BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0168 (PAB0168) DE:5'-ADENYLYLPHOSPHOSULFATE REDUCTASE
related protein
(632 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75215 5'-adenylylphosphosulfate reductase related protein ... 1305 0.0
pir||E71451 hypothetical protein PH0268 - Pyrococcus horikoshii ... 1108 0.0
sp|Q60377|Y066_METJA HYPOTHETICAL PROTEIN MJ0066 >gi|2128107|pir... 364 2e-99
sp|Q58383|Y973_METJA HYPOTHETICAL PROTEIN MJ0973 >gi|2128610|pir... 187 4e-46
pir||F72512 hypothetical protein APE2075 - Aeropyrum pernix (str... 99 1e-19
pir||D71018 hypothetical protein PH1441 - Pyrococcus horikoshii ... 92 2e-17
pir||G75114 hypothetical protein PAB1895 - Pyrococcus abyssi (st... 89 2e-16
>pir||B75215 5'-adenylylphosphosulfate reductase related protein PAB0168 -
Pyrococcus abyssi (strain Orsay)
>gi|5457678|emb|CAB49169.1| (AJ248283)
5'-ADENYLYLPHOSPHOSULFATE REDUCTASE related protein
[Pyrococcus abyssi]
Length = 632
Score = 1305 bits (3341), Expect = 0.0
Identities = 632/632 (100%), Positives = 632/632 (100%)
Query: 1 MRKKGPVVLGRFWIYWCEKCNVPLISEKCSVHGEDGVFKITLTPPGDVRFAFERDIELIR 60
MRKKGPVVLGRFWIYWCEKCNVPLISEKCSVHGEDGVFKITLTPPGDVRFAFERDIELIR
Sbjct: 1 MRKKGPVVLGRFWIYWCEKCNVPLISEKCSVHGEDGVFKITLTPPGDVRFAFERDIELIR 60
Query: 61 AVFLEHYGVDIKELMDGKIVLLNKIPGEDDSYEIIFDGFIFGIISFDPRSLKWRPGLKEE 120
AVFLEHYGVDIKELMDGKIVLLNKIPGEDDSYEIIFDGFIFGIISFDPRSLKWRPGLKEE
Sbjct: 61 AVFLEHYGVDIKELMDGKIVLLNKIPGEDDSYEIIFDGFIFGIISFDPRSLKWRPGLKEE 120
Query: 121 GARLLWEKFGKRMKKWVIIDRGAVEPVKNGANVLPVGIIEAEESIRRNDEVIVVSEDGEV 180
GARLLWEKFGKRMKKWVIIDRGAVEPVKNGANVLPVGIIEAEESIRRNDEVIVVSEDGEV
Sbjct: 121 GARLLWEKFGKRMKKWVIIDRGAVEPVKNGANVLPVGIIEAEESIRRNDEVIVVSEDGEV 180
Query: 181 VGVGIAKKDYEELINPSSRGTGIKMKRKAKGSGRRTNGKKAKIEDVIRANSQALEEKVKE 240
VGVGIAKKDYEELINPSSRGTGIKMKRKAKGSGRRTNGKKAKIEDVIRANSQALEEKVKE
Sbjct: 181 VGVGIAKKDYEELINPSSRGTGIKMKRKAKGSGRRTNGKKAKIEDVIRANSQALEEKVKE 240
Query: 241 AKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALEEFDEFTVFFNNTGIEFPETVEYVES 300
AKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALEEFDEFTVFFNNTGIEFPETVEYVES
Sbjct: 241 AKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALEEFDEFTVFFNNTGIEFPETVEYVES 300
Query: 301 LRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWCCKVTKLGPITLAIKRHFPQGVL 360
LRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWCCKVTKLGPITLAIKRHFPQGVL
Sbjct: 301 LRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWCCKVTKLGPITLAIKRHFPQGVL 360
Query: 361 MFVGQRKFESFKRYKQGRVWRNSWVPNEIGAAPIFHWTALEVWLYIFSRKLRYNPLYERG 420
MFVGQRKFESFKRYKQGRVWRNSWVPNEIGAAPIFHWTALEVWLYIFSRKLRYNPLYERG
Sbjct: 361 MFVGQRKFESFKRYKQGRVWRNSWVPNEIGAAPIFHWTALEVWLYIFSRKLRYNPLYERG 420
Query: 421 IDRIGCFLCPSQSLAEIERLKKEKPELWSKWEKELEKWRKKLNLPKEWIEYGFWRWRKLG 480
IDRIGCFLCPSQSLAEIERLKKEKPELWSKWEKELEKWRKKLNLPKEWIEYGFWRWRKLG
Sbjct: 421 IDRIGCFLCPSQSLAEIERLKKEKPELWSKWEKELEKWRKKLNLPKEWIEYGFWRWRKLG 480
Query: 481 KREVALAKDLGVEIPRERKWDVIEFSIEEEGESFIVRPSTRINLRRIREVAPILGEVEEG 540
KREVALAKDLGVEIPRERKWDVIEFSIEEEGESFIVRPSTRINLRRIREVAPILGEVEEG
Sbjct: 481 KREVALAKDLGVEIPRERKWDVIEFSIEEEGESFIVRPSTRINLRRIREVAPILGEVEEG 540
Query: 541 SNYLKAGKNLFDAEKNIIVSPSHEEAIASMFLLKRAYECVGCGVCVTSCPENAIFIDEKR 600
SNYLKAGKNLFDAEKNIIVSPSHEEAIASMFLLKRAYECVGCGVCVTSCPENAIFIDEKR
Sbjct: 541 SNYLKAGKNLFDAEKNIIVSPSHEEAIASMFLLKRAYECVGCGVCVTSCPENAIFIDEKR 600
Query: 601 KKAVVIAERCTHCRECMNSCPLVVIQGIDRIL 632
KKAVVIAERCTHCRECMNSCPLVVIQGIDRIL
Sbjct: 601 KKAVVIAERCTHCRECMNSCPLVVIQGIDRIL 632
>pir||E71451 hypothetical protein PH0268 - Pyrococcus horikoshii
>gi|3256657|dbj|BAA29340.1| (AP000001) 630aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 630
Score = 1108 bits (2835), Expect = 0.0
Identities = 514/632 (81%), Positives = 576/632 (90%), Gaps = 2/632 (0%)
Query: 1 MRKKGPVVLGRFWIYWCEKCNVPLISEKCSVHGEDGVFKITLTPPGDVRFAFERDIELIR 60
MRKKGPVVLG+FWIYWCEKCNVPLI + CS+HG+D VFKITLTPPGDVRFAF +DIELIR
Sbjct: 1 MRKKGPVVLGKFWIYWCEKCNVPLIGDTCSIHGKDSVFKITLTPPGDVRFAFPKDIELIR 60
Query: 61 AVFLEHYGVDIKELMDGKIVLLNKIPGEDDSYEIIFDGFIFGIISFDPRSLKWRPGLKEE 120
VF EHYGVD+ EL++GKIVLLNKIPGEDDSYEIIFDGFIFGIISF+PR LKW+PGLKEE
Sbjct: 61 EVFREHYGVDLGELLEGKIVLLNKIPGEDDSYEIIFDGFIFGIISFNPRKLKWKPGLKEE 120
Query: 121 GARLLWEKFGKRMKKWVIIDRGAVEPVKNGANVLPVGIIEAEESIRRNDEVIVVSEDGEV 180
GA+LLWEKFGK +KKWVIIDRGAVEPVKNGANVLPVG+IEAEESIRR DEVIVVSEDGEV
Sbjct: 121 GAKLLWEKFGKSLKKWVIIDRGAVEPVKNGANVLPVGVIEAEESIRRGDEVIVVSEDGEV 180
Query: 181 VGVGIAKKDYEELINPSSRGTGIKMKRKAKGSGRRTNGKKAKIEDVIRANSQALEEKVKE 240
VGVGIAKKDY ELINP +RGTG+KMKRK+KGSG+R NG+KA I+DVI+ANS LE+KV+E
Sbjct: 181 VGVGIAKKDYNELINPQARGTGVKMKRKSKGSGKRLNGRKATIKDVIKANSAELEKKVRE 240
Query: 241 AKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALEEFDEFTVFFNNTGIEFPETVEYVES 300
A+ FMR AEKFKLPV+VAFSGGKDSLAVLGLA+EEF+ FTVFFNNTGIEFPETVEYV
Sbjct: 241 ARNFMRSVAEKFKLPVAVAFSGGKDSLAVLGLAMEEFNNFTVFFNNTGIEFPETVEYVMK 300
Query: 301 LRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWCCKVTKLGPITLAIKRHFPQGVL 360
LR++ K + FI+ADAGDAFWRA+NIFSPPGMDYRWCCKVTKLGPITLAI++HFP GVL
Sbjct: 301 LREKY--KNLNFIIADAGDAFWRAINIFSPPGMDYRWCCKVTKLGPITLAIRKHFPNGVL 358
Query: 361 MFVGQRKFESFKRYKQGRVWRNSWVPNEIGAAPIFHWTALEVWLYIFSRKLRYNPLYERG 420
MFVGQRKFESFKRYKQGRVW+N WVPNEIGAAPIFHWTALEVWLYIFSR L YNPLYE+G
Sbjct: 359 MFVGQRKFESFKRYKQGRVWKNKWVPNEIGAAPIFHWTALEVWLYIFSRGLEYNPLYEKG 418
Query: 421 IDRIGCFLCPSQSLAEIERLKKEKPELWSKWEKELEKWRKKLNLPKEWIEYGFWRWRKLG 480
IDRIGCFLCPSQSLAEI+RLK+EKPELW KW +ELEKWRK+L LP+EWIEYGFWRWR++G
Sbjct: 419 IDRIGCFLCPSQSLAEIQRLKEEKPELWEKWYRELEKWRKRLGLPREWIEYGFWRWRRVG 478
Query: 481 KREVALAKDLGVEIPRERKWDVIEFSIEEEGESFIVRPSTRINLRRIREVAPILGEVEEG 540
+RE LAK+LGVEIP ER W+VI+F I+EE +IVRPST++NL RIREVAPILG VEEG
Sbjct: 479 RREKVLAKELGVEIPEERSWEVIKFDIKEEEGKYIVRPSTKLNLTRIREVAPILGNVEEG 538
Query: 541 SNYLKAGKNLFDAEKNIIVSPSHEEAIASMFLLKRAYECVGCGVCVTSCPENAIFIDEKR 600
NYLKAG+N+FD +KN+I+SPS EEA +S+ LLKRAYECVGCGVC+TSCPE AI +DEKR
Sbjct: 539 DNYLKAGENIFDKDKNVIISPSLEEAYSSVLLLKRAYECVGCGVCITSCPEEAIELDEKR 598
Query: 601 KKAVVIAERCTHCRECMNSCPLVVIQGIDRIL 632
KK VV E+CTHCRECMN CPLVVI+G+D IL
Sbjct: 599 KKIVVSLEKCTHCRECMNVCPLVVIKGVDNIL 630
>sp|Q60377|Y066_METJA HYPOTHETICAL PROTEIN MJ0066 >gi|2128107|pir||B64308 hypothetical
protein MJ0066 - Methanococcus jannaschii
>gi|1590856|gb|AAB98046.1| (U67464) sulfate adenylate
transferase, subunit 2 (cysD) [Methanococcus jannaschii]
Length = 480
Score = 364 bits (924), Expect = 2e-99
Identities = 192/476 (40%), Positives = 283/476 (59%), Gaps = 17/476 (3%)
Query: 9 LGRFWIYWCEKCNVPLISEKCSVHGEDGVFKITLTPPGDVRFAFERDIELIRAVFLEHYG 68
+G+ + WC+ CNVPL+ C V G ++ LTPPGD R F+ D++ I + E +G
Sbjct: 11 IGKIHLKWCKNCNVPLLGRVCEVCGSKAE-EVKLTPPGDPRLGFQYDMDFINKILEEEFG 69
Query: 69 VDIKELMDGKIVLLNKIPGEDDSYEIIFDGFIFGIISFDPRSLKWRPGLKEEGARLLWEK 128
K +++GKI+LLNKIPG +++YEII DG + +I FD KW+ LK GA+ L EK
Sbjct: 70 A--KNVLNGKIILLNKIPGNEEAYEIIVDGEVKYLIYFDEDKEKWKVKLKLNGAKDLMEK 127
Query: 129 FGKRMKKWVIIDRGAVEPVKNG-ANVLPVGIIEAEESIRRNDEVIVVSEDGEVVGVGIAK 187
KK + I VE +KN +VL GI+E + I D+VI+V E+ VVGVG+A
Sbjct: 128 GA--YKKIIKIKNDVVEFLKNRKGSVLRPGIVEFTDDIEEKDDVIIVDENDRVVGVGLAV 185
Query: 188 KDYEELINPSSRGTGIKMKRKAKGSGRRTNGK-----KAKIEDVIRANSQALEEKVKEAK 242
E++ N +G +K++ K + GK + + ++RAN ++ + A
Sbjct: 186 VSSEDIKN-MEKGKVVKVRFFIKDNEDYKPGKIYDNLEEAFDLMVRANEGVIDNYERNAI 244
Query: 243 EFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALEEFD-EFTVFFNNTGIEFPETVEYVESL 301
F++ T EK K PV VAFSGGKDSL L L L+ + V F +TG+EF ET++ VE +
Sbjct: 245 GFIKNTYEKIKKPVMVAFSGGKDSLVTLILTLKALGKDIDVVFIDTGLEFEETLKNVEDV 304
Query: 302 RKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWCCKVTKLGPITLAIKRHFPQGVLM 361
+ K +R G+ FW V + P DYRWC ++ KL P+ I+ ++ VL
Sbjct: 305 ERHYGIKIIRL----RGENFWEKVKEYGIPARDYRWCSEICKLEPLKKFIEENYEDDVLS 360
Query: 362 FVGQRKFESFKRYKQGRVWRNSWVPNEIGAAPIFHWTALEVWLYIFSRKLRYNPLYERGI 421
FVG RK+ESF R + R+ RN+++ +I A PIFHW++L VW+Y+ K YN LYE+G
Sbjct: 361 FVGIRKYESFNRATKKRIHRNTYIKKQINALPIFHWSSLHVWIYLLREKAPYNKLYEKGF 420
Query: 422 DRIGCFLCPSQSLAEIERLKKEKPELWSKWEKELEKWRKKLNLPKEWIEYGFWRWR 477
DRIGCF+CP+ + E+ ++K+E P+LW KWE L ++ +K NL + WI+ G WRW+
Sbjct: 421 DRIGCFMCPAMEMGEMNKIKREFPKLWEKWENVLREYAEKHNLGEGWIKKGLWRWK 476
>sp|Q58383|Y973_METJA HYPOTHETICAL PROTEIN MJ0973 >gi|2128610|pir||E64421 hypothetical
protein MJ0973 - Methanococcus jannaschii
>gi|1591636|gb|AAB98978.1| (U67540) 3-phosphoadenosine
5-phosphosulfate sulfotransferase (cysH) [Methanococcus
jannaschii]
Length = 411
Score = 187 bits (469), Expect = 4e-46
Identities = 130/451 (28%), Positives = 222/451 (48%), Gaps = 54/451 (11%)
Query: 47 DVRFAFERDIELIRAVFLEHYGVDIKELMDGKIVLLNKIPGEDDSYEIIFDGFIFGIISF 106
D +FA + +I+++ + +++ D+ ++L KI G D ++ +G GI+ F
Sbjct: 2 DDKFASKFEIDVLNKLLNKNFSYDLA-------IILKKIGGLDYRKKVFINGECIGILEF 54
Query: 107 DPRSLKWRPGLKEEGARLLWEKFGKRMKKWVIID-RGAVEPVKNG--ANVLPVGIIEAEE 163
D L W KF ++I + + ++P K +PV +IE E
Sbjct: 55 DLIDLDW--------------KFHPYASYYLIEEPKIKIKPTKRKLKGKKVPVDLIENAE 100
Query: 164 SIRR-NDEVIVVSEDGEVVGVGIAKKDYEELINPSSRGTGIKMKRKAKGSGRRTNGKKAK 222
++ N+ V E G VGV + K D ++ + + +K++ + K
Sbjct: 101 ELKDINENDYVGVEVGNYVGVAVKKGDTIKIKD-------LTLKKELRFE---------K 144
Query: 223 IEDVIRANSQALEEKVKEAKEFMRKTAEKFK---LPVSVAFSGGKDSLAVLGLALEEFDE 279
IED +R N +E+ K++ ++K E K ++ +FSGGKDS LA + D+
Sbjct: 145 IEDYLRKNKDRIEKLEKKSLSIIKKYYEMCKNKNYAINTSFSGGKDSSVSTLLANKVIDD 204
Query: 280 FTVFFNNTGIEFPETVEYVESLRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWCC 339
V F +TG+EF +T+++V+ K+ + +V G FW + P DYRWC
Sbjct: 205 LEVIFIDTGLEFKDTIDFVKKFAKKYDLN----LVVLKGKNFWEYLEKEGIPTKDYRWCN 260
Query: 340 KVTKLGPITLAIKRHFPQGVLMFVGQRKFESFKRYKQGRVWRNSWVPNEIGAAPIFHWTA 399
V KL P+ +K++ + V G R++ESF R K ++ ++ N+I PI W
Sbjct: 261 SVCKLEPLKEYLKKY--KRVYTIDGSRRYESFTREKLTYERKSGFIENQINIFPILDWRG 318
Query: 400 LEVWLYIFSRKLRYNPLYERGIDRIGCFLCPSQSLAEIERLKKEKPELWSKWEKELEKWR 459
+VW +I+ + YN LY++G +RIGC++CP+ AE R+K+ PEL++KW L
Sbjct: 319 TDVWSWIYLNDVIYNELYDKGFERIGCYMCPAALNAEFLRVKELYPELFNKWVDVL---- 374
Query: 460 KKLNLPKEWIEYGFWRWRKLGKREVALAKDL 490
K+ ++ I GFWRW++L + L K L
Sbjct: 375 KRFGYDEDEILRGFWRWKELPPKMKELKKIL 405
>pir||F72512 hypothetical protein APE2075 - Aeropyrum pernix (strain K1)
>gi|5105774|dbj|BAA81086.1| (AP000063) 464aa long
hypothetical protein [Aeropyrum pernix]
Length = 464
Score = 99.5 bits (244), Expect = 1e-19
Identities = 76/231 (32%), Positives = 110/231 (46%), Gaps = 8/231 (3%)
Query: 214 RRTNGKKAKIEDVIRANSQALEEKVKEAKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLA 273
RR + +E ++ AN L + + E +R E V V +SGGKDS A L LA
Sbjct: 200 RRVKPVRVDVESLVEANRSILRVLEQHSAEVLRMVGEDVDT-VIVPWSGGKDSTAALLLA 258
Query: 274 LEEF--DEFTVFFNNTGIEFPETVEYVESLRKELEPKGVRFIVADAGDAFWRAVNIFSPP 331
+E F D + +TGI+F E EYVE + L GV + A A + P
Sbjct: 259 VEAFGRDAVKAVYVDTGIDFIENAEYVEKVASTL---GVDLVYARADVDEGLLIEGMPMP 315
Query: 332 GMDYRWCCKVTKLGPITLAIKRHFPQGVLMFVGQRKFESFKRYKQGRVWRNSWVPNEIGA 391
+YRWC KL + A + ++ G R ES KR K+ + + + +
Sbjct: 316 DPEYRWCTG-RKLEALRQAFRTVSRGKTVVVTGDRDGESEKRGKRPPLRYDEKLGYPV-V 373
Query: 392 APIFHWTALEVWLYIFSRKLRYNPLYERGIDRIGCFLCPSQSLAEIERLKK 442
+P+ W+ V LYI S+ + NPLYE G RIGC+LC + EIE +K+
Sbjct: 374 SPLKLWSGGHVQLYILSKGIPLNPLYEAGFYRIGCYLCFALRSWEIEVMKR 424
>pir||D71018 hypothetical protein PH1441 - Pyrococcus horikoshii
>gi|3257865|dbj|BAA30548.1| (AP000006) 428aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 428
Score = 91.7 bits (224), Expect = 2e-17
Identities = 87/298 (29%), Positives = 136/298 (45%), Gaps = 28/298 (9%)
Query: 163 ESIRRNDEVIVVSEDGEVVGVGIAKKDYEELINPSSRGTGIKMKRKAKGSGRRTNGK--- 219
E R+N + ++ + GEV V + EE + K+ +K GR T K
Sbjct: 142 EGFRKNMKELLDVDPGEVALVLRKTMNIEEYYSGPH-----KIAEISKIIGRPTEVKWRI 196
Query: 220 ----KAKIEDVIRANSQALEEKVKEAKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALE 275
+E+ I+ N++ + + + F+ + +K + V +SGGKDS A L LA +
Sbjct: 197 PLLSDVSLEETIKRNTEYIRAFERASIAFLEQFKDKTAV---VPWSGGKDSTATLILASK 253
Query: 276 EFDEFTVFFNNTGIEFPETVEYVESLRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDY 335
FDE T + E P T EY+E + +L G+ I + V+ + P
Sbjct: 254 VFDEVTAVYVKMEYEMPLTDEYIEKVAHKL---GIDVIKVEVP----MPVHKYGLPTHSN 306
Query: 336 RWCCKVTKLGPITLAIKRHFPQGVLMFVGQRKFESFKR-YKQGRVWRNSWVPNEIGAAPI 394
RWC K+ K+ + +IK + ++ VG R ES KR K V R + + PI
Sbjct: 307 RWCTKM-KVDALYNSIKDL--RDPVLIVGDRDSESAKRRLKPPVVERKTTFGKVLEIMPI 363
Query: 395 FHWTALEVWLYIFSRKLRYNPLYERGIDRIGCFLCPSQSLAEIERLKKEK--PELWSK 450
W+ V LYI + +PLY +G R+GC +CPS + EI+ L K PE+ K
Sbjct: 364 KFWSGAMVQLYILMNGIELHPLYYQGFYRLGCTICPSLAQWEIDLLDKLNYLPEIMKK 421
>pir||G75114 hypothetical protein PAB1895 - Pyrococcus abyssi (strain Orsay)
>gi|5458143|emb|CAB49632.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 429
Score = 88.5 bits (216), Expect = 2e-16
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 219 KKAKIEDVIRANSQALEEKVKEAKEFMRKTAEKFKLPVSVAFSGGKDSLAVLGLALEEFD 278
++ ++ I+ N LE + + F+ + ++ + V +SGGKDS A L LA + FD
Sbjct: 202 EEVSLDKTIKVNMSYLEAFERASLAFLERFQDRNAI---VPWSGGKDSTAALILARKVFD 258
Query: 279 EFTVFFNNTGIEFPETVEYVESLRKELEPKGVRFIVADAGDAFWRAVNIFSPPGMDYRWC 338
+ T + E P T EYVE + +L V+ V ++ + P RWC
Sbjct: 259 DVTAVYVKMEYEMPLTDEYVEEVASKLNINLVKVEVP-------MPIHKYGLPTHSNRWC 311
Query: 339 CKVTKLGPITLAIKRHFPQGVLMFVGQRKFESFKR-YKQGRVWRNSWVPNEIGAAPIFHW 397
++ K+ + AIK + ++ VG R ES KR K V R + + P+ W
Sbjct: 312 TRM-KVEALYNAIKDI--ENPVLIVGDRDSESAKRRLKPPVVERETSFGRILEVMPLKFW 368
Query: 398 TALEVWLYIFSRKLRYNPLYERGIDRIGCFLCPSQSLAEIERLKK 442
+ V LYI + ++ +PLY +G R+GC +CPS + EI+ L+K
Sbjct: 369 SGAMVQLYILASGIKLHPLYYQGFYRLGCTVCPSLAQWEIDLLEK 413
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.435
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256184667
Number of Sequences: 2977
Number of extensions: 11739524
Number of successful extensions: 36837
Number of sequences better than 1.0e-10: 7
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 36814
Number of HSP's gapped (non-prelim): 7
length of query: 632
length of database: 189,106,746
effective HSP length: 53
effective length of query: 579
effective length of database: 157,386,935
effective search space: 91127035365
effective search space used: 91127035365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 168 (69.9 bits)