DEPLSNLDAKLR
Sbjct: 115 IEQKVKRAAEILGISELLDRKPRELSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLR 174
Query: 176 VKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTF 235
V+MR EL +L ++L T +YVTHDQVEAMT+G RI VMN G +QQ+ TPDE+YN+P+N F
Sbjct: 175 VQMRVELAELHKKLETTIVYVTHDQVEAMTLGQRIIVMNLGIIQQIATPDELYNRPVNMF 234
Query: 236 VAGFIGSPPMNFLTATVSSDGFL--DFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPED 293
VAGFIG+P MNF+ V + + D + + +F+ + N+ GKE++ GIRPED
Sbjct: 235 VAGFIGAPSMNFINCKVERNKIILSDGNSNTMFDIPQKFKKVIA-NINGKEMVMGIRPED 293
Query: 294 IYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVF 353
IYDA F + E + V V +VE LG E +++ TA+ +S + G+ A+V
Sbjct: 294 IYDAVFSQNIENKLHVDVYVKVVEKLGSENLIYFDKYGTTITARVNSQSRIVSGEYAKVA 353
Query: 354 FDMKKAHVFNKTNERAIF 371
F++ K ++F+K AI+
Sbjct: 354 FNIDKIYLFDKETGIAIY 371
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 362 bits (919), Expect = 4e-99
Identities = 196/350 (56%), Positives = 248/350 (70%), Gaps = 22/350 (6%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V L NV K FGD AV +L+LE+KDGEF+VLLGPSGCGK+TTLR+IAGLE PT G+I
Sbjct: 1 MARVLLKNVTKVFGDVVAVNKLNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGEI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I DKLV D + P +R+VAMVFQ+YALYPHMTV+ NI FPLK+ VPK E ++V
Sbjct: 61 WIGDKLVND------IDPTKRNVAMVFQNYALYPHMTVFGNIEFPLKMAGVPKSERIKKV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+E+A+ LG+ +LL RKP ELSGGQ+QRVAL RA++R P+VFL+DEPLSNLDAK+R +MR
Sbjct: 115 KEIADFLGIGDLLNRKPSELSGGQQQRVALARALVREPEVFLLDEPLSNLDAKIRTQMRF 174
Query: 181 ELKK-LQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
ELKK L L +TTIYVTHDQVEAMTM DRIAVMN+G +QQVGTPDE++ KP NTFVA F
Sbjct: 175 ELKKLLSYDLKITTIYVTHDQVEAMTMADRIAVMNKGVIQQVGTPDEIFYKPKNTFVATF 234
Query: 240 IGSPPMNFLTA-TVSSDG--FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYD 296
+GSP MN + + DG D GEF L+L +D N+ G+ VI G RP+ +
Sbjct: 235 VGSPQMNLIEGEIIKKDGKVIFDCGEFSLRLPEDL-------NIEGR-VILGFRPQHVEV 286
Query: 297 ASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEE 346
+ R E+ + K+ +E LG E H GD+ + P+E ++E
Sbjct: 287 SEMPR----EDFIEGKLIGIEKLGVESYAHPAYGDVEIIIRVPEELKIKE 332
>pir||D75308 sugar ABC transportor, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459951|gb|AAF11701.1|AE002049_6 (AE002049) sugar
ABC transportor, ATP-binding protein [Deinococcus
radiodurans]
Length = 455
Score = 360 bits (913), Expect = 2e-98
Identities = 195/371 (52%), Positives = 258/371 (68%), Gaps = 10/371 (2%)
Query: 1 MAEVKLINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MAEV L +V K +G+ AVK+ +LEI D EF+V +GPSGCGK+TTLRMIAGLE+ + G
Sbjct: 36 MAEVILEHVNKYYGNKQHAVKDFNLEIADREFMVFVGPSGCGKSTTLRMIAGLEDISDGV 95
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ I D++V D VPPK+RD+AMVFQ+YALYPHM VY+N+AF LKLRK P++EID+R
Sbjct: 96 LRIGDRVVND------VPPKDRDIAMVFQNYALYPHMNVYENMAFGLKLRKTPREEIDKR 149
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
VR+ A +L + LL RKP+ELSGGQRQRVA+GRAI+R P VFLMDEPLSNLDAKLRV+MR
Sbjct: 150 VRDAARILQIEHLLGRKPKELSGGQRQRVAMGRAIVREPSVFLMDEPLSNLDAKLRVEMR 209
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+++ +L R+LG T IYVTHDQVEAMT+G+RI VM G + QV TP +Y+ P N FVAGF
Sbjct: 210 SQISQLHRRLGATIIYVTHDQVEAMTLGNRIVVMRDGVIMQVDTPMNLYDFPQNRFVAGF 269
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
IGSP MNFLTA V + F+ G+ ++ + E L G+EV GIRPE +
Sbjct: 270 IGSPSMNFLTARVQNGEFV-IGQSQVAAMGRLAESLRAYE--GREVFLGIRPEHVGLVGH 326
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
+ + N++R +V +VE+LG + + + + TAK + V+ G + E+ D +
Sbjct: 327 SDLPQGRNVLRGEVVVVESLGAQTDLIVDVAGQQVTAKVEGMAPVQPGDQVELLIDQTRL 386
Query: 360 HVFNKTNERAI 370
H F+ E AI
Sbjct: 387 HAFDTETELAI 397
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 355 bits (902), Expect = 4e-97
Identities = 195/372 (52%), Positives = 253/372 (67%), Gaps = 26/372 (6%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
+A V+L + K+FG A+K + LEIKDGE +VLLGPSGCGKTTTLR++AGLE P G++
Sbjct: 3 VAGVRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRV 62
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y D + V +PPK+R+VAMVFQSYAL+PHM V+DNIAFPLK++K+P+ EI RRV
Sbjct: 63 YFDGRDVTG------LPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRV 116
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
R AE+L + LL R P +LSGGQ+QRVA+ RAI+ P+V LMDEPLSNLDA LR+KMR+
Sbjct: 117 RWAAELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRS 176
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+KKLQR+LGVT IYVTHDQVEAM +GDRI VMN GE+QQVGTP +VY++P NTFVA FI
Sbjct: 177 EIKKLQRRLGVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHRPANTFVATFI 236
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
GSP MN + V+ RL+ L ++E L EV+ G+RPED +
Sbjct: 237 GSPQMNLFSGKVAGG--------RLEALGG---IVEGVGLPDGEVLVGVRPED------V 279
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRL--GDIIFTAKFPQESVVEEGQEAEVFFDMKK 358
+ + + A VD VE+LG + +VHL+ G +I AK G +K
Sbjct: 280 ALGKGDLTFEAYVDFVEDLGSDSVVHLKTQSGQVI-VAKLSGGEPPSPGSRVIAGVSREK 338
Query: 359 AHVFNKTNERAI 370
H+F+K + +AI
Sbjct: 339 IHIFDKESGKAI 350
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 355 bits (902), Expect = 4e-97
Identities = 187/370 (50%), Positives = 261/370 (70%), Gaps = 13/370 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M E+KL N+ KKFG+FTA+ ++L+IKDGEF+ LLGPSG GK+T L IAG+ +PT G+I
Sbjct: 1 MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y D+K V + +PPK+R+V +VFQ++ALYPHMTVY NIAFPL+LRK P++EID++V
Sbjct: 61 YFDEKDVTE------LPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REVA+ML + +LL R P +LSGGQ+QRVA+ RA+++ P+V L+DEPLSNLDA LR+++RA
Sbjct: 115 REVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELK+LQ++LG+TT+YVTHDQ EA+ M DRIAV+ GE+ QVGTPDEVY KP FV GF+
Sbjct: 175 ELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFL 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
G+PPMNF+ A V + + +L + K E+++E + EVI G RP +DA +
Sbjct: 235 GNPPMNFVEAKVEDGKLVITEKSKLPIPKQYVEIVKETGI--TEVIIGFRP---HDAEIV 289
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH 360
+ E E IV +V E LG E+IV + + D I P+ G++ + +
Sbjct: 290 K-GEGEGIV-GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFSFGEKVTIKVKEELLV 347
Query: 361 VFNKTNERAI 370
+F+K E+A+
Sbjct: 348 LFDKKTEKAL 357
>pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog yurJ - Bacillus
subtilis >gi|2635752|emb|CAB15245.1| (Z99120) similar to
multiple sugar ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 367
Score = 354 bits (899), Expect = 9e-97
Identities = 188/374 (50%), Positives = 248/374 (66%), Gaps = 10/374 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA + +V K + VK+ L++KD E LVL+GPSGCGK+TTLRM+AGLE + G +
Sbjct: 1 MASLTFEHVKKSYHSQLTVKDFDLDVKDKELLVLVGPSGCGKSTTLRMVAGLESISEGNL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
ID + V D +PPKERD+AMVFQ+YALYPHMTV+DN+AF LKLRK+ KQEI RV
Sbjct: 61 LIDGERVND------LPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLRKMAKQEIAERV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
A +L + LLKRKP+ LSGGQRQRVALGR+I+R PKVFLMDEPLSNLDAKLRV MR
Sbjct: 115 HAAARILEIEHLLKRKPKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRT 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ KL ++L T IYVTHDQ EAMTMGDRI VMN GE+QQV P ++Y+ P N FVAGFI
Sbjct: 175 EISKLHQRLEATIIYVTHDQTEAMTMGDRIVVMNEGEIQQVAKPHDIYHYPANLFVAGFI 234
Query: 241 GSPPMNFLTATVS---SDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
GSP MNFL + + F RL + +++ + L+E G+++I G+RPE I
Sbjct: 235 GSPGMNFLKGIIEQQHGELFFTNSSIRLHIPEEKAKRLKEKGYAGEQMIAGVRPEHITQM 294
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMK 357
+ + +++ +A V++ ENLG E IVH+ GD + + ++ G ++ M
Sbjct: 295 TG-NDQLFDSVFQANVEVNENLGSELIVHVMAGDERLKVRLDGNTRIDAGDSIQLSVKMD 353
Query: 358 KAHVFNKTNERAIF 371
F+ E A++
Sbjct: 354 HVVFFDAETEEAVY 367
>pir||T45204 probable sugar ABC transporter ugpC [imported] - Mycobacterium
leprae >gi|699112|gb|AAA62878.1| (U15180) ugpC gene
product [Mycobacterium leprae]
Length = 392
Score = 353 bits (897), Expect = 2e-96
Identities = 196/386 (50%), Positives = 258/386 (66%), Gaps = 32/386 (8%)
Query: 1 MAEVKLINVWKKFGD-FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MAE+ L +V K + + TAV +LS+ + DGEFL+L+GPSGCGKTTTL MIAGLE+ + G+
Sbjct: 1 MAEIVLEHVNKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMIAGLEDISSGE 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ ID V + PK+RD+AMVFQSYALYPHMTV NIAFPL L KV K EI ++
Sbjct: 61 LRIDGDRVNEKA------PKDRDIAMVFQSYALYPHMTVRQNIAFPLMLAKVKKAEIAQK 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V E A++L LT+LL RKP +LSGGQRQRVA+GRAI+R PK FLMDEPLSNLDAKLRV+ R
Sbjct: 115 VSETAQILDLTDLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVRTR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
E+ +LQR+LG TT+YVTHDQ EAMT+GDR+ VM G +QQ+GTPDE+Y +P+N FVAGF
Sbjct: 175 GEIARLQRRLGATTVYVTHDQTEAMTLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGF 234
Query: 240 IGSPPMNFLTATVSSDGF-LDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
IGSP MNF A ++ +G L GE L L +D + + + + VI G+RPE + DA
Sbjct: 235 IGSPVMNFFPAKLTPNGLTLPLGE--LNLSRD-VQAMIGQHPVPDRVIVGVRPEHLTDAK 291
Query: 299 FIRVEEPENIV--RAKVDIVENLGGEKIVH-------------------LRLGDIIFTAK 337
I + ++ + KVD+VE+LG +K ++ L + + F A+
Sbjct: 292 LIDAHQHGTVLTFKVKVDLVESLGADKYIYFTTTGCDVYSAQLDELASELEVRENQFVAR 351
Query: 338 FPQESVVEEGQEAEVFFDMKKAHVFN 363
ES + G+ E+ F K VF+
Sbjct: 352 VSAESKMAIGESIELAFGTAKIAVFD 377
>dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.]
Length = 363
Score = 347 bits (880), Expect = 1e-94
Identities = 189/375 (50%), Positives = 253/375 (67%), Gaps = 17/375 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
+A V + NV K++ T V +SL+I+ GEF+VL+GPSGCGK+TTLRM+AGLEE + G I
Sbjct: 2 VASVSIQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTI 61
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
ID +++ D + PK+RDVAMVFQ+YALYPH+ V DNI+F L+L++ K ID V
Sbjct: 62 RIDGRVIND------LAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAV 115
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ A++LGL LL+RKP +LSGGQRQRVA+GRAI+R PKVFL DEPLSNLDAKLR +MRA
Sbjct: 116 KTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRTQMRA 175
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+K+L ++LG T IYVTHDQVEAMT+ DRI VM G ++Q+G P +++ P NTFVA FI
Sbjct: 176 EIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFI 235
Query: 241 GSPPMNFLTATVSSDGFLDF---GEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
GSPPMN + A ++ D G R+ LL L G+EV+FGIRPED+
Sbjct: 236 GSPPMNLMPARIAVDSTQHVELNGGNRISLLPRAGTHLAP----GQEVVFGIRPEDV--- 288
Query: 298 SFIRVEEPENI-VRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDM 356
+ VE E ++A VDIVE LG E I+H +GD K + V G + D+
Sbjct: 289 TLDGVEGSERAQIKATVDIVEPLGSESILHATVGDHSLVVKVGGLNEVHPGDPVTLHVDL 348
Query: 357 KKAHVFNKTNERAIF 371
+ H+F+ ++ +I+
Sbjct: 349 TRVHLFDAQSQASIY 363
>pir||E70952 probable sugC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2695824|emb|CAA15894.1| (AL021006) sugC
[Mycobacterium tuberculosis]
Length = 393
Score = 346 bits (879), Expect = 2e-94
Identities = 197/389 (50%), Positives = 257/389 (65%), Gaps = 35/389 (8%)
Query: 1 MAEVKLINVWKKFGD-FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MAE+ L +V K + D TAV++L+L I DGEFL+L+GPSGCGKTTTL MIAGLE+ + G+
Sbjct: 1 MAEIVLDHVNKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSGE 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ I + V + PK+RD+AMVFQSYALYPHMTV NIAFPL L K+ K +I ++
Sbjct: 61 LRIAGERVNEKA------PKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAKMRKADIAQK 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V E A++L LT LL RKP +LSGGQRQRVA+GRAI+R PK FLMDEPLSNLDAKLRV+MR
Sbjct: 115 VSETAKILDLTNLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
E+ +LQR+LG TT+YVTHDQ EAMT+GDR+ VM G QQ+GTP+E+Y +P N FVAGF
Sbjct: 175 GEIAQLQRRLGTTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGF 234
Query: 240 IGSPPMNFLTATVSSDGF-LDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
IGSP MNF A +++ G L FGE L + + + + + VI G+RPE I DA+
Sbjct: 235 IGSPAMNFFPARLTAIGLTLPFGEV---TLAPEVQGVIAAHPKPENVIVGVRPEHIQDAA 291
Query: 299 FIRVEEPENIV--RAKVDIVENLGGEKIVHL----------------------RLGDIIF 334
I + + + KV++VE+LG +K ++ L + F
Sbjct: 292 LIDAYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAEVEGESALHENQF 351
Query: 335 TAKFPQESVVEEGQEAEVFFDMKKAHVFN 363
A+ P ES V GQ E+ FD + VF+
Sbjct: 352 VARVPAESKVAIGQSVELAFDTARLAVFD 380
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 345 bits (876), Expect = 4e-94
Identities = 196/379 (51%), Positives = 256/379 (66%), Gaps = 21/379 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MAE++L V K+FG AV + L IKDGEF VLLGPSGCGKTTTLR+IAGLE P G+I
Sbjct: 14 MAEIRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRI 73
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRK----VPKQEI 116
ID + V F PK+R+VAMVFQ+YALYPHM+V+DNIAF L LR+ + K +I
Sbjct: 74 LIDGEDVT------FKDPKDRNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDI 127
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
RRV EVA++L + +LL RKP +LSGGQ+QRVAL RA++RRPKV+LMDEPLSNLDA LR+
Sbjct: 128 RRRVIEVAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRL 187
Query: 177 KMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFV 236
MRAELKKLQ+ L +TT+YVTHDQ EAM+M DRIAVMN+G + QVGTP+EVY +P +TFV
Sbjct: 188 AMRAELKKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEVYMRPKHTFV 247
Query: 237 AGFIGSPPMNFLTATVSSDG---FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPED 293
A FIG+PPMN + V S G ++ F ++ ++ V+E + +++ GIRPE
Sbjct: 248 ATFIGAPPMNLVECDVESVGEDLWISCPGFSRRVPEEARSVIESKGV--RKIYLGIRPEF 305
Query: 294 IYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGD-IIFTAK-FPQESVVEEGQEAE 351
I + E E + KV +VE LG E +V++ +GD II AK + G +
Sbjct: 306 I----SVSRRETEGSIAGKVYVVEPLGSEYVVNVDIGDGIIIKAKVLGLREKMTPGDKVY 361
Query: 352 VFFDMKKAHVFNKTNERAI 370
+ D K +F+ A+
Sbjct: 362 LKLDWSKVKIFDYRTGEAL 380
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 344 bits (873), Expect = 1e-93
Identities = 192/379 (50%), Positives = 253/379 (66%), Gaps = 30/379 (7%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++++N+ K FG AV +S E+KDGEF+ LLGPSGCGKTTTL M+AG+ +PT G+I
Sbjct: 1 MPSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y DD LV D +PPK R+V MVFQ+YALYPHMTV++NIAFPL+ R++ K E+++RV
Sbjct: 61 YFDDVLVND------IPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
E+A L + LL RKP +LSGGQ+QRVAL RA++++PKV L DEPLSNLDA LR+ MRA
Sbjct: 115 VEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRA 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+K LQ++LG+T++YVTHDQ EAMTM RIAV N+G+L Q GTPDEVY+ P N FVA FI
Sbjct: 175 EIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVL---EENNLIGKEVIFGIRPEDIYDA 297
G+PP NFL F E + +LK ++ E ++ KEV+ GIRPE
Sbjct: 235 GNPPTNFLR------DFSVSVENKQTILKRDDVIIKLPEPVDVKLKEVVVGIRPEHCR-- 286
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRL--GDII----FTAKFPQESVVEEGQEAE 351
I E EN + V +VE LG + IV+++ G+II T K PQ G+
Sbjct: 287 --ISRERVENSIPGVVYVVEPLGRDIIVNVKTEKGEIIKVFGDTGKAPQ-----PGENVF 339
Query: 352 VFFDMKKAHVFNKTNERAI 370
+ D++K H+FN E I
Sbjct: 340 LVPDLRKIHLFNPETEETI 358
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 343 bits (870), Expect = 2e-93
Identities = 182/370 (49%), Positives = 256/370 (69%), Gaps = 13/370 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++L N+ KKFG+F A+ ++LEIKDGEF+ LLGPSG GK+T L +AG+ +PT G+I
Sbjct: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y D++ V + +PPK+R++ +VFQ++ALYPHMTVY NIAFPL+LRK PK EID +V
Sbjct: 61 YFDERDVTE------LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
R+VA+ML + +LL R P +LSGGQ+QRVA+ RA+++ P+V L+DEPLSNLDA LR+++RA
Sbjct: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELK+LQ++LG+TTIYVTHDQ EA+ M DRIAV+ G++ QVGTPDEVY KP+ FV GF+
Sbjct: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
G+PPMNF+ A V L + + K +++E N+ K+VI G RP +DA I
Sbjct: 235 GNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNV--KDVIIGFRP---HDAEVI 289
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH 360
+ E IV +V E LG E+IV + + D I P+ G++ +
Sbjct: 290 K-GISEGIV-GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVV 347
Query: 361 VFNKTNERAI 370
+F+K +E+A+
Sbjct: 348 LFDKKSEKAL 357
>pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1000120|gb|AAB41280.1| (U32936) orf 363
[Synechocystis PCC6803] >gi|1653830|dbj|BAA18741.1|
(D90916) ATP binding protein responsible for multiple
sugar import [Synechocystis sp.]
Length = 363
Score = 340 bits (862), Expect = 2e-92
Identities = 192/376 (51%), Positives = 248/376 (65%), Gaps = 18/376 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V V K+F D+ AV L+LEI+DGEFLV +GPSGCGKTT+LR++AGLE + GQI
Sbjct: 1 MASVSFEQVTKQFDDYVAVNNLNLEIEDGEFLVFVGPSGCGKTTSLRLLAGLETVSQGQI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
I D+ V + + PK+RD+AMVFQSYALYPHM+VY+N+AF L L+ PK+EI +RV
Sbjct: 61 CIGDRRVNE------LSPKDRDIAMVFQSYALYPHMSVYENMAFSLDLQGKPKEEIRQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
AE+LG+ +LL RKP+ELSGGQRQRVA+GRAI+R+P VFLMDEPLSNLDA LRV+ R
Sbjct: 115 CSAAELLGIEKLLHRKPKELSGGQRQRVAVGRAIVRKPSVFLMDEPLSNLDAMLRVQARK 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ KL L T IYVTHDQVEAMTMGDRIAVM G LQQV +P +YN+P N FVAGFI
Sbjct: 175 EISKLHSDLATTFIYVTHDQVEAMTMGDRIAVMKDGILQQVDSPANLYNQPANLFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKE----VIFGIRPEDIYD 296
GSP MNF S E + KL D VL + + K + GIRPE+IY
Sbjct: 235 GSPAMNFFQVERLSQ------EGKEKLSLDGV-VLPMPDSVAKNGDRPLTLGIRPENIYH 287
Query: 297 ASFIRVEEPENIVRAKVDIVENLGGEKIVHLRL-GDIIFTAKFPQESVVEEGQEAEVFFD 355
++ +E + A V++VE +G E IV+ + F A+ +++ + D
Sbjct: 288 PQYLPLEIEPMELPATVNLVEMMGNELIVYAQTPAGTEFVARIDPRVNIKQKDSVKFVVD 347
Query: 356 MKKAHVFNKTNERAIF 371
++ + F++ E AIF
Sbjct: 348 TQRFYYFDREMETAIF 363
>sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCJV
>gi|7442507|pir||A64881 probable ABC-type transport
protein b1318 - Escherichia coli
>gi|1742155|dbj|BAA14893.1| (D90769) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1742163|dbj|BAA14900.1| (D90770) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1787577|gb|AAC74400.1| (AE000229) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 322
Score = 335 bits (849), Expect = 6e-91
Identities = 177/331 (53%), Positives = 232/331 (69%), Gaps = 13/331 (3%)
Query: 1 MAEVKLINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA++ L ++ K + + VK+ +LEI D EF+V +GPSGCGK+TTLRMIAGLEE + G
Sbjct: 1 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ ID K + D VP K R++AMVFQ+YALYPHMTVYDN+AF LK++K+ K+ ID R
Sbjct: 61 LLIDGKRMND------VPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDER 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V A++LGL E LKRKP LSGGQRQRVALGRAI+R VFLMDEPLSNLDAKLRV+MR
Sbjct: 115 VNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
AE+ KL ++L T IYVTHDQ EAMTM RI +M G +QQVG P VYN+P N FV+GF
Sbjct: 175 AEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGF 234
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
IGSP MNF+ T+ D F+ +L + +++ VL+ + K ++ GIRPEDI+ +
Sbjct: 235 IGSPAMNFIRGTIDGDKFVT-ETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDA- 292
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLG 330
+ EN + AK+ + E G E +++ +G
Sbjct: 293 ----QEENNISAKISVAELTGAEFMLYTTVG 319
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 331 bits (839), Expect = 1e-89
Identities = 183/334 (54%), Positives = 231/334 (68%), Gaps = 27/334 (8%)
Query: 1 MAEVKLINVWKKFGD------FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEE 54
M V+L +V + FG T V +++L I +GEF V+LGPSG GK+T LR+IAGLE+
Sbjct: 1 MTVVRLEHVTRDFGKNSPNGPHTGVFDINLTINNGEFFVILGPSGSGKSTMLRIIAGLEK 60
Query: 55 PTIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQ 114
G I++D+ + D PPK+RD+AMVFQ+YALYP MTVYDNIAFPLK++K+ KQ
Sbjct: 61 VDSGHIFLDEYEITD------FPPKDRDMAMVFQNYALYPFMTVYDNIAFPLKIQKISKQ 114
Query: 115 EIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKL 174
EID RVREVA++L + +L KP ++SGGQRQRVALGRAIIRRP VFLMDEPLSNLDAKL
Sbjct: 115 EIDERVREVAKLLDIEGILNMKPGQISGGQRQRVALGRAIIRRPAVFLMDEPLSNLDAKL 174
Query: 175 RVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNT 234
R MR ELKKL QLG+TTIYVTHDQ+EAMT+ DR+ V+NRG L QVG P +VY+ P NT
Sbjct: 175 RGTMRVELKKLHEQLGITTIYVTHDQIEAMTLADRVGVINRGNLIQVGGPMDVYDSPANT 234
Query: 235 FVAGFIGSPPMNFLTATVSSDG---FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRP 291
F+AGF+G PP+NF+ T+ ++G L EF+L ++ +E EV GIRP
Sbjct: 235 FIAGFVGDPPINFIDGTIVTEGRDKILRINEFKL-------DIGQEFPDNVAEVTVGIRP 287
Query: 292 EDIYDASFIRVEEPENIV-----RAKVDIVENLG 320
EDI + V E E I R + IV+N G
Sbjct: 288 EDIGEGDEGFVAELEAIQPLGRRRLEYYIVKNTG 321
>gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other inner membrane ATP
binding transport proteins [Escherichia coli]
Length = 322
Score = 329 bits (835), Expect = 3e-89
Identities = 175/331 (52%), Positives = 230/331 (68%), Gaps = 13/331 (3%)
Query: 1 MAEVKLINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA++ L ++ K + + VK+ +LEI D EF+V + SGCGK+TTLRMIAGLEE + G
Sbjct: 1 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVAASGCGKSTTLRMIAGLEEISGGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ ID K + D VP K R++AMVFQ+YALYPHMTVYDN+AF LK++K+ K+ ID R
Sbjct: 61 LLIDGKRMND------VPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDER 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V A++LGL E LKRKP LSGGQRQRVALGRAI+R VFLMDEPLSNLDAKLRV+MR
Sbjct: 115 VNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
AE+ KL ++L T IYVTHDQ EAMTM RI +M G +QQVG P VYN+P N FV+GF
Sbjct: 175 AEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGF 234
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
IGSP MNF+ T+ D F+ +L + +++ VL+ + K ++ GIRPEDI+ +
Sbjct: 235 IGSPAMNFIRGTIDGDKFVT-ETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDA- 292
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLG 330
+ EN + AK+ + E G E +++ +G
Sbjct: 293 ----QEENNISAKISVAELTGAEFMLYTTVG 319
>pir||F71279 probable sugar ABC transporter, ATP-binding protein (ugpC) -
syphilis spirochete >gi|3323114|gb|AAC65771.1|
(AE001251) sugar ABC transporter, ATP-binding protein
(ugpC) [Treponema pallidum]
Length = 387
Score = 325 bits (825), Expect = 4e-88
Identities = 183/375 (48%), Positives = 241/375 (63%), Gaps = 13/375 (3%)
Query: 1 MAEVKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA+V+L ++ K + G AVK++++ + GEF+V +GPSGCGK+T LR+IAGLE+ G
Sbjct: 1 MAKVELKHICKTYHGCVHAVKDVTITAESGEFVVFIGPSGCGKSTALRIIAGLEDICSGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+YID E V PK+R++AMVFQ+YALYPHM V+DN+AF L++RK+P+QEI RR
Sbjct: 61 LYIDG------EHMNHVTPKDRNIAMVFQNYALYPHMNVFDNMAFGLRIRKIPQQEIIRR 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V E A +L + LL RKP+ LSGGQRQRVA+GRAI+R PKVFL DEPLSNLDAKLRV+MR
Sbjct: 115 VHEAARVLDIEPLLARKPKALSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+E+ L ++L T IYVTHDQ+EAMTM D+I +M G +QQ+G+P +Y P NTFVA F
Sbjct: 175 SEISLLHKRLKATMIYVTHDQMEAMTMADKIVIMKDGCVQQIGSPLHIYQHPANTFVAQF 234
Query: 240 IGSPPMNFLTATVSSDGF---LDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYD 296
IGSPPMN T+ D +D G F L+ D N IG +V+FG+RPE I
Sbjct: 235 IGSPPMNCFPVTIVKDEHGIKIDAGLFVLR--PDIPASFLLKNYIGTQVVFGLRPEAITP 292
Query: 297 -ASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
E N+++ KV VE LG E V+L G A+ EG + D
Sbjct: 293 RTEETLARECANVIQLKVLAVEALGAETFVYLDAGVQPIVARCNHTLTAHEGTLLTLALD 352
Query: 356 MKKAHVFNKTNERAI 370
+ KA F+ A+
Sbjct: 353 LSKALYFDAETGHAL 367
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 322 bits (817), Expect = 4e-87
Identities = 182/364 (50%), Positives = 244/364 (67%), Gaps = 19/364 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M +V + NV K++G T + +LS I+DGEF+VL+GPSGCGK+T LRM+AGLEE + G +
Sbjct: 17 MTDVTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGLEEISGGDL 76
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ ++ D P KERD+A+VFQ+YALYPHMTV +N+ F LKLRK P+ EID RV
Sbjct: 77 LMGADVINDR------PAKERDMAIVFQNYALYPHMTVAENMGFALKLRKRPRAEIDERV 130
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ A +LGL +LL R PR LSGGQRQRVA+GRAI+R P+VFL DEPLSNLDAKLRV+MRA
Sbjct: 131 DKAAAILGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRA 190
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+K L ++L +TT+YVTHDQ+EAMTM D+I VMN G ++Q+GTP E+Y++P N FVAGFI
Sbjct: 191 EIKALHQRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDRPANIFVAGFI 250
Query: 241 GSPPMNFLTATV-SSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
GSP MNFL ATV +++G L + L D L + EV +GIRPE
Sbjct: 251 GSPSMNFLPATVAATNGPLLKTPEGVALPIDGGPTLTGRS----EVTYGIRPE------- 299
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
++ E + A+V +VE G E +++ +G A V G++ + A
Sbjct: 300 -HLQLGETGIPAEVVVVEPTGSETQLYVTVGGREVVAVLRDRVDVRPGEKIWLTPRKGCA 358
Query: 360 HVFN 363
H+F+
Sbjct: 359 HLFD 362
>pir||S77405 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1652587|dbj|BAA17508.1| (D90906) cytoplasmic
membrane protein for maltose uptake [Synechocystis sp.]
Length = 408
Score = 321 bits (814), Expect = 8e-87
Identities = 187/418 (44%), Positives = 253/418 (59%), Gaps = 61/418 (14%)
Query: 1 MAEVKLINVWKKF-----------GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMI 49
MA+V + N++K F G +K ++LEI DGEF+VL+GPSGCGK+T LR+I
Sbjct: 1 MAQVIVENLYKSFPAQGKNKAKDGGTVNVLKAINLEIADGEFMVLVGPSGCGKSTLLRLI 60
Query: 50 AGLEEPTIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLK-- 107
AGLE T G I I D+ V D +PPK RD+AMVFQSYALYPH++VYDNIAF L+
Sbjct: 61 AGLETVTGGNILIGDRRVND------LPPKARDIAMVFQSYALYPHLSVYDNIAFGLRRM 114
Query: 108 -------------------LRKVPK-------------QEIDRRVREVAEMLGLTELLKR 135
LR + K + + +RV +VA+ L + LL R
Sbjct: 115 LDRENNQTEDKFPRWVGDSLRGITKPLPKSLHYLSAQEKVLAQRVNQVAQQLQIDHLLDR 174
Query: 136 KPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIY 195
P++LSGGQ+QRVALGRAI R P+VFLMDEPLSNLDAKLR + R+++ ++QRQLG TTIY
Sbjct: 175 LPKQLSGGQKQRVALGRAIARNPQVFLMDEPLSNLDAKLRAETRSQIVQIQRQLGTTTIY 234
Query: 196 VTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSD 255
VTHDQ EAMTMGDRIAV+N+G +QQ+ P +YN+P N FV FIGSPPMNF T V+S
Sbjct: 235 VTHDQTEAMTMGDRIAVLNQGVIQQIAPPLTLYNQPANRFVGEFIGSPPMNFFTLKVASA 294
Query: 256 GFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPENIVRAKVDI 315
L F L L + ++ +G+ +I G+RPE SFI E N V++
Sbjct: 295 SVLQHPAFALNLPEKWHGLVAP--YVGRSLILGVRPE-----SFIPSTEGSNAFPVTVNL 347
Query: 316 VENLGGEKIVHLRL---GDIIFTAKFPQESVVEEGQEAEVFFDMKKAHVFNKTNERAI 370
VE LG + ++ L D+ A+ + ++ G++ + + +K H+F+ E+AI
Sbjct: 348 VEALGNDTFIYAHLVTEPDLTIQARIAPDHPLQVGEQLWLTINPEKIHLFDAKTEQAI 405
>pir||S63613 probable ATP-binding protein cymD - Klebsiella oxytoca
>gi|854231|emb|CAA60003.1| (X86014) cymD [Klebsiella
oxytoca]
Length = 376
Score = 319 bits (808), Expect = 4e-86
Identities = 182/378 (48%), Positives = 243/378 (64%), Gaps = 21/378 (5%)
Query: 1 MAEVKLINVWKKFGD-FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA V L + K++ + F AV + LEI DGEF+V +GPSGC K+TTLRMIAGLE+ + G+
Sbjct: 1 MATVSLRKIEKRYENGFKAVHGIDLEIHDGEFMVFVGPSGCAKSTTLRMIAGLEDISGGE 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
IYI ++ V D +PPK+R +AMVFQ+YALYPH TV+DN+AF LK++K PK EI RR
Sbjct: 61 IYIGNRKVND------LPPKDRGIAMVFQNYALYPHKTVFDNMAFGLKMQKRPKDEIKRR 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V + AE L +TELL RKP+E+SGGQRQRVA+GRAI+R+P VFL DEPLSNLDAKLRV MR
Sbjct: 115 VEDAAEKLEITELLYRKPKEMSGGQRQRVAVGRAIVRKPDVFLFDEPLSNLDAKLRVSMR 174
Query: 180 AELKKLQRQL-----GVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNT 234
++ +L R L T IYVTHDQ EA+T+GDRI V+N G + QV TP ++YN P N
Sbjct: 175 MKIAQLHRSLKEEGHPATMIYVTHDQTEALTLGDRICVLNHGNIMQVDTPTDLYNYPNNK 234
Query: 235 FVAGFIGSPPMNFLTATVSSDG---FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRP 291
FVA FIGSP +N + + + +++ L+ +VL E I K V FGIRP
Sbjct: 235 FVASFIGSPSINLIDTAIRKNNERLYVEIAPGVEILIPHSKQVLLE-GYINKPVCFGIRP 293
Query: 292 EDIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAE 351
E I S ++ N + +VEN+G EK ++ +G A+ + +
Sbjct: 294 EHI---SLASDDDDLNTFEGVLTVVENMGSEKFLYFIVGGKELIARVDTQDINPFHIGKT 350
Query: 352 VFFDMKKA--HVFNKTNE 367
+ F++ A HVF+ NE
Sbjct: 351 LRFNLNTAFCHVFDFYNE 368
>pir||E83248 probable ATP-binding component of ABC transporter PA3187 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949305|gb|AAG06575.1|AE004742_11 (AE004742)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 386
Score = 314 bits (797), Expect = 8e-85
Identities = 170/370 (45%), Positives = 240/370 (63%), Gaps = 21/370 (5%)
Query: 1 MAEVKLINVWKKFGDFTA--VKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
MA ++L N+ K +G A ++++ L+I GEFL+L+GPSGCGK+T + IAGLE T G
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
I +D + ++ + PK+RD+AMVFQSYALYP M+V +NIAF LK+RK+P+ ID
Sbjct: 61 AILVDGQDISG------MSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDE 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
V VA +L + LL+RKP +LSGGQ+QRVA+GRA+ RRPKV+L DEPLSNLDAKLRV+M
Sbjct: 115 EVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEPLSNLDAKLRVEM 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R ELK + ++L TT+YVTHDQ+EAMT+GD++AVM G +QQ GTP ++YN P N FVA
Sbjct: 175 RTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPANLFVAS 234
Query: 239 FIGSPPMNFLTATVSS-----DGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPED 293
FIGSPPMNF+ + G LD G+ R++L LEE G+E+I G+RPE
Sbjct: 235 FIGSPPMNFIPLRLQRRDGRWTGLLDSGQDRIELPLSLEPGLEE----GRELILGVRPEQ 290
Query: 294 IYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVF 353
I + +R +V+++E G + +V + + + + + G +
Sbjct: 291 IALGDGSAAHD----LRTEVEVLEPTGPDTLVFVTVNQVKVCCRLAPDVAPAAGSGMSLR 346
Query: 354 FDMKKAHVFN 363
FD + +F+
Sbjct: 347 FDPARVLLFD 356
>emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli]
Length = 377
Score = 314 bits (797), Expect = 8e-85
Identities = 180/369 (48%), Positives = 242/369 (64%), Gaps = 26/369 (7%)
Query: 15 DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGI 74
D AV +L + I+DGEFLVL+GPSGCGK+T+LRM+AGLE+ G I I D+ V
Sbjct: 17 DKPAVDQLDIAIEDGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTH----- 71
Query: 75 FVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLK 134
+PPK+RD+AMVFQ+YALYPHMTV DN+ F LK+ VPK EI ++V E A++L LT+ L
Sbjct: 72 -LPPKDRDIAMVFQNYALYPHMTVADNMGFALKIAGVPKAEIRQKVEEAAKILDLTQYLD 130
Query: 135 RKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTI 194
RKP+ LSGGQRQRVA+GRAI+R P+VFLMDEPLSNLDAKLRV R ++ LQR+LG+TT+
Sbjct: 131 RKPKALSGGQRQRVAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTV 190
Query: 195 YVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSS 254
YVTHDQVEAMTMGDR+AV+ G LQQV +P +Y+KP N FVAGFIGSP MN + + +
Sbjct: 191 YVTHDQVEAMTMGDRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPI-T 249
Query: 255 DGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE--DIYD------ASFIR--VEE 304
DG + FG + + ++ ++ + + V G+RPE D+ + AS + +
Sbjct: 250 DGGVKFGNSVVPVNREALSAADKGD---RTVTVGVRPEHFDVVELGGAVAASLSKDSADA 306
Query: 305 PENIVRAKVDIVENLGGEKIVH--LRLGDII--FTAKFPQESVVEEGQEAEVFFDMKKAH 360
P + V++VE LG + V+ +G + + V E+G V + H
Sbjct: 307 PAGLA-VSVNVVEELGADGYVYGTAEVGGEVKDLVVRVNGRQVPEKGSTLHVVPRPGETH 365
Query: 361 VFN-KTNER 368
VF+ T ER
Sbjct: 366 VFSTSTGER 374
>pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding protein VCA0946
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9658383|gb|AAF96842.1| (AE004421)
maltose/maltodextrin ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 373
Score = 314 bits (795), Expect = 1e-84
Identities = 178/379 (46%), Positives = 236/379 (61%), Gaps = 41/379 (10%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V L NV K +GD K + LEI++GEF+V +GPSGCGK+T LR IAGLE+ T G +
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YI ++ + D E P +R V MVFQSYALYPH+ +YDN++F LKL K K EI +RV
Sbjct: 61 YIGEQRMNDVE------PSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
AE+L L+ LL R+P+ LSGGQRQRVA+GR ++ +P VFL+DEPLSNLDA LRV+MR+
Sbjct: 115 DHAAEILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRS 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ KLQR+LG T IYVTHDQVEAMTM D+I V++ G + QVG P E+Y+ P N FVAGFI
Sbjct: 175 EITKLQRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLI------------GKEVIFG 288
GSP MNF++ + + KD+ +V N G+ + G
Sbjct: 235 GSPKMNFMSVFIEG------------VEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLG 282
Query: 289 IRPEDIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRL----GDIIFTAKFPQESVV 344
IRPE + +A E + + KV IVE LG E V++ L D+I+ + P V
Sbjct: 283 IRPEHLVEA-----EHGDAKIEGKVMIVEKLGNETQVYMNLKGSDSDVIY--RQPDTLDV 335
Query: 345 EEGQEAEVFFDMKKAHVFN 363
E G + + H+F+
Sbjct: 336 ETGDTLTIGIPAHRCHLFH 354
>gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae]
Length = 373
Score = 314 bits (795), Expect = 1e-84
Identities = 178/379 (46%), Positives = 236/379 (61%), Gaps = 41/379 (10%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V L NV K +GD K + LEI++GEF+V +GPSGCGK+T LR IAGLE+ T G +
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YI ++ + D E P +R V MVFQSYALYPH+ +YDN++F LKL K K EI +RV
Sbjct: 61 YIGEQRMNDVE------PSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
AE+L L+ LL R+P+ LSGGQRQRVA+GR ++ +P VFL+DEPLSNLDA LRV+MR+
Sbjct: 115 DHAAEILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRS 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ KLQR+LG T IYVTHDQVEAMTM D+I V++ G + QVG P E+Y+ P N FVAGFI
Sbjct: 175 EITKLQRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLI------------GKEVIFG 288
GSP MNF++ + + KD+ +V N G+ + G
Sbjct: 235 GSPKMNFMSVFIEG------------VEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLG 282
Query: 289 IRPEDIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRL----GDIIFTAKFPQESVV 344
IRPE + +A E + + KV IVE LG E V++ L D+I+ + P V
Sbjct: 283 IRPEHLVEA-----EHGDAKIEGKVMIVEKLGNETQVYMNLKGSDSDVIY--RQPDTLDV 335
Query: 345 EEGQEAEVFFDMKKAHVFN 363
E G + + H+F+
Sbjct: 336 ETGDTLTIGIPAHRCHLFH 354
>pir||MMECMK inner membrane protein malK - Escherichia coli
>gi|409797|gb|AAC43129.1| (U00006) cytoplasmic membrane
protein for maltose uptake [Escherichia coli]
>gi|1790467|gb|AAC77005.1| (AE000476) ATP-binding
component of transport system for maltose [Escherichia
coli K12]
Length = 371
Score = 313 bits (793), Expect = 2e-84
Identities = 172/369 (46%), Positives = 238/369 (63%), Gaps = 17/369 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L NV K +G+ K+++L+I +GEF+V +GPSGCGK+T LRMIAGLE T G +
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I +K + D PP ER V MVFQSYALYPH++V +N++F LKL K+ I++RV
Sbjct: 61 FIGEKRMND------TPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+VAE+L L LL RKP+ LSGGQRQRVA+GR ++ P VFL+DEPLSNLDA LRV+MR
Sbjct: 115 NQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRI 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L ++LG T IYVTHDQVEAMT+ D+I V++ G + QVG P E+Y+ P + FVAGFI
Sbjct: 175 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQ---FEVLEENNLIGKEVIFGIRPEDIYDA 297
GSP MNFL V++ +D + L + Q V + +G + GIRPE + +
Sbjct: 235 GSPKMNFLPVKVTATA-IDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPS 293
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESV--VEEGQEAEVFFD 355
V I+ +V +VE LG E +H+++ I + Q V VEEG +
Sbjct: 294 DIADV-----ILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLP 348
Query: 356 MKKAHVFNK 364
++ H+F +
Sbjct: 349 PERCHLFRE 357
>pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protein - Escherichia
coli >gi|912455|gb|AAB18425.1| (U00039) CG Site No.
17794 [Escherichia coli] >gi|1789859|gb|AAC76475.1|
(AE000421) ATP-binding component of sn-glycerol
3-phosphate transport system [Escherichia coli K12]
Length = 369
Score = 312 bits (792), Expect = 3e-84
Identities = 179/372 (48%), Positives = 241/372 (64%), Gaps = 21/372 (5%)
Query: 1 MAEVKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA +KL V K + G +K L+L++ DGEF+V++GPSGCGK+T LRM+AGLE T G
Sbjct: 14 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGD 73
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
I+I+D+ V + E PK+R +AMVFQ+YALYPHM+V +N+A+ LK+R + KQ+I R
Sbjct: 74 IWINDQRVTEME------PKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAER 127
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V+E A +L L LLKR+PRELSGGQRQRVA+GRAI+R P VFL DEPLSNLDAKLRV+MR
Sbjct: 128 VKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMR 187
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
EL++L R+L T++YVTHDQVEAMT+ R+ VMN G +Q+GTP EVY KP + FVA F
Sbjct: 188 LELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASF 247
Query: 240 IGSPPMNFLTATVSSDG--FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
IGSP MN LT V+++G F G L L G+++ GIRPE I +
Sbjct: 248 IGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGY------RQYAGRKMTLGIRPEHIALS 301
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMK 357
S + E V +D +E LG + + H R G+ + + G +
Sbjct: 302 S-----QAEGGVPMVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAEN 356
Query: 358 KAHVFN-KTNER 368
+ H+F+ +T +R
Sbjct: 357 QLHLFDGETGQR 368
>sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDING PROTEIN UGPC
>gi|43249|emb|CAA31534.1| (X13141) ugpC protein (AA
1-356) [Escherichia coli]
Length = 356
Score = 312 bits (792), Expect = 3e-84
Identities = 179/372 (48%), Positives = 241/372 (64%), Gaps = 21/372 (5%)
Query: 1 MAEVKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA +KL V K + G +K L+L++ DGEF+V++GPSGCGK+T LRM+AGLE T G
Sbjct: 1 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGD 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
I+I+D+ V + E PK+R +AMVFQ+YALYPHM+V +N+A+ LK+R + KQ+I R
Sbjct: 61 IWINDQRVTEME------PKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAER 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V+E A +L L LLKR+PRELSGGQRQRVA+GRAI+R P VFL DEPLSNLDAKLRV+MR
Sbjct: 115 VKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
EL++L R+L T++YVTHDQVEAMT+ R+ VMN G +Q+GTP EVY KP + FVA F
Sbjct: 175 LELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASF 234
Query: 240 IGSPPMNFLTATVSSDG--FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
IGSP MN LT V+++G F G L L G+++ GIRPE I +
Sbjct: 235 IGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGY------RQYAGRKMTLGIRPEHIALS 288
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMK 357
S + E V +D +E LG + + H R G+ + + G +
Sbjct: 289 S-----QAEGGVPMVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAEN 343
Query: 358 KAHVFN-KTNER 368
+ H+F+ +T +R
Sbjct: 344 QLHLFDGETGQR 355
>sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
Length = 371
Score = 310 bits (786), Expect = 2e-83
Identities = 171/369 (46%), Positives = 237/369 (63%), Gaps = 17/369 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L NV K +G+ K+++L+I +GEF+V +GPSGCGK+T LRMIAGLE T G +
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I +K + D PP ER V MVFQSYALYPH++V +N++F LK K+ I++RV
Sbjct: 61 FIGEKRMND------TPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+VAE+L L LL RKP+ LSGGQRQRVA+GR ++ P VFL+DEPLSNLDA LRV+MR
Sbjct: 115 NQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRI 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L ++LG T IYVTHDQVEAMT+ D+I V++ G + QVG P E+Y+ P + FVAGFI
Sbjct: 175 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQ---FEVLEENNLIGKEVIFGIRPEDIYDA 297
GSP MNFL V++ +D + L + Q V + +G + GIRPE + +
Sbjct: 235 GSPKMNFLPVKVTATA-IDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPS 293
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESV--VEEGQEAEVFFD 355
V I+ +V +VE LG E +H+++ I + Q V VEEG +
Sbjct: 294 DIADV-----ILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLP 348
Query: 356 MKKAHVFNK 364
++ H+F +
Sbjct: 349 PERCHLFRE 357
>gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport system ATP-binding;
UgpC [Halobacterium sp. NRC-1]
Length = 379
Score = 309 bits (782), Expect = 5e-83
Identities = 171/374 (45%), Positives = 231/374 (61%), Gaps = 13/374 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ + L ++ K + AV + L++ D EFLV++GPSGCGK+TTLR+IAGLE+ T G I
Sbjct: 1 MSTITLTDLTKHYDSIAAVDGIDLDVLDEEFLVVVGPSGCGKSTTLRLIAGLEDATAGTI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLK-LRKVPKQEIDRR 119
I V D PP++RD+AMVFQ+YALYPHMT +N+ F ++ + EI+ R
Sbjct: 61 RIGGTDVTDS------PPEDRDIAMVFQNYALYPHMTAAENMTFGMQSVTDYSSAEIEDR 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V + A LG+TELL R P LSGG+RQRVA+GRA++R P VFL+DEPLSNLDAKLRV MR
Sbjct: 115 VADAAATLGITELLDRTPDALSGGERQRVAIGRALVREPSVFLLDEPLSNLDAKLRVHMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
AEL KL R+L TT+YVTHDQ EAMT+GDR+AV+N G +QQV P ++Y+ P N FVAGF
Sbjct: 175 AELSKLHRELDTTTVYVTHDQTEAMTLGDRVAVLNDGTVQQVAPPQQLYDFPANQFVAGF 234
Query: 240 IGSPPMNFLTATVSS--DGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
IG P MN + V G + E L D + L+ + + FG+RPED+ A
Sbjct: 235 IGEPAMNLVPVRVRDRPRGLVADHEGFAHPLPDGG---SNSALVDRRLTFGVRPEDVLLA 291
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMK 357
E+ A+V + E LG + ++H +GD K V G + FD +
Sbjct: 292 GRSATGHEESF-EARVTVREPLGEQLLLHCTIGDDELQVKVQPRRDVSTGDTIRLCFDQQ 350
Query: 358 KAHVFNKTNERAIF 371
+ H+F+ AI+
Sbjct: 351 RLHLFDPETGDAIY 364
>emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycobacterium leprae]
Length = 356
Score = 308 bits (781), Expect = 6e-83
Identities = 176/376 (46%), Positives = 236/376 (61%), Gaps = 30/376 (7%)
Query: 1 MAEVKLINVWKKFGDFT--AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
MA V ++F D A+ L L++ DGEF+V++GPSGCGKTT+LRM+AGLE G
Sbjct: 1 MASVTFEQATRQFPDTDRPALDRLDLDVDDGEFVVVVGPSGCGKTTSLRMVAGLETLDSG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
I I D+ V V PK+RDVAMVFQ+YALYPHMTV N+ F LK+ K+ K EI
Sbjct: 61 CIRIGDRDVTH------VDPKDRDVAMVFQNYALYPHMTVAQNLGFALKISKISKAEIHD 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
R+ VA++L L L RKP++LSGGQRQRVA+GRAI+RRP+VFLMDEPLSNLDAKLR +
Sbjct: 115 RILVVAKLLDLQPYLDRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRAQT 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R ++ +LQ QLG TT+YVTHDQVEAMTMGDR+AV+ G LQQ TP E+Y+KP N FVAG
Sbjct: 175 RNQIAELQCQLGTTTVYVTHDQVEAMTMGDRVAVLCYGVLQQFATPRELYHKPENVFVAG 234
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
FIGSP MN +T ++ L G++ +++ + E EVI G+RPE ++
Sbjct: 235 FIGSPGMNLVTLSIVDSSVL-LGDWPIRIPR-------EIASAASEVIIGVRPEH-FELG 285
Query: 299 FIRVEEPENIVRAKVDIVENLGGEKIVHLRLG------DIIFTAKFPQESVVEEGQEAEV 352
+ VE ++D+VE LG + ++ R+ D + A+ + +G +
Sbjct: 286 SLGVE-------VEIDMVEELGADAYLYGRIAGASKVTDQLVVARVDGRNPPAKGSRVRL 338
Query: 353 FFDMKKAHVFNKTNER 368
+ + H F R
Sbjct: 339 YTEPGNVHFFGVDGHR 354
>sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|2052275|emb|CAA38188.1| (X54292) malK [Salmonella
typhimurium]
Length = 369
Score = 308 bits (780), Expect = 8e-83
Identities = 168/367 (45%), Positives = 239/367 (64%), Gaps = 15/367 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L NV K +GD K+++L+I DGEF+V +GPSGCGK+T LRMIAGLE T G +
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I + + D +PP ER V MVFQSYALYPH++V +N++F LKL K+ +++RV
Sbjct: 61 FIGETRMND------IPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVMNQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+VAE+L L LL+RKP+ LSGGQRQ VA+GR ++ P+VFL+DEPLSNLDA LRV+MR
Sbjct: 115 NQVAEVLQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRI 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L ++LG T IYVTHDQVEAMT+ D+I V++ G + QVG P E+Y+ P + FVAGFI
Sbjct: 175 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-IGKEVIFGIRPEDIYDASF 299
GSP MNFL V++ ++ + L + + +E + +G + GIRPE + +
Sbjct: 235 GSPKMNFLPVKVTATA-IEQVQVELPNRQQIWLPVESRGVQVGANMSLGIRPEHLLPSDI 293
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESV--VEEGQEAEVFFDMK 357
V + +V +VE LG E +H+++ I + Q V VEEG + +
Sbjct: 294 ADV-----TLEGEVQVVEQLGHETQIHIQIPAIRQNLVYRQNDVVLVEEGATFAIGLPPE 348
Query: 358 KAHVFNK 364
+ H+F +
Sbjct: 349 RCHLFRE 355
>emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [Streptomyces
coelicolor A3(2)]
Length = 378
Score = 308 bits (780), Expect = 8e-83
Identities = 177/368 (48%), Positives = 239/368 (64%), Gaps = 29/368 (7%)
Query: 18 AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVP 77
AV L ++I DGEFLVL+GPSGCGK+T+LRM+AGLE+ G I I D+ V +P
Sbjct: 20 AVDGLDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTH------LP 73
Query: 78 PKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKP 137
PK+RD+AMVFQ+YALYPHM+V DN+ F LK+ V K EI ++V E A++L LTE L RKP
Sbjct: 74 PKDRDIAMVFQNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKP 133
Query: 138 RELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVT 197
+ LSGGQRQRVA+GRAI+R P+VFLMDEPLSNLDAKLRV R ++ LQR+LG+TT+YVT
Sbjct: 134 KALSGGQRQRVAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVT 193
Query: 198 HDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDGF 257
HDQVEAMTMGDR+AV+ G LQQV +P +Y+KP N FVAGFIGSP MN + + +DG
Sbjct: 194 HDQVEAMTMGDRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPI-TDGG 252
Query: 258 LDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE--DIYD--------ASFIRVEEPEN 307
+ FG + + +D + + + V G+RPE D+ + S + P
Sbjct: 253 VKFGNSVVPVNRDALKAASDKG--DRTVTVGVRPEHFDVVELNGGAAKTLSKDSADAPAG 310
Query: 308 IVRAKVDIVENLGGEKIVH--LRLG----DIIFTAKFPQESVVEEGQEAEVFFDMKKAHV 361
+ V++VE G + ++ + +G D++ + +V E+G V + HV
Sbjct: 311 LA-VSVNVVEETGADGYIYGTVEVGGETKDLV--VRVSSRAVPEKGATVHVVPRPGEIHV 367
Query: 362 F-NKTNER 368
F + T ER
Sbjct: 368 FSSSTGER 375
>dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 378
Score = 306 bits (775), Expect = 3e-82
Identities = 171/341 (50%), Positives = 229/341 (67%), Gaps = 17/341 (4%)
Query: 1 MAEVKLINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
M+ V+L+N+ K + T AV+++++ IK+GEF +L+GPSGCGK+T LRMIAGLE+ + G+
Sbjct: 1 MSHVELLNLCKSYDQTTFAVEDINVSIKEGEFFILVGPSGCGKSTMLRMIAGLEDISAGE 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ I +PP +R+++MVFQ+YALYPH+TV +NI F LK+RKV K E R
Sbjct: 61 LKIHGATANH------LPPSKRNLSMVFQNYALYPHLTVEENILFGLKVRKVKKAERSER 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ A MLGLT+ LKRKPRELSGGQRQRVAL RA++ + LMDEPLSNLDAKLR MR
Sbjct: 115 CQRAAAMLGLTDYLKRKPRELSGGQRQRVALARAVVSEAPLCLMDEPLSNLDAKLRGHMR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
E+++LQRQLG+T IYVTHDQVEAMTMGDRI V+ G++QQVG+P ++YN P N FVA F
Sbjct: 175 TEIRQLQRQLGMTMIYVTHDQVEAMTMGDRIMVLKDGQVQQVGSPLDIYNAPANLFVATF 234
Query: 240 IGSPPMNFLTATVS-SDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
IG+PPMN ATV + L G RL + + + + V GIRPE I A
Sbjct: 235 IGAPPMNIAKATVDRMNRELAIGSLRLPIEEQLLMRISSDT-----VQLGIRPEQIARAD 289
Query: 299 FIRVEEPENIV-RAKVDIVENLGGEKIVHLRLGDIIFTAKF 338
PE++ + VE LG E ++ ++G+ + AK+
Sbjct: 290 ---APTPEHVQWHVTLTNVEVLGNETLLAFKVGEHEWKAKW 327
>pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding protein VC1552
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9656059|gb|AAF94706.1| (AE004233)
glycerol-3-phosphate ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 393
Score = 305 bits (772), Expect = 7e-82
Identities = 174/362 (48%), Positives = 236/362 (65%), Gaps = 33/362 (9%)
Query: 18 AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVP 77
AVK + L I GEF+VL+GPSGCGK++ LR IAGLE T G+I++ + V D EK
Sbjct: 38 AVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIHLAGRRV-DNEK----- 91
Query: 78 PKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKP 137
P RD+AMVFQ+YALYPHM+VYDN+A+ LK R V KQ I ++ +VA+ L + E L RKP
Sbjct: 92 PANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLKIEEYLDRKP 151
Query: 138 RELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVT 197
+LSGGQRQRVA+GRAI+R P++FL DEPLSNLDA LR MR E+KKLQR+LGVT++YVT
Sbjct: 152 AKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRELGVTSVYVT 211
Query: 198 HDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDGF 257
HDQVEAMT+ DRI V+ +GE++QVGTP EVY++P +TFVA FIGSP MNFL A++
Sbjct: 212 HDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNFLPASIKQGQL 271
Query: 258 LDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPENIVRAKVDI-- 315
G+ QF+ + N + GIRPE + N + K+DI
Sbjct: 272 HIAGK---HCYLPQFDAMSSEN-----ITLGIRPE------HASLHPLTNAIELKLDIQV 317
Query: 316 VENLGGEKIVHLRL-------GDIIFTAKFPQESVVEEGQEAEVFFDMKKAHVFNKTNER 368
VE LG ++VH ++ I TA+ P ++ Q ++ +++ H+F++ +R
Sbjct: 318 VEPLGPNQLVHGKIIGLESEQDFIAVTAEIP----LDVHQTLPIWVALEQLHLFDQQGKR 373
Query: 369 AI 370
+
Sbjct: 374 FV 375
>pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106014|gb|AAF83877.1|AE003943_8 (AE003943) sugar
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 364
Score = 303 bits (767), Expect = 3e-81
Identities = 169/368 (45%), Positives = 236/368 (63%), Gaps = 19/368 (5%)
Query: 1 MAEVKLINVWKKFGDF-TAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
MA+V+L + K + + V +S E+ DGE +VL+GPSGCGK+T LRMIAGLE+ + G
Sbjct: 1 MAKVQLEAIRKVYDNGQVVVPGVSFEVADGELMVLVGPSGCGKSTLLRMIAGLEDISSGT 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
+ I +++V D VPPK+R+VAMVFQSYALYPHMT +N+AF LKLR + I R
Sbjct: 61 LRIGERVVND------VPPKDRNVAMVFQSYALYPHMTAAENLAFGLKLRGYSTEAIAER 114
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
++ VAEMLGLT LL P+ +SGGQRQRVALGRA++R VFL+DEPLSNLDAKLR +R
Sbjct: 115 IKNVAEMLGLTSLLDTLPKAMSGGQRQRVALGRAMVRESAVFLLDEPLSNLDAKLRNSVR 174
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+++ +L R+LG T IYVTHDQVEAMT+G RI ++ G +QQ+ TP +Y+ P N FVAGF
Sbjct: 175 SDITRLHRKLGTTMIYVTHDQVEAMTLGHRIVLLKDGVIQQIDTPMVLYDHPANLFVAGF 234
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQ----FEVLEENNLIGKEVIFGIRPEDIY 295
+G+P MN L + + G L L + + ++ G++V+ G+RPE I
Sbjct: 235 LGNPAMNMLPGRLEAVA----GGMELHLESGECVMFVGAIPKSVWFGRDVVLGVRPEHIR 290
Query: 296 DASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
A + EP + A V+ +E +G E +HLR G + T + P + + G+ +
Sbjct: 291 PAG---LGEPV-ALEATVEALEPVGNEVFLHLRCGALALTLRVPPQELPGIGESLPLAVQ 346
Query: 356 MKKAHVFN 363
+ HVF+
Sbjct: 347 PDRLHVFD 354
>pir||S05329 inner membrane protein malK - Salmonella typhimurium
Length = 369
Score = 302 bits (764), Expect = 6e-81
Identities = 165/367 (44%), Positives = 237/367 (63%), Gaps = 15/367 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L NV K +GD K+++L+I DGEF+V +GPSGCGK+T LRMIAGLE T G +
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I + + D +PP ER V MVFQSYALYPH++V +N++F + K+ +++RV
Sbjct: 61 FIGETRMND------IPPAERGVGMVFQSYALYPHLSVAENMSFRPQAAGAKKEVMNQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+VAE+L L LL+RKP+ LSGGQRQ VA+GR ++ P+VFL+DEPLSNLDA LRV+MR
Sbjct: 115 NQVAEVLQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRI 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L ++LG T IYVTHDQVEAMT+ D+I V++ G + QVG P E+Y+ P + FVAGFI
Sbjct: 175 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-IGKEVIFGIRPEDIYDASF 299
GSP MNFL V++ ++ + L + + +E + +G + GIRPE + +
Sbjct: 235 GSPKMNFLPVKVTATA-IEQVQVELPNRQQIWLPVESRGVQVGANMSLGIRPEHLLPSDI 293
Query: 300 IRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESV--VEEGQEAEVFFDMK 357
V + +V +VE LG E +H+++ I + Q V VEEG + +
Sbjct: 294 ADV-----TLEGEVQVVEQLGHETQIHIQIPAIRQNLVYRQNDVVLVEEGATFAIGLPPE 348
Query: 358 KAHVFNK 364
+ H+F +
Sbjct: 349 RCHLFRE 355
>sp|Q9Z3R9|AGLK_RHIME ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROTEIN AGLK
>gi|4210903|gb|AAD12046.1| (AF045609) AglK
[Sinorhizobium meliloti]
Length = 363
Score = 302 bits (764), Expect = 6e-81
Identities = 179/378 (47%), Positives = 236/378 (62%), Gaps = 30/378 (7%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M + L ++ K +G + + L+IK+GEF+V +GPSGCGK+T LRMIAGLEE T G +
Sbjct: 1 MTGLLLKDIRKSYGAVDVIHGIDLDIKEGEFVVFVGPSGCGKSTLLRMIAGLEEITGGDM 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ID + V D VPP +R +AMVFQSYALYPHMTVYDN+AF +++ + K+EIDRRV
Sbjct: 61 FIDGERVND------VPPSKRGIAMVFQSYALYPHMTVYDNMAFGMRIARESKEEIDRRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
R A+ML LT L R P+ LSGGQRQRVA+GRAI R PKVFL DEPLSNLDA LRV
Sbjct: 115 RGAADMLQLTPYLDRLPKALSGGQRQRVAIGRAICRNPKVFLFDEPLSNLDAALRVATAI 174
Query: 181 ELKKLQRQLGVTT-IYVTHDQVEAMTMGDRIAVMN-RGELQQVGTPDEVYNKPLNTFVAG 238
E ++ QR + TT IYVTHDQVEAMT+ DRI V + R +Q G P E+Y +P N FVA
Sbjct: 175 ENRQAQRAMSNTTMIYVTHDQVEAMTLADRIVVFSRRSTFEQFGAPFELYERPANFFVAR 234
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLE------ENNLIGKEVIFGIRPE 292
FIGSPPMN + AT+++ G + + L + L+ EN GK FG+RPE
Sbjct: 235 FIGSPPMNVIPATITATG----QQTAVSLAGGKSVTLDVPTNASEN---GKTASFGVRPE 287
Query: 293 DIYDASFIRVEEPEN-IVRAKVDIVENLGGEKIVHLR--LGDIIFTAKFPQESVVEEGQE 349
D +RV E ++ + V IVE LG ++++ + + AK P + V G +
Sbjct: 288 D------LRVTEADDFLFEGTVSIVEALGEVTLLYIEGLVENEPIIAKMPGIARVGRGDK 341
Query: 350 AEVFFDMKKAHVFNKTNE 367
D K H+F+ +
Sbjct: 342 VRFTADKAKLHLFDTNGQ 359
>pir||E70943 probable ABC-type sugar transport protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2896775|emb|CAA17252.1|
(AL021899) hypothetical protein Rv2038c [Mycobacterium
tuberculosis]
Length = 357
Score = 299 bits (757), Expect = 4e-80
Identities = 165/317 (52%), Positives = 214/317 (67%), Gaps = 26/317 (8%)
Query: 15 DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGI 74
D A+ L L + DGEF+VL+GPSGCGKTT+LRM+AGLE G+I I ++ V +
Sbjct: 17 DRPALDRLDLIVGDGEFVVLVGPSGCGKTTSLRMVAGLETLDCGRIRIGERDVTE----- 71
Query: 75 FVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLK 134
V PK+RDVAMVFQ+YALYPHMTV N+ F LK+ K+ K EI RV A++L L L
Sbjct: 72 -VDPKDRDVAMVFQNYALYPHMTVAQNMGFALKVAKIGKAEIRERVLAAAKLLDLQSYLD 130
Query: 135 RKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTI 194
RKP++LSGGQRQRVA+GRAI+RRP+VFLMDEPLSNLDAKLR + R ++ LQRQLG TT+
Sbjct: 131 RKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRGQTRNQIAALQRQLGTTTV 190
Query: 195 YVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSS 254
YVTHDQVEAMTMGDR+AV++ G LQQ +P E+Y P N FVAGFIGSP MN ++ +
Sbjct: 191 YVTHDQVEAMTMGDRVAVLSDGVLQQCASPRELYRNPGNVFVAGFIGSPAMNLFRLSI-A 249
Query: 255 DGFLDFGEFRLKLLKDQFEVLEENNLIG--KEVIFGIRPEDIYDASFIRVEEPENIVRAK 312
D + G+ +++L ++G EVI G+RPE +E +
Sbjct: 250 DSTVSLGD---------WQILLPRAVVGTAAEVIIGVRPE--------HLELGGAGIEMD 292
Query: 313 VDIVENLGGEKIVHLRL 329
VD+VE LG + ++ R+
Sbjct: 293 VDMVEELGADAYLYGRI 309
>pir||C83353 probable ATP-binding component of ABC maltose/mannitol transporter
PA2341 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9948377|gb|AAG05729.1|AE004660_5 (AE004660)
probable ATP-binding component of ABC maltose/mannitol
transporter [Pseudomonas aeruginosa]
Length = 370
Score = 297 bits (752), Expect = 2e-79
Identities = 165/374 (44%), Positives = 235/374 (62%), Gaps = 21/374 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA++K+ N+ K F +K + L+++D EF+V +GPSGCGK+T LR+IAGLEE + G I
Sbjct: 1 MADLKIRNLQKGFDGQAIIKGIDLDVRDREFVVFVGPSGCGKSTLLRLIAGLEEASGGSI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+D + D PP +RD+AMVFQ+YALYPHMTV N++F L L V K+E+ +V
Sbjct: 61 ALDGTDITD------TPPAKRDLAMVFQTYALYPHMTVRRNLSFALDLAGVDKREVAAKV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
A +L L LL+RKPR+LSGGQRQRVA+GRAI+R PK+FL DEPLSNLDA LRV+MR
Sbjct: 115 DAAARILELQALLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRL 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
EL +L ++L T IYVTHDQVEAMT+ D++ V+N G ++QVG+P E+Y+ P N FVAGF+
Sbjct: 175 ELARLHQELAATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSPLELYHHPANLFVAGFL 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKL-LKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
G+P M FL +S + + E L+ + + G V GIRPE
Sbjct: 235 GTPKMGFLRGHLSRNQG-ERCEVALECGARVGLPLCAGELATGSPVTLGIRPE------H 287
Query: 300 IRVEEP----ENIVRAKVDIVENLGGEKIVHLRL--GDIIFTAKFPQESVVEEGQEAEVF 353
+ + P + ++R D+ E LG + H+R G+++ T + + + G E+
Sbjct: 288 LNIARPGHAFQGLLRVAADVSERLGSDSFCHVRADSGEML-TLRVRGDFAPDYGAPLELG 346
Query: 354 FDMKKAHVFNKTNE 367
FD + H+F+ +
Sbjct: 347 FDPEHCHLFDSNGQ 360
>gb|AAA93151.1| (U12007) MsiK [Streptomyces lividans]
Length = 314
Score = 294 bits (746), Expect = 8e-79
Identities = 153/275 (55%), Positives = 198/275 (71%), Gaps = 9/275 (3%)
Query: 18 AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVP 77
AV L ++I DGEFLVL+GPSGCGK+T+LRM+AGLE+ G I I D+ V +P
Sbjct: 20 AVDGLDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTH------LP 73
Query: 78 PKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKP 137
PK+RD+AMVFQ+YALYPHM+V DN+ F LK+ V K EI ++V E A++L LTE L RKP
Sbjct: 74 PKDRDIAMVFQNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKP 133
Query: 138 RELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVT 197
+ LSGGQRQRVA+GRAI+R P+VFLMDEPLSNLDAKLR+ R ++ LQR+LG+TT+YVT
Sbjct: 134 KALSGGQRQRVAMGRAIVREPQVFLMDEPLSNLDAKLRLSTRTQIASLQRRLGITTVYVT 193
Query: 198 HDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDGF 257
HDQVEAMTMGDR+A +QV +P +Y+KP N FVAGFIGSP MN + + +DG
Sbjct: 194 HDQVEAMTMGDRVASSRTVCSRQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPI-TDGG 252
Query: 258 LDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
+ FG + + +D + + + V G+RPE
Sbjct: 253 VKFGNSVVPVNRDALKAASDKG--DRTVTVGVRPE 285
>sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK >gi|420867|pir||S34734
ATP-binding protein lacK - Agrobacterium radiobacter
Length = 363
Score = 294 bits (745), Expect = 1e-78
Identities = 170/372 (45%), Positives = 228/372 (60%), Gaps = 15/372 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MAEV+L ++ K +G +K ++LE+ GEF+V +GPSGCGK+T LRMIAGLE+ + G++
Sbjct: 1 MAEVRLTDIRKSYGSLEVIKGVNLEVSSGEFVVFVGPSGCGKSTLLRMIAGLEDISSGEL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
I ++ D V P +R +AMVFQ+YALYPHMTV +N+ F L+ + K EI+RRV
Sbjct: 61 TIGGTVMND------VDPSKRGIAMVFQTYALYPHMTVRENMGFALRFAGMAKDEIERRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
A++L L L+ RKP+ LSGGQRQRVA+GRAI+R+P VFL DEPLSNLDA+LRV MR
Sbjct: 115 NAAAKILELDALMDRKPKALSGGQRQRVAIGRAIVRQPDVFLFDEPLSNLDAELRVHMRV 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L ++L T +YVTHDQVEAMT+ D+I VM G ++QVG P +Y+ P N FVAGFI
Sbjct: 175 EIARLHKELNATIVYVTHDQVEAMTLADKIVVMRGGIVEQVGAPLALYDDPDNMFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKD-QFEVLEENNLIGKE-VIFGIRPEDIYDAS 298
GSP MNFL A V LK D Q V G + V G+RPE
Sbjct: 235 GSPRMNFLPAVVIGQAEGGQVTVALKARPDTQLTVACATPPQGGDAVTVGVRPE-----H 289
Query: 299 FIRVEEPENIVRAKVDIVENLGGEKIV--HLRLGDIIFTAKFPQESVVEEGQEAEVFFDM 356
F+ + + A VD+VE+LG V H G+ I + + G E V
Sbjct: 290 FLPAGSGDTQLTAHVDVVEHLGNTSYVYAHTVPGEQIIIEQEERRHGGRYGDEIAVGISA 349
Query: 357 KKAHVFNKTNER 368
K + +F+ + R
Sbjct: 350 KTSFLFDASGRR 361
>pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648888|emb|CAB03654.1| (Z81331) ugpC [Mycobacterium
tuberculosis]
Length = 360
Score = 294 bits (745), Expect = 1e-78
Identities = 178/379 (46%), Positives = 236/379 (61%), Gaps = 35/379 (9%)
Query: 1 MAEVKLINVWKKF--GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
MA V+ V +++ D V L L+I DGEFLVL+GPSGCGK+TTLR++AGLE G
Sbjct: 1 MANVQYSAVTQRYPGADAPTVDNLDLDIADGEFLVLVGPSGCGKSTTLRVLAGLEPIESG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
+I I D V +PP+ RDVAMVFQ+YALYP+MTV N+ F L+ + + + R
Sbjct: 61 RISIGDVDVTH------LPPRARDVAMVFQNYALYPNMTVAANMGFALRNAGMSRADTRR 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
RV EVA+ML LT+LL RKP +LSGGQRQRVA+GRAI+RRP+VF MDEPLSNLDAKLRV
Sbjct: 115 RVLEVADMLELTDLLDRKPAKLSGGQRQRVAMGRAIVRRPRVFCMDEPLSNLDAKLRVST 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R+++ LQR+LG TT+YVTHDQVEAMTMGDR+AV+ G LQQV TP +Y+ P+NTFVA
Sbjct: 175 RSQISGLQRRLGTTTVYVTHDQVEAMTMGDRVAVLKDGVLQQVDTPRALYDDPVNTFVAT 234
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
FIG+P MN + A V+ G R L + + + V+ G+RPE AS
Sbjct: 235 FIGAPAMNLIDAAVA------HGVVRAPDL-----AIPVPDPAAERVLVGVRPESWDVAS 283
Query: 299 FIRVEEPENIVRAKVDIVENLGGEKIVHL----------RLGDIIFTAKFPQESVVEEGQ 348
+ P ++ V++VE LG E V+ R I+F + + + V G+
Sbjct: 284 ---IGTPGSLT-VHVELVEELGFESFVYATPVDQRGWSSRAPRIVF--RTDRRTAVRVGE 337
Query: 349 EAEVFFDMKKAHVFNKTNE 367
+ ++ +FN E
Sbjct: 338 SLAIVPHSQEVRLFNSRTE 356
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 293 bits (742), Expect = 2e-78
Identities = 161/374 (43%), Positives = 247/374 (65%), Gaps = 25/374 (6%)
Query: 1 MAEVKLINVWKKFGD----FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
M+ VKL N+WK++ + ++ L+LEI+ GEF+V+LGPSG GKTT L++IAGL
Sbjct: 2 MSYVKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQD 61
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G +Y+ ++V D +PPK+R VAMV Q+YA+YP M+VYDNIAFPLK+ + K EI
Sbjct: 62 KGHVYLRGEVVDD------LPPKDRRVAMVPQNYAIYPFMSVYDNIAFPLKVMHLSKDEI 115
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
+RV EVA ML + LL+RKP +LSGGQ QRVA+ RA+++ + LMDEPLSNLDA++RV
Sbjct: 116 KKRVLEVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRV 175
Query: 177 KMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFV 236
R ELK+LQR L T IYVTHDQVEA+++ ++A+++ G +Q G P E+Y +P + +V
Sbjct: 176 VAREELKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKRPNSAWV 235
Query: 237 AGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYD 296
F+G+PPMN + + D + +R+ L ++++ L +N G++V+ G+RPED+
Sbjct: 236 GSFLGNPPMNIIRGEIEGDSII-IDSYRIG-LPEEYKNLVKN---GQKVLVGVRPEDMEI 290
Query: 297 ASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVV--EEGQEAEVFF 354
+ +E KV++VE+LG I+HL++ + T + ++S+ E G++ +
Sbjct: 291 RNSGEIE-------GKVEMVEDLGPYSIIHLKINEET-TIRVIEKSLSRRERGEKVRISI 342
Query: 355 DMKKAHVFNKTNER 368
D K +F+ ++ER
Sbjct: 343 DTSKVVLFDASSER 356
>gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens]
Length = 367
Score = 293 bits (741), Expect = 3e-78
Identities = 164/370 (44%), Positives = 229/370 (61%), Gaps = 24/370 (6%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA +K+ N+ K F F+ +K + LE+ D EF+V +GPSGCGK+T LR+IAGLEE + G I
Sbjct: 1 MANLKIKNLQKGFEGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSEGTI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+D + + + V P +RD+AMVFQ+YALYPHM+V N++F L L V KQ ++ +V
Sbjct: 61 ELDGRDITE------VTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAGVDKQLVESKV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
E A +L L LL+RKP++LSGGQRQRVA+GRAI+R PK+FL DEPLSNLDA LRV+MR
Sbjct: 115 NEAARILELGPLLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRL 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
EL +L ++L T IYVTHDQVEAMT+ D++ V+N G ++QVG+P E+Y++P N FVAGF+
Sbjct: 175 ELARLHKELQATMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPLELYHQPANLFVAGFL 234
Query: 241 GSPPMNFLTATVSS-DG-----FLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDI 294
G+P M FL V+ DG LD G + + +G V GIRPE +
Sbjct: 235 GTPKMGFLKGKVTRVDGQGCEVQLDAGTL------ISLPLSGASLSVGSAVTLGIRPEHL 288
Query: 295 YDASFIRVEEPENIVRAKVDIVENLGGEKIVH-LRLGDIIFTAKFPQESVVEEGQEAEVF 353
AS + + D+ E LG + H + T + + + G+ +
Sbjct: 289 EIAS-----PGQTTLTVTADVGERLGSDTFCHVITSNGEPLTMRIRGDMASQYGETLHLH 343
Query: 354 FDMKKAHVFN 363
D H+F+
Sbjct: 344 LDPAHCHLFD 353
>sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK)
>gi|2338762|gb|AAC45769.1| (AF018073) sorbitol/mannitol
transport ATP-binding transport protein; SmoK
[Rhodobacter sphaeroides]
Length = 332
Score = 292 bits (740), Expect = 4e-78
Identities = 145/248 (58%), Positives = 183/248 (73%), Gaps = 6/248 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++ L NV K+FG+ + L L+I+DGEF+V +GPSGCGK+T LR+IAGLE+ + GQI
Sbjct: 1 MGKITLRNVQKRFGEAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLEDVSDGQI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
ID + + +PP +R +AMVFQSYALYPHMTV NIAFPL++ K+ QEI+RRV
Sbjct: 61 MIDGRDATE------MPPAKRGLAMVFQSYALYPHMTVKKNIAFPLRMAKMEPQEIERRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
A++L LT L R+P +LSGGQRQRVA+GRAI+R P FL DEPLSNLDA LRV MR
Sbjct: 115 SNAAKILNLTNYLDRRPGQLSGGQRQRVAIGRAIVREPAAFLFDEPLSNLDAALRVNMRL 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L + L T IYVTHDQVEAMTM D+I V+N G ++QVG+P +Y P N FVAGFI
Sbjct: 175 EITELHQSLETTMIYVTHDQVEAMTMADKIVVLNAGRIEQVGSPLTLYRNPANLFVAGFI 234
Query: 241 GSPPMNFL 248
GSP MN +
Sbjct: 235 GSPKMNLI 242
>pir||F72510 probable multiple sugar-binding transport ATP-binding protein
APE2060 - Aeropyrum pernix (strain K1)
>gi|5105758|dbj|BAA81070.1| (AP000063) 388aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 388
Score = 291 bits (736), Expect = 1e-77
Identities = 168/366 (45%), Positives = 235/366 (63%), Gaps = 26/366 (7%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+KL VWK FG+ AV++++L I+D EF+ +LGPSG GKTT L +IAG+ +P+ G+IY +
Sbjct: 1 MKLEGVWKVFGNVVAVRDVNLYIEDKEFVSILGPSGSGKTTLLYLIAGIYKPSRGRIYFN 60
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
D V D +PP +R++ +VFQ+YALYPHMTVY+NIAFPL+LR + I +V V
Sbjct: 61 DVDVTD------LPPNKRNIGLVFQNYALYPHMTVYENIAFPLRLRNFGEPAIKEKVLSV 114
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
A++LG+ LL R P +LSGGQ+QRVAL RA+++ P+V L+DEPLSNLDA LR+K+R+ELK
Sbjct: 115 AKLLGIEGLLDRYPAQLSGGQQQRVALARALVKEPEVLLLDEPLSNLDALLRIKIRSELK 174
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
KLQ++LG+T IYVTHDQ EA+ M DRIA++ G +QQVG P +VY KP N FVA FIG+P
Sbjct: 175 KLQKELGITAIYVTHDQSEALAMADRIAIIASGVIQQVGKPWDVYYKPRNVFVASFIGTP 234
Query: 244 PMNFLTATVSSDG--FLDFGEFRL---KLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
P N ++ + S L G R + + ++ ++ N+ VI G RPE
Sbjct: 235 PANLVSVPLDSSRRCLLLPGGGRYCPPRRIAEKLAAVKTNS-----VILGFRPE-----V 284
Query: 299 FIRVEEPEN---IVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
+ E P + A+V VE LG E IV L + P VVE + +F +
Sbjct: 285 AVLSESPLGDYVSMEAEVYTVETLGRENIVTLLVNGSQVKVIVP--PVVEPRPGSRIFIN 342
Query: 356 MKKAHV 361
+++ V
Sbjct: 343 IEEDKV 348
>pir||T03550 ATP-binding transport protein polk - Rhodobacter capsulatus
>gi|3128351|gb|AAC16203.1| (AF010496) ATP-binding
transport protein polk [Rhodobacter capsulatus]
Length = 332
Score = 290 bits (734), Expect = 2e-77
Identities = 164/363 (45%), Positives = 213/363 (58%), Gaps = 38/363 (10%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M E+ L V K+FGD + + L I DGEF+V +GPSGCGK+T LR+IAGLE+ + G +
Sbjct: 1 MGEILLKGVTKRFGDVEVIPPIDLAINDGEFVVFVGPSGCGKSTLLRLIAGLEDVSGGVV 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
ID K P +R +AMVFQSYALYPHM+V NIAFPLK+ K+P EI+ +V
Sbjct: 61 EIDGK------DATATAPADRGLAMVFQSYALYPHMSVKKNIAFPLKMAKLPAAEIEAKV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ A++L LT L RKP +LSGGQRQRVA+GRAI+R P+ FL DEPLSNLDA LRV MR
Sbjct: 115 QAAAKVLNLTAYLDRKPGQLSGGQRQRVAIGRAIVRNPQAFLFDEPLSNLDAALRVNMRL 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L L T IYVTHDQVEAMTM D+I V+ G ++QVG+P E+Y P N FVAGFI
Sbjct: 175 EISELHHSLKTTMIYVTHDQVEAMTMADKIVVLQAGRIEQVGSPLELYRTPRNRFVAGFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
GSP MNFL ++ G I GIRPE +
Sbjct: 235 GSPKMNFLEGPEAAKQ-------------------------GAHAI-GIRPE------HL 262
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH 360
R+ E + V + E+LG + +H+ + + E + G + DM + H
Sbjct: 263 RISTTEGMWPGTVGVSEHLGSDTFLHVTTDHGLINVRAGGEVGLHHGDRVFLSPDMGQLH 322
Query: 361 VFN 363
F+
Sbjct: 323 RFD 325
>pir||T47062 hypothetical protein [imported] - Yersinia pestis
>gi|4106650|emb|CAA21405.1| (AL031866) ORF80, len=296
aa, 59.6% identity in 265 aa overlap with MalK E. coli
(371 aa), Fasta scores: opt: 1024, E(): 0 [Yersinia
pestis]
Length = 296
Score = 289 bits (732), Expect = 3e-77
Identities = 150/256 (58%), Positives = 186/256 (72%), Gaps = 13/256 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ ++L NV+K+F D + ++ LEIK+GEF V +GPSGCGK+T LRMIAGLE + G+I
Sbjct: 1 MSGIRLSNVFKRFHDTQVINQVDLEIKNGEFCVFIGPSGCGKSTLLRMIAGLETISSGEI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
I DK+V + P +R VAMVFQSYALYPHMT+YDN+AF LKL K EI+RRV
Sbjct: 61 SIGDKVVNK------LAPADRGVAMVFQSYALYPHMTIYDNMAFNLKLAKTEPAEIERRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
A++L L LL+R P+ LSGGQRQRVA+GRAI+R P VFL DEPLSNLDA LRV R
Sbjct: 115 LNAAKILQLELLLQRLPKALSGGQRQRVAIGRAIVRNPDVFLFDEPLSNLDASLRVATRV 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRI-------AVMNRGELQQVGTPDEVYNKPLN 233
E+ KL QLG T +YVTHDQVEAMT+ D+I A++N G + Q G P E+Y+ P+N
Sbjct: 175 EIAKLHHQLGNTMVYVTHDQVEAMTLADKIVLLNSGAAMLNEGSIAQTGHPLELYHHPVN 234
Query: 234 TFVAGFIGSPPMNFLT 249
FVAGFIGSP MNFL+
Sbjct: 235 EFVAGFIGSPKMNFLS 250
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 288 bits (730), Expect = 6e-77
Identities = 171/367 (46%), Positives = 224/367 (60%), Gaps = 16/367 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA ++L +V K+FG+ A+ +SL I DGE LLGPSGCGKTTTLR+IAG E P G++
Sbjct: 1 MAGIRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRV 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
YI + V + P ER+ AMVFQ+YAL+PHM V+DNIA+ LKLRK+P+ EI RRV
Sbjct: 61 YIGSRDVT------MLKPYERNTAMVFQNYALWPHMRVFDNIAYGLKLRKLPRSEIVRRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
R AE+L + LL R P +LSGGQ+QRVA+ RAI+ P+V LMDEPLSNLDA LR+KMR
Sbjct: 115 RWAAELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMRE 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +LQ++LGVT +YVTHDQ EA+++ R+AVMNRG ++QVGTP EVY KP FVA FI
Sbjct: 175 EIVRLQKRLGVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEVYEKPATYFVATFI 234
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKL---LKDQFEVLEENNLIGKEVIFGIRPEDIYDA 297
G + L VS L G R+ L L +E G+ V IRPE +
Sbjct: 235 GRSTV--LDGRVSE--VLGSGMVRVALEGGLSIVGTDMEGGLRQGERVKVVIRPERV--- 287
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMK 357
EN+ KV + LG + + +G T GQ + D +
Sbjct: 288 KVGHEYNGENVFEGKVSLAMFLGWRTQLKVEVGGQEITIYSDPRRAPLPGQPVRFYIDPE 347
Query: 358 KAHVFNK 364
+A V+ +
Sbjct: 348 EAKVYRQ 354
>gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]
Length = 342
Score = 287 bits (728), Expect = 1e-76
Identities = 149/250 (59%), Positives = 185/250 (73%), Gaps = 7/250 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MAE++L ++ K FG F +K +S+EIK GEF+V +GPSGCGK+T LR+IAGLEE T G +
Sbjct: 1 MAELQLRDIRKSFGAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLEEITSGTL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
D ++V + P R +AMVFQSYALYPHMTVY+N+AF ++L KQ+ +RV
Sbjct: 61 AFDGQIVNQ------LTPSRRGIAMVFQSYALYPHMTVYENMAFGMQLAGKDKQQCRKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
AEML LT L+R PR+LSGGQRQRVA+GRAI+R PKVFL DEPLSNLDA LRV R
Sbjct: 115 EAAAEMLQLTPYLERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRL 174
Query: 181 ELKKLQRQLGVTT-IYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
E+ KL R + TT IYVTHDQVEAMT+ DRI V+ G ++Q+GTP E+Y P + FVAGF
Sbjct: 175 EIAKLHRSMHKTTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPLELYETPNSVFVAGF 234
Query: 240 IGSPPMNFLT 249
IGSP MNFL+
Sbjct: 235 IGSPKMNFLS 244
>gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPase [Pseudomonas aeruginosa]
Length = 269
Score = 287 bits (726), Expect = 2e-76
Identities = 143/250 (57%), Positives = 189/250 (75%), Gaps = 8/250 (3%)
Query: 1 MAEVKLINVWKKFGDFTA--VKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
MA ++L N+ K +G A ++++ L+I GEFL+L+GPSGCGK+T + IAGLE T G
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
I +D + ++ + PK+RD+AMVFQSYALYP M+V +NIAF LK+RK+P+ ID
Sbjct: 61 AILVDGQDISG------MSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDE 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
V VA +L + LL+RKP +LSGGQ+QRVA+GRA+ RRPKV+L DE LSNLDAKLRV+M
Sbjct: 115 EVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEQLSNLDAKLRVEM 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R ELK + ++L TT+YVTHDQ+EAMT+GD++AVM G +QQ GTP ++YN P N FVA
Sbjct: 175 RTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPDNLFVAS 234
Query: 239 FIGSPPMNFL 248
FIGSPPMNF+
Sbjct: 235 FIGSPPMNFI 244
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 283 bits (716), Expect = 3e-75
Identities = 153/303 (50%), Positives = 207/303 (67%), Gaps = 23/303 (7%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++L ++ K+FG+F ++SL +KDGE L LLGPSGCGKTTTLR+IAGLE+P G++
Sbjct: 1 MVSIELRDIIKRFGEFEL--KVSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRV 58
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Y D + + D +PP ER++ +VFQ YAL+PHMTV+ N+AF L++R+VP+ EI++RV
Sbjct: 59 YFDGRDITD------LPPYERNIGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRV 112
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REV +++GL R P ELSGGQ+QRVAL RA++ P V L+DEPLSNLDAK+R K+R
Sbjct: 113 REVLDLVGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRG 172
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+K++ ++LG+TTIYVTHDQ EAM + DRIAVMN G ++QVG P ++Y P N FVA F+
Sbjct: 173 EIKRIVKELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDLYYNPKNEFVANFL 232
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
G +S+ L+ E R L FEV E GK IF RPE++ I
Sbjct: 233 G----------ISNIVELEAKEGRACLGDLCFEVGRE----GKGKIF-FRPENVAVGEGI 277
Query: 301 RVE 303
E
Sbjct: 278 EAE 280
>emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-binding protein
[Thermoplasma acidophilum]
Length = 372
Score = 282 bits (714), Expect = 4e-75
Identities = 154/336 (45%), Positives = 215/336 (63%), Gaps = 18/336 (5%)
Query: 8 NVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLV 67
N+ ++GD +K +L ++DGEF V+LG SG GKTT LR IAGL G+I ID V
Sbjct: 7 NLTARYGDKYILKNFNLRVEDGEFFVILGSSGSGKTTLLRSIAGLIPIDDGRILIDGNDV 66
Query: 68 ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEML 127
D + P +R++AMVFQ++ALYPHMTVYDNI+ LK++ VPK EI ++V +VAEML
Sbjct: 67 TD------LYPSDRNIAMVFQNFALYPHMTVYDNISLNLKIKHVPKDEIKKKVSDVAEML 120
Query: 128 GLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQR 187
+++ L++ PR+LSGG++QRV + RA++R P VFLMDEPLSNLDAKLR +M EL+
Sbjct: 121 HISQHLQKYPRQLSGGEQQRVGIARAMVRDPSVFLMDEPLSNLDAKLRREMLGELRSFHE 180
Query: 188 QLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNF 247
++ T IYV HDQ EAM + DRI V+N+G++ Q+GTPDE+Y+ P N FVAGFIG+PPMN
Sbjct: 181 KVKKTIIYVCHDQDEAMALADRILVLNQGQIMQLGTPDELYDHPANVFVAGFIGNPPMNI 240
Query: 248 LTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPEN 307
L G R+ ++ + +++ GK + GIRPE I + + +
Sbjct: 241 LECDAEEKS----GGTRIDVMNSGYLEVDDEIPEGK-MFIGIRPE------LIGLSDHDG 289
Query: 308 IVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESV 343
I A D N G VH+++GD A P+E +
Sbjct: 290 I-SASFDYFINSGLNAEVHVKIGDTPIRAVIPKEEI 324
>sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|78246|pir||S05328 inner membrane protein malK -
Enterobacter aerogenes (fragment)
Length = 294
Score = 279 bits (706), Expect = 4e-74
Identities = 151/297 (50%), Positives = 204/297 (67%), Gaps = 13/297 (4%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L NV K +GD K+++LEI+DGEF+V +GPSGCGK+T LRMIAGLE T G +
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLEIQDGEFVVFVGPSGCGKSTLLRMIAGLETVTSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I D + D VPP ER + MVFQSYALYPH++V +N++F LKL K+ I++RV
Sbjct: 61 FIGDTRMND------VPPAERGIGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+VAE+L L LL+R + LSGGQR VA+ R ++ P+VFL+DEPLSNLDA LRV+MR
Sbjct: 115 TQVAEVLQLAHLLERNRKALSGGQRPGVAI-RTLVAEPRVFLLDEPLSNLDAALRVQMRI 173
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+ +L ++LG T IYVTHDQVEAMT+ D+I V++ G + QVG P E+Y+ P + FVAGFI
Sbjct: 174 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFI 233
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQ---FEVLEENNLIGKEVIFGIRPEDI 294
GSP MNFL V++ + +++L Q V + +G + GIRPE +
Sbjct: 234 GSPKMNFLPVKVTATA---IEQVQVELPNRQQVWLPVDSAHVQVGANMSLGIRPEHL 287
>pir||T36808 probable sugar transport system ATP-binding chain - Streptomyces
coelicolor >gi|5441781|emb|CAB46805.1| (AL096811)
putative ABC sugar transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 445
Score = 274 bits (693), Expect = 1e-72
Identities = 163/320 (50%), Positives = 203/320 (62%), Gaps = 18/320 (5%)
Query: 19 VKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVPP 78
V LSL+I GEFLVLLGPSGCGK+T LRMIAGLEE T G++ +D D + P
Sbjct: 21 VDRLSLDIAPGEFLVLLGPSGCGKSTVLRMIAGLEEITEGELTLDGAYAND------LLP 74
Query: 79 KERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKPR 138
ER +AMVFQ++ALYP+MT NI FPL++ P+ + RV A MLG+ +LL R P
Sbjct: 75 AERRMAMVFQNFALYPNMTTRGNIGFPLRVED-PQTDHTPRVDATARMLGIEDLLDRLPA 133
Query: 139 ELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTH 198
+LSGG+RQRVA+GRAI R P FLMDEPLSNLDAKLR +RAE+ +L R+LGVTTIYVTH
Sbjct: 134 QLSGGERQRVAMGRAISRHPTAFLMDEPLSNLDAKLRNHLRAEITRLTRELGVTTIYVTH 193
Query: 199 DQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDGFL 258
DQ EAM++GDR+AV+ G LQQV TP VY P N FVA FIG+P +N L V + L
Sbjct: 194 DQSEAMSLGDRVAVLRGGVLQQVDTPRAVYALPRNVFVAAFIGTPRINLLRGLVRAP--L 251
Query: 259 DFGEFRLKLLKDQFEVLEENNL--------IGKEVIFGIRPEDIYDASFIRVEEPENIVR 310
D G + L K + E +L G+EVI G+R E + A E ++
Sbjct: 252 D-GAMTISLGKQFLRLPEPLSLDHQLLRVQQGREVIVGLRSEAVRIAKPSSARPGEVLLT 310
Query: 311 AKVDIVENLGGEKIVHLRLG 330
V+ VE G E +VH G
Sbjct: 311 GLVEHVEFQGHEVLVHFNTG 330
>gb|AAB59057.1| (J01648) malK [Escherichia coli]
Length = 370
Score = 270 bits (684), Expect = 1e-71
Identities = 160/372 (43%), Positives = 225/372 (60%), Gaps = 24/372 (6%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA V+L NV K +G+ K+++L+I +GEF+V +GPSGCGK+T LRMIAGLE T G +
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+I +K + D PP ER V MVFQSYALYPH++V +N++F LK K+ I++RV
Sbjct: 61 FIGEKRMND------TPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+VAE+L L LL RKP+ LSGGQRQRVA+GR ++ P VFL+DEPLSNLDA LRV+MR
Sbjct: 115 NQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRI 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEV--YNKPLNTFVAG 238
E+ +L ++LG T IYVTHDQVEAMT+ D+I V++ G + QVG P V +P +
Sbjct: 175 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLAVPLSGRPFCRRIYR 234
Query: 239 FIGSPPMNF-LTATVSSDGFLDFGEFRLKLLKDQ---FEVLEENNLIGKEVIFGIRPEDI 294
F + +TAT +D + L + Q V + +G + GIRPE +
Sbjct: 235 FAKDELLPVKVTATA-----IDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHL 289
Query: 295 YDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESV--VEEGQEAEV 352
+ V I+ +V +VE LG E +H+++ I + Q V VEEG +
Sbjct: 290 LPSDIADV-----ILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAI 344
Query: 353 FFDMKKAHVFNK 364
++ H+F +
Sbjct: 345 GLPPERCHLFRE 356
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 268 bits (679), Expect = 5e-71
Identities = 147/312 (47%), Positives = 203/312 (64%), Gaps = 19/312 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+ + NV K++ T + +LSLEIK+GEF LLGPSGCGKTT LRMIAG G+I D
Sbjct: 5 ISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGEIKFD 64
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
++ + +P +R++ MVFQ+YA++PHMTV +N+ + LKLRK K+ + ++V E+
Sbjct: 65 KDVINN------IPAHKRNIGMVFQNYAIFPHMTVRENVEYGLKLRKENKESMKKKVDEM 118
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ + E R P LSGGQ+QRVAL RAI+ P V LMDEPLSNLDAKLR++MR+ +K
Sbjct: 119 LHVVKIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAIK 178
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+QR +G+TT+YVTHDQ EA+ + DRIAVM G +QQVG+P +Y +P N FVA FIG
Sbjct: 179 DIQRHVGITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPYNVFVATFIGH- 237
Query: 244 PMNFLTATVSSDGFLDFGEFR--LKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIR 301
N AT+ +G + FR KL D +++ G EV+ GIRPE+ F+
Sbjct: 238 -SNLFYATIKIEGNDTYLLFRCGYKLKMDNLLDVKD----GDEVVVGIRPEEF----FVN 288
Query: 302 VEEPENIVRAKV 313
E E I +AK+
Sbjct: 289 SENDEGI-KAKI 299
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 267 bits (676), Expect = 1e-70
Identities = 134/251 (53%), Positives = 180/251 (71%), Gaps = 8/251 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M V+L V KKF F + LE+KDGE + +LGPSGCGKTTTLR+IAGLE P G +
Sbjct: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
D + V F+PP R++ VFQ YAL+PHM V+ N+AF L++RK+P++EI+R+V
Sbjct: 59 LFDGRDVT------FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
REV E++GL R P +LSGGQ+QRVAL RA++ P+V L+DEPLSNLDAK+R +R
Sbjct: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
E+K++Q++LG+TT+YVTHDQ EAM + DRIAVMN G ++QVG P E+Y P FVA F+
Sbjct: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
Query: 241 GSPPMNFLTAT 251
G+ + L +T
Sbjct: 233 GTGNLLKLRST 243
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 266 bits (672), Expect = 4e-70
Identities = 148/341 (43%), Positives = 211/341 (61%), Gaps = 15/341 (4%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
++L + K F + L+L++ GEFL +LGPSGCGKTT LRMIAG E GQI +D
Sbjct: 18 IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
D+ V VP ++R V VFQSYAL+PHMTV++N+AF L+++KVP+ EI+ RV E
Sbjct: 78 DQDVTQ------VPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEA 131
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L E+ +RKP +LSGGQ+QR+A+ RA++ +PKV L+DE LS LD KLR +M++ELK
Sbjct: 132 LRMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELK 191
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+LQRQLG+T I+VTHDQ EA++M DRI VM G+++Q G+P E+Y P N FVA FIG
Sbjct: 192 QLQRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGE- 250
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVL---EENNLIGKEVIFGIRPEDIYDASFI 300
+N AT E R+++ + E + E+ G ++ +RPED+
Sbjct: 251 -INVFQATTID----RIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIK 305
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQE 341
EE + + + E +V L G + ++F E
Sbjct: 306 ESEEKGIVGHVTDRTYKGMTLESVVELESGMCVMVSEFFNE 346
>pir||T34595 ABC-transporter ATP-binding protein - Streptomyces coelicolor
>gi|2815336|emb|CAA16460.1| (AL021529) SC10A5.28c,
ABC-transporter ATP-binding protein, len : 361 aa;
similar to many eg. Streptomyces reticuli TR:P964 83
(EMBL:Y08921) MSIK PROTEIN involved in in cellobiose and
maltose transport(377 aa), opt: 809 z-score: 1069.1 E():
0 , 40.4% i>
Length = 361
Score = 263 bits (666), Expect = 2e-69
Identities = 151/342 (44%), Positives = 206/342 (60%), Gaps = 8/342 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M E+ + N+ K F +++++ + DGEF LLGPSGCGK+TTL +AGLE P G I
Sbjct: 1 MPELVVENIKKSFHGTAVLEDVNFTVADGEFFTLLGPSGCGKSTTLSCVAGLETPDSGTI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ D++ D + VPP+ R++ +VFQSYAL+PHMTV DN+A PLKLRKV K E R +
Sbjct: 61 RVGDQVFFDGTRRSTVPPEGRNLGLVFQSYALWPHMTVADNLALPLKLRKVTKGEQRRLI 120
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+V + + L R P +LSGGQ+QRVAL R I+ P V L+DEPLSNLDAK+R + R
Sbjct: 121 DDVLTKVDMAHLRDRYPHQLSGGQQQRVALARGIVYSPGVLLLDEPLSNLDAKMRDQARV 180
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
LK LQR++G+TT+YVTHDQVEAM++ DRIAV G LQQVGTP E+Y P VAGFI
Sbjct: 181 WLKDLQREVGITTVYVTHDQVEAMSLSDRIAVFMHGHLQQVGTPTEIYETPATPEVAGFI 240
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-IGKEVIFGIRPEDI--YDA 297
G N L V G + G +++L + + G G+R E I D
Sbjct: 241 GR--CNLLEGRV---GATEGGAVQVELGETGQRLRVAGACSAGSSATVGLRSERITLTDR 295
Query: 298 SFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFP 339
+ + N++RA+++ G L +GD+ A+ P
Sbjct: 296 ADAPHDGAVNVLRARIEQCSYTGARFEYELSIGDVRVHAESP 337
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 262 bits (663), Expect = 4e-69
Identities = 148/340 (43%), Positives = 206/340 (60%), Gaps = 30/340 (8%)
Query: 3 EVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYI 62
EV + NV K F DF +K +SL+IK GEF +LGPSGCGKTT LR+IAG E G + +
Sbjct: 5 EVSIKNVSKFFDDFQVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEGVESGDVLL 64
Query: 63 DDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVRE 122
D K + + +PP +R V ++FQ+YAL+PH+TV++NIAFPLKL+K+ + EI++RV E
Sbjct: 65 DGKSILN------LPPNKRPVNIIFQNYALFPHLTVFENIAFPLKLKKLSENEINQRVNE 118
Query: 123 VAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAEL 182
+ ++ + E ++ P +LSGGQ+QRVA+ RA+ P+V L+DEPLS LDAKLR ++ EL
Sbjct: 119 LLSLIRMEEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVEL 178
Query: 183 KKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS 242
L ++G+T IYVTHDQ EA+++ DR+A+MN GE+ QVGTP EVY P+N F A FIG
Sbjct: 179 DNLHDRVGITFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEVYESPVNVFAATFIGE 238
Query: 243 PPMNFLTA----------TVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
N + A V S G F +R K K G ++ +RPE
Sbjct: 239 --TNLMKAEVVEVEDEYYVVESPGIGQFRCYRDKEAKK-----------GDRLLITLRPE 285
Query: 293 DI-YDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGD 331
I R EE N+ VD +G + +RL +
Sbjct: 286 KIRISRKQFRSEETFNVFHGVVDEEIYMGHQTKYFVRLDE 325
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 259 bits (656), Expect = 3e-68
Identities = 144/315 (45%), Positives = 206/315 (64%), Gaps = 17/315 (5%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
++L ++ K +G T +K+ +L I +GEFL +LGPSGCGKTT LR++AGLEE G I +D
Sbjct: 11 IELRSITKSYGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIILD 70
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ + + VP ++R V VFQSYAL+PHMT+++N+AF L+++KVP+ EI RV E
Sbjct: 71 GEDITN------VPAEKRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPEAEIKPRVLEA 124
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L E+ RKP +LSGGQ+QR+A+ RA++ +PKV L+DE LS LD KLR +M+ ELK
Sbjct: 125 LRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYELK 184
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
LQRQLG+T I+VTHDQ EA+TM DRI ++ +G++ Q G+P E+Y +P N FVA FIG
Sbjct: 185 VLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEEPANLFVARFIGE- 243
Query: 244 PMNFLTATV----SSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
+N ATV S + L E R+ + V ++ L +V+ +RPEDI
Sbjct: 244 -INVFDATVIERKSENVVLANVEGRVCDIYTDIPVKKDQQL---QVL--LRPEDIVIKEL 297
Query: 300 IRVEEPENIVRAKVD 314
E + I+ +D
Sbjct: 298 DEHEHSKAIIGHIID 312
>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
Length = 317
Score = 258 bits (652), Expect = 8e-68
Identities = 127/247 (51%), Positives = 179/247 (72%), Gaps = 8/247 (3%)
Query: 2 AEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIY 61
A+++L N+ K +G F + +LSL I+ GEF V+LGPSG GK+T L++I G+E+P G+I
Sbjct: 3 AKLELRNINKSYGKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQPDSGKII 62
Query: 62 IDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVR 121
ID K V +PP +R++AMVFQ+YALYP+M V+DNIAFPL++ + I RRV
Sbjct: 63 IDGKDVTK------LPPNKRNIAMVFQNYALYPNMNVFDNIAFPLRMNHF--RNISRRVH 114
Query: 122 EVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAE 181
E A+ LG+ LL +K ++SGGQ+QRVAL RAI+R P +FL+DEPLSNLDA++R R E
Sbjct: 115 ETAQKLGIENLLDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSNLDARVRYAARNE 174
Query: 182 LKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIG 241
LKK+Q++L T ++VTHDQ EA +GDRI V++ G+ +Q+G+ +E+YN P +V FIG
Sbjct: 175 LKKIQQELDQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEELYNDPKTVWVGDFIG 234
Query: 242 SPPMNFL 248
PMNF+
Sbjct: 235 DYPMNFI 241
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 257 bits (651), Expect = 1e-67
Identities = 129/261 (49%), Positives = 180/261 (68%), Gaps = 6/261 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M E+ + N+ K + DF A+ ++L++++GEFL +LGPSGCGK+T LR+IAGLE PT G I
Sbjct: 1 MGEISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
I K V + P +R + VFQ++AL+PH+TV+ N+A L+LRK PK E+ +RV
Sbjct: 61 VIAGKQVTND------PVWKRKIGFVFQNFALWPHLTVFKNVAMGLELRKTPKDELQQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ M+ L L R P +LSGGQ+QRVAL RAI+ +P V L+DEPLS LD LR M+
Sbjct: 115 TKALRMVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQV 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
ELK LQR LG+TT++VTHDQ EA+++ DR+ VMNRG ++Q+ TPD +YNKP++ +VA F+
Sbjct: 175 ELKALQRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNIYNKPVSEYVARFV 234
Query: 241 GSPPMNFLTATVSSDGFLDFG 261
G T S++ LD G
Sbjct: 235 GEAFFFKGEVTGSNELVLDGG 255
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 257 bits (650), Expect = 1e-67
Identities = 136/287 (47%), Positives = 194/287 (67%), Gaps = 12/287 (4%)
Query: 8 NVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLV 67
+V K+FG FTA+KE+SL I+ GEF+ LGPSGCGKTT LR IAGL+ PT G I+ + + +
Sbjct: 39 HVVKQFGSFTALKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDLPTSGTIHQNQQAI 98
Query: 68 ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEML 127
F+PP++RD +VFQSYAL+P++TV +NIA L+ + + ++ +V + EM+
Sbjct: 99 T------FLPPEQRDFGIVFQSYALFPNLTVEENIAIGLRNQGMSVRDALEKVEQWLEMI 152
Query: 128 GLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQR 187
GL ++ P +LSGGQ+QRVAL RA+ P + L+DEPLS LDAK+R +R E+ +LQR
Sbjct: 153 GLATSAQKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSALDAKVRTHLREEICQLQR 212
Query: 188 QLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNF 247
+LG+TTI VTHDQ EA+TM DRI VMN G ++QVGTP E+Y KP + FVA F+G+ MNF
Sbjct: 213 KLGITTIMVTHDQEEALTMADRIVVMNHGVIEQVGTPQEIYQKPASRFVAEFVGT--MNF 270
Query: 248 LTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDI 294
+ +++S L E + L K + G++ +RPE++
Sbjct: 271 IPVSMASSQQLRIAESLIALPK----IENYTPCQGEQFDLAVRPENL 313
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 257 bits (649), Expect = 2e-67
Identities = 142/363 (39%), Positives = 227/363 (62%), Gaps = 24/363 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+K+ ++ K + +F ++E+S ++++GE ++LGPSG GKT L +IAG+ P G+I +
Sbjct: 2 LKVESISKDYREFK-LREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRILLR 60
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ + +PP++R+ + + Q+YAL+PHMTV+DNIAF LKLRK+P++E+ R+VREV
Sbjct: 61 GEDITG------LPPEKRNFSYIPQNYALFPHMTVFDNIAFGLKLRKIPRKEVARKVREV 114
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
AE LG+ LL RKPR LSGG++QRVA+ RA++ +P++ LMDEP +NLD + + K+ E+K
Sbjct: 115 AESLGIDHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIREMK 174
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+ +++ G T I+VTH EA+++GDR+ +M RG L QVG +V++KP + VA F+G
Sbjct: 175 RWRKEFGFTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEVARFLG-- 232
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVE 303
+ V++ L G+ R++L ++ + +V GIRPEDI
Sbjct: 233 -FENIIEGVANGRILKVGDLRIELPRE----------VWGKVRVGIRPEDITIFMEGVKT 281
Query: 304 EPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVE----EGQEAEVFFDMKKA 359
N+ +A+V+ +E+LG + L LG II A + S++E EG+E F
Sbjct: 282 SARNVFKARVEGIEDLGALVKLTLNLGGIILRAFITRSSLIELGIREGEEVYASFKASAI 341
Query: 360 HVF 362
HVF
Sbjct: 342 HVF 344
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 256 bits (648), Expect = 2e-67
Identities = 150/336 (44%), Positives = 211/336 (62%), Gaps = 15/336 (4%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+++ NV ++FGDFTAV +SL I GEF LLGPSGCGKTT LRM+AG ++P G+I ++
Sbjct: 6 LEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLN 65
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ +A E P++R V VFQSYAL+PHM+V NIAFPLK+ V K EID RV +
Sbjct: 66 GQDLAGVE------PEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKSEIDARVEQA 119
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
+ + L + R P +LSGGQRQRVA+ RA++ RP++ L+DEPLS LDAKLR +M+ EL
Sbjct: 120 LKDVRLADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELI 179
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
LQ+ +G+T +YVTHDQ EA+ + RIAVMN+G ++Q+ P+ +Y+ P + FVA FIG
Sbjct: 180 NLQKDVGITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETIYSFPRSRFVADFIGQ- 238
Query: 244 PMNFLTATVSSDGFLDFGEFRLKL--LKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIR 301
N L ATV + +D R+ L L + + + G+ + +RPE I A +
Sbjct: 239 -CNLLDATVEA---VDGERVRIDLRGLGEVQALKSFDAQPGEACVLTLRPEKIRLAQSVT 294
Query: 302 VEEPENIVRAKVDIVENLGGEK--IVHLRLGDIIFT 335
+ E R +V + LG IV L G+ + T
Sbjct: 295 ADSDEVHFRGRVAELLYLGDVTLYIVELENGERLET 330
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 256 bits (647), Expect = 3e-67
Identities = 126/249 (50%), Positives = 178/249 (70%), Gaps = 8/249 (3%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
++L ++ K +G T + + +L I +GEF+ +LGPSGCGKTT LR++AGLEE G I +D
Sbjct: 20 IELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIILD 79
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ + + VP ++R + VFQSYAL+PHMT+++N+AF L+++KVP +EI RV E
Sbjct: 80 GEDITN------VPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEA 133
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L E+ RKP +LSGGQ+QR+A+ RA++ +PKV L+DE LS LD KLR +M+ ELK
Sbjct: 134 LRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQELK 193
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
LQRQLG+T I+VTHDQ EA+TM DRI ++ +G++ Q G+P E+Y P N FVA FIG
Sbjct: 194 MLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEDPANLFVARFIGE- 252
Query: 244 PMNFLTATV 252
+N ATV
Sbjct: 253 -INVFEATV 260
>pir||T35802 probable polyamine ABC-transporter ATP-binding protein -
Streptomyces coelicolor >gi|3413309|emb|CAA20221.1|
(AL031225) putative polyamine ABC-transporter
ATP-binding p rotein [Streptomyces coelicolor A3(2)]
Length = 397
Score = 254 bits (643), Expect = 9e-67
Identities = 146/380 (38%), Positives = 222/380 (58%), Gaps = 28/380 (7%)
Query: 3 EVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYI 62
+V+L + K +G FTAV L L + G F LLG SGCGKTTTLRMIAGLEEP+ G +++
Sbjct: 18 DVRLAGISKTYGSFTAVHPLDLTVPQGSFFALLGASGCGKTTTLRMIAGLEEPSGGTVHL 77
Query: 63 DDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVRE 122
D+ V +PP +R V VFQSYAL+PH+ +Y+N+AF L+ R + + + ++V E
Sbjct: 78 GDQDVTA------LPPYKRPVNTVFQSYALFPHLDIYENVAFGLRRRGI--KSVKKQVGE 129
Query: 123 VAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAEL 182
+ +++ L E ++KP +LSGGQ+QRVA+ RA+I PKV L+DEPL LD KLR +M+ EL
Sbjct: 130 MLDLVQLGEQARKKPHQLSGGQQQRVAVARALINHPKVLLLDEPLGALDLKLRRQMQLEL 189
Query: 183 KKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS 242
K++Q ++G+T ++VTHDQ EAMTM D++AVMN G ++Q+G P ++Y P TFVA F+G+
Sbjct: 190 KRIQTEVGITFVHVTHDQEEAMTMADQVAVMNAGRVEQLGAPADLYENPRTTFVANFLGT 249
Query: 243 PPMNFLTATVSSDGFLDFGEFRLKLLKDQFEV----LEENNLIGKEVIFGIRPEDIYDAS 298
N + A V + D +K D+ + G +V+ G+RPE I S
Sbjct: 250 --SNLIEAEVDTRSGDD---VVVKAAGDKLVLPGARCSAPAKTGGKVLVGVRPEKI---S 301
Query: 299 FIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQE--------A 350
++ +I + I +G + + ++ A P+ V + + A
Sbjct: 302 LTHADDAGSIPEGRNRITGRIGSTSFIGVSTQYVVDCAACPEFEVYAQNIDRDPRLTPGA 361
Query: 351 EVFFDMKKAHVFNKTNERAI 370
EV AH F ++++
Sbjct: 362 EVVLHWNPAHTFGLDADQSV 381
>gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 324
Score = 253 bits (640), Expect = 2e-66
Identities = 125/258 (48%), Positives = 185/258 (71%), Gaps = 6/258 (2%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+LI++ KK+G + ++ +I+ GEF V+LGPSG GK+T L+++AG+E+ G+I D
Sbjct: 3 VELIDIVKKYGKNIVINGITEKIETGEFFVILGPSGEGKSTLLKILAGIEKLDKGKIIAD 62
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ D PP++R+VAMVFQ+YALYP+M+V DNIAFPLK+R + K+EI RV +
Sbjct: 63 GADITDK------PPEKRNVAMVFQNYALYPNMSVRDNIAFPLKMRGMKKEEIIERVEKA 116
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
A++LG++E+L +K ++SGGQ+QRVAL RAI+R P FL+DEPLSNLDA++R R ELK
Sbjct: 117 AKLLGISEILDKKVTQISGGQQQRVALARAIVRNPSYFLLDEPLSNLDARVRTTARGELK 176
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
++Q++L T IYVTHDQ EA+++ DRIA++++G+ +QV P +Y P +VA F+G
Sbjct: 177 RIQKELKGTFIYVTHDQKEALSLADRIAILHKGKFEQVSDPKTLYEYPKTKWVAQFVGEF 236
Query: 244 PMNFLTATVSSDGFLDFG 261
PMNFL + + + G
Sbjct: 237 PMNFLPGELMKEKAQEIG 254
>sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|96440|pir||A40840 spermidine/putrescine transport
protein potA [validated] - Escherichia coli
>gi|147326|gb|AAC37038.1| (M64519) transport protein
[Escherichia coli] >gi|1651555|dbj|BAA35948.1| (D90748)
Spermidine/putrescine transport protein A [Escherichia
coli] >gi|1787370|gb|AAC74210.1| (AE000212) ATP-binding
component of spermidine/putrescine transport
[Escherichia coli K12]
Length = 378
Score = 253 bits (640), Expect = 2e-66
Identities = 152/346 (43%), Positives = 210/346 (59%), Gaps = 24/346 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+L + K F + +L L I +GEFL LLGPSGCGKTT LR+IAGLE G+I +D
Sbjct: 18 VQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLD 77
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
++ + VP + R V VFQSYAL+PHMTV++N+AF L+++K P EI RV E
Sbjct: 78 NEDITH------VPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEA 131
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L +RKP +LSGGQ+QRVA+ RA++ +P++ L+DE LS LD KLR +M+ ELK
Sbjct: 132 LRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELK 191
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
LQR+LG+T ++VTHDQ EA+TM DRI VM G ++Q GTP E+Y +P N FVAGFIG
Sbjct: 192 ALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGE- 250
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-IGKEVIFGIRPEDIYDASFIRV 302
+N ATV LD R + + + + G+++ +RPED +RV
Sbjct: 251 -INMFNATVIER--LDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPED------LRV 301
Query: 303 EE--PENIVRAKVDIV--ENLGG---EKIVHLRLGDIIFTAKFPQE 341
EE +N + V N G E +V L G ++ ++F E
Sbjct: 302 EEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNE 347
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 250 bits (633), Expect = 1e-65
Identities = 145/359 (40%), Positives = 212/359 (58%), Gaps = 27/359 (7%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+L + K + T +++++L I+ GEF LLGPSG GKTT +R+IAGL P G + I+
Sbjct: 6 VELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVRIN 65
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
E +PP R+V MVFQ+ AL+PH+ V++N+A+ L+LRK+P+ EI RV
Sbjct: 66 G------EDCTSLPPYRRNVGMVFQNLALFPHLNVFENVAYGLRLRKIPEGEIKDRVYRY 119
Query: 124 AEMLGLTELL--KRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAE 181
E++ L + KRK +LSGGQ+QRVA+ RA++ P + L+DEPL LD K+R M +E
Sbjct: 120 LELVNLDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHMISE 179
Query: 182 LKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIG 241
LK++Q+ LG T IYVTHDQ EA+ + DR+AV+N G + Q+GTP E+Y +P FVA FIG
Sbjct: 180 LKRIQKTLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRFVASFIG 239
Query: 242 SPPMNFLTA-TVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
NFL A V+ + + G+ R+ L +E IRPE +
Sbjct: 240 E--TNFLEARVVNGEVITEIGKVRVFGLDG-----------AREFCISIRPEKLKIN--- 283
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKA 359
++ EN A V+ + LG ++ LR GD++ A P + V EG+ V +D + A
Sbjct: 284 --QQAENTFEAVVEEIGYLGSFLMLKLRAGDVVVKAFAPPQENVREGERVIVGWDSRDA 340
>pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA0687 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658105|gb|AAF96587.1| (AE004398) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 351
Score = 250 bits (632), Expect = 2e-65
Identities = 121/242 (50%), Positives = 174/242 (71%), Gaps = 6/242 (2%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V L N+ K+FG T + L LEIK G + LLGPSGCGKTT LR++AGLE+PT GQI+ID
Sbjct: 7 VVLKNICKRFGSNTVIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFID 66
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ V E+ I ++RD+ MVFQSYAL+PHM++Y+N+A+ LK+ K+P +E+ +RV E
Sbjct: 67 GEDVT--ERSI----QQRDICMVFQSYALFPHMSLYENVAYGLKMLKLPSEEVRQRVDEA 120
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
+++ L + +R ++SGGQ+QRVAL RA++ +PKV L DEPLSNLDA LR MR ++
Sbjct: 121 LKIVDLEGMGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIR 180
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+LQ++ +T++YVTHDQ EA + D + VM +G++ Q+GTP E+Y P + F+A F+G
Sbjct: 181 ELQQRFDITSLYVTHDQAEAFAVSDTVIVMKQGDIMQIGTPQELYKAPKSMFMANFMGEA 240
Query: 244 PM 245
M
Sbjct: 241 NM 242
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 248 bits (627), Expect = 7e-65
Identities = 145/370 (39%), Positives = 226/370 (60%), Gaps = 24/370 (6%)
Query: 1 MAEVKLINVWKKF--GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
M + + NV K F G A+ +++ I++GE +LGPSG GKTT +R+IAGL+ P+ G
Sbjct: 1 MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
++Y DD+LVA K + VPP++R + MVFQ++ALYP++T ++NIAFPL K+ K+EI +
Sbjct: 61 ELYFDDRLVASNGK-LIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRK 119
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
RV EVA++L + +L PRELSGGQ+QRVAL RA+++ P + L+DEP SNLDA++R
Sbjct: 120 RVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA 179
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
RA +K++Q +LGVT + V+HD + + DR+ V+ +G+L QVG P+++Y+ P++ VA
Sbjct: 180 RALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVAS 239
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
IG +N L V+++G + G R + ++ I GIRPED+ +
Sbjct: 240 LIGE--INELEGKVTNEGVV-IGSLRFPV-----------SVSSDRAIIGIRPEDVKLSK 285
Query: 299 FIRVEEPENIV-RAKVDIVENLGG---EKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFF 354
+ ++ +V + KV ++ GG I L + IFT + + G+E V+
Sbjct: 286 DVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTY---SDHPIHSGEEVLVYV 342
Query: 355 DMKKAHVFNK 364
K VF K
Sbjct: 343 RKDKIKVFEK 352
>pir||C81179 spermidine/putrescine ABC transporter, ATP-binding protein NMB0610
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225840|gb|AAF41037.1| (AE002416)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 419
Score = 245 bits (619), Expect = 6e-64
Identities = 146/336 (43%), Positives = 203/336 (59%), Gaps = 23/336 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+K+ + KKFGD AV + L+I E LLG SG GK+T LRM+AG+E P G+I +D
Sbjct: 58 LKIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMESPNQGKIILD 117
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ + + P +R + M+FQSYAL+PHMTV NIAF LK K+PK EI RV E+
Sbjct: 118 GQDITK------LAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEM 171
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ +T+ KRKP +LSGGQ+QR+AL R++ +RPK+ L+DEPL LD KLR + + EL
Sbjct: 172 LRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELV 231
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
Q+GVT I VTHDQ EAMTM RIA+M+ G+LQQVGTP +VY+ P + F A FIG
Sbjct: 232 NTLEQVGVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIGE- 290
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIG---KEVIFGIRPEDIYDASFI 300
N V D D+ + L++ + ++ L G +++ IRPEDI +
Sbjct: 291 -TNIFDGVVIED-HADYAVIECEGLENHVRI--DHGLGGPSEQDLWVSIRPEDI----DL 342
Query: 301 RVEEPE-----NIVRAKVDIVENLGGEKIVHLRLGD 331
E+PE N + V + LG I H++LG+
Sbjct: 343 YKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLGN 378
>pir||E71296 probable spermidine/putrescine ABC transporter, ATP-binding protein
(potA) - syphilis spirochete >gi|3322953|gb|AAC65627.1|
(AE001240) spermidine/putrescine ABC transporter,
ATP-binding protein (potA) [Treponema pallidum]
Length = 379
Score = 245 bits (618), Expect = 8e-64
Identities = 140/307 (45%), Positives = 191/307 (61%), Gaps = 17/307 (5%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V + V K +G AV ++ I+ GEF +LGPSGCGKTT LR+IAG E+P G + D
Sbjct: 10 VTIDQVSKAYGHCLAVDRATVHIRQGEFFSILGPSGCGKTTLLRIIAGFEQPDSGDLTFD 69
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
V + V +R VFQSYAL+PH++VY+NIAFPL+L+++ K I RV E
Sbjct: 70 HVSV------LGVGANKRRSNTVFQSYALFPHLSVYENIAFPLRLKRLSKNLIRERVHEY 123
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ L E L +KP +LSGGQ+QRVA+ RA++ P V L+DEPLS LDAKLR + EL
Sbjct: 124 LHLVQLDEHLHKKPHQLSGGQQQRVAIARALVCEPGVLLLDEPLSALDAKLRSNLLIELD 183
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
L Q G+T +++THDQ EA+++ DRIAVMN+G++ Q+GTP E+Y +P FVA FIG
Sbjct: 184 TLHDQTGITFVFITHDQSEALSVSDRIAVMNKGKILQIGTPYEIYEQPATDFVAKFIGE- 242
Query: 244 PMNFLTATVSSDGFLDFGEFRLKL----LKDQFEVLEENNL-IGKEVIFGIRPEDIYDAS 298
N +TV S ++ EF L L L V +N + G+ V F +RPE I+
Sbjct: 243 -TNSFLSTVVSCTAIENEEFMLSLQVPELDRTLTVTADNPIDPGRRVCFTVRPEKIH--- 298
Query: 299 FIRVEEP 305
I +EEP
Sbjct: 299 -ISLEEP 304
>gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 314
Score = 244 bits (617), Expect = 1e-63
Identities = 116/245 (47%), Positives = 174/245 (70%), Gaps = 6/245 (2%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+ L V K FG F + +SL ++ GEF V+LG SG GKTT LR+IAGLE+ + G+I I
Sbjct: 2 ITLKEVTKFFGSFKVIDSISLNVEKGEFFVILGKSGSGKTTLLRLIAGLEKVSSGKILIS 61
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
++ V D +PP +RD+ MVFQSYALYP+ V++N+ L+ ++ K++ + R+ E+
Sbjct: 62 NEDVTD------LPPSKRDIGMVFQSYALYPNKKVFENLMIALENSEINKKDKEERIIEI 115
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ L + L+ + P +LSGGQ+QRVA+ +A+++RPKV LMDEPLSNLD +LR R +K
Sbjct: 116 SKQLEIYHLMDKYPAQLSGGQQQRVAIAKALVKRPKVLLMDEPLSNLDVQLRYSARKLIK 175
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
K+Q++ +TTIYVTHD EA+ + DRI V+++G L QVG P+++YN PL+ VA +G+P
Sbjct: 176 KVQKEFNITTIYVTHDSNEALAIADRIGVIDKGRLLQVGIPEDIYNNPLSKEVASLVGNP 235
Query: 244 PMNFL 248
PM+F+
Sbjct: 236 PMSFV 240
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 244 bits (617), Expect = 1e-63
Identities = 128/292 (43%), Positives = 183/292 (61%), Gaps = 15/292 (5%)
Query: 3 EVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYI 62
E+K ++ + + ++L+IK EF+ LLGPSGCGKTT ++++ G G+IY
Sbjct: 7 EIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEIYF 66
Query: 63 DDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVRE 122
K ++ P +R++ VFQ+YAL+PHM V+DNI+F L+++K PK I +V+
Sbjct: 67 FSKEISKTS------PNKREINTVFQNYALFPHMNVFDNISFGLRMKKTPKDIIKEKVKT 120
Query: 123 VAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAEL 182
++G+ + R ELSGGQ+QRVA+ RA++ PK+ L+DEPLS LD K+R +M+ EL
Sbjct: 121 SLSLIGMPKYAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQKEL 180
Query: 183 KKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS 242
KK+QRQLG+T IYVTHDQ EA+TM DRI VMN G + Q+GTP+E+YN+P FVA FIG
Sbjct: 181 KKIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEIYNEPKTKFVADFIGE 240
Query: 243 PPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDI 294
N T E + LL +FE L++ + V IRPED+
Sbjct: 241 --SNIFDGTYKK-------ELVVSLLGHEFECLDKGFEAEEAVDLVIRPEDV 283
>pir||F64751 probable ABC-type transport protein b0262 - Escherichia coli
>gi|1552831|gb|AAB08683.1| (U70214) hypothetical
[Escherichia coli] >gi|1786457|gb|AAC73365.1| (AE000134)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 352
Score = 244 bits (616), Expect = 1e-63
Identities = 124/262 (47%), Positives = 180/262 (68%), Gaps = 9/262 (3%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+L NV K+FG T + ++L I G+ + LLGPSGCGKTT LR++AGLE+P+ GQI+ID
Sbjct: 11 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 70
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ V + I ++RD+ MVFQSYAL+PHM++ +N+ + LK+ VP+ E+ RV+E
Sbjct: 71 GEDVT--HRSI----QQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEA 124
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L R ++SGGQ+QRVAL RA+I +PKV L DEPLSNLDA LR MR +++
Sbjct: 125 LAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIR 184
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+LQ+Q +T++YVTHDQ EA + D + VMN+G + Q+G+P ++Y +P + F+A F+G
Sbjct: 185 ELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD- 243
Query: 244 PMNFLTATVSSDGFLDFGEFRL 265
N AT SDG++D + L
Sbjct: 244 -ANLFPATF-SDGYVDIYGYHL 263
>sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
Length = 348
Score = 244 bits (616), Expect = 1e-63
Identities = 124/262 (47%), Positives = 180/262 (68%), Gaps = 9/262 (3%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+L NV K+FG T + ++L I G+ + LLGPSGCGKTT LR++AGLE+P+ GQI+ID
Sbjct: 7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 66
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ V + I ++RD+ MVFQSYAL+PHM++ +N+ + LK+ VP+ E+ RV+E
Sbjct: 67 GEDVT--HRSI----QQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEA 120
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L R ++SGGQ+QRVAL RA+I +PKV L DEPLSNLDA LR MR +++
Sbjct: 121 LAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIR 180
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+LQ+Q +T++YVTHDQ EA + D + VMN+G + Q+G+P ++Y +P + F+A F+G
Sbjct: 181 ELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD- 239
Query: 244 PMNFLTATVSSDGFLDFGEFRL 265
N AT SDG++D + L
Sbjct: 240 -ANLFPATF-SDGYVDIYGYHL 259
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 244 bits (616), Expect = 1e-63
Identities = 136/294 (46%), Positives = 191/294 (64%), Gaps = 16/294 (5%)
Query: 1 MAEVKLINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
M V+L + + FG T AV ++S+ I DGEF L+GPSGCGKTTTLR+IAG E P G+
Sbjct: 1 MTSVELQGLVRAFGSTTTAVDDVSVSIADGEFFTLVGPSGCGKTTTLRLIAGFETPDRGE 60
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPK-QEIDR 118
I D+ V+ VPP++RDV +VFQSYAL+PHMTV +N+A+ L+ R+ P +
Sbjct: 61 IVFGDRSVSG------VPPEDRDVGIVFQSYALFPHMTVRENVAYGLRFREPPGGASTEE 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
RV E+ ++ L R+P LSGGQ+QRVAL RA+ P V L+DEP+S LDA+LR ++
Sbjct: 115 RVSELLSLVDLAGTGDREPAALSGGQQQRVALARALAPGPSVLLLDEPMSALDARLRDRL 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R +K++QR+L +TT+YVTHDQ EA+++ DR+AVM G + QVGTP+ VY +P + FVA
Sbjct: 175 RGTIKEIQRELDITTVYVTHDQAEALSISDRVAVMRDGAVVQVGTPEAVYREPSSRFVAE 234
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
F+G N ++ T L+ G + + FEV E + +V G+RPE
Sbjct: 235 FVGE--NNVVSGTAVP---LETGGSSVSVNGVTFEVSE---CVTGDVAVGLRPE 280
>pir||B83571 probable ATP-binding component of ABC transporter PA0603 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946476|gb|AAG03992.1|AE004496_8 (AE004496) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 369
Score = 243 bits (615), Expect = 2e-63
Identities = 119/228 (52%), Positives = 163/228 (71%), Gaps = 6/228 (2%)
Query: 14 GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKG 73
G+ VK+L+L+I+ GEFL LLGPSG GKTT+L M+AG E PT G+I + + + +
Sbjct: 22 GETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLAGRSINN---- 77
Query: 74 IFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELL 133
VPP +RD+ MVFQ+YAL+PHMTV +N+AFPL +R + K ++ RV+ M+ L
Sbjct: 78 --VPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSMVQLDAFA 135
Query: 134 KRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTT 193
R P +LSGGQ+QRVAL RA++ P++ LMDEPL LD +LR M+ E+K L ++LGVT
Sbjct: 136 GRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTV 195
Query: 194 IYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIG 241
+YVTHDQ EA+TM DR+AV ++GE+QQ+ P +Y +P NTFVA FIG
Sbjct: 196 VYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVANFIG 243
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 243 bits (614), Expect = 2e-63
Identities = 138/344 (40%), Positives = 204/344 (59%), Gaps = 22/344 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
VK+ V K+F + AV +SL I GE LLG SG GK+T LRM+AG E PT G+I++D
Sbjct: 23 VKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLD 82
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ + D +PP ER + M+FQSYAL+PHM+V NIAF LK +PK EID RV E+
Sbjct: 83 GQDITD------LPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEM 136
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
+++ +T+ KRKP +LSGGQRQRVAL R++ +RPK+ L+DEP+ LD KLR +M+ EL
Sbjct: 137 LKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELV 196
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
++ ++GVT + VTHDQ EAMTM RIA+M+ G ++Q+G+P ++Y P + V FIG+
Sbjct: 197 EIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGN- 255
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLE--ENNLIGKEVIFGIRPEDIYDASFIR 301
+N + D D L++ + K + + +RPE + I
Sbjct: 256 -VNLFDGVLVED-VQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKV----MIS 309
Query: 302 VEEPENIVRA-------KVDIVENLGGEKIVHLRLGDIIFTAKF 338
++P+N+ A V + LGG + +++L + F
Sbjct: 310 AQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAF 353
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 243 bits (613), Expect = 3e-63
Identities = 143/375 (38%), Positives = 222/375 (59%), Gaps = 17/375 (4%)
Query: 1 MAEVKLINVWKKFG----DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
M +++ N+ K F + AV +S+ I G +LGPSG GKTT LR+IAGLEEPT
Sbjct: 1 MTTIRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPT 60
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G IY D++ V+ P + + + P++R +AMVFQ++ALYP+MTV+DNIAFPLKL KVPK +I
Sbjct: 61 SGYIYFDNEAVSSPRR-VMMSPEKRGIAMVFQNWALYPNMTVFDNIAFPLKLAKVPKDKI 119
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
+ +V+EV+E LGL+ +L R P+ELSGGQ QR A+ RA+++ PKV L+DEP SNLDA++R
Sbjct: 120 ENKVKEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFSNLDAQIRE 179
Query: 177 KMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFV 236
RA ++K+QR+ +TT+ V+HD + + ++ V+ G+ Q+GTP E+Y P +
Sbjct: 180 SARALVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPTEIYEYPATDLI 239
Query: 237 AGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYD 296
A G +N + A + + + LK+ + E+ ++N ++ G+RP+D+
Sbjct: 240 ARLTGE--INLIQAKIIENNAI---IANLKVPLNNMELKGQSN-----IVIGLRPDDL-T 288
Query: 297 ASFIRVEEPENIVRAKVDIVE-NLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
S +++ ++ KV +V G KIV + D E +E G E +
Sbjct: 289 LSDTLLDKYIDMGIVKVKLVSYGAGIFKIVVSPITDENIDIIVDAEEPLETGIETHLLAK 348
Query: 356 MKKAHVFNKTNERAI 370
K +F+ I
Sbjct: 349 PNKVKIFDLNGSNLI 363
>pir||G81926 probable polyamine permease ATP-binding protein NMA0816 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379535|emb|CAB84098.1| (AL162754) putative
polyamine permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 374
Score = 242 bits (610), Expect = 7e-63
Identities = 144/329 (43%), Positives = 198/329 (59%), Gaps = 23/329 (6%)
Query: 11 KKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADP 70
KKFGD AV + L+I E LLG SG GK+T LRM+AG+E P G+I +D + +
Sbjct: 20 KKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMENPNQGKIILDGQDITK- 78
Query: 71 EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLT 130
+ P +R + M+FQSYAL+PHMTV NIAF LK K+PK EI RV E+ ++ +T
Sbjct: 79 -----LAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQMT 133
Query: 131 ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLG 190
+ KRKP +LSGGQ+QR+AL R++ +RPK+ L+DEPL LD KLR + + EL Q+G
Sbjct: 134 KFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQVG 193
Query: 191 VTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTA 250
VT I VTHDQ EAMTM RIA+M+ G+LQQVGTP +VY+ P + F A FIG N
Sbjct: 194 VTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIGE--TNIFDG 251
Query: 251 TVSSDGFLDFGEFRLKLLKDQFEVLEENNLIG---KEVIFGIRPEDIYDASFIRVEEPE- 306
V D D+ + L++ + ++ L G +++ IRPEDI + E+PE
Sbjct: 252 VVIED-HADYAVIECEGLENHVRI--DHGLGGPSEQDLWVSIRPEDI----DLYKEKPEY 304
Query: 307 ----NIVRAKVDIVENLGGEKIVHLRLGD 331
N + V + LG I H++L +
Sbjct: 305 LGDYNWAKGTVKEIAYLGSFAIYHIKLAN 333
>dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-binding protein in
thrW-argF intergenic region. [Escherichia coli]
Length = 348
Score = 241 bits (608), Expect = 1e-62
Identities = 123/262 (46%), Positives = 179/262 (67%), Gaps = 9/262 (3%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+L NV K+FG T + ++L I G+ + LLGPSGCGKTT LR++AGLE+P+ GQI+ID
Sbjct: 7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 66
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ V + I ++RD+ MVFQSYAL+PHM++ +N+ + LK+ VP+ E+ RV+E
Sbjct: 67 GEDVT--HRSI----QQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEA 120
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
M+ L R ++SGGQ+QRVA RA+I +PKV L DEPLSNLDA LR MR +++
Sbjct: 121 LAMVDLEGFEDRFVDQISGGQQQRVAWPRALILKPKVLLFDEPLSNLDANLRRSMRDKIR 180
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+LQ+Q +T++YVTHDQ EA + D + VMN+G + Q+G+P ++Y +P + F+A F+G
Sbjct: 181 ELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD- 239
Query: 244 PMNFLTATVSSDGFLDFGEFRL 265
N AT SDG++D + L
Sbjct: 240 -ANLFPATF-SDGYVDIYGYHL 259
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 241 bits (608), Expect = 1e-62
Identities = 140/363 (38%), Positives = 222/363 (60%), Gaps = 24/363 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+++ +V K + +F ++++S ++K E ++LGPSG GKT L +IAG+ EP G+I ++
Sbjct: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
V PP++R++A + Q YAL+PHMTVYDNIAF LKLR++ +QEIDR+V+E+
Sbjct: 61 GVDVTS------YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEI 114
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
+++LG+ LL RKPR LSGG++QRVA+ RA++ P++ L+DEP +NLD + + + E+K
Sbjct: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+++LG T+++VTH EA+++GDR+ VM RG L QVG EV++ P++ VA F+G
Sbjct: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG-- 232
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVE 303
+ V+ L+ ++ L ++ GK V G+RPEDI ++
Sbjct: 233 -FENIIEGVAKGNILEANGVKITL---------PISVEGK-VRIGVRPEDIILSTEPVKT 281
Query: 304 EPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVE----EGQEAEVFFDMKKA 359
N RA+V +E LG V+L++G I A + S++E EG+E V F
Sbjct: 282 SARNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAI 341
Query: 360 HVF 362
VF
Sbjct: 342 KVF 344
>pir||G83605 probable ATP-binding component of ABC transporter PA0326 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946173|gb|AAG03715.1|AE004470_9 (AE004470) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 349
Score = 240 bits (607), Expect = 2e-62
Identities = 126/239 (52%), Positives = 168/239 (69%), Gaps = 8/239 (3%)
Query: 18 AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVP 77
A+ ++SL+I EF LLGPSGCGKTT LR+IAG E+P+ G I +L + +G+ P
Sbjct: 23 ALDDVSLDIHANEFFTLLGPSGCGKTTLLRLIAGFEQPSSGSI----RLYGEHMEGL--P 76
Query: 78 PKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKP 137
P R V VFQSYAL+PHM+V DNI F L+++ P+ EID V + +++ L E+ KR+
Sbjct: 77 PFRRPVNTVFQSYALFPHMSVADNIGFGLEMQGRPRSEIDATVSRMLDLVKLPEVGKRRA 136
Query: 138 RELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVT 197
+LSGGQ+QR+AL RA+ RPKV L+DE LS LD KLR +M+ ELK+LQ + G+T I+VT
Sbjct: 137 DQLSGGQQQRIALARALASRPKVLLLDESLSALDLKLRKEMQIELKRLQHETGITFIFVT 196
Query: 198 HDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDG 256
HDQ EA+TM DRIAVM++G++ QVGTP ++Y PLN VA FIG NFL +DG
Sbjct: 197 HDQEEALTMSDRIAVMSKGKVLQVGTPSDIYEAPLNRAVADFIGE--TNFLEGQADADG 253
>gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas putida]
Length = 282
Score = 240 bits (605), Expect = 3e-62
Identities = 126/266 (47%), Positives = 182/266 (68%), Gaps = 10/266 (3%)
Query: 2 AEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIY 61
A++K+ N+ K+FG FTA+ ++SL+I GE + LLGPSGCGKTT LR IAGLE G +Y
Sbjct: 8 AQMKVRNIHKRFGAFTALNDVSLDIAAGELVCLLGPSGCGKTTLLRCIAGLERQDRGTLY 67
Query: 62 IDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVR 121
I ++ +++ +PP+ RD ++FQSYAL+P++TV NIA+ L +++ +RV
Sbjct: 68 IGERDISE------LPPQARDYGILFQSYALFPNLTVEANIAYGLT--GSGREQARQRVT 119
Query: 122 EVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAE 181
E+ E++GL K+ P +LSGGQ+QRVAL RA+ P + L+DEP+S LDA++R + E
Sbjct: 120 EMLELVGLAGSEKKYPGQLSGGQQQRVALARALAPSPSLLLLDEPMSALDARVREHLCTE 179
Query: 182 LKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIG 241
L++LQRQLG+TT+ VTH+Q EAM M DRIAVMN G+++Q TP E+Y++P FVA F+G
Sbjct: 180 LRQLQRQLGITTLMVTHNQDEAMLMADRIAVMNNGQVEQYATPQEIYDQPATPFVAEFVG 239
Query: 242 SPPMNFLTATVSSDGFLDFGEFRLKL 267
N+L SSD G ++L
Sbjct: 240 QG--NWLPFQRSSDSHAQVGGMNMRL 263
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 239 bits (604), Expect = 3e-62
Identities = 128/293 (43%), Positives = 183/293 (61%), Gaps = 14/293 (4%)
Query: 6 LINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDK 65
L N+ K FG + L L IK G + LLGPSGCGKTT LR++AGLE PT GQI+ID +
Sbjct: 9 LKNITKAFGKAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGE 68
Query: 66 LVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAE 125
V + RD+ +VFQSYAL+PHM++ DN+ + LK++ + K+E +RV+E E
Sbjct: 69 DVTKSSI------QNRDICIVFQSYALFPHMSIGDNVGYGLKMQGIGKEERAQRVKEALE 122
Query: 126 MLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKL 185
++ L R ++SGGQ+QRVAL RA++ +PKV L DEPLSNLDA LR MR ++++L
Sbjct: 123 LVDLAGFEDRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIREL 182
Query: 186 QRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPM 245
Q++LG+T++YVTHDQ EA + D + VMN+G++ Q E+Y +P + F+A F+G +
Sbjct: 183 QQRLGITSLYVTHDQTEAFAVSDEVIVMNKGKIMQKAPAKELYLRPNSLFLANFMGESSI 242
Query: 246 NFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDAS 298
DG L+ G + + + NL E + GIRPE IY A+
Sbjct: 243 --------FDGKLENGVADINGYSVPLKDAAQFNLPDGECLVGIRPEAIYLAA 287
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 237 bits (599), Expect = 1e-61
Identities = 142/333 (42%), Positives = 197/333 (58%), Gaps = 23/333 (6%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+++ N+ K + AV ++SL I GE LLG SGCGK+T LRM+AG E+P+ GQI +D
Sbjct: 47 LEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLD 106
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
++ VPP R + M+FQSYAL+PHMTV NIAF LK K+PK EI RV E+
Sbjct: 107 GVDLSQ------VPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEM 160
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ + E KRKP +LSGGQRQRVAL R++ +RPK+ L+DEP+ LD KLR +M+ E+
Sbjct: 161 LGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVV 220
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
+ ++GVT + VTHDQ EAMTM RIA+MNRG+ Q+G P+E+Y P + A FIGS
Sbjct: 221 DILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGS- 279
Query: 244 PMNFLTATV---SSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
+N + DG + + LK + +N+ V +RPE I +
Sbjct: 280 -VNVFEGVLKERQEDGLVLDSPGLVHPLKVDADASVVDNV---PVHVALRPEKI-----M 330
Query: 301 RVEEPE----NIVRAKVDIVENLGGEKIVHLRL 329
EEP N +V + LG + H+RL
Sbjct: 331 LCEEPPANGCNFAVGEVIHIAYLGDLSVYHVRL 363
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 237 bits (598), Expect = 2e-61
Identities = 127/292 (43%), Positives = 189/292 (64%), Gaps = 18/292 (6%)
Query: 4 VKLINVWKKF-GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYI 62
++ + V K + G +V+ +S +I++GE + LLGPSG GKTT LR+IAGLE PT G ++I
Sbjct: 3 IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWI 62
Query: 63 DDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVRE 122
K V D +PP++R+V +VFQ+YAL+ HMTVYDN++F L+ ++VPK E+D RVRE
Sbjct: 63 GGKRVTD------LPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRE 116
Query: 123 VAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAEL 182
+ + L R P ELSGGQ+QRVAL RA+ RP+V L DEP + +D ++R ++R +
Sbjct: 117 LLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFV 176
Query: 183 KKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS 242
+++ ++GVT+++VTHDQ EA+ + DR+ V++ G ++Q GTP+EVY KP FVA FIG
Sbjct: 177 RQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGE 236
Query: 243 PPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDI 294
N T V +G ++ L + E G EV +RP+D+
Sbjct: 237 --SNVWTRAV-QNGRIEVAGAALPVDPAVSE--------GSEVAVVVRPKDV 277
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 237 bits (598), Expect = 2e-61
Identities = 143/303 (47%), Positives = 188/303 (61%), Gaps = 29/303 (9%)
Query: 4 VKLINVWKKFGDF----TAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
V + V K +GD A+K + L+I+D EF LLGPSGCGKTT LRMIAG E PT G+
Sbjct: 12 VSIRAVRKVYGDPESGPVALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGE 71
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLR----KVPKQE 115
I + + +A PP ER V VFQ YAL+PHM++ +N+AF L+ R + K E
Sbjct: 72 ILLYGENIAAR------PPFERPVNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAE 125
Query: 116 IDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLR 175
I RVRE+ ++ + R+P +LSGGQ+QRVAL RA+ +P+V L+DEPLS LD KLR
Sbjct: 126 IAERVREMLALVQMERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLR 185
Query: 176 VKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTF 235
MR ELK +Q + G+T I+VTHDQ EA+TM DRIAV++ G++QQVG P+E+Y +P N F
Sbjct: 186 QAMREELKAIQAKTGITFIFVTHDQEEALTMSDRIAVLSEGQVQQVGPPEEIYERPGNRF 245
Query: 236 VAGFIGSPPMNFLTA-TVSSDGFLDFGEFRLKLLK----DQFEVLEENNL-IGKEVIFGI 289
VA FIG NF+ A + DG L L + + FE + L G V I
Sbjct: 246 VADFIGE--TNFIEAELLQRDG-------PLALYRGPGGEAFEAAARDGLAAGARVCLSI 296
Query: 290 RPE 292
RPE
Sbjct: 297 RPE 299
>sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDCT
>gi|7445684|pir||D64896 probable ABC-type transport
protein b1441 - Escherichia coli
>gi|1742349|dbj|BAA15070.1| (D90783)
Spermidine/putrescine transport ATP-binding protein
PotA. [Escherichia coli] >gi|1742356|dbj|BAA15076.1|
(D90784) Spermidine/putrescine transport ATP-binding
protein PotA. [Escherichia coli]
>gi|1787712|gb|AAC74523.1| (AE000241) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 337
Score = 236 bits (596), Expect = 3e-61
Identities = 120/239 (50%), Positives = 167/239 (69%), Gaps = 6/239 (2%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+ NV + +GD AV +S+ IKDGEF +LGPSG GKTT LR+IAG E+ + G I I
Sbjct: 5 VEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIF 64
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
K ++ +PP ERDV VFQ YAL+PHM++ DN+A+ L ++ V K++ +E
Sbjct: 65 GKPASN------LPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEA 118
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
E + L + +RKP +LSGGQRQRVA+ RA++ P+V L+DEPL LD KLR +M+ ELK
Sbjct: 119 LEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELK 178
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS 242
KLQ+ LG+T I+VTHDQ EA++M DR+AV N G ++QV +P ++Y +P FVAGF+G+
Sbjct: 179 KLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGT 237
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 236 bits (595), Expect = 4e-61
Identities = 138/326 (42%), Positives = 197/326 (60%), Gaps = 21/326 (6%)
Query: 4 VKLINVWKKF-----GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
+ +++V+K + + +K++ L+I+ GEF LLGPSGCGKTT LR++AG E+ G
Sbjct: 1 MSVVDVFKSYRNAAGAETPVLKDIDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQADSG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
+ I + + +P R V VFQSYAL+PH++V DN+AF LK + V E+ +
Sbjct: 61 AVVIGGRDMTG------IPAHRRPVNTVFQSYALFPHLSVADNVAFGLKQKGVRGAELRQ 114
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
RV E + + + RKP +LSGGQRQRVAL RAI+ +P+V L+DEPLS LD KLR ++
Sbjct: 115 RVERAMETVQIGQFGNRKPDQLSGGQRQRVALARAIVNQPEVLLLDEPLSALDLKLRKQL 174
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
+ EL LQ LG+T ++VTHDQ EA+ M DRIAVMN+G ++Q+G +++Y +P FVA
Sbjct: 175 QVELSNLQEDLGITFVFVTHDQEEALVMSDRIAVMNQGRIEQLGRAEDLYERPRTAFVAN 234
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-IGKEVIFGIRPEDIYDA 297
F+GS N L V+ L E ++ L L +G+EV IRPE +
Sbjct: 235 FLGS--SNLLAGRVAE---LHGTEATVQTEFGPLRTLHGAGLSVGQEVTLSIRPEKL--- 286
Query: 298 SFIRVEEPE-NIVRAKVDIVENLGGE 322
R +E E N VRA+VD + G E
Sbjct: 287 RMERDDETEGNEVRARVDDIVYTGAE 312
>sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|72468|pir||GRYCS7
sulfate transport protein - Synechococcus sp. (strain
PCC 7942) >gi|142152|gb|AAA22056.1| (J04512) sulfate
permease (gtg start codon) [Synechococcus PCC6301]
Length = 344
Score = 234 bits (590), Expect = 2e-60
Identities = 139/362 (38%), Positives = 210/362 (57%), Gaps = 35/362 (9%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+++ V K+FG F AVK++ L ++ G + LLGPSG GK+T LR+IAGLE+P G+I++
Sbjct: 9 IQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIFLT 68
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ + ++R + VFQ YAL+ H+TV NIAF L+LRK K+++ RV E+
Sbjct: 69 GRDATNESV------RDRQIGFVFQHYALFKHLTVRKNIAFGLELRKHTKEKVRARVEEL 122
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
E++ LT L R P +LSGGQRQRVAL RA+ +P+V L+DEP LDAK+R +R+ L+
Sbjct: 123 LELVQLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLR 182
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
KL ++ VTT++VTHDQ EAM + D+I VMN G+++Q+G+P E+Y+ P FV FIG
Sbjct: 183 KLHDEVHVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEIYDNPATPFVMSFIG-- 240
Query: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVE 303
P+N +L + + + L +RP DI I ++
Sbjct: 241 PVN--------------------VLPNSSHIFQAGGLDTPHPEVFLRPHDIE----IAID 276
Query: 304 EPENIVRAKVDIVENLGGEKIVHLRLGD-IIFTAKFPQESV--VEEGQEAEVFFDMKKAH 360
V A++D + +LG E +RL D + A P++ ++ E +VF K+A
Sbjct: 277 PIPETVPARIDRIVHLGWEVQAEVRLEDGQVLVAHLPRDRYRDLQLEPEQQVFVRPKQAR 336
Query: 361 VF 362
F
Sbjct: 337 SF 338
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 234 bits (590), Expect = 2e-60
Identities = 119/254 (46%), Positives = 173/254 (67%), Gaps = 8/254 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ V + + K +G + +++ GEF+ LLGPSGCGK+T LR IAGL E G+I
Sbjct: 1 MSFVSVEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVDSGRI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
ID + V +PP++R +AMVFQSYAL+P+MTV N+AF L+++KVP E+ +RV
Sbjct: 61 LIDGEDVVP------LPPQKRGIAMVFQSYALFPNMTVQQNVAFGLRMQKVPAAELKQRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
E E++ L E R P +LSGGQ QRVAL R+++ RP++ L+DEPLS LDA++R +R
Sbjct: 115 AEAIELVELGEYAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLRE 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
+++++Q++LG+TT++VTHDQ EA+T+ DRI +MN G + Q G + +Y P N F AGFI
Sbjct: 175 QIRRIQQELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETLYTAPENAFAAGFI 234
Query: 241 GSPPMNFLTATVSS 254
G+ N L A +S
Sbjct: 235 GN--YNLLDAEQAS 246
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 233 bits (589), Expect = 2e-60
Identities = 145/361 (40%), Positives = 206/361 (56%), Gaps = 35/361 (9%)
Query: 8 NVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLV 67
NV K+FGDFTA+K+++LE+ DG+ + LLGPSG GK+T LR IAGLEEP GQI I+
Sbjct: 7 NVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIING--- 63
Query: 68 ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEML 127
+ V ++R++ VFQ YAL+ H+T+ NIAF L++RK P + RV E+ ++
Sbjct: 64 ---QDATHVDIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSLI 120
Query: 128 GLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQR 187
L L R P +LSGGQRQRVAL RA+ +P+V L+DEP LDAK+R ++RA L+KL
Sbjct: 121 QLEGLGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLHD 180
Query: 188 QLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNF 247
++ +T+++VTHDQ EAM + D I VM+ G+++QVGT +E+Y P + FV GFIG +N
Sbjct: 181 EVHLTSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEIYEHPASPFVMGFIGE--VNV 238
Query: 248 LTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPEN 307
L S + FE NN G + +RP D + E +
Sbjct: 239 LPRNASLFNY------------HAFEPHSSNN--GHQEPVFVRPHDFE----LLTEADDA 280
Query: 308 IVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQE------AEVFFDMKKAHV 361
V + V +LG E V + L D + E+GQ+ +VF + A V
Sbjct: 281 SVAGTIKRVIHLGSEIQVEVLLMDNTAVLAYLNR---EQGQQLNPKAGKKVFIKPRVAKV 337
Query: 362 F 362
F
Sbjct: 338 F 338
>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp. (strain PCC
6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
transporter [Synechocystis sp.]
Length = 368
Score = 233 bits (588), Expect = 3e-60
Identities = 127/278 (45%), Positives = 181/278 (64%), Gaps = 11/278 (3%)
Query: 19 VKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVPP 78
+++++ + GE L LLGPSGCGKTT LR+IAG E PT G ++++ V+ E G+ PP
Sbjct: 36 LQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGFETPTSGTVHLEGDCVSG-ENGL-TPP 93
Query: 79 KERDVAMVFQSYALYPHMTVYDNIAFPL--KLRKVPKQEIDRRVREVAEMLGLTELLKRK 136
++R MVFQ YAL+PH+T+ DNIAF L K +K+ +Q+I RV EV ++GLT L KR
Sbjct: 94 EQRQTGMVFQDYALFPHLTITDNIAFGLRHKSQKLNRQQIQGRVAEVLHLVGLTGLEKRY 153
Query: 137 PRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYV 196
P ELSGGQ+QR+AL RA+ +P + L+DEPLSNLD ++R ++R E++ + + G I+V
Sbjct: 154 PHELSGGQQQRIALARALAPKPNLILLDEPLSNLDVQVRQRLRHEIRHILKATGTAAIFV 213
Query: 197 THDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDG 256
THDQ EAM + DRI VM RG L+Q+GTP+E+Y P + FVA F+ NF+ A G
Sbjct: 214 THDQEEAMAISDRIGVMYRGNLEQIGTPEEIYRSPASRFVAEFV--TQANFVPA--QRQG 269
Query: 257 FL---DFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRP 291
L +FG++ L Q E+ L+ +E + P
Sbjct: 270 TLWATEFGQWPLTFQGIQPELPSVGELMLREEEIELSP 307
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 232 bits (586), Expect = 4e-60
Identities = 119/252 (47%), Positives = 177/252 (70%), Gaps = 6/252 (2%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
++L V K++G TAV++LSL +++GE L LLGPSGCGKTTTLRM+AGLE PT G I +D
Sbjct: 27 LELDGVTKEYGAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGLERPTGGTIELD 86
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
+ VA P+ FV ++R++ +VFQ +AL+PH++V +N+AF L R + RV E+
Sbjct: 87 AQRVAGPDT--FVAAEDREIGIVFQDFALFPHLSVAENVAFGLTDRD--EDATAARVDEM 142
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ + E+ R +LSGGQ+QRVA+ R++ P + L+DEP SNLD +LRV+MR E++
Sbjct: 143 LALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLRVEMREEVR 202
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
++ ++ GVT + VTHDQ EA+++ DR+AV+N G ++QVG P+ V+ P + FVA F+G
Sbjct: 203 RILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDPEGVFEHPESRFVASFLGQA 262
Query: 244 PMNFLTATVSSD 255
FL+A V SD
Sbjct: 263 A--FLSARVGSD 272
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 231 bits (582), Expect = 1e-59
Identities = 116/254 (45%), Positives = 165/254 (64%), Gaps = 6/254 (2%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V V ++FG TAV +SL+I GEF LLG SG GKTT L ++AG + P GQ+ +
Sbjct: 9 VSFQGVTRRFGPVTAVDNVSLDISQGEFFALLGSSGSGKTTLLTLLAGFDNPNEGQVLMS 68
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
V+D VPP +R + +VFQ+YAL+PH+T +N+A+PL++R V + E + RV+
Sbjct: 69 GVSVSD------VPPHKRQIGVVFQNYALFPHLTAAENVAYPLRMRGVARHEREERVKAA 122
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ L++ L P +LSGGQ+QRVAL RA++ P + LMDEPL LD +LR +M+ ELK
Sbjct: 123 LALVNLSDRLGAYPIQLSGGQQQRVALARALVFSPAILLMDEPLGALDRRLRDQMQQELK 182
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
++Q +LG+T IYVTHDQ EAM M DRI +M+ G L QV P+ +Y P + FVA FIG
Sbjct: 183 RIQHELGITVIYVTHDQSEAMAMADRIGIMSAGRLLQVADPEAIYAAPSSHFVARFIGEC 242
Query: 244 PMNFLTATVSSDGF 257
+ ++ T G+
Sbjct: 243 SILRVSGTNEGRGY 256
>dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 349
Score = 225 bits (568), Expect = 6e-58
Identities = 137/295 (46%), Positives = 178/295 (59%), Gaps = 16/295 (5%)
Query: 1 MAEVKLINVWKKFGDFT--AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
M+ ++L ++ K F AV + L I+ GE + LLGPSGCGKTTTLRMIAG E+PT G
Sbjct: 1 MSFIQLRDLTKTFSHTLKPAVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
I I ++V E VPP++R + MVFQ YAL+PH+T+ N+ F L K +
Sbjct: 61 SIKIGGEVVY--ENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMFGLS--KWGTRAKRE 116
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
R +EV E++GL + R P ELSGGQ+QRVAL RA+ +P V LMDEP SNLDA LR KM
Sbjct: 117 RAKEVLELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKM 176
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R E+ + R+ T I VTHDQ +A + DR+ VMN G +QQ+ TP E+Y P N FVA
Sbjct: 177 RFEVTTILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQ 236
Query: 239 FIGSPPMNFLTATVSSD-GFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
F+G N L+ + D +D R+ L Q EV+ EN V IRPE
Sbjct: 237 FVGK--TNLLSGRLCEDMRHVDTHIGRVS-LPAQSEVMLEN------VKVSIRPE 282
>dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans]
Length = 349
Score = 224 bits (565), Expect = 1e-57
Identities = 124/257 (48%), Positives = 162/257 (62%), Gaps = 8/257 (3%)
Query: 1 MAEVKLINVWKKFGDFT--AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
M+ ++L ++ K F AV + L I+ GE + LLGPSGCGKTTTLRMIAG E+PT G
Sbjct: 1 MSFIQLRDLTKTFSHTLKPAVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
I I ++V E VPP++R + MVFQ YAL+PH+T+ N+ F L K +
Sbjct: 61 SIKIGGEVVY--ENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMFGLS--KWGTRAKRE 116
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
R +EV E++GL + R P ELSGGQ+QRVAL RA+ +P V LMDEP SNLDA LR KM
Sbjct: 117 RAKEVLELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKM 176
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R E+ + R+ T I VTHDQ +A + DR+ VMN G +QQ+ TP E+Y P N FVA
Sbjct: 177 RFEVTTILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQ 236
Query: 239 FIGSPPMNFLTATVSSD 255
F+G N L+ + D
Sbjct: 237 FVGK--TNLLSGRLCED 251
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 222 bits (559), Expect = 6e-57
Identities = 118/303 (38%), Positives = 198/303 (64%), Gaps = 17/303 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA +K+ N K +GD ++++ K GEF+ LLGPSGCGK+T LR IAGL + G+I
Sbjct: 1 MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQINGGKI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
++DK + + P++R++ MVFQ+YAL+P++ V++N+AF LK++K+ K++I++RV
Sbjct: 61 SLNDKDLTK------LSPQKRNIGMVFQNYALFPNLNVFENVAFGLKIKKMDKKDIEKRV 114
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+++ +++ L E K P +LSGGQ QRVAL R+++ +P + L+DEPLS LDAK+R +R
Sbjct: 115 KKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRV 174
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
++K++Q++L +TTI+VTHDQ EA+ + D I +MN G++ Q + +Y P + FVA FI
Sbjct: 175 QIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNLYLLPESHFVASFI 234
Query: 241 GSPPMNFLT-ATVSSDGFLDFGEFRLKLLKDQFEV--------LEENNLIGKEVIFGIRP 291
G+ N L+ + S G + + L + E+ ++E +L+G + + +R
Sbjct: 235 GN--YNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKIKEKSLLGNIIRYRVRV 292
Query: 292 EDI 294
++I
Sbjct: 293 QEI 295
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 222 bits (559), Expect = 6e-57
Identities = 120/263 (45%), Positives = 168/263 (63%), Gaps = 13/263 (4%)
Query: 8 NVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLV 67
NV K FG F A+ +++L I+ GE + LLGPSG GKT+ LR+IAGLE G IY V
Sbjct: 7 NVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFHKDKV 66
Query: 68 ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLR----KVPKQEIDRRVREV 123
R V VFQ YAL+PHMTV DNI++ L+++ + K+EI +VRE+
Sbjct: 67 TQTHAA------SRQVGFVFQHYALFPHMTVADNISYGLRVKPRKERPSKKEIAEKVREL 120
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
++ L + R P +LSGGQRQR+AL RA+ PKV L+DEP LDAK+R +R L+
Sbjct: 121 LALVKLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRKWLR 180
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
KL + VT+++VTHDQ EA+ + DR+ VMN+G+++QVG+PDEVY +P + FV F+G+
Sbjct: 181 KLHNEFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEVYEQPKSPFVYDFLGN- 239
Query: 244 PMNFLTATVSSDGFLDFGEFRLK 266
+N T V GF+ + +LK
Sbjct: 240 -VNVFTGRV-KQGFVQLDKHQLK 260
>gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter; PotA2
[Halobacterium sp. NRC-1]
Length = 374
Score = 220 bits (554), Expect = 2e-56
Identities = 121/241 (50%), Positives = 158/241 (65%), Gaps = 7/241 (2%)
Query: 2 AEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIY 61
A V+L V K +GD TAV +L+L ++ E L+GPSGCGKTTTLR+I+G E PT G I
Sbjct: 23 ALVRLDGVRKTYGDTTAVADLTLTLRRNELFTLVGPSGCGKTTTLRLISGFESPTEGTIR 82
Query: 62 IDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPL-KLRKVPKQEIDRRV 120
I+ +P G VPP+ RD +VFQ +AL+ HM+V +N+ + L K V E+ RRV
Sbjct: 83 IN----GEPATG--VPPERRDTNLVFQQHALFSHMSVAENVGYGLEKDPDVGADEVARRV 136
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+++ LTE +R P LSGGQ+QRVAL RA++ P V L+DEPLS+LD LR +M+A
Sbjct: 137 ESALDLVNLTESGERSPGALSGGQQQRVALARALVNEPAVLLLDEPLSSLDRTLRKQMQA 196
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
EL++L + + YVTHDQ AM + DRI VM GEL QVGTP VY P + FVA FI
Sbjct: 197 ELRRLSDAVEGSFCYVTHDQELAMAVSDRIGVMRDGELVQVGTPAAVYRNPASPFVASFI 256
Query: 241 G 241
G
Sbjct: 257 G 257
>sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1469284|gb|AAB05030.1| (U05042) afuC gene product
[Actinobacillus pleuropneumoniae]
>gi|1477453|gb|AAB17216.1| (U04954) afuC [Actinobacillus
pleuropneumoniae]
Length = 348
Score = 219 bits (552), Expect = 4e-56
Identities = 118/289 (40%), Positives = 173/289 (59%), Gaps = 14/289 (4%)
Query: 6 LINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDK 65
L N+ K FG T + L L IK G + LLGPSGCGKTT LR++AGLE PT GQI+ID +
Sbjct: 8 LKNITKSFGKATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGE 67
Query: 66 LVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAE 125
V + RD+ +VFQSYAL+PHM++ DN+ + L+++ V +E +RV+E E
Sbjct: 68 DVTKSSI------QNRDICIVFQSYALFPHMSIGDNVGYGLRMQGVSNEERKQRVKEALE 121
Query: 126 MLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKL 185
++ L R ++SGGQ+QRVAL RA++ +PKV ++DEPLSNLDA LR MR ++++L
Sbjct: 122 LVDLAGFADRFVDQISGGQQQRVALARALVLKPKVLILDEPLSNLDANLRRSMREKIREL 181
Query: 186 QRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPM 245
Q++LG+T++YVTHDQ EA + D + VMN+G + Q F+ I
Sbjct: 182 QQRLGITSLYVTHDQTEAFAVSDEVIVMNKGTIMQKARQ--------KIFIYDRILYSLR 233
Query: 246 NFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDI 294
NF+ + DG L+ G + + + ++ + G+RPE I
Sbjct: 234 NFMGESTICDGNLNQGTVSIGDYRFPLHNAADFSVADGACLVGVRPEAI 282
>gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens]
Length = 337
Score = 218 bits (550), Expect = 7e-56
Identities = 123/267 (46%), Positives = 165/267 (61%), Gaps = 17/267 (6%)
Query: 34 LLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALY 93
+LGPSG GKT+ L MIAG E PT G+I I D+ V D + P +R++ MVFQ YAL+
Sbjct: 3 VLGPSGSGKTSVLTMIAGFERPTAGRIVIGDRDVTD------LAPNKRNIGMVFQKYALF 56
Query: 94 PHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRA 153
PH+TV NIAFPLKLR + +R ++ +++ L R P ELSGGQ+QRVA+ RA
Sbjct: 57 PHLTVRQNIAFPLKLRSRWRSGWRQRADDMLDLVHLAGFADRFPSELSGGQQQRVAVARA 116
Query: 154 IIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVM 213
+ P V LMDEPL LD KLR M+ E+K++QRQ+G T +YVTHDQ EA+TM DR+A+M
Sbjct: 117 LAFEPPVMLMDEPLGALDKKLREAMQFEIKRIQRQVGATVLYVTHDQEEALTMSDRVAIM 176
Query: 214 NRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQF- 272
G + Q+G P +Y+ P FVA F+G M+F+ + S F D G ++L D F
Sbjct: 177 QGGNIVQIGAPSSLYHAPATRFVADFVGK--MSFVGGEIVS--FEDDG-MLVRLADDVFV 231
Query: 273 -----EVLEENNLIGKEVIFGIRPEDI 294
+ +G EVI +RPE I
Sbjct: 232 RTASVDAARAALRLGDEVILAMRPERI 258
>pir||H72690 probable spermidine/putrescine transport ATP-binding protein
APE0944 - Aeropyrum pernix (strain K1)
>gi|5104613|dbj|BAA79928.1| (AP000060) 325aa long
hypothetical spermidine/putrescine transport ATP-binding
protein [Aeropyrum pernix]
Length = 325
Score = 211 bits (531), Expect = 1e-53
Identities = 120/291 (41%), Positives = 171/291 (58%), Gaps = 15/291 (5%)
Query: 18 AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVP 77
A++ +S + +LGPSGCGKTT L++IAGL +P G+++ +P
Sbjct: 3 ALRGVSFSFPESSITAVLGPSGCGKTTMLKVIAGLLKPRRGRVFFGGVDYTG------LP 56
Query: 78 PKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLT---ELLK 134
P+ R V VFQ AL+PHMTVYDN+AF L+ R E+ R+V E +GLT E +
Sbjct: 57 PERRSVGFVFQDLALFPHMTVYDNVAFGLRARGFSGGEVRRQVEWALETVGLTPPREFMG 116
Query: 135 RKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTI 194
R+ LSGGQ+QRVAL RAI P V L+DEPLS+LD K+R ++ AELK+LQR+LG T I
Sbjct: 117 RRVTGLSGGQQQRVALARAIAYEPPVLLLDEPLSHLDFKIRQRLLAELKRLQRKLGSTMI 176
Query: 195 YVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSS 254
YVTHDQ EAM + D + +M G + Q GTP EVY +P N +VA F G N + + +
Sbjct: 177 YVTHDQWEAMELADTLVIMRDGRIVQHGTPSEVYTRPANVYVATFFGD--ANIIPKELLT 234
Query: 255 DGFLDFGEFRLKLLKDQFEVLEENNLI--GKEVIFGIRPEDIYDASFIRVE 303
G GE+ + + + E++ + + G + + + ++ IRVE
Sbjct: 235 PG--SGGEWAIMVRPEDLEIVRNGSPVPQGWPRLEAVVEDLVFQGPLIRVE 283
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 211 bits (531), Expect = 1e-53
Identities = 138/374 (36%), Positives = 206/374 (54%), Gaps = 40/374 (10%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
+ + N+ K FG+F A+K ++L + G+ + LLGPSGCGKTT LR+IAGLE G+I D
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGKILFD 62
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPL----KLRKVPKQEIDRR 119
+ V +ER V VFQ YAL+ HM V+DN+AF L K + K +I +
Sbjct: 63 GQDVTAKHV------RERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQIRAK 116
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
V E+ +++ L+ L K P +LSGGQRQR+AL RA+ PK+ L+DEP LDAK+R ++R
Sbjct: 117 VEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELR 176
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
L+ + LGVT+I VTHDQ EA+ + D I VMN G+++Q G+ + +Y KP N FV F
Sbjct: 177 TWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEF 236
Query: 240 IGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF 299
+G + + GF + F KL D +E G IRP +
Sbjct: 237 LGE--TDAFEGRIEK-GFWHYNGFAWKL--DAQYKWQEQTATGY-----IRPHEWQ---- 282
Query: 300 IRVEEPENIVRAKVDIVENLG---------GEKIVHLRLGDIIFTAKFPQESVVEEGQEA 350
I E ++ A+++ V +G G++ VH+ L A++P + EG+E
Sbjct: 283 IAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAG-SDAARYP----IAEGKEL 337
Query: 351 EVFFDMKKAHVFNK 364
+ K+ +VF++
Sbjct: 338 NLI--PKQVYVFSQ 349
>gb|AAC12799.1| (U67851) ChtG [Agrobacterium sp.] >gi|3153868|gb|AAC17431.1|
(AF065242) putative ABC type transporter ChtG
[Agrobacterium tumefaciens]
Length = 324
Score = 208 bits (523), Expect = 1e-52
Identities = 120/301 (39%), Positives = 173/301 (56%), Gaps = 22/301 (7%)
Query: 34 LLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALY 93
LLG SG GKTT L ++AG ++P+ G++ + V + VPP R + +VFQ+YAL+
Sbjct: 3 LLGSSGSGKTTLLMLLAGFDQPSEGKVLMSGTSVTE------VPPHRRSIGVVFQNYALF 56
Query: 94 PHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRA 153
PHMT +N+A+PLK+R V + E D RV+ ++ LT+ P ++SGGQ+QRVAL R+
Sbjct: 57 PHMTAAENVAYPLKMRGVGRSERDERVKAALSLVNLTDRGASYPIQMSGGQQQRVALARS 116
Query: 154 IIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVM 213
++ P + LMDEPL LD +LR +M+ ELK++Q +LG+T IYVTHDQ EAM M DRI +M
Sbjct: 117 LVFGPDILLMDEPLGALDRRLRDQMQHELKRIQHELGITVIYVTHDQSEAMAMADRIGIM 176
Query: 214 NRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRL--KLLKDQ 271
+ GEL QV P+ +Y P N FVA FIG + +T G+ G +L K
Sbjct: 177 SGGELLQVADPETIYAAPSNHFVARFIGDCSILRVTNLDEGRGYEIAGGRQLLPSPAKTP 236
Query: 272 FEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPENI-VRAKVDIVENLGGEKIVHLRLG 330
F+++ +RPE + S E V A + + LG V L++
Sbjct: 237 FDIV-------------VRPESVSIRSVAEANSDEGFAVPATIRDITYLGSGWRVALQIS 283
Query: 331 D 331
D
Sbjct: 284 D 284
>pir||C69223 anion permease - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2622017|gb|AAB85418.1| (AE000867) anion
permease [Methanobacterium thermoautotrophicum]
Length = 357
Score = 201 bits (506), Expect = 1e-50
Identities = 124/371 (33%), Positives = 202/371 (54%), Gaps = 20/371 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ + + N+ G+F V+ L + G++LV++GP+G GK+ L I G EP G I
Sbjct: 1 MSFLDIDNLEIDLGEFV-VRVDELHLSRGDYLVIIGPTGSGKSIFLETIMGFFEPISGTI 59
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+D + +PP+ERDV++V+Q + L+PHMTV +NIA+ L+ + K+ I R+V
Sbjct: 60 SLDGADLTT------LPPEERDVSIVYQDHCLFPHMTVEENIAYGLRKQTEMKENIHRQV 113
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
E+A M+G+ +L R P LSGG+ QR ++ RAII P++ LMDEP S LD + ++ +R
Sbjct: 114 HEIAAMMGIDHVLNRYPGTLSGGELQRASIARAIIVNPRLLLMDEPFSALDQRTKISLRK 173
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
+ ++ T I+VTHD + + +++AVMN G++ Q+G +EV NKP FVA F+
Sbjct: 174 LIADIRDNFETTVIHVTHDLDDIWWLSNKVAVMNHGKIIQMGKKEEVINKPSPYFVADFL 233
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
G+ N L TV G + + + F ++ VI IRPE+I A+
Sbjct: 234 GA---NILEGTVKGQ---VNGLTSVNVNSNIFRTVDCGE---GSVILSIRPENIMIAADP 284
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVE----EGQEAEVFFDM 356
+ +NI + V+ + V+LR+GDI+ T+ +V E G+E +V
Sbjct: 285 FMASAQNIFKGTVEDIIETSRIVYVNLRIGDIVLTSAVTPGAVTELGIRTGEEFQVLIKA 344
Query: 357 KKAHVFNKTNE 367
+ + N+
Sbjct: 345 TNVRIIGEKNK 355
>gb|AAA92009.1| (U37409) ABC multiple sugar transport protein [Lactococcus lactis]
Length = 189
Score = 200 bits (504), Expect = 2e-50
Identities = 102/179 (56%), Positives = 127/179 (69%), Gaps = 10/179 (5%)
Query: 126 MLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKL 185
+LGLT+LL RKP +LSGGQRQRVA+GRAI+R KVFLMDEPLSNLDAKLRV MR E+ K+
Sbjct: 2 ILGLTDLLDRKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRTEIAKI 61
Query: 186 QRQLGVTTIYVTHDQVEAMTMGDRIAVMNR----------GELQQVGTPDEVYNKPLNTF 235
R++G TTIYVTHDQ EAMT+ DRI +M+ G ++Q+GTP +YN+P N F
Sbjct: 62 HRRIGATTIYVTHDQTEAMTLADRIVIMSSSPNSDKTGTVGRVEQIGTPQGLYNEPANKF 121
Query: 236 VAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDI 294
VAGFIGSP MNF V+ + + L + + ++L+E GKEVI GIRPEDI
Sbjct: 122 VAGFIGSPAMNFFNVKVTGGKLTNNEGLNMDLPEGKAKLLKEQGYEGKEVILGIRPEDI 180
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 198 bits (499), Expect = 7e-50
Identities = 105/243 (43%), Positives = 156/243 (63%), Gaps = 11/243 (4%)
Query: 3 EVKLINVWKKF----GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
+VKL + K + G F AV + LEI GE + LLGPSG GKTT LR++AGLEE T G
Sbjct: 7 DVKLQGIVKHYKTRKGIFKAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEEITEG 66
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
+I+ D + D ++R + VFQ YAL+ H+TV DNIAF +++K+ +I +
Sbjct: 67 KIFYDGEDATDWSL------EDRQIGFVFQGYALFKHLTVGDNIAFGPRMKKMDI-DIRK 119
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
RV+E+ +++ L L R P++LSGGQRQR+AL RA+ P++ L+DEP LD ++R +
Sbjct: 120 RVKELLDLVQLPGLESRFPQQLSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDL 179
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
R LK++ L +T++ VTHDQ EA + DR+ V N+G ++QVG+ +++Y P FV
Sbjct: 180 RNSLKRIISSLNLTSVMVTHDQEEAFEVADRVVVFNKGSIEQVGSLEDIYRNPQTAFVMD 239
Query: 239 FIG 241
F+G
Sbjct: 240 FVG 242
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 195 bits (490), Expect = 8e-49
Identities = 116/286 (40%), Positives = 168/286 (58%), Gaps = 5/286 (1%)
Query: 3 EVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYI 62
+V L NV K++G+F AV+EL+L ++ GE L L+GPSG GKTTTLRMI L EP G++ I
Sbjct: 8 DVVLENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLI 67
Query: 63 DDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVRE 122
+ + +++ I R++ V Q L+PHM V++NI KL +++I +RV E
Sbjct: 68 NGQDISE----IDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDE 123
Query: 123 VAEMLGLT-ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAE 181
+ +++ L E +R P +LSGGQ+QRV L RA+ P + LMDEP LD LR +++ E
Sbjct: 124 LLKLVDLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEE 183
Query: 182 LKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIG 241
+++ +LG T ++VTHD EA +GDRIA+MN G L QVG P+E+ P N FV G
Sbjct: 184 FARIKEELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPANEFVEDITG 243
Query: 242 SPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIF 287
+ T+ F+ E L + E L+E G EV F
Sbjct: 244 ARRKFRHLDTLKVKDFMISAEKYLIQNMEVAEALKEFRKRGVEVGF 289
>pir||F81929 probable iron-uptake permease ATP-binding protein NMA0842
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379558|emb|CAB84123.1| (AL162754) putative
iron-uptake permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 352
Score = 187 bits (471), Expect = 1e-46
Identities = 117/345 (33%), Positives = 178/345 (50%), Gaps = 15/345 (4%)
Query: 11 KKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADP 70
K F + + ++SL + GE L ++G SGCGKTT LR +AG E+P G+I + + +
Sbjct: 12 KSFQNTPVLNDISLSLDPGEILFIVGASGCGKTTLLRCLAGFEQPDFGEISLSGRTIFS- 70
Query: 71 EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLT 130
K +P +ER + V Q L+PH+TVY N A+ L K + +R+ + E+ G++
Sbjct: 71 -KNTNLPVRERRLGYVVQEGVLFPHLTVYRNTAYGLGNGKGKTAQERQRIEAMLELTGIS 129
Query: 131 ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLG 190
EL R P ELSGGQ+QRVAL RA+ P++ L+DEP S LD +LR ++R ++ R G
Sbjct: 130 ELAGRYPHELSGGQQQRVALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANG 189
Query: 191 VTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTA 250
+ ++V+HD+ EA+ DRIAVM +G + Q +P E+Y +P + A FIG + A
Sbjct: 190 KSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAALFIGEGIV--FPA 247
Query: 251 TVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPENIVR 310
+++DG D G RL ++ G IRPE S P +
Sbjct: 248 ALNADGTADCGLGRLP--------VQSGAPAGTRGTLLIRPEQF---SLHPHSAPTASIH 296
Query: 311 AKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
A V + LR+G + T P + +G A + D
Sbjct: 297 AVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGISAVLHLD 341
>sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187 HOMOLOG
(E07_ORF586) >gi|2146652|pir||S73346
sn-glycerol-3-phosphate transport system permease ugpC -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673667|gb|AAB95668.1| (AE000003)
sn-glycerol-3-phosphate transport system permease
protein [Mycoplasma pneumoniae]
Length = 586
Score = 175 bits (440), Expect = 6e-43
Identities = 100/221 (45%), Positives = 146/221 (65%), Gaps = 10/221 (4%)
Query: 113 KQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDA 172
K I+R +EVAE L +T++L ++P +SGGQ+QRVA+ RAI+RRPKV LMDEPLSNLDA
Sbjct: 337 KDFINRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMDEPLSNLDA 396
Query: 173 KLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPL 232
KLRV+ R ++K Q+ L +TT++VTHDQ EAM++ D I M+ G++QQ+G+P E+Y KP
Sbjct: 397 KLRVQTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSPSELYLKPA 456
Query: 233 NTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
N FVA F+GSP MN + ATV + G L + E L+K +F++ + +G P+
Sbjct: 457 NEFVATFLGSPEMNIVNATVKA-GQLLWNE--NPLVKTKFDLPDGAIRVGFRYDEVTAPK 513
Query: 293 D----IYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRL 329
+ ++ + I V EN+ + V +VE+ G + V L L
Sbjct: 514 NDGSPVFSGTLISV---ENLGKHMVGVVESNGVQLNVRLEL 551
Score = 97.5 bits (239), Expect = 2e-19
Identities = 47/103 (45%), Positives = 68/103 (65%), Gaps = 6/103 (5%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
++ N+ FG+ A+ ++L +K E + LLGPSGCGKTT+L +IAGL PT GQ+ +
Sbjct: 13 IEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFN 72
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPL 106
V PP++R + +VFQ+YALYPHM+V++NI FPL
Sbjct: 73 GYDVTKK------PPQQRKLGLVFQNYALYPHMSVFENIVFPL 109
>sp|P47433|Y187_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187
>gi|1361456|pir||G64220 ATP-binding protein msmK homolog
- Mycoplasma genitalium >gi|3844784|gb|AAC71406.1|
(U39698) ABC transporter, ATP-binding protein
[Mycoplasma genitalium]
Length = 585
Score = 175 bits (438), Expect = 1e-42
Identities = 96/258 (37%), Positives = 152/258 (58%), Gaps = 15/258 (5%)
Query: 113 KQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDA 172
KQ I++ EVA L +T++L ++P ++SGGQ+QRVA+ RAI+RRPK+ LMDEPLSNLDA
Sbjct: 341 KQFINKTALEVANKLAITKILTKRPDKISGGQQQRVAIARAIVRRPKLLLMDEPLSNLDA 400
Query: 173 KLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPL 232
KLRV+ R +++ Q++L +TT++VTHDQ EAM++ D I M+ G++QQ+GTP E+Y KP
Sbjct: 401 KLRVQTRQWIRQFQQELQITTVFVTHDQEEAMSISDVIVCMSTGKVQQIGTPSELYLKPA 460
Query: 233 NTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
N FVA F+G+P MN + +V ++ + V E L ++++ G R E
Sbjct: 461 NEFVARFLGTPEMNIIECSVKNNQL---------FWNNHLLVTESFKLNVEKLLVGFRYE 511
Query: 293 DIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEV 352
+ V ++ ++AK+ +ENLG + + L D + + S ++ G
Sbjct: 512 QLV------VTTNKSSLQAKLINIENLGKHLVATISLFDTTLSMRLELNSHLKVGDSLNF 565
Query: 353 FFDMKKAHVFNKTNERAI 370
H F+ ++ I
Sbjct: 566 IIKANNLHFFDIDTKQRI 583
Score = 99.5 bits (244), Expect = 6e-20
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
++L N+ FG+ A+ ++L ++ + + LLGPSGCGKTTTL +IAGL +PT GQ+ +
Sbjct: 8 IELKNIVVDFGESVAIDNINLSVEKHQLVSLLGPSGCGKTTTLAVIAGLIKPTSGQVLFN 67
Query: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPL 106
V PP+ER + +VFQ+YALYPHM V++NI FPL
Sbjct: 68 GYDVTKK------PPQERKLGLVFQNYALYPHMNVFENIVFPL 104
>gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874|prf||2209379C
fbpC gene [Neisseria gonorrhoeae]
Length = 352
Score = 172 bits (432), Expect = 5e-42
Identities = 113/345 (32%), Positives = 171/345 (48%), Gaps = 15/345 (4%)
Query: 11 KKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADP 70
K F + + ++SL + GE L ++G SGCGKTT LR +AG E+P G+I + K +
Sbjct: 12 KSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFS- 70
Query: 71 EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLT 130
K +P +E + PH+TVY NIA+ L K + +R+ + E+ G++
Sbjct: 71 -KNTNLPVRETTFGLPRTGRCSVPHLTVYRNIAYGLGNGKGRTAQERQRIEAMLELTGIS 129
Query: 131 ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLG 190
EL R P ELSGGQ+QRVAL RA+ P++ L+DEP S LD +LR ++R ++ R G
Sbjct: 130 ELAGRYPHELSGGQQQRVALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANG 189
Query: 191 VTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTA 250
+ ++V+HD+ EA+ DRIAVM +G + Q +P E+Y +P + FIG + A
Sbjct: 190 KSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAVLFIGEGIV--FPA 247
Query: 251 TVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPENIVR 310
+++DG D RL ++ G IRPE S P +
Sbjct: 248 ALNADGTADCRLGRLP--------VQSGAPAGTRGTLLIRPEQF---SLHPHSAPVVSIH 296
Query: 311 AKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFD 355
A V + LR G + T P + +G A + D
Sbjct: 297 AVVLKTTPKARYTEISLRAGQTVLTLNLPSAPTLSDGISAVLHLD 341
>sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFUC >gi|72462|pir||QRSEUC
nucleotide-binding protein sfuC - Serratia marcescens
>gi|152862|gb|AAA26575.1| (M33815) iron transport
protein (sufC) [Serratia marcescens]
Length = 345
Score = 171 bits (429), Expect = 1e-41
Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 6/242 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ ++L + K + ++ + L++ G ++GPSG GKTT LR+IAG E P GQI
Sbjct: 1 MSTLELHGIGKSYNAIRVLEHIDLQVAAGSRTAIVGPSGSGKTTLLRIIAGFEIPDGGQI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ + + + +VP R + V Q AL+PH TV NI F LK K KQ RR+
Sbjct: 61 LLQGQAMGNGSG--WVPAHLRGIGFVPQDGALFPHFTVAGNIGFGLKGGKREKQ---RRI 115
Query: 121 REVAEMLGLTELLKRK-PRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ EM+ L L P ELSGGQ+QRVAL RA+ ++P++ L+DEP S LD LR R
Sbjct: 116 EALMEMVALDRRLAALWPHELSGGQQQRVALARALSQQPRLMLLDEPFSALDTGLRAATR 175
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+ +L + V +I VTHDQ EA++ D++AVM G L QVG P ++Y +P++ A F
Sbjct: 176 KAVAELLTEAKVASILVTHDQSEALSFADQVAVMRSGRLAQVGAPQDLYLRPVDEPTASF 235
Query: 240 IG 241
+G
Sbjct: 236 LG 237
>pir||T43920 YfuC protein [imported] - Yersinia enterocolitica
>gi|619575|emb|CAA87396.1| (Z47200) YfuC protein
[Yersinia enterocolitica]
Length = 349
Score = 166 bits (415), Expect = 5e-40
Identities = 93/242 (38%), Positives = 140/242 (57%), Gaps = 6/242 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ + + K + ++ + L++ G ++GPSG GKTT LR+IAG E P G++
Sbjct: 1 MSTLDFNKIGKSYQSVRVLEGIDLQVTAGSRTAIVGPSGSGKTTLLRIIAGFETPDSGKV 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ + D + VP +R + V Q AL+PH T NIA+ LK KQ+ RR+
Sbjct: 61 ILQGNPLFD--QSTHVPAHKRGIGFVPQDGALFPHFTAAGNIAYGLK---GSKQDKARRI 115
Query: 121 REVAEMLGLTELLKRK-PRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
++ EM+ L L + P E+SGGQ+QRVAL RA+ +RP + L+ EP S LD LR R
Sbjct: 116 DKLMEMVALDRRLAQLWPHEISGGQQQRVALARALGQRPALMLLVEPFSTLDTALRASTR 175
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+ +L Q + +I VTHDQ EA++ D++AVM G+L VG P E+Y +P++ A F
Sbjct: 176 KAVAELLSQANIASILVTHDQSEALSFADQVAVMRAGKLVHVGAPQELYLRPIDEPTATF 235
Query: 240 IG 241
+G
Sbjct: 236 LG 237
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 162 bits (405), Expect = 7e-39
Identities = 83/232 (35%), Positives = 147/232 (62%), Gaps = 4/232 (1%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
MA++++I++ K+FG+ +K ++++++ GE +V++GPSG GK+T LR I LEEPT G+I
Sbjct: 1 MAQLEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRR 119
+D + + + I + + + +VFQ + L+PH+T N+ P+K++K+ K+E +
Sbjct: 61 LLDGVDITNSK--IDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEEL 118
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ E +GL + P +LSGGQ+QRVA+ RA+ P+V L DE S LD +L ++
Sbjct: 119 GMRLLEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVL 178
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+K+L R G+T + VTH+ A +GDR+ M+ G + + G P+++++ P
Sbjct: 179 DVMKQLARD-GMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSNP 229
>pir||B70118 glycine betaine, L-proline ABC transporter, ATP-binding protein
(proV) homolog - Lyme disease spirochete
>gi|2688022|gb|AAC66523.1| (AE001125) glycine betaine,
L-proline ABC transporter, ATP-binding protein (proV)
[Borrelia burgdorferi]
Length = 372
Score = 160 bits (401), Expect = 2e-38
Identities = 100/322 (31%), Positives = 175/322 (54%), Gaps = 22/322 (6%)
Query: 7 INVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKL 66
+ ++K+ F A ++L++ + E LV++G SGCGK+T +R + G+ + G I +++
Sbjct: 38 MQIYKESSIFIANANINLDVYENEILVIMGMSGCGKSTLVRCLNGIYKIDSGSILVNNME 97
Query: 67 VADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEM 126
+ + ++ AMVFQ++ L+PHM V N+ + L+++ +P++ + R EV +
Sbjct: 98 MNAINRKDLSNLRKDKFAMVFQNFGLFPHMNVLRNVTYGLEVKHIPRKIREERAIEVLNL 157
Query: 127 LGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQ 186
+GL + + ELSGG +QRV + RA++ P + LMDE S LD ++ +M+ EL +L
Sbjct: 158 VGLEDSKYKYINELSGGMKQRVGIARALVVNPDILLMDEAFSALDPLIKGEMQEELLRLV 217
Query: 187 RQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS-PPM 245
+L T +++THD EA +G RIA M G++ QVG P E+ P F++ FI + P +
Sbjct: 218 AKLKKTVVFITHDLNEAFKLGHRIAFMRDGKIIQVGKPLEILANPSTDFISDFIKNLPVL 277
Query: 246 NFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPED--IYDASFIRVE 303
N L +LKD F+ L G VI + E+ +YD + +
Sbjct: 278 NILKIK--------------DILKDDFD-LNSGGDNGLNVIIKCQGENFSLYDKALNK-- 320
Query: 304 EPENIVRAKVDIVENLGGEKIV 325
+N+V +D+ + + +KIV
Sbjct: 321 RYDNLVSLNLDLNDEI--KKIV 340
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 157 bits (393), Expect = 2e-37
Identities = 85/241 (35%), Positives = 142/241 (58%), Gaps = 6/241 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M +K+ ++ K FG ++ + LE+K GE + ++GPSG GK+T LR I LEE G+I
Sbjct: 1 MTVLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRR 119
Y +L+ + + MVFQ + L+PH++V +N+ P+K++ + K E +
Sbjct: 61 YFKGELITHRN----INRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEK 116
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+++ E +GL E + KP LSGGQ+QRVA+ RA++ P++ L DEP S LD +L VK
Sbjct: 117 AKKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPEL-VKEV 175
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
++ K Q G+T + VTH+ A + DR+ M+ G + ++G P+++++ P N F
Sbjct: 176 LDVIKDLAQSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKIFSNPENERTREF 235
Query: 240 I 240
+
Sbjct: 236 L 236
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 155 bits (389), Expect = 6e-37
Identities = 116/369 (31%), Positives = 195/369 (52%), Gaps = 32/369 (8%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++L + K +GD +++++L++++GE L ++GP+G GK+T LR++ LE P G+I
Sbjct: 2 MHVIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEI 61
Query: 61 YIDDKLVADPEKGIFVPPKE--RDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR 118
+ V D + P E R + MVFQ+ ++ TV ++I + ++R E +
Sbjct: 62 LFMGENVDD------LKPLEVRRRMGMVFQNTPVF-RGTVAESILYGPRIRGERPHESE- 113
Query: 119 RVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKM 178
V++V E +GL R+ ELSGG+RQR+AL + +I RP+V L+DE S+LD R +M
Sbjct: 114 -VKDVLETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSRM 172
Query: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG 238
+ + +L VT I+ THD ++ + DRIA++NR L Q G P E++ KP + FVA
Sbjct: 173 ----EDVIAELDVTVIFTTHDLLQGQKLADRIAILNRSIL-QTGEPREIFKKPASRFVAE 227
Query: 239 FIGSPPMNFLTATVSSDGFLDFGEFRLKLLK-DQFEVLEENNLIGKEVIFGIRPEDIYDA 297
F+G+ M A ++++G + L++ D + G +V IRPEDI
Sbjct: 228 FVGARNMLRGRAHITAEG--------ISLIECDGISIYSSERATG-DVSATIRPEDI-TV 277
Query: 298 SFIRVEEPE-NIVRAKVDIVENLGGEKIVHLRLG----DIIFTAKFPQESVVEEGQEAEV 352
S+ R + N + +V V + G + + +R G + T K + + G +
Sbjct: 278 SWQRTDSSALNQLEGRVLAVRDAGSVQQLEVRCGGETLTVHMTGKSLNDMGITTGSRVWI 337
Query: 353 FFDMKKAHV 361
F HV
Sbjct: 338 EFKASAVHV 346
>emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coelicolor]
Length = 253
Score = 155 bits (389), Expect = 6e-37
Identities = 91/248 (36%), Positives = 138/248 (54%), Gaps = 10/248 (4%)
Query: 2 AEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIY 61
A VK V K FG +K + LE+K GE L+GPSG GK+T LR I LE+ G++Y
Sbjct: 3 AMVKAEGVHKSFGAVEVLKGIDLEVKQGEVFCLIGPSGSGKSTFLRCINHLEKINAGRLY 62
Query: 62 IDDKLVADPEKG--------IFVPPKERDVAMVFQSYALYPHMTVYDNI-AFPLKLRKVP 112
+D +LV +KG V K RD+ MVFQ + L+PHMT +N+ P++++ +
Sbjct: 63 VDGELVGYRQKGDKLYELKDSEVALKRRDIGMVFQRFNLFPHMTAVENVMEAPVQVKGMS 122
Query: 113 KQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDA 172
+ + R R + E +GL + P +LSGGQ+QRVA+ RA+ PK+ L DEP S LD
Sbjct: 123 RAQARERARGLLERVGLADKAGNYPSQLSGGQQQRVAIARALAMDPKLMLFDEPTSALDP 182
Query: 173 KLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPL 232
+L + ++ L + G+T + VTH+ A +GD + M+ G + + G P +V P
Sbjct: 183 ELVGDVLDVMRDL-AESGMTMVVVTHEMGFAREVGDSLVFMDNGVVVESGNPRDVLTDPQ 241
Query: 233 NTFVAGFI 240
+ F+
Sbjct: 242 HDRTKAFL 249
>emb|CAB90903.1| (AL355753) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 270
Score = 155 bits (388), Expect = 7e-37
Identities = 86/218 (39%), Positives = 128/218 (58%), Gaps = 17/218 (7%)
Query: 2 AEVKLINVWKKFG----DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTI 57
A++ + +V K F FTA+ ++SL+I + EF+ ++GPSGCGK+T + ++AGLE PT
Sbjct: 6 AKISVQHVTKTFSLGRETFTALDDVSLDIANHEFVTVVGPSGCGKSTLMNILAGLEAPTS 65
Query: 58 GQIYIDDKLVADP--EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQE 115
G+ +D V+ P E+G+ +FQ YAL+P +TV N+ F L+ VPK+E
Sbjct: 66 GRALVDGAPVSGPGPERGV-----------IFQQYALFPWLTVRQNVEFGLRTTGVPKRE 114
Query: 116 IDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLR 175
R E++GL P+ LSGG RQR A+ RA P + LMDEP LDA R
Sbjct: 115 RRARAEHFIELVGLERFADALPKTLSGGMRQRCAIARAYAVDPSILLMDEPFGALDALTR 174
Query: 176 VKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVM 213
VK++ +L K Q T +++THD EA+ + +R+ VM
Sbjct: 175 VKLQEQLLKTWSQDRRTVLFITHDVDEAVFLANRVVVM 212
>pir||D81435 probable iron-uptake ABC transport system ATP-binding protein
Cj0173c [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967666|emb|CAB72656.1| (AL139074) putative
iron-uptake ABC transport system ATP-binding protein
[Campylobacter jejuni]
Length = 302
Score = 154 bits (386), Expect = 1e-36
Identities = 91/231 (39%), Positives = 137/231 (58%), Gaps = 22/231 (9%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M E+K N+ K FG A++ ++L +K+GEFL +LG SG GK+T LR+IA LE+ + +
Sbjct: 2 MLEIK--NLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTLLRIIAKLEQASSYDL 59
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ KG +VA++FQ+YAL+PH+ V NI F L K++ ++ +
Sbjct: 60 FSC--------KG--------EVALMFQNYALFPHLNVEKNILFAL----YDKKDKNQIL 99
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ + + +L +K E+SGGQ QRVA RA+ R K+ L+DEP SNLD L+ +R
Sbjct: 100 NHLLKTFEIEDLRYKKIDEISGGQAQRVAFARAMARGCKLLLLDEPFSNLDQNLKQDLRR 159
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
ELKK+ G+T I VTHD +A M D+IA + +G++ P E+Y KP
Sbjct: 160 ELKKMIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKP 210
>pir||H81391 amino-acid ABC transporter ATP-binding protein Cj0469 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967940|emb|CAB75107.1| (AL139075) amino-acid ABC
transporter ATP-binding protein [Campylobacter jejuni]
Length = 253
Score = 154 bits (386), Expect = 1e-36
Identities = 86/232 (37%), Positives = 140/232 (60%), Gaps = 4/232 (1%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+ +K+ N+ K +G A+K+++LE+K E +V+LGPSGCGK+T LR I GLEE G I
Sbjct: 1 MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKSTLLRCINGLEEIASGNI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRR 119
YID++ + K P + V MVFQSY L+ H++V +NI P+K++K K E+ +
Sbjct: 61 YIDNEKIDKDFKE--WPRMRQKVGMVFQSYELFEHLSVEENILLGPMKVQKRKKDEVLKE 118
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ E +GL + PRELSGGQ+QR+A+ R++ P++ L DE + LD ++ ++
Sbjct: 119 AKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPEIVREVL 178
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+ L ++ G+T + VTH+ A + D+I M+ G++ + P + P
Sbjct: 179 EVMLNLAKE-GMTMLIVTHEMGFAKAVADKIIFMDEGKIIEENDPKSFFKNP 229
>sp|P45769|YHDZ_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YHDZ
>gi|7442515|pir||A65120 ABC-type transport protein yhdZ
- Escherichia coli >gi|606212|gb|AAA58075.1| (U18997)
ORF_o252 [Escherichia coli] >gi|1789672|gb|AAC76303.1|
(AE000406) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 252
Score = 153 bits (383), Expect = 3e-36
Identities = 89/240 (37%), Positives = 139/240 (57%), Gaps = 4/240 (1%)
Query: 2 AEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIY 61
A + L NV K +G F +K ++L ++ GE +VL GPSG GK+TT+R I LEE G+I
Sbjct: 11 AMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIV 70
Query: 62 IDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRRV 120
+D + + + I ++V MVFQ + L+PH+TV N P+ +RK+PK+E +
Sbjct: 71 VDGIELNEDIRNI--ERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLA 128
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
E + + E + P ++SGGQ+QRVA+ R++ +PK+ L DEP S LD ++ VK
Sbjct: 129 VHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEM-VKEVL 187
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
+ Q G+T + VTH+ A T+ DR+ M+RGE+ + PDE + P + F+
Sbjct: 188 DTMIGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKSERTRAFL 247
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 152 bits (381), Expect = 5e-36
Identities = 76/203 (37%), Positives = 123/203 (60%), Gaps = 4/203 (1%)
Query: 1 MAEVKLINVWK----KFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
M ++L++V+K + + A+ +S+E++ GEF+ ++GPSG GK+T L MI L++PT
Sbjct: 1 MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLNMIGCLDKPT 60
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G++ I+ + + + +FQ Y L P +T +N+ P+ R V + E
Sbjct: 61 KGEVIINGVKTSGLSDRELTKLRRDSIGFIFQQYNLIPTLTALENVELPMIFRGVARAER 120
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
+RR +E+ +++G+ EL R+PRE+SGGQ+QRVA+ RA+ PK+ L DEP NLD K
Sbjct: 121 ERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSGR 180
Query: 177 KMRAELKKLQRQLGVTTIYVTHD 199
++ LK L + GVT + VTHD
Sbjct: 181 QVMGILKNLNEENGVTVVLVTHD 203
>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445942|pir||B69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 228
Score = 151 bits (378), Expect = 1e-35
Identities = 79/225 (35%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Query: 1 MAEVKLINVWK----KFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
M V+L NV+K ++ + A+ +S+++++GEF+V++GPSG GK+T L +I L++PT
Sbjct: 1 MKVVELRNVYKIYRTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKSTLLNLIGCLDKPT 60
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G++ I+ + + + +FQ+Y L P +T +N+ P+ + V ++E
Sbjct: 61 EGEVLINGVETSSLNDNRLTELRRDTIGFIFQTYNLIPTLTALENVELPMIFKGVGRRER 120
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
+ R +E+ + +GL + + RKP E+SGGQ+QRVA+ RA+ PK+ L DEP NLD K
Sbjct: 121 EERAKELLKNVGLEKEMNRKPNEMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSGE 180
Query: 177 KMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQV 221
++ ++ LGVT I VTHD A GDR+ + G+++ V
Sbjct: 181 QVMEIIRHQNEVLGVTVILVTHDPSLA-KYGDRVIRLRDGKIESV 224
>pir||E82932 spermidine/putrescine transport ATP-binding protein UU107
[imported] - Ureaplasma urealyticum
>gi|6899063|gb|AAF30513.1|AE002111_2 (AE002111)
spermidine/putrescine transport ATP-binding protein
[Ureaplasma urealyticum]
Length = 519
Score = 148 bits (370), Expect = 9e-35
Identities = 93/265 (35%), Positives = 148/265 (55%), Gaps = 18/265 (6%)
Query: 109 RKVPKQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLS 168
R + K+E+++ V ++GL+ P +LSGG +QRVAL R+++ +P++ L+DEPLS
Sbjct: 270 RLLTKEEVEKEANRVINLVGLSARKDSYPSDLSGGMQQRVALARSLVIQPEIILLDEPLS 329
Query: 169 NLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVY 228
LDAK+R +++ ELKKL + LG+T I VTHDQ EA+++ D++ VM+ G+++QVG P ++Y
Sbjct: 330 ALDAKVRKQLQDELKKLHKNLGITFILVTHDQEEALSLSDKVVVMSNGQIEQVGKPSDIY 389
Query: 229 NKPLNTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFG 288
+ P + +VA FIG N + G ++F K D EN +
Sbjct: 390 DSPNSLWVANFIGK--TNIFEGHYIAKGEVEFDGITSK--TDVINGFSEN----EACYIM 441
Query: 289 IRPEDIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQ 348
IRPED F V++ E + A+V+ V G + + D+I + + + V EG
Sbjct: 442 IRPED-----FDVVKKDEGSINARVESVLYKGLMWDIKCKYNDMIISVEGVNK--VNEGD 494
Query: 349 EAEVFFDMKKAHVFNK---TNERAI 370
E + +D HV K NE+AI
Sbjct: 495 EIGLDWDDIDVHVIKKDYLNNEQAI 519
Score = 99.5 bits (244), Expect = 6e-20
Identities = 53/116 (45%), Positives = 75/116 (63%), Gaps = 7/116 (6%)
Query: 6 LINVWKKFGD-FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDD 64
L ++ K + D F AV + L+IK GEF+ LLGPSGCGKTT L++IAG E+PT G+I +
Sbjct: 8 LRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTNGKILYNG 67
Query: 65 KLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
+ D +P + R + VFQ YAL+P+MTV NI + LKL + PK +D+ +
Sbjct: 68 IDIKD------MPIRLRPTSTVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSI 117
>dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 264
Score = 146 bits (365), Expect = 4e-34
Identities = 87/240 (36%), Positives = 132/240 (54%), Gaps = 16/240 (6%)
Query: 1 MAEVKLINVWKKF------GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEE 54
MA V + +V K F + + ++LEI GEF+ LLGPSGCGK+T L ++AGLE+
Sbjct: 1 MASVMIKDVGKTFEGKEEQSSYQVFENINLEIHSGEFVSLLGPSGCGKSTLLNIVAGLEK 60
Query: 55 PTIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQ 114
+ G +Y+ V +P D +VFQ AL P +TV DN+ F ++ ++ K+
Sbjct: 61 ASNGAVYVGQNKVIEPGP---------DRGVVFQEAALMPWLTVLDNVVFAIR-KQYNKE 110
Query: 115 EIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKL 174
E +R E +++ L++ P ELSGG +QRVA+ RA+ P V LMDEP LD +
Sbjct: 111 EAKKRALEYLKLVHLSKFTHSYPHELSGGMKQRVAIARALALDPDVLLMDEPFGALDEQT 170
Query: 175 RVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNT 234
R + EL+ + +Q T I+VTH+ EA+ + D+I +M +GT +P T
Sbjct: 171 RSMLHRELQAIWQQTKKTIIFVTHNIREAILLSDKIFLMGVRPGGIIGTFSVDMERPRKT 230
>sp|Q58903|YF08_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1508
>gi|2127732|pir||C64488 ABC transporter probable
ATP-binding subunit homolog - Methanococcus jannaschii
>gi|1592142|gb|AAB99520.1| (U67591) ABC transporter,
probable ATP-binding subunit [Methanococcus jannaschii]
Length = 224
Score = 145 bits (363), Expect = 6e-34
Identities = 82/228 (35%), Positives = 136/228 (58%), Gaps = 14/228 (6%)
Query: 1 MAEVKLINVWKKFGD----FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
M E K NVWK +G A+K ++L+I++GEF++++GPSGCGK+T L ++A L+ PT
Sbjct: 1 MIEAK--NVWKIYGKGEAKTIALKNINLKIEEGEFVMIMGPSGCGKSTLLNILALLDTPT 58
Query: 57 IGQIYIDDKL---VADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPK 113
G++Y + +++ E+ IF + + +FQ + L +T +N+ P+ L + K
Sbjct: 59 KGEVYYKGRRTSSMSENERAIF---RRKISGFIFQQFHLIKTLTALENVELPMMLDERDK 115
Query: 114 QEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAK 173
+R +++ EM+GL + L P +LSGGQ+QRVA+ RA+ PK+ DEP NLD+K
Sbjct: 116 SYRRKRAKKLLEMVGLGDRLNHYPHQLSGGQQQRVAIARALANNPKIIFADEPTGNLDSK 175
Query: 174 LRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQV 221
+ + + LK L + G+T I VTH+Q E +I + GE+ ++
Sbjct: 176 SGMAVMSILKGLNEK-GITIIMVTHEQ-ELTKYASKIIKLRDGEIVEI 221
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 145 bits (361), Expect = 1e-33
Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 8/237 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEP----- 55
M+ +++ N+ KKF T + + LE+K GE + ++GPSG GKTT LR I LE+P
Sbjct: 1 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI 60
Query: 56 TIGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQ 114
T+G I ID +K + + + V VFQ++ L+PH TV +NI P+ ++ PK+
Sbjct: 61 TVGDITIDTARSLSQQKSL-IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKE 119
Query: 115 EIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKL 174
E R RE+ +GL PR LSGGQ+QRVA+ RA+ RP+V L DEP S LD +L
Sbjct: 120 EATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPEL 179
Query: 175 RVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
++ +++L ++ T + VTH+ A + DR M++G + + G ++ P
Sbjct: 180 VGEVLNTIRQLAQEKR-TMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADP 235
>pir||C82266 ABC transporter, ATP-binding protein VC0907 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655363|gb|AAF94069.1| (AE004174) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 344
Score = 145 bits (361), Expect = 1e-33
Identities = 84/247 (34%), Positives = 138/247 (55%), Gaps = 9/247 (3%)
Query: 1 MAEVKLINVWKKFGD--FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
M E+K +N GD A+K+++L I G ++G SG GK+T +R + LE+PT G
Sbjct: 1 MIEIKSVNKVFYQGDKQIHALKDINLFIPQGTIFGVIGSSGAGKSTLIRCVNMLEKPTSG 60
Query: 59 QIYIDD---KLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQE 115
Q+ +D +++P+ + R++ M+FQ + L TV++N+A PL+L +Q
Sbjct: 61 QVIVDGVDLTTLSNPQ----LCAARRNIGMIFQHFNLLSSRTVFENVALPLELAGQSQQH 116
Query: 116 IDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLR 175
I+ +V E+ ++GL+E + P LSGGQ+QRVA+ RA+ PKV L DE S LD
Sbjct: 117 IETKVTELLALVGLSEKRESYPANLSGGQKQRVAIARALASDPKVLLCDEATSALDPATT 176
Query: 176 VKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTF 235
+ LK++ RQL +T + +TH+ ++ +A++ GEL + GT +++ P
Sbjct: 177 QSILELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGTVGDIFAHPKTEL 236
Query: 236 VAGFIGS 242
FI S
Sbjct: 237 AHQFIRS 243
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 143 bits (358), Expect = 2e-33
Identities = 80/241 (33%), Positives = 137/241 (56%), Gaps = 6/241 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++K +N W +G+F +K ++L +K GE +V+ GPSG GK+T +R I LEE GQI
Sbjct: 10 MIQIKDMNKW--YGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQI 67
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRR 119
+ + + K I + R+V M FQ + L+PH+TV +N P+ ++K+PK + +
Sbjct: 68 IVAGNELTEDLKNIELV--RREVGMCFQHFNLFPHLTVLENCTLAPIWVKKMPKDKAEEI 125
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ + + E + P +LSGGQ+QRVA+ R++ P++ L DEP S LD ++ ++
Sbjct: 126 AMKYLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPEMVREVL 185
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+ +L + G+T + VTH+ A + DR+ M+ GE+ + P E + P + F
Sbjct: 186 DVMVELAEE-GMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFENPQSDRTQNF 244
Query: 240 I 240
+
Sbjct: 245 L 245
>sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TRANSPORT ATP-BINDING
PROTEIN BZTD >gi|7442514|pir||S77604
glutamate/glutamine/aspartate/asparagine transport
protein - Rhodobacter capsulatus
>gi|1655715|gb|AAB17889.1| (U37407) BztD [Rhodobacter
capsulatus]
Length = 263
Score = 141 bits (353), Expect = 9e-33
Identities = 76/231 (32%), Positives = 137/231 (58%), Gaps = 8/231 (3%)
Query: 3 EVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYI 62
++ +N W +G F +++++L + GE +V+ GPSG GK+T +R I LEE G+I +
Sbjct: 24 QISQMNKW--YGQFHVLRDINLTVHRGERIVIAGPSGSGKSTMIRCINRLEEHQSGKIIV 81
Query: 63 DD-KLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRRV 120
D +L +D + + +V MVFQ + L+PH+T+ +N+ P+ +RKVPK+E +
Sbjct: 82 DGIELTSDLKN---IDKVRSEVGMVFQHFNLFPHLTILENLTLAPIWVRKVPKREAEETA 138
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
E + + E ++ P +LSGGQ+QRVA+ R++ +PK+ L DEP S LD ++ ++
Sbjct: 139 MYYLEKVKIPEQAQKYPGQLSGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMIKEVLD 198
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+ +L + G+T + VTH+ A + +R+ M G++ + P + ++ P
Sbjct: 199 TMIQLAEE-GMTMLCVTHEMGFAQAVANRVIFMADGQIVEQNNPHDFFHNP 248
>pir||E83012 probable ATP-binding component of ABC transporter PA5074 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951367|gb|AAG08459.1|AE004920_9 (AE004920) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 244
Score = 141 bits (351), Expect = 2e-32
Identities = 89/243 (36%), Positives = 136/243 (55%), Gaps = 6/243 (2%)
Query: 1 MAEVK-LINVWKKFGDFT-AVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIG 58
M EV+ L+ V+ G AV ++S + GE LV++GPSG GK+T LR + GLEE G
Sbjct: 1 MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGKSTFLRCLNGLEEFDEG 60
Query: 59 QIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKL-RKVPKQEID 117
+ ID +ADP I R+V MVFQ + L+PHMTV +N+ ++ RK K E +
Sbjct: 61 SVSIDGVDLADPRTDINA--YRREVGMVFQHFNLFPHMTVLENLCLAQRVVRKRGKAERE 118
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVK 177
+ R + +G+ + P LSGGQ+QRVA+ RA+ PKV L DEP S LD ++ +
Sbjct: 119 AKARALLAKVGIGQKADEYPSRLSGGQQQRVAIARALCMDPKVMLFDEPTSALDPEMVGE 178
Query: 178 MRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVA 237
+ +K L + G+T + VTH+ A + DR+ + G+L + P + ++ P +
Sbjct: 179 VLDVMKTLAVE-GMTMVCVTHEMGFAREVADRVLFFDHGKLLEDAPPAQFFDNPQDPRAQ 237
Query: 238 GFI 240
F+
Sbjct: 238 AFL 240
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 140 bits (349), Expect = 3e-32
Identities = 78/241 (32%), Positives = 133/241 (54%), Gaps = 9/241 (3%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++ V K +G F A+K +SL + GE +V+ GPSG GK+T +R + GLE G+I
Sbjct: 1 MKVIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEI 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRR 119
+ +L + + MVFQ + L+PH+TV +N+ P++ K+ QE R
Sbjct: 61 IVLPELDERTRRS-------GKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKER 113
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ + +T+ + P +LSGGQ+QRVA+ R++ +P++ L DEP S LD + +
Sbjct: 114 AYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPE-TINEV 172
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
E+ Q G+T + VTH+ A + R+ M+ GE+ +VG+P++++ P + F
Sbjct: 173 LEVMVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQF 232
Query: 240 I 240
+
Sbjct: 233 L 233
>sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN IDH 3'REGION
>gi|7445619|pir||A70074 ABC transporter (ATP-binding
protein) homolog yxdL - Bacillus subtilis
>gi|709993|dbj|BAA03302.1| (D14399) hypothetical protein
[Bacillus subtilis] >gi|1408484|dbj|BAA08315.1| (D45912)
homologous to FtsE protein of E. coli, belonging to the
ATP-binding-cassette (ABC) family [Bacillus subtilis]
>gi|2636510|emb|CAB16000.1| (Z99124) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 257
Score = 139 bits (347), Expect = 5e-32
Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 1/204 (0%)
Query: 1 MAEVKLIN-VWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
M EVK IN +K + A+K++S I++GEF ++GPSG GKTT L +I+ ++ P G
Sbjct: 4 MLEVKHINKTYKGQVSYQALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGD 63
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
I I+ + ++ + + + VFQ + L +T+ +NI PL L K ++ +
Sbjct: 64 ILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVMEEK 123
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ +A LG+ LL ++ E+SGGQRQR A+ RA+I +P + L DEP NLD+K +
Sbjct: 124 LHGIAAKLGIENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVM 183
Query: 180 AELKKLQRQLGVTTIYVTHDQVEA 203
L+ L R VT + VTHD V A
Sbjct: 184 ETLQSLNRDDHVTALMVTHDPVSA 207
>gb|AAG24255.1| (AY009114) YckI [Bacillus subtilis]
Length = 247
Score = 138 bits (344), Expect = 1e-31
Identities = 79/234 (33%), Positives = 137/234 (57%), Gaps = 6/234 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M VK +N K FG+ +K++ ++I+ G+ + +LGPSG GKTT LR + LE P G++
Sbjct: 1 MLTVKGLN--KSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGEL 58
Query: 61 YIDDKLV--ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEID 117
DD + + K + R MVFQ+Y L+PH T +N+ P++++K K+E+
Sbjct: 59 AFDDFSIDFSKKVKQSDILQLRRKSGMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVR 118
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVK 177
+ ++ + +GL + + P +LSGGQ+QRV + RA+ +P++ L DEP S LD +L +
Sbjct: 119 KEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVGE 178
Query: 178 MRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+ +K L + G T + VTH+ A + D + ++ G + + G P+E+++ P
Sbjct: 179 VLKVIKDLANE-GWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEEIFSAP 231
>pir||I40452 ABC-type transport system probable ATP binding subunit - Bacillus
subtilis >gi|666983|emb|CAA54726.1| (X77636) putative
ATP binding subunit [Bacillus subtilis]
Length = 247
Score = 137 bits (342), Expect = 2e-31
Identities = 78/234 (33%), Positives = 137/234 (58%), Gaps = 6/234 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M VK +N K FG+ +K++ ++I+ G+ + +LGPSG GKTT LR + LE P G++
Sbjct: 1 MLTVKGLN--KSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGEL 58
Query: 61 YIDDKLV--ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEID 117
DD + + K + R MVFQ+Y L+PH T +N+ P++++K K+E+
Sbjct: 59 AFDDFSIDFSKKVKQADILKLRRKSGMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVR 118
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVK 177
+ ++ + +GL + + P +LSGGQ+QRV + RA+ +P++ L DEP S LD +L +
Sbjct: 119 KEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVGE 178
Query: 178 MRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+ +K L + G T + VTH+ A + D + ++ G + + G P+++++ P
Sbjct: 179 VLKVIKDLANE-GWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFSAP 231
>sp|P39456|YCKI_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YCKI
>gi|7442523|pir||C69761 ABC-type transport protein yckI
- Bacillus subtilis >gi|1805430|dbj|BAA08992.1| (D50453)
homologue of glutamine transport ATP-binding protein
GlnQ of E. coli [Bacillus subtilis]
>gi|2632645|emb|CAB12153.1| (Z99105) similar to
glutamine ABC transporter (ATP-binding protein)
[Bacillus subtilis] >gi|2632660|emb|CAB12167.1| (Z99106)
similar to glutamine ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 247
Score = 137 bits (341), Expect = 2e-31
Identities = 78/234 (33%), Positives = 137/234 (58%), Gaps = 6/234 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M VK +N K FG+ +K++ ++I+ G+ + +LGPSG GKTT LR + LE P G++
Sbjct: 1 MLTVKGLN--KSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGEL 58
Query: 61 YIDDKLV--ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEID 117
DD + + K + R MVFQ+Y L+PH T +N+ P++++K K+E+
Sbjct: 59 AFDDFSIDFSKKVKQADILKLRRKSPMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVR 118
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVK 177
+ ++ + +GL + + P +LSGGQ+QRV + RA+ +P++ L DEP S LD +L +
Sbjct: 119 KEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVGE 178
Query: 178 MRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+ +K L + G T + VTH+ A + D + ++ G + + G P+++++ P
Sbjct: 179 VLKVIKDLANE-GWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFSAP 231
>sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YTMN
>gi|7442519|pir||F69641 histidine transport protein hisP
- Bacillus subtilis >gi|2293251|gb|AAC00329.1|
(AF008220) putative amino acid transporter [Bacillus
subtilis] >gi|2635399|emb|CAB14894.1| (Z99118) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis] >gi|2635418|emb|CAB14912.1| (Z99119) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis]
Length = 259
Score = 137 bits (341), Expect = 2e-31
Identities = 86/234 (36%), Positives = 130/234 (54%), Gaps = 13/234 (5%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M E+K N+ K+FG +K ++L ++ GE + ++GPSG GKTT LR + LE P G I
Sbjct: 1 MIEIK--NIHKQFGIHHVLKGINLTVRKGEVVTIIGPSGSGKTTFLRCLNLLERPDEGII 58
Query: 61 YIDDKLVADPEKGIFVPPKE-----RDVAMVFQSYALYPHMTVYDNIAFPLKL-RKVPKQ 114
I DK++ F KE + AMVFQ Y L+ H TV +N+ L + RK+ KQ
Sbjct: 59 SIHDKVI----NCRFPSKKEVHWLRKQTAMVFQQYHLFAHKTVIENVMEGLTIARKMRKQ 114
Query: 115 EIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKL 174
+ +GL + L P +LSGGQ+QRV + RA+ P V L DEP + LD +L
Sbjct: 115 DAYAVAENELRKVGLQDKLNAYPSQLSGGQKQRVGIARALAIHPDVLLFDEPTAALDPEL 174
Query: 175 RVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVY 228
++ + ++ + G T I VTH+ A + D++ M+ G + + GTP+EV+
Sbjct: 175 VGEVLEVMLEIVK-TGATMIVVTHEMEFARRVSDQVVFMDEGVIVEQGTPEEVF 227
>gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus pyogenes]
Length = 307
Score = 135 bits (336), Expect = 9e-31
Identities = 84/254 (33%), Positives = 138/254 (54%), Gaps = 11/254 (4%)
Query: 1 MAEVKLINVWKKFGD----FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
+ EVK + + FG+ F AVK + IK GE L+G SG GKTT R I GL + +
Sbjct: 5 LVEVKDLEI--SFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTS 62
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYA--LYPHMTVYDNIA---FPLKLRKV 111
GQI D K++ + R + M+FQ A L TV I+ + L K
Sbjct: 63 SGQILYDGKVINGRKSKSEANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKT 122
Query: 112 PKQEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLD 171
++ ++ +AE+ L+E L R P E SGGQRQR+ + RA++ P+ + DEP+S LD
Sbjct: 123 EEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIGIARALVMNPEFVIADEPISALD 182
Query: 172 AKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+R ++ LK++Q + G+T +++ HD + DRIAV+++G + +V +E++N P
Sbjct: 183 VSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFNNP 242
Query: 232 LNTFVAGFIGSPPM 245
++ + + + P+
Sbjct: 243 IHPYTQSLLSAVPI 256
>pir||H82425 molybdenum ABC transporter, ATP-binding protein VCA0724 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658144|gb|AAF96623.1| (AE004401) molybdenum ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 366
Score = 134 bits (335), Expect = 1e-30
Identities = 93/340 (27%), Positives = 178/340 (52%), Gaps = 31/340 (9%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M+EV ++ + K+ G+ ++ L + + G SG GKT+ + +I+GL P +G+I
Sbjct: 1 MSEV-ILQLQKRLGETQL--DVDLRLPAVGICAIFGRSGAGKTSLINLISGLTTPDVGEI 57
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
++ + + +GI +P ++R + VFQ L+PH TV N+ + +
Sbjct: 58 HLAGRTLFSSSQGIQLPIEQRKIGYVFQDARLFPHYTVRGNLNYGVT------DADPEYF 111
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
V +L L LL R PR+LSGG++QRVA+GRA++ +P + LMDEPL++LD + ++
Sbjct: 112 ASVTRLLALEPLLVRYPRDLSGGEKQRVAIGRALLSKPDLLLMDEPLASLDMPRKKEVMP 171
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYN----KPLNTFV 236
L+ L + + +YV+H E + + D + V+ +G++ G ++V++ +P +F
Sbjct: 172 FLENLAQHFRLPILYVSHSMQEILRLADHLVVLEQGKVLSAGPIEQVWSSKAMRPWQSF- 230
Query: 237 AGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-IGKEVIFGIRPEDIY 295
S +ATV+ +G +++L +D + +++ +G V +R D+
Sbjct: 231 -----SEQSTLFSATVAKH-HQTYGLTQVRLAEDVWLWVQQVEADVGSSVRMQVRANDV- 283
Query: 296 DASFIRVEEP-----ENIVRAKVDIVEN-LGGEKIVHLRL 329
I +++P NI+ A++ +E+ +K V L+L
Sbjct: 284 ---SIALDKPTASSIRNILPARIVAIEHQQPSKKSVSLKL 320
>emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aureus]
>gi|9501787|dbj|BAB03336.1| (AB035452) ABC transporter
[Staphylococcus aureus]
Length = 252
Score = 134 bits (333), Expect = 2e-30
Identities = 65/221 (29%), Positives = 127/221 (57%), Gaps = 4/221 (1%)
Query: 1 MAEVKLINVWKKFGD---FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTI 57
M + + +V K +G F A+K+++ +I+ GEF+ ++GPSG GKTT L +++ +++ +
Sbjct: 1 MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLSSIDQISS 60
Query: 58 GQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEID 117
G + + + + + ++ + +FQ Y++ P +TV +NI PL ++K+ K ++
Sbjct: 61 GSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVKENIMLPLSVQKMSKATME 120
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVK 177
+ + LG+ +L + P ELSGGQ+QR A RA + +P++ DEP LD+K
Sbjct: 121 ENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHKPQIIFADEPTGALDSKSAND 180
Query: 178 MRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGEL 218
+ L+++ + T + VTHD V A + +R+ ++ G++
Sbjct: 181 LLQRLEEMNKSFDTTIVMVTHDPV-AASFAERVIMLKDGQI 220
>pir||F81363 probable glutamine transport ATP-binding protein Cj0902 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968340|emb|CAB73160.1| (AL139076) putative
glutamine transport ATP-binding protein [Campylobacter
jejuni]
Length = 242
Score = 134 bits (333), Expect = 2e-30
Identities = 78/241 (32%), Positives = 140/241 (57%), Gaps = 6/241 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M EVK N+ KK+G+ +K ++ I G+ + ++GPSG GK+T LR I LE G+I
Sbjct: 1 MIEVK--NLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELADSGEI 58
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAF-PLKLRKVPKQEIDRR 119
I+ + + D E I + + V+MVFQ + L+ + V +N+ P+K + ++E ++
Sbjct: 59 LINKQNILDKE--IDINKIRQKVSMVFQHFNLFANKNVMENLCLTPIKTGILSQEEAIKK 116
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ + +GL + P +LSGGQ+QR+A+ R+++ P V L DEP S LD ++ ++
Sbjct: 117 AKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGEVL 176
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
+ +K + ++ G+T + VTH+ A + +RI M++G++ +P EV+ P N + F
Sbjct: 177 SIMKDVAKE-GLTMLVVTHEMGFARNVANRIFFMDKGKIAVDASPKEVFENPSNERLREF 235
Query: 240 I 240
+
Sbjct: 236 L 236
>pir||F83122 probable ATP-binding component of ABC transporter PA4192 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950402|gb|AAG07579.1|AE004835_8 (AE004835) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 247
Score = 132 bits (330), Expect = 5e-30
Identities = 77/232 (33%), Positives = 129/232 (55%), Gaps = 6/232 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M ++ +N W +G + A+ ++ ++ GE +V+ GPSG GK+T +R + LE G+I
Sbjct: 1 MIRLEKVNKW--YGAYHALADVDEQVGRGEVVVVCGPSGSGKSTLIRTLNRLEPIQGGRI 58
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFP-LKLRKVPKQEIDRR 119
ID + + P G+ + + VFQ + L+PH+ V DN L+LR + E R+
Sbjct: 59 LIDGQDIHAP--GLDLNRFRSHIGFVFQQFNLFPHLNVLDNCTLASLRLRGLKPAEARRQ 116
Query: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
+ E +GL + P LSGGQ+QRVA+ RA+ P + L DEP S LD ++ ++
Sbjct: 117 AMALLERVGLADKAAAFPARLSGGQQQRVAIARALAMEPPLMLFDEPTSALDPEMVGEVL 176
Query: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
++ L R G+T + VTH+ A + DR+ M+ G + + +PD+ +N+P
Sbjct: 177 LVMRDLARD-GMTMVVVTHEMGFAHDVADRVLFMDAGRVLERASPDDFFNRP 227
>pir||D83281 histidine transport protein HisP PA2926 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949020|gb|AAG06314.1|AE004718_11 (AE004718)
histidine transport protein HisP [Pseudomonas
aeruginosa]
Length = 255
Score = 132 bits (328), Expect = 8e-30
Identities = 81/256 (31%), Positives = 144/256 (55%), Gaps = 22/256 (8%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M +++ ++ K++G ++ +SL G+ + ++G SG GK+T LR + LE+P G I
Sbjct: 1 MYSLQVEDIHKRYGSHEVLRGVSLRAGKGDVISIIGSSGSGKSTFLRCVNFLEKPCAGHI 60
Query: 61 YIDDKLV------------ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIA-FPLK 107
+ D+ + ADP + + + +AMVFQ + L+ H+TV +N+ P+
Sbjct: 61 RVGDEELRTRPGALGELRAADPRQLQRIRSR---LAMVFQHFNLWSHLTVLENVVECPVN 117
Query: 108 LRKVPKQEIDRRVREVAEMLGLTELLKRK-PRELSGGQRQRVALGRAIIRRPKVFLMDEP 166
+ ++ + + R R +GL E ++R+ P ELSGGQ+QRVA+ RA+ P+V L DEP
Sbjct: 118 VLRMNRDDAVARARHYLAKVGLAEKVERQYPCELSGGQQQRVAIARALAMEPQVMLFDEP 177
Query: 167 LSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDE 226
S LD +L ++ +++L + G T + VTH+ A + + +++G +++ GTPD+
Sbjct: 178 TSALDPELVGEVLKVMQQLAEE-GRTMVLVTHEMAFARQVSSHVIFLHQGVIEEEGTPDQ 236
Query: 227 VYNKP----LNTFVAG 238
V+ P L F+AG
Sbjct: 237 VFGAPRSERLRQFLAG 252
>sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN AMIF
>gi|98019|pir||S11153 oligopeptide transport protein
amiF - Streptococcus pneumoniae
>gi|47347|emb|CAA35217.1| (X17337) AmiF protein
[Streptococcus pneumoniae]
Length = 308
Score = 131 bits (327), Expect = 1e-29
Identities = 84/254 (33%), Positives = 136/254 (53%), Gaps = 11/254 (4%)
Query: 1 MAEVKLINVWKKFGD----FTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
+ E+K + + FG+ F AVK + I GE L+G SG GKTT R I GL + +
Sbjct: 5 LVEIKDLEI--SFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTS 62
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYA--LYPHMTVYDNIAFPLKLRKVPKQ 114
G I D + + + R + M+FQ A L TV I+ L ++ K
Sbjct: 63 NGDIIFDGQKINGKKSREQAAELIRRIQMIFQDPAASLNERATVDYIISEGLYNHRLFKD 122
Query: 115 EIDRR--VREVAEMLGL-TELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLD 171
E +R+ V+ + +GL E L R P E SGGQRQR+ + RA++ +P + DEP+S LD
Sbjct: 123 EEERKEKVQSIIREVGLLAEHLTRYPHEFSGGQRQRIGIARALVMQPDFVIADEPISALD 182
Query: 172 AKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKP 231
+R ++ LKK Q++LG+T +++ HD + DRIAV+ +G + +V +E++N P
Sbjct: 183 VSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFNNP 242
Query: 232 LNTFVAGFIGSPPM 245
++ + + + P+
Sbjct: 243 IHPYTQALLSAVPI 256
>emb|CAA71848.1| (Y10908) sulfate transport ATP-binding protein [Bacillus cereus]
Length = 233
Score = 130 bits (324), Expect = 2e-29
Identities = 75/195 (38%), Positives = 112/195 (56%), Gaps = 13/195 (6%)
Query: 134 KRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTT 193
KR P +LSGGQRQR+AL RA+ PK+ L+DEP LDAK+R ++R L+KL + +T+
Sbjct: 7 KRYPAQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLRKLHDEFQITS 66
Query: 194 IYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVS 253
++VTHDQ EA+ + DRI VMN G ++Q+GTP+EVY P + FV F+G+ +N V
Sbjct: 67 VFVTHDQEEALDVADRIVVMNEGRIEQMGTPEEVYENPASPFVYDFLGN--VNLFHGRVH 124
Query: 254 SDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVEEPENIVRAKV 313
G L+ G L E E ++ + + +RP + S R ++ + + AKV
Sbjct: 125 K-GKLNVGSVEL-------EAPEHKHISNVDGVAYVRPHHL---SISRTKQSVDAIPAKV 173
Query: 314 DIVENLGGEKIVHLR 328
+G V L+
Sbjct: 174 SYSHAVGPVVYVELK 188
>pir||S71363 probable ATP-binding cassette transporter ABC-3 - human
>gi|1514530|emb|CAA65825.1| (X97187) ABC-C transporter
[Homo sapiens]
Length = 1704
Score = 126 bits (313), Expect = 5e-28
Identities = 80/228 (35%), Positives = 132/228 (57%), Gaps = 13/228 (5%)
Query: 1 MAEVKLINVWKKFG----DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
+A +K+ ++ K F D AV++L+L + +G+ VLLG +G GKTTTL M+ GL PT
Sbjct: 527 VAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPT 586
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G+ YI ++ I + + + Q L+ ++TV +++ F +L+ + +Q+
Sbjct: 587 SGRAYISGYEISQDMVQI-----RKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKC 641
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
V+++ ++GL + + R LSGG R+++++G A+I KV ++DEP S +DA +
Sbjct: 642 PEEVKQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDA---I 698
Query: 177 KMRAELKKLQRQLGVTTIYV-THDQVEAMTMGDRIAVMNRGELQQVGT 223
RA LQRQ TI + TH EA +GDRIA+M +GELQ G+
Sbjct: 699 SRRAIWDLLQRQKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGS 746
Score = 96.7 bits (237), Expect = 4e-19
Identities = 85/321 (26%), Positives = 148/321 (45%), Gaps = 39/321 (12%)
Query: 5 KLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDD 64
+L V+++ AV LSL ++ GE LLG +G GKTTT +M+ G E T G ++
Sbjct: 1385 ELSKVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGG 1444
Query: 65 KLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVA 124
++ V + + Q AL HMT + + +LR +P++ I V
Sbjct: 1445 HRISSD-----VGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL 1499
Query: 125 EMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKK 184
L L + R SGG +++++ G A+I P V +DEP + +D R ++ +
Sbjct: 1500 RGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVAR-RLLWDTVA 1558
Query: 185 LQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPP 244
R+ G I +H E + R+A+M +G+ + +G+P + +K F +G+
Sbjct: 1559 RARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSK----FGSGY----- 1609
Query: 245 MNFLTATVSSDG----------FLDFGEFRLKLLKDQFEVLEENNLIGKEV----IFGIR 290
L A V S+G F+D F +L+D+ + + +L G+++ +FGI
Sbjct: 1610 --SLRAKVQSEGQQEALEEFKAFVDL-TFPGSVLEDEHQGMVHYHLPGRDLSWAKVFGIL 1666
Query: 291 PE-------DIYDASFIRVEE 304
+ D Y S I +E+
Sbjct: 1667 EKAKEKYGVDDYSVSQISLEQ 1687
>gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-binding cassette
3; ABC transporter 3 [Homo sapiens]
>gi|7387524|sp|Q99758|ABC3_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 3 (ATP-BINDING CASSETTE TRANSPORTER
3) (ATP-BINDING CASSETTE 3) (ABC-C TRANSPORTER)
>gi|11278926|pir||A59188 ATP-binding cassette
transporter ABC3 - human >gi|1699038|gb|AAC50967.1|
(U78735) ABC3 [Homo sapiens]
Length = 1704
Score = 126 bits (313), Expect = 5e-28
Identities = 80/228 (35%), Positives = 132/228 (57%), Gaps = 13/228 (5%)
Query: 1 MAEVKLINVWKKFG----DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
+A +K+ ++ K F D AV++L+L + +G+ VLLG +G GKTTTL M+ GL PT
Sbjct: 527 VAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPT 586
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G+ YI ++ I + + + Q L+ ++TV +++ F +L+ + +Q+
Sbjct: 587 SGRAYISGYEISQDMVQI-----RKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKC 641
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
V+++ ++GL + + R LSGG R+++++G A+I KV ++DEP S +DA +
Sbjct: 642 PEEVKQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDA---I 698
Query: 177 KMRAELKKLQRQLGVTTIYV-THDQVEAMTMGDRIAVMNRGELQQVGT 223
RA LQRQ TI + TH EA +GDRIA+M +GELQ G+
Sbjct: 699 SRRAIWDLLQRQKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGS 746
Score = 96.7 bits (237), Expect = 4e-19
Identities = 85/321 (26%), Positives = 148/321 (45%), Gaps = 39/321 (12%)
Query: 5 KLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDD 64
+L V+++ AV LSL ++ GE LLG +G GKTTT +M+ G E T G ++
Sbjct: 1385 ELSKVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGG 1444
Query: 65 KLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVA 124
++ V + + Q AL HMT + + +LR +P++ I V
Sbjct: 1445 HRISSD-----VGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL 1499
Query: 125 EMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKK 184
L L + R SGG +++++ G A+I P V +DEP + +D R ++ +
Sbjct: 1500 RGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVAR-RLLWDTVA 1558
Query: 185 LQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPP 244
R+ G I +H E + R+A+M +G+ + +G+P + +K F +G+
Sbjct: 1559 RARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSK----FGSGY----- 1609
Query: 245 MNFLTATVSSDG----------FLDFGEFRLKLLKDQFEVLEENNLIGKEV----IFGIR 290
L A V S+G F+D F +L+D+ + + +L G+++ +FGI
Sbjct: 1610 --SLRAKVQSEGQQEALEEFKAFVDL-TFPGSVLEDEHQGMVHYHLPGRDLSWAKVFGIL 1666
Query: 291 PE-------DIYDASFIRVEE 304
+ D Y S I +E+
Sbjct: 1667 EKAKEKYGVDDYSVSQISLEQ 1687
>gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sapiens]
Length = 1704
Score = 126 bits (313), Expect = 5e-28
Identities = 80/228 (35%), Positives = 132/228 (57%), Gaps = 13/228 (5%)
Query: 1 MAEVKLINVWKKFG----DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 56
+A +K+ ++ K F D AV++L+L + +G+ VLLG +G GKTTTL M+ GL PT
Sbjct: 527 VAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPT 586
Query: 57 IGQIYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI 116
G+ YI ++ I + + + Q L+ ++TV +++ F +L+ + +Q+
Sbjct: 587 SGRAYISGYEISQDMVQI-----RKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKC 641
Query: 117 DRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRV 176
V+++ ++GL + + R LSGG R+++++G A+I KV ++DEP S +DA +
Sbjct: 642 PEEVKQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDA---I 698
Query: 177 KMRAELKKLQRQLGVTTIYV-THDQVEAMTMGDRIAVMNRGELQQVGT 223
RA LQRQ TI + TH EA +GDRIA+M +GELQ G+
Sbjct: 699 SRRAIWDLLQRQKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGS 746
Score = 96.7 bits (237), Expect = 4e-19
Identities = 85/321 (26%), Positives = 148/321 (45%), Gaps = 39/321 (12%)
Query: 5 KLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDD 64
+L V+++ AV LSL ++ GE LLG +G GKTTT +M+ G E T G ++
Sbjct: 1385 ELSKVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGG 1444
Query: 65 KLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVA 124
++ V + + Q AL HMT + + +LR +P++ I V
Sbjct: 1445 HRISSD-----VGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL 1499
Query: 125 EMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKK 184
L L + R SGG +++++ G A+I P V +DEP + +D R ++ +
Sbjct: 1500 RGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVAR-RLLWDTVA 1558
Query: 185 LQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPP 244
R+ G I +H E + R+A+M +G+ + +G+P + +K F +G+
Sbjct: 1559 RARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSK----FGSGY----- 1609
Query: 245 MNFLTATVSSDG----------FLDFGEFRLKLLKDQFEVLEENNLIGKEV----IFGIR 290
L A V S+G F+D F +L+D+ + + +L G+++ +FGI
Sbjct: 1610 --SLRAKVQSEGQQEALEEFKAFVDL-TFPGSVLEDEHQGMVHYHLPGRDLSWAKVFGIL 1666
Query: 291 PE-------DIYDASFIRVEE 304
+ D Y S I +E+
Sbjct: 1667 EKAKEKYGVDDYSVSQISLEQ 1687
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 109 bits (271), Expect = 4e-23
Identities = 70/223 (31%), Positives = 114/223 (50%), Gaps = 7/223 (3%)
Query: 11 KKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADP 70
KKFGDF A ++ +K GE LLGP+G GK+TT +M+ GL PT GQ LV
Sbjct: 342 KKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQ-----ALVLGM 396
Query: 71 EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLT 130
+ + + + Q ++LY ++TV N+ F + + + + ++ ++E GL
Sbjct: 397 DLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLK 456
Query: 131 ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLG 190
+ EL G +QR+AL +++ P + +DEP S +D R + + + + G
Sbjct: 457 SIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEK-G 515
Query: 191 VTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
VT + TH EA DRI ++ RG+L GTPD++ + N
Sbjct: 516 VTVMVTTHFMDEA-EYCDRIGLVYRGKLIASGTPDDLKAQSAN 557
Score = 87.0 bits (212), Expect = 3e-16
Identities = 102/374 (27%), Positives = 155/374 (41%), Gaps = 56/374 (14%)
Query: 2 AEVKLINVWKKFG--DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
A + L + K+F D AV L I G L+GP G GKTT +RM+AGL +P G
Sbjct: 9 AVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGS 68
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAM------VFQSYALYPHMTVYDNIAFPLKLRKVPK 113
+ I P + D A+ + Q + LY +TV +N+ LR V
Sbjct: 69 ATV-----------IGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTG 117
Query: 114 QEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAK 173
+ + + E L R +LSGG +Q++ L ++ PKV L+DEP +D
Sbjct: 118 EARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPI 177
Query: 174 LRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
R ++ + +L + G+ ++ T EA D + +MN GEL G P K L
Sbjct: 178 SRRELWQMVHELAGE-GMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEP-----KALT 230
Query: 234 TFVAG--FIGSPP--------MNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGK 283
+AG F+ + P L SDG + RL L K+
Sbjct: 231 QTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKE------------- 277
Query: 284 EVIFGIRPEDIYDASFI-RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAK-FPQE 341
P+DI A + + E R + ++ LGG LG I+ T + P E
Sbjct: 278 -----ATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGE 332
Query: 342 SVVEEGQEAEVFFD 355
+V+E + + F D
Sbjct: 333 TVIEAKELTKKFGD 346
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 109 bits (271), Expect = 4e-23
Identities = 70/223 (31%), Positives = 114/223 (50%), Gaps = 7/223 (3%)
Query: 11 KKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADP 70
KKFGDF A ++ +K GE LLGP+G GK+TT +M+ GL PT GQ LV
Sbjct: 337 KKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQ-----ALVLGM 391
Query: 71 EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLT 130
+ + + + Q ++LY ++TV N+ F + + + + ++ ++E GL
Sbjct: 392 DLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLK 451
Query: 131 ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLG 190
+ EL G +QR+AL +++ P + +DEP S +D R + + + + G
Sbjct: 452 SIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEK-G 510
Query: 191 VTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
VT + TH EA DRI ++ RG+L GTPD++ + N
Sbjct: 511 VTVMVTTHFMDEA-EYCDRIGLVYRGKLIASGTPDDLKAQSAN 552
Score = 87.0 bits (212), Expect = 3e-16
Identities = 102/374 (27%), Positives = 155/374 (41%), Gaps = 56/374 (14%)
Query: 2 AEVKLINVWKKFG--DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ 59
A + L + K+F D AV L I G L+GP G GKTT +RM+AGL +P G
Sbjct: 4 AVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGS 63
Query: 60 IYIDDKLVADPEKGIFVPPKERDVAM------VFQSYALYPHMTVYDNIAFPLKLRKVPK 113
+ I P + D A+ + Q + LY +TV +N+ LR V
Sbjct: 64 ATV-----------IGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTG 112
Query: 114 QEIDRRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAK 173
+ + + E L R +LSGG +Q++ L ++ PKV L+DEP +D
Sbjct: 113 EARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPI 172
Query: 174 LRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
R ++ + +L + G+ ++ T EA D + +MN GEL G P K L
Sbjct: 173 SRRELWQMVHELAGE-GMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEP-----KALT 225
Query: 234 TFVAG--FIGSPP--------MNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGK 283
+AG F+ + P L SDG + RL L K+
Sbjct: 226 QTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKE------------- 272
Query: 284 EVIFGIRPEDIYDASFI-RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAK-FPQE 341
P+DI A + + E R + ++ LGG LG I+ T + P E
Sbjct: 273 -----ATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGE 327
Query: 342 SVVEEGQEAEVFFD 355
+V+E + + F D
Sbjct: 328 TVIEAKELTKKFGD 341
>gb|AAG01549.1|AF291822_1 (AF291822) multidrug resistance protein MDR [Trichophyton rubrum]
Length = 1217
Score = 101 bits (250), Expect = 1e-20
Identities = 68/216 (31%), Positives = 117/216 (53%), Gaps = 15/216 (6%)
Query: 19 VKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGIFVPP 78
++ L+L +K G+++ L+GPSGCGK+TT+ ++ + G +YID K ++ + V
Sbjct: 990 LRGLNLTVKPGQYIALVGPSGCGKSTTIALVERFYDTLSGGVYIDGKDIS----RLNVNS 1045
Query: 79 KERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDR--RVREVAEML-----GLTE 131
+A+V Q LY T+ DN+ + VP +++ + + + + G
Sbjct: 1046 YRSHLALVSQEPTLY-QGTIRDNVLLGVDRDDVPDEQVFAACKAANIYDFIMSLPDGFGT 1104
Query: 132 LLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGV 191
++ K LSGGQ+QR+A+ RA+IR PKV L+DE S LD++ ++A L + G
Sbjct: 1105 VVGSKGSMLSGGQKQRIAIARALIRDPKVLLLDEATSALDSESEKVVQAALDAAAK--GR 1162
Query: 192 TTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEV 227
TTI V H ++ + D I V ++G + + GT E+
Sbjct: 1163 TTIAVAH-RLSTIQKADIIYVFDQGRIVESGTHHEL 1197
Score = 92.8 bits (227), Expect = 6e-18
Identities = 83/339 (24%), Positives = 160/339 (46%), Gaps = 36/339 (10%)
Query: 15 DFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKGI 74
+ +++++L + G+ L+GPSG GK+T + ++ P G + +D + + K +
Sbjct: 322 EVVVMEDINLVVPKGKTTALVGPSGSGKSTVVGLLERFYNPVSGSVLLDGRDI----KTL 377
Query: 75 FVPPKERDVAMVFQSYALYPHMTVYDNIAFPL---KLRKVPKQEIDRRVREVAEMLGLTE 131
+ + +++V Q L+ T+++NI L + +++I R+ A+ +
Sbjct: 378 NLRWLRQQISLVSQEPTLFG-TTIFENIRLGLIGSPMENESEEQIKERIVSAAKEANAHD 436
Query: 132 LLKRKPRE-----------LSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
+ P LSGGQ+QR+A+ RAI+ PK+ L+DE S LD K ++A
Sbjct: 437 FIMGLPDGYATDVGQRGFLLSGGQKQRIAIARAIVSDPKILLLDEATSALDTKSEGVVQA 496
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
L R G TTI + H ++ + D I V+ G + + GT DE+ +K T++ +
Sbjct: 497 ALDAASR--GRTTIVIAH-RLSTIKSADNIVVIVGGRIAEQGTHDELVDKK-GTYLQ-LV 551
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
+ +N S D +L+ + E+ + ++ K V G P++ +A+
Sbjct: 552 EAQKINEERGEESEDE---------AVLEKEKEISRQISVPAKSVNSGKYPDEDVEANLG 602
Query: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDII-FTAKF 338
R++ +++ + V + + EK LG +I F A F
Sbjct: 603 RIDTKKSL--SSVILSQKRSQEKETEYSLGTLIRFIAGF 639
>emb|CAC11779.1| (AL445064) daunorubicin resistance protein related protein
[Thermoplasma acidophilum]
Length = 327
Score = 98.3 bits (241), Expect = 1e-19
Identities = 75/283 (26%), Positives = 137/283 (47%), Gaps = 16/283 (5%)
Query: 17 TAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDD-KLVADPEKGIF 75
TA++ +S EI L+G +G GKTT +R++A PT G+++IDD ++ +P+
Sbjct: 41 TALRSVSFEIPMHGVFSLIGRNGAGKTTLVRILATELMPTSGKVFIDDIDIIREPDS--- 97
Query: 76 VPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREVAEMLGLTELLKR 135
R +A++ Q +T + L R + E R +EV LGL + R
Sbjct: 98 ---IRRRIAIIPQEARAISWLTPMQTVTTFLLYRGIRYSEAKARAKEVLADLGLASVADR 154
Query: 136 KPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIY 195
R LSGGQ+++V + + + MDEP + LD R ++ L L+++ +
Sbjct: 155 MNRMLSGGQKRKVLVAALVASDADILFMDEPTTGLDPISRSELWDILSDLKKEKFI--FL 212
Query: 196 VTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNFLTATVSSD 255
TH EA + DRI ++++GE++ +GT ++ + + + N + ++
Sbjct: 213 TTHYLEEAERLSDRIGILDQGEMKAIGTMSDLRSMVPKKYSISLVDKENGNI---EIENN 269
Query: 256 GFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRP---EDIY 295
G + R+ + +++ V+ +LI + + F I P EDIY
Sbjct: 270 GSVIKVGSRIFVDENEAYVI-ARDLINRNIRFSINPVSLEDIY 311
>pir||D70184 probable ribose/galactose ABC transporter mglA - Lyme disease
spirochete >gi|2688601|gb|AAC67018.1| (AE001168)
ribose/galactose ABC transporter, ATP-binding protein
(mglA) [Borrelia burgdorferi]
Length = 536
Score = 97.5 bits (239), Expect = 2e-19
Identities = 75/306 (24%), Positives = 141/306 (45%), Gaps = 24/306 (7%)
Query: 6 LINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDK 65
L N+ KK+GDF A +S++ K GE +LG +G GKTT ++ I G+ + G+I + +
Sbjct: 8 LENITKKYGDFVANDNVSIKFKAGEVHAILGENGAGKTTLMKTIYGIHQVNSGRIILKGQ 67
Query: 66 LV--ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRK---VPKQEIDRRV 120
+ D + I + MVFQ + L P T NI + K + ++ +++
Sbjct: 68 EINFKDSSEAI-----RNGIGMVFQHFMLIPQFTAVQNIILGYENSKFGFLDYKQARKKI 122
Query: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
++E GL L+++ +LS G Q++ + + + R + + DEP + L A V
Sbjct: 123 SSLSEKYGLKIDLEKRVEDLSVGMEQKIEILKVLYRNADIIIFDEPTAVL-APSEVDDFI 181
Query: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
+ K+ Q G T I +TH E ++ + +M G++ + ++ +K L + G
Sbjct: 182 NILKVLAQEGHTVILITHKIKEIRSIAKKCTIMRLGKVVKTVNIADIDDKDLTKLMIG-- 239
Query: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLE---------ENNLIGKEVIFGIRP 291
+ ++ + + + E + +KD+ VL+ ++G I G
Sbjct: 240 --KEVALRSSKIKFENHFNILEIKNLSVKDERGVLKVKDVNLDLRNGEILGISGIEGSGQ 297
Query: 292 EDIYDA 297
ED+ DA
Sbjct: 298 EDLVDA 303
>pir||D64507 methyl coenzyme M reductase system, component A2 homolog -
Methanococcus jannaschii
Length = 558
Score = 92.8 bits (227), Expect = 6e-18
Identities = 94/364 (25%), Positives = 167/364 (45%), Gaps = 30/364 (8%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M VK+ N+ KK+GDF A+ ++S E K GE L ++G SG GK+T +R++ G + G++
Sbjct: 4 MITVKVKNLTKKYGDFKALDKVSFEAKKGEILGIVGKSGAGKSTLIRILRGSLDYDEGEV 63
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQ---SYALYPHMTVYDNIAFPLKLRKVPKQEID 117
I + D K I +R+ A+ + + + + +N L L + +E +
Sbjct: 64 EILGR--KDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEE-EWEEYE 120
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAII----RRPKVFLMDEPLSNLDAK 173
+ E+ +++GL LSGG++QR+ LGR I + V L+DEP +
Sbjct: 121 KTAIEILKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEPATMACPA 180
Query: 174 LRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
+ K+ +K ++ +LG+T I +H + DR+ ++ G+++ G +EV N+ L
Sbjct: 181 SKQKLLDVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEEVLNEFLK 240
Query: 234 TFVAGFIGSPPMN----FLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-------IG 282
+ +P + VS ++ G L L F+V E L +G
Sbjct: 241 KMKPPYKRTPNIKDNAIIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVG 300
Query: 283 KEVIFGIRPEDIYDASFIRVEEPENIVRAKVDIVENLGGEKI-VHLRLGDIIFTAKFPQE 341
K VI + + + + + I+ +DI N G E+I + R+G + P
Sbjct: 301 KTVIMRL-------MAGLELPDEGKIIVDGIDIT-NYGWERIELRKRIGIMHQEFSLPYY 352
Query: 342 SVVE 345
VE
Sbjct: 353 QTVE 356
>gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, component A2-like
[Methanococcus jannaschii]
Length = 555
Score = 92.8 bits (227), Expect = 6e-18
Identities = 94/364 (25%), Positives = 167/364 (45%), Gaps = 30/364 (8%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
M VK+ N+ KK+GDF A+ ++S E K GE L ++G SG GK+T +R++ G + G++
Sbjct: 1 MITVKVKNLTKKYGDFKALDKVSFEAKKGEILGIVGKSGAGKSTLIRILRGSLDYDEGEV 60
Query: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQ---SYALYPHMTVYDNIAFPLKLRKVPKQEID 117
I + D K I +R+ A+ + + + + +N L L + +E +
Sbjct: 61 EILGR--KDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEE-EWEEYE 117
Query: 118 RRVREVAEMLGLTELLKRKPRELSGGQRQRVALGRAII----RRPKVFLMDEPLSNLDAK 173
+ E+ +++GL LSGG++QR+ LGR I + V L+DEP +
Sbjct: 118 KTAIEILKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEPATMACPA 177
Query: 174 LRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
+ K+ +K ++ +LG+T I +H + DR+ ++ G+++ G +EV N+ L
Sbjct: 178 SKQKLLDVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEEVLNEFLK 237
Query: 234 TFVAGFIGSPPMN----FLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNL-------IG 282
+ +P + VS ++ G L L F+V E L +G
Sbjct: 238 KMKPPYKRTPNIKDNAIIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVG 297
Query: 283 KEVIFGIRPEDIYDASFIRVEEPENIVRAKVDIVENLGGEKI-VHLRLGDIIFTAKFPQE 341
K VI + + + + + I+ +DI N G E+I + R+G + P
Sbjct: 298 KTVIMRL-------MAGLELPDEGKIIVDGIDIT-NYGWERIELRKRIGIMHQEFSLPYY 349
Query: 342 SVVE 345
VE
Sbjct: 350 QTVE 353
>pir||E72314 ribose ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981493|gb|AAD36035.1|AE001758_13
(AE001758) ribose ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 523
Score = 92.1 bits (225), Expect = 9e-18
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 35/338 (10%)
Query: 8 NVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLV 67
N+ K F AV ++L+I GE L+G +G GK+T ++++AG+ GQI+++ K V
Sbjct: 17 NITKTFPGVIAVNNVTLQIYKGEVCALVGENGAGKSTLMKILAGVYPDYEGQIFLEGKEV 76
Query: 68 --ADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPL----KLRKVPKQEIDRRVR 121
+P + +E +A++ Q L P+++ +NI + + Q++ +
Sbjct: 77 RFRNPREA-----QENGIALIPQELDLVPNLSSAENIFLSREPVNEFGVIEYQKMFEQAS 131
Query: 122 EVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAE 181
++ LG+ K K +LS Q+Q VA+ +A+ K+ +MDEP S + + ++
Sbjct: 132 KLFSKLGVNIDPKTKVEDLSTSQQQMVAIAKALSLDAKIIIMDEPTSAIGKRETEQLFNI 191
Query: 182 LKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAG--- 238
++ L+ + G + IY++H E + DR+ VM G G +E + L + G
Sbjct: 192 IRSLKNE-GKSVIYISHRLEEIFEIADRVVVMRDGRKVGEGPIEEFDHDKLVRLMVGRSI 250
Query: 239 --FIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQF-------EVLEENNLIGK------ 283
F +G + R KLL D EVL L+G
Sbjct: 251 DQFFIKERATITDEIFRVEGIKLWSLDRKKLLVDDVSFYVRKGEVLGIYGLVGAGRTELL 310
Query: 284 EVIFGIRPEDIYDASF-----IRVEEPENIVRAKVDIV 316
E IFG P F I++ P + V+ + +V
Sbjct: 311 EAIFGAHPGRTEGKVFIGGKEIKIHSPRDAVKNGIGLV 348
Score = 72.2 bits (174), Expect = 9e-12
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 19/243 (7%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEP-TIGQIYI 62
V+ I +W V ++S ++ GE L + G G G+T L I G T G+++I
Sbjct: 268 VEGIKLWSLDRKKLLVDDVSFYVRKGEVLGIYGLVGAGRTELLEAIFGAHPGRTEGKVFI 327
Query: 63 DDKLVA------DPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRK---VPK 113
K + + GI + P++R A + ++ ++T+ ++ L +RK +
Sbjct: 328 GGKEIKIHSPRDAVKNGIGLVPEDRKTAGLILQMSVLHNITL-PSVVMKLIVRKFGLIDS 386
Query: 114 QEIDRRVREVAEMLGL-TELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDA 172
Q VR E L + T + LSGG +Q+V L + + +PKV L+DEP +D
Sbjct: 387 QLEKEIVRSFIEKLNIKTPSPYQIVENLSGGNQQKVVLAKWLAIKPKVLLLDEPTRGID- 445
Query: 173 KLRVKMRAELKKLQRQL---GVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYN 229
V ++E+ KL ++ G+ + V+ + E + M DRI VM+ G +EV
Sbjct: 446 ---VNAKSEIYKLISEMAVSGMGVVMVSSELPEILAMSDRILVMSEGRKTAEFLREEVTE 502
Query: 230 KPL 232
+ L
Sbjct: 503 EDL 505
>sp|P77509|YPHE_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YPHE
>gi|7445633|pir||B65032 hypothetical protein b2547 -
Escherichia coli (strain K-12)
>gi|1788897|gb|AAC75600.1| (AE000340) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|1799964|dbj|BAA16449.1| (D90884)
GALACTOSIDE TRANSPORT ATP-BINDING PROTEIN MGLA.
[Escherichia coli] >gi|1799972|dbj|BAA16456.1| (D90885)
GALACTOSIDE TRANSPORT ATP-BINDING PROTEIN MGLA.
[Escherichia coli]
Length = 503
Score = 89.3 bits (218), Expect = 6e-17
Identities = 84/332 (25%), Positives = 147/332 (43%), Gaps = 23/332 (6%)
Query: 11 KKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADP 70
K++ A+ ++ + GE LLG +G GK+T +RM+ G E P G I+I + +
Sbjct: 18 KRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGD 77
Query: 71 EKGIFVPPKERDVAMVFQSYALYPHMTVYDNIA---FPLKLRKVPKQEIDRRVREVAEML 127
E + E V V+Q +L +TV +N+ +P + + ++ + + + L
Sbjct: 78 EATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQAL 137
Query: 128 GLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQR 187
G+ ++ LS Q+Q V + R + P+V ++DEP S+L A V++ K
Sbjct: 138 GVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSL-ASAEVELVISAVKKMS 196
Query: 188 QLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSPPMNF 247
LGV IYV+H E + VM G QV + N + V+ +G ++
Sbjct: 197 ALGVAVIYVSHRMEEIRRIASCATVMRDG---QVAGDVMLENTSTHHIVSLMLGRDHVDI 253
Query: 248 LTATVSSDGFLDFGEFRLKLLK------DQFEVLEENNLIGKEVIFGIRPEDIYDASFIR 301
A V+ +D ++ L+ D L ++G + G ++ A +
Sbjct: 254 --APVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKA-IVG 310
Query: 302 VEEPENIVRAKVDIVENLGGEKIVHLRLGDII 333
+EE E + +IV N GEKI GD++
Sbjct: 311 LEEYE-----QGEIVIN--GEKITRPDYGDML 335
>pir||B64551 oligopeptide ABC transporter, ATP-binding protein - Helicobacter
pylori (strain 26695) >gi|2313342|gb|AAD07317.1|
(AE000544) oligopeptide ABC transporter, ATP-binding
protein (oppD) [Helicobacter pylori 26695]
Length = 516
Score = 88.2 bits (215), Expect = 1e-16
Identities = 73/353 (20%), Positives = 156/353 (43%), Gaps = 10/353 (2%)
Query: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLE---EPTI 57
M E+K +N +++ +++ + E + ++G SG GK++ +I L +P
Sbjct: 1 MLEIKNLNC--VLNAHFSLQNINISLNPSERVAIVGESGSGKSSIANIIMRLNPRFKPHN 58
Query: 58 GQIYIDDKLVADPEKGIFVPPKERDVAMVFQS--YALYPHMTVYDNI--AFPLKLRKVPK 113
G++ + + + + +A + Q +L P + + A+ L + K
Sbjct: 59 GEVLFETTNLLKESEEFMQHLRGNAIAYIAQDPLSSLNPLHKIGKQMSEAYFLHYKNASK 118
Query: 114 QEIDRRVREVAEMLGLTE-LLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDA 172
+ +V + + L E L R P ELSGGQRQRV + II PK+ + DEP + LDA
Sbjct: 119 TLLKEQVLNAMKQVQLDEKFLDRYPYELSGGQRQRVCIAMGIINAPKLLICDEPTTALDA 178
Query: 173 KLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPL 232
+++ ++ K+L + + ++++HD + DR+ V+ +GE+ + +++N P
Sbjct: 179 QIQNQILDLPKQLSAEKNIALLFISHDLKAVKRLADRVYVLKKGEIVETNLTKDLFNDPK 238
Query: 233 NTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
+ + I + + + L+ +F + L+ +F + V F ++ +
Sbjct: 239 HEYSKLLIQASNLPAKNLKALDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVNFSLKAK 298
Query: 293 DIYDASFIRVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVE 345
+ ++ + + N G EKI+ +G + A P +++
Sbjct: 299 ENIGIIGESGSGKSSLALGLLKLALNSGEEKILGQSVGSLNSKAFKPYRKILQ 351
Score = 85.8 bits (209), Expect = 7e-16
Identities = 67/234 (28%), Positives = 118/234 (49%), Gaps = 17/234 (7%)
Query: 19 VKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGL-----EEPTIGQIYIDDKLVADPEKG 73
+ ++ +K E + ++G SG GK++ + L EE +GQ V
Sbjct: 288 IASVNFSLKAKENIGIIGESGSGKSSLALGLLKLALNSGEEKILGQS------VGSLNSK 341
Query: 74 IFVPPKERDVAMVFQS-YA-LYPHMTVYDNIAFPLKLR--KVPKQEIDRRVREVAEMLGL 129
F P + + + MVFQ YA L P +++ + L+ K K+E + E + L
Sbjct: 342 AFKPYR-KILQMVFQDPYASLNPRLSIQSILTEALRFAYPKASKEEWHHLAKLCLEEVCL 400
Query: 130 T-ELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQ 188
+ ELL ELSGG+RQRVA+ RAI +PK+ L+DEP S LD ++ + L LQ +
Sbjct: 401 SHELLNSYAYELSGGERQRVAIARAIALKPKIILLDEPTSALDKSIQKSVLELLLDLQEK 460
Query: 189 LGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGS 242
++ ++++HD D++ V++ G++ ++ T EV++ P + + + S
Sbjct: 461 QDLSYLFISHDLDVIKAFCDKVLVISEGKVVEMNTIKEVFDNPKHAYTKRLLES 514
>pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001500|dbj|BAA10125.1| (D64000) high-affinity
branched-chain amino acid transport ATP-binding protein
[Synechocystis sp.]
Length = 373
Score = 85.4 bits (208), Expect = 9e-16
Identities = 83/335 (24%), Positives = 146/335 (42%), Gaps = 44/335 (13%)
Query: 13 FGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVAD-PE 71
F F A+ L+ + GE V++GP+G GKTT L +I G +PT G++ K + PE
Sbjct: 15 FDGFRALNHLTFSMNPGELRVIIGPNGAGKTTFLDVITGKVQPTEGRVLFQGKDIRKIPE 74
Query: 72 KGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEI--------DRRVREV 123
I V FQ+ +Y ++TV +N+ + +K + R V +
Sbjct: 75 YRI----ARLGVGRKFQTPRVYLNLTVAENLDLAVNRKKSVWGTLMGQATGAEQRSVGGL 130
Query: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
E +GLT LS G++QR+ +G + + P + L+DEP++ L + + L
Sbjct: 131 LETIGLTPKAHLAAALLSHGEKQRLEIGMLVAQSPTLLLVDEPVAGLTDEETENVGDLLL 190
Query: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
L + I + HD + ++ V+++G + G D++ N P + ++G
Sbjct: 191 ALAESHSI--IVIEHDMEFVRQIARKVTVLHQGSVLCEGNMDQIQNDP--KVIEVYLGEA 246
Query: 244 P---------MNFLTATVSSDGFLDFGEFRLKL--LKDQF-----------EVLEENNLI 281
P + + A ++DG + E + L L F + L++ L
Sbjct: 247 PSLSPQQFKILRTVAAVAAADGKISETEMAIILDNLSQVFKGSGSDPQHLRQELQDYLLQ 306
Query: 282 GKEVIFGIRPEDIYDASFIRVEEPENIVRAKVDIV 316
G EV F E+I + E+ E ++R +IV
Sbjct: 307 GVEVDFANLTEEI-----PKQEDRELVLRLSQEIV 336
>gb|AAC04781.1| (AF036920) sugar transport ATP-binding protein homolog [Rhizobium
tropici]
Length = 508
Score = 82.7 bits (201), Expect = 6e-15
Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 36/323 (11%)
Query: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
V+++++ K FG + + ++ G L+G +G GK+T +R++AG+ + T G+I +
Sbjct: 5 VEMVSINKSFGATKVLSNVQFSLERGSVHALMGENGAGKSTLMRILAGVYQQTAGRIRLR 64
Query: 64 DKLVADPEKGIFVPPKE---RDVAMVFQSYALYPHMTVYDNIAFPLKLRK----VPKQEI 116
E+ F PKE V+ VFQ + L P++TV +N+ + R+ + E+
Sbjct: 65 G------EEVTFRSPKEARLAGVSTVFQEFTLIPNLTVAENMFLGHEPRRADGSIDTAEV 118
Query: 117 DRRVR----EVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDA 172
R R +V L T +++ L+ Q+Q V + + + VF+ DEP + L++
Sbjct: 119 VERSRKLLADVFPQLDATAIVE----TLTVAQQQAVEIAKGLTSNADVFIFDEPTAALNS 174
Query: 173 KLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPL 232
+ ++ L+ Q +Y++H E + D I VM G + ++ +N L
Sbjct: 175 TDVAHLFKVIRDLKAQ-NKAVVYISHRMNEVFELCDTITVMKDGAWVKTARAED-FN--L 230
Query: 233 NTFVAGFIGSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPE 292
T VA +G +F + G L+L N G V F +R
Sbjct: 231 QTLVATMVGRELQSFFPPRAQAIGSAMLVVAGLRL-----------NDHGPPVGFSVRTG 279
Query: 293 DIYDASFIRVEEPENIVRAKVDI 315
+I + + + I+RA V +
Sbjct: 280 EIIGLAGLEGQGQREIMRAVVGV 302
>pir||B72759 probable ABC transporter ATP-binding protein APE0063 - Aeropyrum
pernix (strain K1) >gi|5103451|dbj|BAA78972.1|
(AP000058) 492aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 492
Score = 81.9 bits (199), Expect = 1e-14
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 13/309 (4%)
Query: 14 GDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLVADPEKG 73
G A+K ++ G LLG +G GKTT L+ I G+ +P G+I +D + G
Sbjct: 16 GGVHALKGVTASFPAGVVTALLGENGAGKTTLLKAIMGVVKPRKGRILVDGYELRPKGPG 75
Query: 74 IFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKL--RKVPKQEIDRRVREVAEMLGLTE 131
+ M Q+ +YP + Y+++A L + RK ++ + E +E LGL
Sbjct: 76 ---DSLRSGIYMASQNPPVYPGIKAYEDLAVTLMVAGRKAGLRQARTMLAEASEALGLNI 132
Query: 132 LLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGV 191
R E+ +RQR+ + +A+ + L+DEP ++L + +M +L G
Sbjct: 133 DPDRYLGEMGFSERQRLEVIKALALGSRAVLLDEPTTHLTPEEAARMLEAAGRLAAS-GA 191
Query: 192 TTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP--PMNFLT 249
+ VTH EAM DR+ ++ +G G P + + + G + +P P F
Sbjct: 192 AVLLVTHRIGEAMEHADRLVILRKGVKVYEGPPPS-STEEVAKLMFGEVLAPREPKTFTA 250
Query: 250 ATVSSDGFLDFGEFRL--KLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASF-IRVEEPE 306
AT + L L +L + EV + ++G + G E++++ +R
Sbjct: 251 ATSTGRPVLSVDRVSLPPRLRMARLEV-RQGEVVGVAGVAGNGQEELFEVIVGLRKPAKG 309
Query: 307 NIVRAKVDI 315
I+ A VD+
Sbjct: 310 RILIAGVDV 318
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.396
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131853812
Number of Sequences: 2977
Number of extensions: 5484083
Number of successful extensions: 24841
Number of sequences better than 1.0e-10: 2151
Number of HSP's better than 0.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 1513
Number of HSP's that attempted gapping in prelim test: 20335
Number of HSP's gapped (non-prelim): 2642
length of query: 371
length of database: 189,106,746
effective HSP length: 57
effective length of query: 314
effective length of database: 154,992,987
effective search space: 48667797918
effective search space used: 48667797918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)