BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0174 (PAB0174) DE:Hypothetical protein
(488 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75216 hypothetical protein PAB0174 - Pyrococcus abyssi (st... 938 0.0
pir||H71452 hypothetical protein PH0279 - Pyrococcus horikoshii ... 875 0.0
sp|Q59027|YG33_METJA HYPOTHETICAL PROTEIN MJ1633 >gi|2128983|pir... 309 4e-83
gi|11499611 conserved hypothetical protein [Archaeoglobus fulgid... 302 5e-81
gb|AAG19401.1| (AE005034) Vng0983c [Halobacterium sp. NRC-1] 283 3e-75
gb|AAG19148.1| (AE005012) Vng0650c [Halobacterium sp. NRC-1] 230 2e-59
gb|AAG20850.1| (AE005153) Vng6183c [Halobacterium sp. NRC-1] 206 3e-52
pir||S74940 hypothetical protein sll0639 - Synechocystis sp. (st... 142 9e-33
gb|AAG18856.1| (AE004989) Vng0262c [Halobacterium sp. NRC-1] 116 5e-25
sp|Q58395|Y988_METJA HYPOTHETICAL PROTEIN MJ0988 >gi|2128620|pir... 83 6e-15
>pir||B75216 hypothetical protein PAB0174 - Pyrococcus abyssi (strain Orsay)
>gi|5457686|emb|CAB49177.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 488
Score = 938 bits (2397), Expect = 0.0
Identities = 488/488 (100%), Positives = 488/488 (100%)
Query: 1 MRVLVLGGGVLGRAIAEALMGEFDVTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAH 60
MRVLVLGGGVLGRAIAEALMGEFDVTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAH
Sbjct: 1 MRVLVLGGGVLGRAIAEALMGEFDVTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAH 60
Query: 61 IEKADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKV 120
IEKADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKV
Sbjct: 61 IEKADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKV 120
Query: 121 DYIINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKERTDSLLIVMHDNPDPDSMASA 180
DYIINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKERTDSLLIVMHDNPDPDSMASA
Sbjct: 121 DYIINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKERTDSLLIVMHDNPDPDSMASA 180
Query: 181 SALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVDAQ 240
SALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVDAQ
Sbjct: 181 SALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVDAQ 240
Query: 241 PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKALE 300
PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKALE
Sbjct: 241 PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKALE 300
Query: 301 IPITDTLATALFYGMYIDTKKFSKLSRVDISAIEFLTGKVNYELLDKIEFPDISTETAEI 360
IPITDTLATALFYGMYIDTKKFSKLSRVDISAIEFLTGKVNYELLDKIEFPDISTETAEI
Sbjct: 301 IPITDTLATALFYGMYIDTKKFSKLSRVDISAIEFLTGKVNYELLDKIEFPDISTETAEI 360
Query: 361 LARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART 420
LARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART
Sbjct: 361 LARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART 420
Query: 421 RDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKDKTSLLRLVEEAITEKFLE 480
RDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKDKTSLLRLVEEAITEKFLE
Sbjct: 421 RDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKDKTSLLRLVEEAITEKFLE 480
Query: 481 ALGMKEVT 488
ALGMKEVT
Sbjct: 481 ALGMKEVT 488
>pir||H71452 hypothetical protein PH0279 - Pyrococcus horikoshii
>gi|3256668|dbj|BAA29351.1| (AP000001) 488aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 488
Score = 875 bits (2237), Expect = 0.0
Identities = 442/488 (90%), Positives = 472/488 (96%)
Query: 1 MRVLVLGGGVLGRAIAEALMGEFDVTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAH 60
MRVLVLGGGVLGRAIAEAL+GEFDVTV+EKDSIRAQ LAESGLQVVQGDFSYTATLLKAH
Sbjct: 1 MRVLVLGGGVLGRAIAEALIGEFDVTVIEKDSIRAQALAESGLQVVQGDFSYTATLLKAH 60
Query: 61 IEKADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKV 120
IE+ADLIIITT D+QTIAKTLHV+KSNNKNAS L+ILPED+S+EDIES+LKEEYEM+VK+
Sbjct: 61 IERADLIIITTMDVQTIAKTLHVVKSNNKNASVLIILPEDRSVEDIESVLKEEYEMDVKI 120
Query: 121 DYIINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKERTDSLLIVMHDNPDPDSMASA 180
DY+INPRTAI+K VVET+EKIGEKKNA KLL KLNEIKE+TD+LLIVMHDNPDPD MASA
Sbjct: 121 DYVINPRTAIVKNVVETIEKIGEKKNALKLLNKLNEIKEKTDTLLIVMHDNPDPDCMASA 180
Query: 181 SALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVDAQ 240
SALAVIAQS+GL+ QIVYGGDITHHQNRAMVNVLGMEF+KV RGSYEIKR+ AIAIVDAQ
Sbjct: 181 SALAVIAQSIGLKTQIVYGGDITHHQNRAMVNVLGMEFRKVSRGSYEIKRHKAIAIVDAQ 240
Query: 241 PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKALE 300
PNGNITILD++DL ++EII+DHHQILQNLREKL PNCFVDIRTDVNATSSIM EYLKALE
Sbjct: 241 PNGNITILDEEDLNKIEIIIDHHQILQNLREKLPPNCFVDIRTDVNATSSIMAEYLKALE 300
Query: 301 IPITDTLATALFYGMYIDTKKFSKLSRVDISAIEFLTGKVNYELLDKIEFPDISTETAEI 360
IPIT+TLATALFYGMYIDTKKFSKLSRVDI+AIEFLTGKVNYELLDKIEFPDISTETAEI
Sbjct: 301 IPITETLATALFYGMYIDTKKFSKLSRVDINAIEFLTGKVNYELLDKIEFPDISTETAEI 360
Query: 361 LARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART 420
LARAILNRK+YKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART
Sbjct: 361 LARAILNRKIYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART 420
Query: 421 RDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKDKTSLLRLVEEAITEKFLE 480
RDVRVNIG VMKEAFGEIGSGGGH Q GGARIPLGIFKLA+DKTSLLRLVEEAITEKFLE
Sbjct: 421 RDVRVNIGNVMKEAFGEIGSGGGHPQAGGARIPLGIFKLARDKTSLLRLVEEAITEKFLE 480
Query: 481 ALGMKEVT 488
ALGMKEV+
Sbjct: 481 ALGMKEVS 488
>sp|Q59027|YG33_METJA HYPOTHETICAL PROTEIN MJ1633 >gi|2128983|pir||G64503 hypothetical
protein MJ1633 - Methanococcus jannaschii
>gi|1592223|gb|AAB99654.1| (U67603) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 478
Score = 309 bits (784), Expect = 4e-83
Identities = 187/498 (37%), Positives = 292/498 (58%), Gaps = 41/498 (8%)
Query: 3 VLVLGGGVLGRAIAEALMGEFDVTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAHIE 62
+ V+G G GR + + + +T+++K+ A L + G+ V+ GD + L KA IE
Sbjct: 5 ITVIGFGSFGRKVVNFIKNKEPITIIDKNIDDADDLVKEGVTVIVGDATQDEVLKKAKIE 64
Query: 63 KADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILK-EEYEMEVKVD 121
AD+++I T++ + N+ + V S + +I + E M + +D
Sbjct: 65 NADIVLILTNEPEV-----------NRRIAERVCELSPNSYKIARAIPRYPELYMGLNID 113
Query: 122 YIINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIK-----------ERTDSLLIVMHD 170
IIN + K + + VE K+ +L L E K E+ LLI+ H
Sbjct: 114 KIINILESGAKDIAKEVEDAKLKRKLMQLKSVLIEGKKRCMKLEKTEEEKKAPLLILTHI 173
Query: 171 NPDPDSMASASALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKR 230
NPDPD++ASA AL +A+ G+ I YGG+I + +N+AM+N+LG++ V ++
Sbjct: 174 NPDPDAIASAMALKTLAERWGVDSDIAYGGNIGYDENKAMINLLGIKLLNV--EDIDLDN 231
Query: 231 YDAIAIVDAQPNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSS 290
Y IA++D + + I +L ++II+DHH +L K ++D+R +V AT+S
Sbjct: 232 YCVIAVIDTSTSKQLPI----ELPNIDIIIDHHNNT-DLTAK-----YMDVRPEVGATAS 281
Query: 291 IMVEYLKALEIPITDTLATALFYGMYIDTKKFSK-LSRVDISAIEFLTGKVNYELLDKIE 349
I+ +YL L+I + LATALFYG+ DT F + S++D A +L ++ +L+ IE
Sbjct: 282 ILTQYLMELDIEPSRNLATALFYGIQSDTDYFKRETSKLDFEAAAYLQSYIDASILNMIE 341
Query: 350 FPDISTETAEILARAILNRKMYK-NVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFG 408
P+ISTE E+LA+A++NR++ K N+ ++ VG I+NRDA+ +AADFLL++EGI+T VFG
Sbjct: 342 NPEISTEVMEVLAKAVMNRRVVKGNIALAYVGEISNRDALPKAADFLLKMEGISTTFVFG 401
Query: 409 IVDDRIEISARTRDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKDKTSLLR 468
IV D I ISART+D+R+N+G+++ +AFG GGGH A+IPLGIFK DK +L +
Sbjct: 402 IVGDEIHISARTKDLRLNLGEILNKAFG----GGGHQTAAAAKIPLGIFKAVSDKEALRK 457
Query: 469 LVEEAITEKFLEALGMKE 486
LVEEAI K LE +G+KE
Sbjct: 458 LVEEAIRAKILEVIGIKE 475
>gi|11499611 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7448978|pir||D69503 conserved hypothetical protein
AF2029 - Archaeoglobus fulgidus
>gi|2648507|gb|AAB89226.1| (AE000963) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 473
Score = 302 bits (766), Expect = 5e-81
Identities = 187/488 (38%), Positives = 286/488 (58%), Gaps = 30/488 (6%)
Query: 4 LVLGGGVLGRAIAEALMGEFD-VTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAHIE 62
+V+G G + L V V+K + + L + G V D + + +E
Sbjct: 10 IVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLE 69
Query: 63 KADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKVDY 122
++IT SD + K L ++S + + + + K KEE+E E +
Sbjct: 70 GVSAVLITGSDDEFNLKILKALRSVSDVYAIVRVSSPKK---------KEEFE-EAGANL 119
Query: 123 IINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKE--RTDSLLIVMHDNPDPDSMASA 180
++ A+ +A ++ ++K+ K ++KL I E R L I HDNPDPDSM+SA
Sbjct: 120 VVLVADAVKQAFMDKIKKM----ETLKKIEKLKRIMESLRGKRLGIFTHDNPDPDSMSSA 175
Query: 181 SALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVDAQ 240
AL IA+ + I+Y G+I H +NRAMVN+L E + ++ YDA AIVD+
Sbjct: 176 YALREIAKQFDVIADILYYGEILHQKNRAMVNLL--EIPMIRAPEVDLSHYDAFAIVDSS 233
Query: 241 -PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKAL 299
P N +I D D + I++DHH + + E FVD+R DV AT++I+ EY+K L
Sbjct: 234 GPGVNNSIPPDID---ISIVIDHHPAEKVVAE------FVDLREDVGATATILTEYIKEL 284
Query: 300 EIPITDTLATALFYGMYIDTKKFSKLSRV-DISAIEFLTGKVNYELLDKIEFPDISTETA 358
+I + LATALF+G+ +T +F + +R D A FL V+ +L++KIE P ISTET
Sbjct: 285 KITPSKILATALFFGIKSETDEFKRNTRTADFLACAFLYPFVDQDLIEKIESPSISTETL 344
Query: 359 EILARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISA 418
+IL AI NR++Y + +IS GFI +RDA+ +AADFLL+LEGI+TV+VFG++ D + +SA
Sbjct: 345 DILGTAIKNRQVYSSFLISFAGFINDRDALPQAADFLLKLEGISTVVVFGVIKDTVYVSA 404
Query: 419 RTRDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKDKTSLLRLVEEAITEKF 478
R +DVR+++G+V++ AFG++GS GGHA GA+IPLGIF +K L +L+ EAIT++
Sbjct: 405 RNKDVRIHMGEVLRRAFGDVGSAGGHAHAAGAQIPLGIFGETNEKDLLAKLITEAITKRL 464
Query: 479 LEALGMKE 486
L A+GM++
Sbjct: 465 LSAVGMEQ 472
>gb|AAG19401.1| (AE005034) Vng0983c [Halobacterium sp. NRC-1]
Length = 484
Score = 283 bits (716), Expect = 3e-75
Identities = 169/489 (34%), Positives = 286/489 (57%), Gaps = 35/489 (7%)
Query: 5 VLGGGVLGRAIAEALMGEF-DVTVVEKDSIRAQTLAESGL--QVVQGDFSYTATLLKAHI 61
+LG G +G A+AE L+ DV +V+KD R + L + L QV A L I
Sbjct: 15 ILGCGSVGHAVAEELVERGKDVLIVDKDESRVEALRDQDLNAQVANVRDQEVAEL----I 70
Query: 62 EKADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKVD 121
+ D++++ SD+ + I++ N + + + + +++ E+ D
Sbjct: 71 DTRDVVLVMASDVDANEAAVENIRARNDDQFVVARASDPVTSDELT---------ELGAD 121
Query: 122 YIINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKERTDSLLIVMHDNPDPDSMASAS 181
+INP + I A + +E GE + +K Q + + I+ HD+PDPDS+A+A+
Sbjct: 122 VVINPSSVISDAALRALES-GELE--YKARQLADVVSGTESGFAIITHDSPDPDSIAAAA 178
Query: 182 ALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVDAQP 241
AL +A+ +G+ +I+Y GDI H +NRA VN+L +E +I YD IA+VD
Sbjct: 179 ALQAVARHLGIDAEILYFGDIGHQENRAFVNLLDIELTPY--SDVDIDNYDTIALVDPAK 236
Query: 242 NGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKALEI 301
G ++I D V+I +DH+++ E L+ F D+R V+ATS+I+ +Y++ ++
Sbjct: 237 AGAVSIDRD-----VDIFIDHYELED---ESLTAE-FADVRPSVSATSTILTKYIQEFDL 287
Query: 302 PITDTLATALFYGMYIDTKKFSK-LSRVDISAIEFLTGKVNYELLDKIEFPDISTETAEI 360
++ T+ATAL YG+ +T F + + D++A +L +++ L+++E P++S ET ++
Sbjct: 288 SVSQTVATALLYGIRAETLDFRRDTTPADLTAAAYLYPFADHDTLEQVESPNMSPETLDV 347
Query: 361 LARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISART 420
LA AI +R++ + ++SN GFI++RDA+++AA LL LEGITT VFGIVDD I + A++
Sbjct: 348 LAEAIASREVQGSHLVSNAGFISDRDALSQAASQLLNLEGITTTAVFGIVDDTIYLDAQS 407
Query: 421 RDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIF----KLAKDKTSLLRLVEEAITE 476
+D+R+NIG+V+ +AF +IG GH+ A IPLGIF +++ +LL L EEA+T
Sbjct: 408 KDIRLNIGRVLADAFVDIGDSAGHSTQASAEIPLGIFTGIETTEENRETLLDLTEEAVTR 467
Query: 477 KFLEALGMK 485
K +A+G++
Sbjct: 468 KLFDAMGVE 476
>gb|AAG19148.1| (AE005012) Vng0650c [Halobacterium sp. NRC-1]
Length = 477
Score = 230 bits (581), Expect = 2e-59
Identities = 150/483 (31%), Positives = 252/483 (52%), Gaps = 29/483 (6%)
Query: 4 LVLGGGVLGRAIAEALMGEF-DVTVVEKDSIRAQTLAESGLQVVQGDFSYTATLLKAHIE 62
LVLG G +G A+ +L ++ V + D R +L + D + A +
Sbjct: 5 LVLGCGTVGHAVIGSLADRRGELFVFDGDESRVDSLRNESVAAEVRDVTDPAAITLPD-R 63
Query: 63 KADLIIITTSDIQTIAKTLHVIKSNNKNASTLVILPEDKSIEDIESILKEEYEMEVKVDY 122
D++++ + + +A +V L D + +D + ++ D
Sbjct: 64 SVDMVVVAGERADRNRLAAIAADAAHPDAGLVVYLGFDATPKD-------RHRIDSVADR 116
Query: 123 IINPRTAIIKAVVETVEKIGEKKNAFKLLQKLNEIKERTDSLL-IVMHDNPDPDSMASAS 181
+++P ++ E A + LQ L + + D L + MHDNPDPD++A+A
Sbjct: 117 VVDPGAELLSHANSLTES-----GASQRLQALRQTLQGIDGRLGVFMHDNPDPDAIAAAV 171
Query: 182 ALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKKVLRGSYEIKRYDAIAIVD-AQ 240
L IA+ G+ Q Y G+I+H +NRA VN+L + + V S +DA+A+VD +
Sbjct: 172 GLQRIAEDAGVDSQACYFGEISHQENRAFVNLLEFDLRNVETQSDA--EFDAVALVDHSG 229
Query: 241 PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFVDIRTDVNATSSIMVEYLKALE 300
P N + D D V+I++DHH ++ F DIR D ATS+I+VEYL+
Sbjct: 230 PGVNDQLAPDTD---VDIVIDHHPPTTDVDAG-----FTDIRPDTGATSTILVEYLRGYG 281
Query: 301 IPITDTLATALFYGMYIDTKKFSK-LSRVDISAIEFLTGKVNYELLDKIEFPDISTETAE 359
I + +ATAL YG+ +DT F++ ++ D +A +L + ++L++IE P +S +T +
Sbjct: 282 IDVRTAVATALLYGIRVDTDDFAREITPRDFTAAAWLLPNADTDVLERIEAPSLSADTFD 341
Query: 360 ILARAILNRKMYKNVIISNVGFIANRDAIAEAADFLLRLEGITTVLVFGIVDDRIEISAR 419
+A I NR++ +V+ S VG I RD +A+ AD LL + G+ V+G D I +SAR
Sbjct: 342 TIAAGIRNRQLNGSVLASCVGQITARDTLAQTADRLLAMRGVAVTFVYGYFDGTIYVSAR 401
Query: 420 TRDVRVNIGKVMKEAFGEIGSGGGHAQMGGARIPLGIFKLAKD--KTSLLRLVEEAITEK 477
+R +++G V++ AF ++GS GGHA M GA++PLG+F + T+L ++EE + +
Sbjct: 402 SRRKDLDLGAVLRSAFDDLGSAGGHADMAGAQLPLGLFDAVGEDAATTLTEMIEEVVASR 461
Query: 478 FLE 480
F E
Sbjct: 462 FFE 464
>gb|AAG20850.1| (AE005153) Vng6183c [Halobacterium sp. NRC-1]
Length = 358
Score = 206 bits (520), Expect = 3e-52
Identities = 119/335 (35%), Positives = 201/335 (59%), Gaps = 15/335 (4%)
Query: 152 QKLNEIKERTDSLLIVMHDNPDPDSMASASALAVIAQSVGLRP-QIVYGGDITHHQNRAM 210
Q+ E+ TDSL I+ HDNPDPD++ASA AL IA+ + IVYGG +TH QNRAM
Sbjct: 29 QRFQELVASTDSLAILCHDNPDPDTLASALALEAIAKEWEVPTVDIVYGGTVTHQQNRAM 88
Query: 211 VNVLGMEFKKVLRGSYEIKRYDAIAIVD-AQPNGNITILDDDDLKRVEIIVDHHQILQNL 269
+NVL +E + + S + Y +A VD P N + +++ +II+DHH L
Sbjct: 89 INVLDIELTPIDQVS--LSDYGLVAFVDHGIPGQNNSAVEE---MTPDIIIDHHPT-DGL 142
Query: 270 REKLSPNCFVDIRTDVNATSSIMVEYLKALEIPITDTLATALFYGMYIDTKKFSK-LSRV 328
+ + FVD+R V AT++++ YL+ I + + LATAL + ++ +T F++ +
Sbjct: 143 QGQ-----FVDLRPAVGATATLLTRYLEIFSIELEERLATALLFALHRETLDFNRETTST 197
Query: 329 DISAIEFLTGKVNYELLDKIEFPDISTETAEILARAILNRKMYKNVIISNVGFIANRDAI 388
+ +A L ++ +++++ + ET + AI NR++ + ++S++G+I RDA+
Sbjct: 198 EHAAACVLHPHADHNIIEELTNSVFTPETISGIGDAIANREVRGSCLVSSLGWIRERDAV 257
Query: 389 AEAADFLLRLEGITTVLVFGIVDDRIEISARTRDVRVNIGKVMKEAFGEIGSGGGHAQMG 448
+AAD+LL+LEG++T +V+GIVDD + +S RT + +++IG VM+E F ++GS GGH M
Sbjct: 258 PQAADYLLQLEGVSTTIVYGIVDDNVHLSGRTSNSQLHIGNVMEETFDQVGSAGGHHDMA 317
Query: 449 GARIPLGIFKLAKDKTSL-LRLVEEAITEKFLEAL 482
G ++PLG D + + L+ +++ + AL
Sbjct: 318 GGQVPLGFIGSVDDGDDVAIDLINQSMMARLFGAL 352
>pir||S74940 hypothetical protein sll0639 - Synechocystis sp. (strain PCC 6803)
>gi|1652055|dbj|BAA16980.1| (D90902) hypothetical
protein [Synechocystis sp.]
Length = 417
Score = 142 bits (354), Expect = 9e-33
Identities = 99/328 (30%), Positives = 167/328 (50%), Gaps = 25/328 (7%)
Query: 164 LLIVMHDNPDPDSMASASALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFKK--- 220
L++V+ D PDPD+++SA A +IA ++ IVY G ++H +N A+V + G+ K+
Sbjct: 67 LILVIQDFPDPDALSSAWAFQLIAAQYEIQCDIVYAGTLSHQENIALVKLTGLPAKRWGP 126
Query: 221 VLRGSYEIKRYDAIAIVDAQ-PNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNCFV 279
+ ++ Y +VD+Q N + L + V +I+DHH + + FV
Sbjct: 127 QMLKDIDLSDYQGCVLVDSQGTNSQLMPLVQEANIPVVVIIDHHSPQDEVE---AEGAFV 183
Query: 280 DIRTDVNATSSIMVEYLKALEI------PITDTLATALFYGMYIDTKKFSKLSRVDISAI 333
DIR +T++I+ EYL+ + P ATAL +G+ DT + + A
Sbjct: 184 DIRPSSRSTATILTEYLQGGMLDFNSSNPTHVKCATALMHGLRSDTINLLQAQEAEFMAA 243
Query: 334 EFLTGKVNYELLDKIEFPDISTETAEILARAILNRKMYKNVIISNVGFI--ANRDAIAEA 391
+L+ + +LL+ + S E++ R++ NR + N ++ VG++ RDAI +A
Sbjct: 244 AYLSRIYDAQLLNAVLQSARSKRVMEVIERSLQNRVVQNNFSLAGVGYLRYEERDAIPQA 303
Query: 392 ADFLLRLEGITTVLVFGIVDDR---IEI---SARTRDVRVNIGKVMKEAFGEIGS----G 441
ADFL+ E + T LV+GIV DR IE+ S RT + ++ + +K++ G G+ G
Sbjct: 304 ADFLVSEENVHTALVYGIVHDRANDIELVIGSLRTNKLTLDPDEFLKDSLGMDGTGRYYG 363
Query: 442 GGHAQMGGARIPLGIFKLAKDKTSLLRL 469
GG GG IP+G D+ +L
Sbjct: 364 GGRDMAGGFEIPVGFLTGCNDQAEYTKL 391
>gb|AAG18856.1| (AE004989) Vng0262c [Halobacterium sp. NRC-1]
Length = 371
Score = 116 bits (288), Expect = 5e-25
Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 16/329 (4%)
Query: 153 KLNEIKERTDSLLIVMHDNPDPDSMASASALAVIAQSVGLRPQIVYGGDITHHQNRAMVN 212
+L + +S+ V+ +NP D++A+A+ L + + G+ ++ GD+T +A N
Sbjct: 50 RLRDAIASVESVAFVVPENPSVDALAAATGLCDLCEEWGVTGRVFAEGDVTSDDAKAFCN 109
Query: 213 VLGMEFKKVLRGSYEIKRYDAIAIVDAQPNGNITILDDDDLKRVEIIVDHHQILQNLREK 272
+ + + YD V G T+ + V ++ H R
Sbjct: 110 LFDLTLGIA---DDPLDDYDGAVAV----GGGGTVPSFANQPPVVAVIRH-------RPA 155
Query: 273 LSPNCFVDIRTDVNATSSIMVEYLKALEIPITDTLATALFYGMYIDTKKFSKL-SRVDIS 331
+ V +D AT++I+ + + +ATAL +G+ T++F ++ S D
Sbjct: 156 AVDHPLVITGSDAGATATIVSRFFERANHTPDQDVATALQHGIRAATREFRRVRSADDFR 215
Query: 332 AIEFLTGKVNYELLDKIEFPDISTETAEILARAILNRKMYKNVIISNVGFIANRDAIAEA 391
A FL V+ +D + P +S ET +++ AI NR+ + ++NVG + ++ EA
Sbjct: 216 AATFLEEFVDQGTIDTLRAPGMSGETFDVIGAAIENRERRASFAVTNVGSVPAVSSLEEA 275
Query: 392 ADFLLRLEGITTVLVFGIVDDRIEISARTRDVRVNIGKVMKEAFGEIGSGGGHAQMGGAR 451
AD LLRL+G+++ FG+ +D + + R DVR + V+ AF GG AR
Sbjct: 276 ADTLLRLDGVSSAAAFGVHEDTVVTACRADDVRTSAMDVLASAFDHPEGLGGDTDTATAR 335
Query: 452 IPLGIF-KLAKDKTSLLRLVEEAITEKFL 479
+PLG+F +++ D+ + L + +A T K L
Sbjct: 336 VPLGLFSRVSADRRATLDDLIDASTRKAL 364
>sp|Q58395|Y988_METJA HYPOTHETICAL PROTEIN MJ0988 >gi|2128620|pir||D64423 hypothetical
protein MJ0988 - Methanococcus jannaschii
>gi|1591650|gb|AAB98990.1| (U67541) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 329
Score = 83.1 bits (202), Expect = 6e-15
Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 25/330 (7%)
Query: 160 RTDSLLIVMHDNPDPDSMASASALAVIAQSVGLRPQIVYGGDITHHQNRAMVNVLGMEFK 219
+ D +L + H N DPD++ S AL +A + + D +R ++N +G
Sbjct: 8 KRDEVLFLCHHNADPDAVGSCVALKYLASQLNPNGKFRISADSVSKLSRNILNEIGE--- 64
Query: 220 KVLRGSYEI--KRYDAIAIVDAQPNGNITILDDDDLKRVEIIVDHHQILQNLREKLSPNC 277
R EI K + + IVD + + D+ +R I++DHH+ + L+ C
Sbjct: 65 ---RVDIEIYPKLPETVFIVDTASINQLKVNFDELKEREVILIDHHK-----KTDLADIC 116
Query: 278 -FVDIRTDVNATSSIMVEYLKALEIPITDTLATALFYGMYIDTKKFSKLSRVDISAIEFL 336
+ I+ D +TS I+ E K L I + AL G+ DTK + I +L
Sbjct: 117 KYYIIKEDYPSTSEIIAEIFKELNIFPPKNVRIALLCGIVYDTKHLKLANSKTFELISYL 176
Query: 337 TGKVNYELLDKI--EFPDISTETAEILARAILNRKMYKNVIISNVGFIANRDAIAEAADF 394
++++ + + + D+S TA + A + + + + + I+ + +++ +A
Sbjct: 177 IKDISFQKILYLLSQESDVSKRTAHLKACSRMEIREFDKLRIA-LSHVSSHEASCAKTIV 235
Query: 395 LLRLEGITTVLVFGIVDDRIEISARTR---DVRVNIGKVMKEAFGEI-GSGGGHAQMGGA 450
+ + + V+ + I +SAR R V++G +M++ E+ GSGGGH++ GG
Sbjct: 236 SIGAD-VAFVVAVRKKEKEIRVSARCRKHVSKYVHLGNLMEKIGKELGGSGGGHSEAGGL 294
Query: 451 RIPLGIFKLAKDKTSLLRLVEEAITEKFLE 480
P + +K K +++ V ++F+E
Sbjct: 295 NAP---YDKSKSKEKVIKEVLNLCYKRFVE 321
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.137 0.365
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153219195
Number of Sequences: 2977
Number of extensions: 5982660
Number of successful extensions: 20560
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20524
Number of HSP's gapped (non-prelim): 11
length of query: 488
length of database: 189,106,746
effective HSP length: 62
effective length of query: 426
effective length of database: 152,000,552
effective search space: 64752235152
effective search space used: 64752235152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 167 (69.5 bits)