BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0160 (PAB0160) DE:Hypothetical protein
(237 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75214 hypothetical protein PAB0160 - Pyrococcus abyssi (st... 460 e-129
pir||D71450 hypothetical protein PH0259 - Pyrococcus horikoshii ... 346 1e-94
sp|Q58343|Y933_METJA HYPOTHETICAL PROTEIN MJ0933 >gi|2128585|pir... 148 4e-35
gi|11498313 conserved hypothetical protein [Archaeoglobus fulgid... 143 1e-33
pir||E69079 conserved hypothetical protein MTH1592 - Methanobact... 133 2e-30
gb|AAG20004.1| (AE005081) Vng1782c [Halobacterium sp. NRC-1] 126 2e-28
emb|CAC11660.1| (AL445064) conserved hypothetical protein [Therm... 119 3e-26
dbj|BAB05137.1| (AP001512) unknown conserved protein in others [... 104 8e-22
sp|P73555|Y875_SYNY3 HYPOTHETICAL 27.2 KD PROTEIN SLL0875 >gi|74... 94 1e-18
gb|AAD30574.1|AC007260_5 (AC007260) lcl|prt_seq No definition li... 84 2e-15
gi|8922783 hypothetical protein FLJ10936 [Homo sapiens] >gi|7023... 73 2e-12
gi|11435467 G protein-coupled receptor 49 [Homo sapiens] 73 2e-12
dbj|BAB07977.1| (AP002524) hypothetical protein~similar to Droso... 70 2e-11
>pir||B75214 hypothetical protein PAB0160 - Pyrococcus abyssi (strain Orsay)
>gi|5457670|emb|CAB49161.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 237
Score = 460 bits (1170), Expect = e-129
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MIAQGMSMLLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLIL 60
MIAQGMSMLLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLIL
Sbjct: 1 MIAQGMSMLLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLIL 60
Query: 61 GTIATKLKWKEKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIAT 120
GTIATKLKWKEKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIAT
Sbjct: 61 GTIATKLKWKEKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIAT 120
Query: 121 ANADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDN 180
ANADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDN
Sbjct: 121 ANADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDN 180
Query: 181 KVPMLFSVTLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFLLLE 237
KVPMLFSVTLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFLLLE
Sbjct: 181 KVPMLFSVTLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFLLLE 237
>pir||D71450 hypothetical protein PH0259 - Pyrococcus horikoshii
>gi|3256648|dbj|BAA29331.1| (AP000001) 243aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 243
Score = 346 bits (878), Expect = 1e-94
Identities = 165/239 (69%), Positives = 205/239 (85%), Gaps = 3/239 (1%)
Query: 1 MIAQGMSM---LLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTF 57
M++QG+ M L ++ +P LGYLAY+ KALD KGSL AI LGY I+ILGGY+PF ALLTF
Sbjct: 4 MVSQGIGMEGLLAIIVIPFLGYLAYKVKALDKKGSLIAILLGYAIIILGGYLPFLALLTF 63
Query: 58 LILGTIATKLKWKEKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSA 117
LI GT+AT++KW EK ALG+NED RS+GNVLGNGL+PLLF++LE L ++DWGWAGVFSA
Sbjct: 64 LIAGTLATRIKWNEKNALGLNEDVYRSVGNVLGNGLAPLLFLILEVLAEKDWGWAGVFSA 123
Query: 118 IATANADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLV 177
IATANADTLASEIGK FG+NPI+IT FRRAKVGESGAVS VGE+VAL+G+ +I + +
Sbjct: 124 IATANADTLASEIGKAFGKNPIMITTFRRAKVGESGAVSLVGEIVALLGALMIGIFAMFS 183
Query: 178 SDNKVPMLFSVTLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFLLL 236
S NK ML SVT+AGF+G+N+DSLVGATLE++GY+DNNGTNF+AT +GG+IGIL+FL++
Sbjct: 184 SYNKFEMLLSVTIAGFLGSNIDSLVGATLERRGYLDNNGTNFVATLLGGVIGILMFLIV 242
>sp|Q58343|Y933_METJA HYPOTHETICAL PROTEIN MJ0933 >gi|2128585|pir||E64416 hypothetical
protein MJ0933 - Methanococcus jannaschii
>gi|1591604|gb|AAB98935.1| (U67536) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 238
Score = 148 bits (371), Expect = 4e-35
Identities = 84/226 (37%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 11 MLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKLKWK 70
+L + +L + +++ LD +G + + +G+ ++ G+ LL+F ILG + +++ +
Sbjct: 16 ILIICVLALMIKKSRCLDNEGVIGSSIMGFILLYFCGFKYLILLLSFFILGVLVSRVGLE 75
Query: 71 EKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIATANADTLASEI 130
+KKA ++E +CRS+ NVL NGL P+LF +L A+ +W G S+IA A +DT +SE+
Sbjct: 76 KKKAKKMDE-TCRSLKNVLANGLIPILFAIL-AIFGFNWALIGYISSIAAATSDTFSSEL 133
Query: 131 GKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDNKVPMLFSVTL 190
G + P LIT F + G GA++ G L ++G+FLI L L+ + + ++ T
Sbjct: 134 GILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGLFGYLLFGD-IKIVLCGTA 192
Query: 191 AGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFLLL 236
G G DSLVGA E+KG ++N N IAT VGGIIG+LI+ L
Sbjct: 193 GGIAGNLADSLVGALFERKGILNNEHVNLIATIVGGIIGVLIYCTL 238
>gi|11498313 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483043|pir||B69338 conserved hypothetical protein
AF0706 - Archaeoglobus fulgidus
>gi|2649910|gb|AAB90535.1| (AE001056) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 403
Score = 143 bits (358), Expect = 1e-33
Identities = 91/220 (41%), Positives = 124/220 (56%), Gaps = 5/220 (2%)
Query: 20 LAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKLKWKEKKALGVNE 79
LA AK D G ++A +G +++ F +L F LG+ TK K+ K G+ E
Sbjct: 185 LALYAKVADESGLMSATIVGTTLILFADIRFFAVILLFYALGSAITKYKYSVKLERGIAE 244
Query: 80 DS--CRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVF-SAIATANADTLASEIGKVFGR 136
+ R NV GN L+PL F + + V D +A F +A+A A ADT+ASEIGK
Sbjct: 245 QAGGARGYANVFGNSLAPLFFAV-QFGVSGDAIFAAAFVAAVAAALADTMASEIGKA-EE 302
Query: 137 NPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDNKVPMLFSVTLAGFIGA 196
LITNF R + G SG +S GE AL G + AL+S L+ +L VTL+ F G
Sbjct: 303 KVYLITNFSRVEPGTSGGISVKGEFAALFGCIVTALLSLLLGIIGFDVLLPVTLSAFAGV 362
Query: 197 NVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFLLL 236
++DSL+GATLEKKGY+ N+ NF+ T GII +L+ L L
Sbjct: 363 HIDSLLGATLEKKGYLTNSAVNFLGTLSAGIICVLLLLPL 402
>pir||E69079 conserved hypothetical protein MTH1592 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622715|gb|AAB86065.1| (AE000918) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 227
Score = 133 bits (332), Expect = 2e-30
Identities = 81/224 (36%), Positives = 127/224 (56%), Gaps = 8/224 (3%)
Query: 11 MLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKLKWK 70
+L +G+L Y ALD+ GSL I +G I++ G+ + FL+LG ++TK + +
Sbjct: 9 VLLCVFIGFLTYYRGALDVWGSLFMILMGLLIILSAGFNWLLLIFIFLVLGLLSTKYRHE 68
Query: 71 EKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIATANADTLASEI 130
KK LGV E + RS NV+ NG+ P + + A D G ++ATA ADT+ASEI
Sbjct: 69 YKKELGVFEGT-RSAKNVISNGIVPFI---MAAFGYYDGFVGGFIGSVATATADTMASEI 124
Query: 131 GKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTL--VSDNKVPMLFSV 188
G + + P LIT +R + G G +SS+G + G+ +I L + L V + + +
Sbjct: 125 GVL--QTPRLITTLKRVEPGTDGGISSLGTAAGIAGAGIIGLSAFLLGVCPDPLKSMKVA 182
Query: 189 TLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILI 232
+AG +G +DSL+GA LE++ Y+ N N +AT G +IGI++
Sbjct: 183 VIAGTVGCFMDSLLGAVLERRKYLTNEHVNLLATVTGAVIGIIL 226
>gb|AAG20004.1| (AE005081) Vng1782c [Halobacterium sp. NRC-1]
Length = 324
Score = 126 bits (314), Expect = 2e-28
Identities = 87/236 (36%), Positives = 129/236 (53%), Gaps = 10/236 (4%)
Query: 2 IAQGMSMLLMLAMPL-LGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLIL 60
+A +L+ LA+ G+++ A + G L +FLG V+LGGY F L+ F +
Sbjct: 81 VAAWERVLVALAVTTAFGWVSRALGATSIAGMLTGVFLGLLAVVLGGYGWFVVLVAFFAV 140
Query: 61 GTIATKLKWKEKKALGVNE--DSCRSIGNVLGNGLSPLLFVMLEA----LVKRDWGWAGV 114
G++ATK K++ K GV E D R NVLGN + L+ ++L A + D +
Sbjct: 141 GSLATKFKYELKADRGVAEPNDGARGTANVLGNSAAALIALVLYAAHAHVPFADTAFLFA 200
Query: 115 FS-AIATANADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALI 173
++ ++ATA ADTL+SE+G +F P L+T F R G GAV+ GEL +VG+ +IA++
Sbjct: 201 YAGSVATALADTLSSEVGGLFD-TPRLVTTFERVDPGTDGAVTWQGELAGVVGATIIAVL 259
Query: 174 STLVSDNKVPMLFSVTLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIG 229
S V + V AG G DSL GAT+E + + N G NF+AT G +G
Sbjct: 260 SVAVFGVTLRGGGVVVAAGVAGMTADSLAGATIEGR-VLTNQGVNFLATLTGAAVG 314
>emb|CAC11660.1| (AL445064) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 236
Score = 119 bits (295), Expect = 3e-26
Identities = 74/233 (31%), Positives = 128/233 (54%), Gaps = 7/233 (3%)
Query: 8 MLLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKL 67
+L +L + +L L+ + + LDLKGS+AA+F+G + +G +L F+ +ATK
Sbjct: 5 VLTLLILAILFVLSLKLRVLDLKGSVAALFIGAIVSFIGSIYWLILMLIFVASSFLATKA 64
Query: 68 KWKEKKALGVNEDSC--RSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIATA--NA 123
+ +K + V E R I NV L ++ ++ + + AI+ A N+
Sbjct: 65 FFSKKVKMKVQEGEHGERRISNVTYAALVGIMITLIYGIYPHMHNYFFELFAISFAVINS 124
Query: 124 DTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDN--K 181
DT ASEIG V + +IT F+R + G +G VS GEL A++G F+IA+ ++ + +
Sbjct: 125 DTFASEIG-VIDQRVYMITTFKRVRPGVNGGVSLTGELAAILGGFIIAMFYSIFAYHGFN 183
Query: 182 VPMLFSVTLAGFIGANVDSLVGATLEKKGYVDNNGTNFIATFVGGIIGILIFL 234
VP + VT AGF+G +DS++GA E +G ++ NF+++F+ + +F+
Sbjct: 184 VPRIAEVTAAGFVGCQIDSILGALFENRGKLNKGQVNFLSSFLTVMASAAMFI 236
>dbj|BAB05137.1| (AP001512) unknown conserved protein in others [Bacillus
halodurans]
Length = 262
Score = 104 bits (258), Expect = 8e-22
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 30/261 (11%)
Query: 6 MSMLLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIAT 65
M +L +L + LL AY+ K L L G+++A +G I G+ L F +
Sbjct: 1 MIVLALLGVLLLSVYAYKTKKLTLSGAISAFVVGALISFGLGFKGLLLLAIFFFTSGFWS 60
Query: 66 KLKWKEKKALGVNEDSCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVFSAIATANADT 125
+ + K+ + S R VL NG + +L ++++ G +++A ANADT
Sbjct: 61 RFYQERKENEITAKGSTRDGWQVLANGGFAAICALLFSILQDPIYICGFVASLAAANADT 120
Query: 126 LASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLV----SDNK 181
ASE+G + R PI I ++ G SGAVS++G A GSF+I ++S S
Sbjct: 121 WASEVGPLAKRRPIHIIKWKPVDAGTSGAVSAIGTAAAFAGSFIIVVVSIFFWWSSSFAS 180
Query: 182 VPMLFSVTLAGFIGANVDSLVGAT-----------------------LEKK---GYVDNN 215
+LFS+TLAGF+G D+LVGAT EKK +++N+
Sbjct: 181 HHLLFSLTLAGFLGNLFDTLVGATGQVLYQCPRCGLETERKIHCNGPTEKKYGLRFLNND 240
Query: 216 GTNFIATFVGGIIGILIFLLL 236
N I T G + GI+ L+L
Sbjct: 241 TVNAICTGTGALFGIVAGLIL 261
>sp|P73555|Y875_SYNY3 HYPOTHETICAL 27.2 KD PROTEIN SLL0875 >gi|7448501|pir||S77261
hypothetical protein sll0875 - Synechocystis sp. (strain
PCC 6803) >gi|1652675|dbj|BAA17595.1| (D90907)
hypothetical protein [Synechocystis sp.]
Length = 258
Score = 94.0 bits (230), Expect = 1e-18
Identities = 64/198 (32%), Positives = 99/198 (49%), Gaps = 8/198 (4%)
Query: 41 GIVILG--GYVPFFALLTFLILGTIATKLKWKEKKALGVNEDSCRSIG--NVLGNGLSPL 96
G++I G+ + +L + +G+ T++ KEK+A G+ E G NV G+ L+
Sbjct: 52 GVIIWAALGWRGYLVVLAYFFVGSAVTRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAA 111
Query: 97 LFVMLEALVKRDWG-WA--GVFSAIATANADTLASEIGKVFGRNPILITNFRRAKVGESG 153
L + A W W G ++ +T +DT ASE+GK +G+N LIT + G G
Sbjct: 112 LCALAIAFGPEPWQLWLALGYVASFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEG 171
Query: 154 AVSSVGELVALVGSFLIALISTLVSDNKVPMLFSVTLAGFIGANVDSLVGATLEKK-GYV 212
AVS G L +A++ V + TLA FI N++S++GATL+ K ++
Sbjct: 172 AVSVEGTLAGFAAGLALAVLGYGVGLISFGGIIFSTLAAFIATNLESVIGATLQNKWPWL 231
Query: 213 DNNGTNFIATFVGGIIGI 230
N N I TF+G I I
Sbjct: 232 TNEVVNGINTFLGAAIAI 249
>gb|AAD30574.1|AC007260_5 (AC007260) lcl|prt_seq No definition line found [Arabidopsis
thaliana]
Length = 333
Score = 83.9 bits (204), Expect = 2e-15
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 8 MLLMLAMPLLGYLAYRAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKL 67
++ +L PLL L G AA LG G F + + ++GT ATK+
Sbjct: 95 LIFVLGSPLL------VTGLSASGIAAAFLLGTLTWRAYGSAGFLLVAAYFVIGTAATKV 148
Query: 68 KWKEKKALGVNED--SCRSIGNVLGNGLSPLLFVMLEALVKRDWGWAGVF-----SAIAT 120
K +K+A GV E R +V+G+ + + L ++ +F S+ T
Sbjct: 149 KMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCT 208
Query: 121 ANADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLVSDN 180
+DT++SEIGK +G+ L T F+ G GA+S G L L+ SF +A + +
Sbjct: 209 KVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLEGTLAGLLASFFLASVGCFLGQI 268
Query: 181 KVPMLFSVTLAGFIGANVDSLVGATLEKK---GYVDNNGTNFIATFVGGIIGILI 232
P LA I +S++GA+ + K +++N+ N I +G I+ IL+
Sbjct: 269 TPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNNDVVNVINISLGSIVAILM 323
>gi|8922783 hypothetical protein FLJ10936 [Homo sapiens]
>gi|7023297|dbj|BAA91918.1| (AK001798) unnamed protein
product [Homo sapiens]
Length = 298
Score = 73.4 bits (177), Expect = 2e-12
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 23 RAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKLKWKEKKALG--VNED 80
+ K+LD G+L + +G+ I+ + + F +LL F + + TK K + KK L E
Sbjct: 70 KKKSLDHSGALGGLVVGF-ILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEG 128
Query: 81 SCRSIGNVLGNGLSPLLFVMLEAL--------------VKRDWGWAGVFSAIATANADTL 126
R+ V NG P +L + W + +A+A + DT
Sbjct: 129 GQRNWVQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCLSLLAALACSAGDTW 188
Query: 127 ASEIGKVFGRN-PILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTL--------- 176
ASE+G V ++ P LIT + + VG +G V+ VG + +L+G + + L
Sbjct: 189 ASEVGPVLSKSSPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLIFVNDL 248
Query: 177 -VSDNKVPMLFSVTLAGFIGANVDSLVGATLEKKG 210
+S + P++ LAG +G+ VDS +GAT++ G
Sbjct: 249 DISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTG 283
>gi|11435467 G protein-coupled receptor 49 [Homo sapiens]
Length = 298
Score = 73.4 bits (177), Expect = 2e-12
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 23 RAKALDLKGSLAAIFLGYGIVILGGYVPFFALLTFLILGTIATKLKWKEKKALG--VNED 80
+ K+LD G+L + +G+ I+ + + F +LL F + + TK K + KK L E
Sbjct: 70 KKKSLDHSGALGGLVVGF-ILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEG 128
Query: 81 SCRSIGNVLGNGLSPLLFVMLEAL--------------VKRDWGWAGVFSAIATANADTL 126
R+ V NG P +L + W + +A+A + DT
Sbjct: 129 GQRNWVQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCLSLLAALACSAGDTW 188
Query: 127 ASEIGKVFGRN-PILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTL--------- 176
ASE+G V ++ P LIT + + VG +G V+ VG + +L+G + + L
Sbjct: 189 ASEVGPVLSKSSPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLIFVNDL 248
Query: 177 -VSDNKVPMLFSVTLAGFIGANVDSLVGATLEKKG 210
+S + P++ LAG +G+ VDS +GAT++ G
Sbjct: 249 DISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTG 283
>dbj|BAB07977.1| (AP002524) hypothetical protein~similar to Drosophila melanogaster
chromosome 3L, CG10171 gene product [Oryza sativa]
Length = 929
Score = 70.2 bits (169), Expect = 2e-11
Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 57/264 (21%)
Query: 21 AYRAKALDLKGSLAAIFLGYGIVI---LGGYVPFFALLTFLILGTIATKLKWKEKKALGV 77
A R K++D A+F+G ++ + GY LL F + T++ K K+AL
Sbjct: 570 AVRRKSVDS----TAVFVGVPAMVAHTVAGYRFAGMLLVFFFTASRMTRVGEKRKRALDP 625
Query: 78 N--EDSCRSIGNVLGNGLSPLLFVMLEALVK---------RDWGWA-----GVFSAIATA 121
+ E R+ VL N + V+L ALV R+ GV A
Sbjct: 626 DFKEGGQRNWKQVLSNSGIASVLVVLIALVTGGSDRCLDTRESSLVTALIGGVIGHYACC 685
Query: 122 NADTLASEIGKVFGRNPILITNFRRAKVGESGAVSSVGELVALVGSFLIALISTLV---- 177
N DT +SE+G + P +IT F+R + G +G V+ G L A F I L L+
Sbjct: 686 NGDTWSSELGILSKAEPRIITTFKRVRKGTNGGVTIDGLLAAAAAGFSIGLTFVLLGFLT 745
Query: 178 ----SD---NKVPMLFSVTLAGFIGANVDSLVGATLEKKGY------------------- 211
SD ++ ++ T AG G+ +DSL+GATL+ GY
Sbjct: 746 TQCSSDVFWRQLLVIPLATAAGLCGSLIDSLLGATLQYSGYCSLRKKVVGVDGPTVTRIS 805
Query: 212 ----VDNNGTNFIATFVGGIIGIL 231
+DNNG N ++ F+ +I L
Sbjct: 806 GRNILDNNGVNVVSVFLTTLITAL 829
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.324 0.143 0.408
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80228976
Number of Sequences: 2977
Number of extensions: 3217509
Number of successful extensions: 8594
Number of sequences better than 1.0e-10: 13
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8564
Number of HSP's gapped (non-prelim): 13
length of query: 237
length of database: 189,106,746
effective HSP length: 54
effective length of query: 183
effective length of database: 156,788,448
effective search space: 28692285984
effective search space used: 28692285984
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (22.0 bits)
S2: 164 (68.3 bits)