BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0180 (PAB0180) DE:GLYCEROPHOSPHORYL DIESTER
PHOSPHODIESTERASE (EC 3.1.4.46)
(250 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75217 glycerophosphodiester phosphodiesterase (EC 3.1.4.46... 497 e-140
pir||G72232 hypothetical protein - Thermotoga maritima (strain M... 134 1e-30
sp|P54527|YQIK_BACSU HYPOTHETICAL 27.0 KD PROTEIN IN SPO0A-MMGA ... 105 6e-22
sp|P37965|GLPQ_BACSU GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE... 97 2e-19
dbj|BAB07419.1| (AP001519) glycerophosphoryl diester phosphodies... 96 4e-19
emb|CAB95977.1| (AL360034) putative phosphodiesterase [Streptomy... 95 9e-19
gi|9631618 similar to Escherichia coli glycerophosphoryl diester... 93 3e-18
dbj|BAB04799.1| (AP001510) glycerophosphodiester phosphodiestera... 92 4e-18
pir||T33984 hypothetical protein T12B3.3 - Caenorhabditis elegan... 90 3e-17
pir||T22710 hypothetical protein F55C5.2 - Caenorhabditis elegan... 89 5e-17
gi|9625018 membrane interacting protein of RGS16 [Mus musculus] ... 89 5e-17
dbj|BAA86651.1| (AB033763) glycerophosphoryl diester phosphodies... 88 9e-17
gb|AAF65233.1|AF212861_1 (AF212861) membrane interacting protein... 88 9e-17
emb|CAB61672.1| (AL133213) putative phosphodiesterase. [Streptom... 88 1e-16
gb|AAF60540.1| (AC024772) contains similarity to glycerophosphod... 88 1e-16
gi|7706617 membrane interacting protein of RGS16 [Homo sapiens] ... 85 1e-15
pir||D82185 probable glycerophosphoryl diester phosphodiesterase... 85 1e-15
gi|11432439 membrane interacting protein of RGS16 [Homo sapiens] 85 1e-15
pir||T44122 probable glycerophosphodiester phosphodiesterase (EC... 81 1e-14
pir||E75317 glycerophosphoryl diester phosphodiesterase - Deinoc... 81 1e-14
sp|P47535|Y293_MYCGE HYPOTHETICAL PROTEIN MG293 >gi|1361522|pir|... 81 1e-14
sp|P75367|Y293_MYCPN HYPOTHETICAL PROTEIN MG293 HOMOLOG (A05_ORF... 80 3e-14
pir||F70525 probable glpQ2 protein - Mycobacterium tuberculosis ... 80 3e-14
pir||E69827 glycerophosphodiester phosphodiesterase homolog yhdW... 80 3e-14
gi|10954945 Probable accF(pde) [Agrobacterium tumefaciens] >gi|6... 79 4e-14
pir||G75506 probable glycerophosphoryl diester phosphodiesterase... 78 1e-13
pir||A41652 probable glycerophosphodiester phosphodiesterase (EC... 77 2e-13
pir||T44421 hypothetical protein orf1 [imported] - Ralstonia eut... 74 1e-12
pir||G83271 probable phosphodiesterase PA2990 [imported] - Pseud... 70 2e-11
emb|CAC11773.1| (AL445064) hypothetical protein [Thermoplasma ac... 70 2e-11
>pir||G75217 glycerophosphodiester phosphodiesterase (EC 3.1.4.46) PAB018 -
Pyrococcus abyssi (strain Orsay)
>gi|5457699|emb|CAB49190.1| (AJ248283) GLYCEROPHOSPHORYL
DIESTER PHOSPHODIESTERASE (EC 3.1.4.46) [Pyrococcus
abyssi]
Length = 250
Score = 497 bits (1266), Expect = e-140
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MWERDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDR 60
MWERDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDR
Sbjct: 1 MWERDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDR 60
Query: 61 TTNISGRQKDMTLDEIKKARVSGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVK 120
TTNISGRQKDMTLDEIKKARVSGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVK
Sbjct: 61 TTNISGRQKDMTLDEIKKARVSGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVK 120
Query: 121 ENNPERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLKEELNLWSVNVPMEA 180
ENNPERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLKEELNLWSVNVPMEA
Sbjct: 121 ENNPERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLKEELNLWSVNVPMEA 180
Query: 181 IPIIGFEKTVEAIKWARSLGLKVVLWTENDELFYVNRNLERLKGLFEVVIANDVEKMLTH 240
IPIIGFEKTVEAIKWARSLGLKVVLWTENDELFYVNRNLERLKGLFEVVIANDVEKMLTH
Sbjct: 181 IPIIGFEKTVEAIKWARSLGLKVVLWTENDELFYVNRNLERLKGLFEVVIANDVEKMLTH 240
Query: 241 LRELGLKRKT 250
LRELGLKRKT
Sbjct: 241 LRELGLKRKT 250
>pir||G72232 hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4982193|gb|AAD36688.1|AE001805_13 (AE001805)
hypothetical protein [Thermotoga maritima]
Length = 222
Score = 134 bits (333), Expect = 1e-30
Identities = 85/232 (36%), Positives = 138/232 (58%), Gaps = 19/232 (8%)
Query: 7 VILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISG 66
+I+LGHRGY +KY ENTL AF KA+EAGA+GVE DV L+KDGK ++ HDE L R +
Sbjct: 1 MIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLDV 60
Query: 67 RQKDMTLDEIKKARVSGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVKENNPER 126
+ +D T+ E+K+ ++ ++ TL+E F + +D ++NIEIK+ +A V I K+ +
Sbjct: 61 KIRDATVSELKE--LTDGKITTLKEVFENVSDDKIINIEIKEREAADAVLEISKKR--KN 116
Query: 127 VMVSSFIIEALREYRKYDEETILGLLIDRE---EVVPMIPKLKEELNLWSVNVPMEAIPI 183
++ SSF ++ L E K T G LID E + + ++++E +S++VP +A +
Sbjct: 117 LIFSSFDLDLLDEKFK---GTKYGYLIDEENYGSIENFVERVEKE-RPYSLHVPYQAFEL 172
Query: 184 IGFEKTVEAIKWARSLGLKVVLWTENDELFYVNRNLERLKGLFEVVIANDVE 235
E VE ++ R G+ + +WT ND Y +++ + VI ++VE
Sbjct: 173 ---EYAVEVLRSFRKKGIVIFVWTLNDPEIY-----RKIRREIDGVITDEVE 216
>sp|P54527|YQIK_BACSU HYPOTHETICAL 27.0 KD PROTEIN IN SPO0A-MMGA INTERGENIC REGION
>gi|7435527|pir||F69961 glycerophosphodiester
phosphodiesterase homolog yqiK - Bacillus subtilis
>gi|1303930|dbj|BAA12586.1| (D84432) YqiK [Bacillus
subtilis] >gi|2634852|emb|CAB14349.1| (Z99116) similar
to glycerophosphodiester phosphodiesterase [Bacillus
subtilis]
Length = 239
Score = 105 bits (259), Expect = 6e-22
Identities = 62/141 (43%), Positives = 90/141 (62%), Gaps = 15/141 (10%)
Query: 12 HRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQKDM 71
HRG ++PENT+LAF K +EAGADG+E DV LTKDG+ +++HDE L+RTT++ G KD
Sbjct: 7 HRGASGQFPENTMLAFEKGIEAGADGIELDVQLTKDGRIVVIHDERLNRTTSLKGFVKDT 66
Query: 72 TLDEIKKARV--------SGQEVPTLEEAFS-VLPEDALVNIEIKD----VDAVKE-VAS 117
DE+K A S +VP LE+ S + +D L+NIE+K+ + ++E V
Sbjct: 67 AYDEVKTANAAAGHDQAYSDIKVPLLEDVLSWAVKKDFLINIELKNSVIRYEGMEEKVLE 126
Query: 118 IVKENNPE-RVMVSSFIIEAL 137
VK N E RV++S+F ++L
Sbjct: 127 AVKRFNVEDRVILSTFNHDSL 147
>sp|P37965|GLPQ_BACSU GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (GLYCEROPHOSPHODIESTER
PHOSPHODIESTERASE) >gi|2126947|pir||I40418
glycerophosphoryl diester phosphodiesterase glpQ -
Bacillus subtilis >gi|403373|emb|CAA81292.1| (Z26522)
glycerophosphoryl diester phosphodiesterase [Bacillus
subtilis] >gi|2632499|emb|CAB12007.1| (Z99105)
glycerophosphoryl diester phosphodiesterase [Bacillus
subtilis] >gi|3599635|dbj|BAA33110.1| (AB006424) ybeD
[Bacillus subtilis]
Length = 293
Score = 97.1 bits (238), Expect = 2e-19
Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Query: 5 DEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNI 64
D ++ + HRG PE+T+L++ A + AD +E D+ +TKDGK I+MHDE LDRTTN
Sbjct: 36 DRILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGKLIVMHDEKLDRTTNG 95
Query: 65 SGRQKDMTLDEIK----------------KARVSGQEVPTLEEAFSVLPEDALVNIEIKD 108
G KD TL +IK K + G +VPTLEE + A IE K
Sbjct: 96 MGWVKDHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFGKHANYYIETKS 155
Query: 109 VDAV-----KEVASIV------KENNPERVMVSSFIIEALREYRKYDEETILGLLIDREE 157
D K +AS+ K + P +V++ SF E+L + + L++ ++
Sbjct: 156 PDTYPGMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQLQPNLPTVQLLEAKQ 215
Query: 158 VVPMIPKLKEELNLWSVNVPMEAIPIIGFEKTVEAIKWARSLGLKVVLWTENDE 211
+ M EE+ ++V + + E ++ RS GL + +T N+E
Sbjct: 216 MASMTDAALEEIKTYAVGAGPDYKAL-----NQENVRMIRSHGLLLHPYTVNNE 264
>dbj|BAB07419.1| (AP001519) glycerophosphoryl diester phosphodiesterase [Bacillus
halodurans]
Length = 284
Score = 96.0 bits (235), Expect = 4e-19
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 17/157 (10%)
Query: 3 ERDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTT 62
++ ++I + HRG PENT+ AF+K + D +EFDV +TKDG+ ++MHD T+DRTT
Sbjct: 35 DQQKMINIAHRGASGHAPENTMAAFQKGFDMKVDYIEFDVHMTKDGELVLMHDLTVDRTT 94
Query: 63 NISGRQKDMTLDEIKKARVS--------GQEVPTLEEAFSVLPEDALVNIEIKDVDAV-- 112
N G D+TLDEIK+ G++VPT EE V + IE+K +
Sbjct: 95 NGHGYVSDLTLDEIKQFDAGSWFHEDFVGEKVPTFEETLDVFRGKVGLLIELKSPERYPG 154
Query: 113 --KEVASIVKENNPER-----VMVSSFIIEALREYRK 142
++VA +KE +R V++ SF E++++ ++
Sbjct: 155 MEEKVAEALKERKMDRSSNHKVIIQSFNHESMKKSKE 191
>emb|CAB95977.1| (AL360034) putative phosphodiesterase [Streptomyces coelicolor
A3(2)]
Length = 227
Score = 94.8 bits (232), Expect = 9e-19
Identities = 69/208 (33%), Positives = 102/208 (48%), Gaps = 17/208 (8%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
+ +GHRG M PENTL +F A +AG D VE D+ L+KDG ++MHD +DRTT+ +G
Sbjct: 4 LTIGHRGAMGVEPENTLRSFVAAEQAGLDVVELDLHLSKDGALVVMHDADVDRTTDGTGA 63
Query: 68 QKDMTLDEIKKARVS-GQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASI-VKENNPE 125
D TL+E++ G+ +P EE + + EIKD A + +A + ++ + +
Sbjct: 64 IADKTLEELRALDAGRGERIPVFEEVLDAV--SVPLQAEIKDAAAARLLADVMLRRDLVD 121
Query: 126 RVMVSSFIIEALREYRKY--DEETILGLLIDREEVVPMIPKLKEELNLWSVNVPMEAIPI 183
RV V SF EA+ E + T L EVV K + +N
Sbjct: 122 RVEVISFHDEAIVEIARLVPGVRTALVAQYYGPEVVDRAVKAGAKTLCLDIN-------- 173
Query: 184 IGFEKTVEAIKWARSLGLKVVLWTENDE 211
T+E + AR GL+V WT N +
Sbjct: 174 ---RVTLEIVHKARKAGLRVFCWTVNTQ 198
>gi|9631618 similar to Escherichia coli glycerophosphoryl diester
phosphodiesterase, corresponds to Swiss-Prot Accession
Number P10908 [Paramecium bursaria Chlorella virus 1]
>gi|7461235|pir||T17539 glycerophosphoryl diester
phosphodiesterase-like protein A49L - Chlorella virus
PBCV-1 >gi|624072|gb|AAC96417.1| (U42580) similar to
Escherichia coli glycerophosphoryl diester
phosphodiesterase, corresponds to Swiss-Prot Accession
Number P10908 [Paramecium bursaria Chlorella virus 1]
Length = 219
Score = 92.8 bits (227), Expect = 3e-18
Identities = 50/149 (33%), Positives = 85/149 (56%), Gaps = 7/149 (4%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
+L+GHRG + +PENT+++FR + +EFDV TKD ++ HD TLDR T+ G+
Sbjct: 1 MLIGHRGCSALFPENTMMSFRHVIPKA---IEFDVRKTKDNIPVVFHDSTLDRMTHSCGK 57
Query: 68 QKDMTLDEIK--KARVSGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVKENN-- 123
K+ TL+E+ R S +++PTL + ++ +IEIK D V ++++N
Sbjct: 58 VKNFTLNELSNLSIRNSTEKIPTLNQVLDEFKDEYTYDIEIKSSDTASAVVETIQKSNIP 117
Query: 124 PERVMVSSFIIEALREYRKYDEETILGLL 152
E +V+SF + ++ R D++ GL+
Sbjct: 118 YENTLVTSFKWDEIQHVRTIDDKIPTGLI 146
>dbj|BAB04799.1| (AP001510) glycerophosphodiester phosphodiesterase [Bacillus
halodurans]
Length = 250
Score = 92.4 bits (226), Expect = 4e-18
Identities = 58/147 (39%), Positives = 84/147 (56%), Gaps = 15/147 (10%)
Query: 1 MWERDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDR 60
M ++ + HRG KYPENTL AFR A GADG+E DV LTKD + I++HD L+R
Sbjct: 1 MSQKQRTHIYAHRGVSCKYPENTLSAFRAAEGVGADGIELDVQLTKDDQLIVIHDLHLNR 60
Query: 61 TTNISGRQKDMTLDEIKK--------ARVSGQEVPTLEEAFSVLPEDALV-NIEIKDVDA 111
TT+ SG + TL E+K+ R +G+ +PTL+E F+ + L+ N+E+K V
Sbjct: 61 TTSGSGLVRAHTLSELKRLDAGSWFDERFTGETLPTLDEVFAWAQSNELIFNVELKGVVE 120
Query: 112 VKE------VASIVKENNPERVMVSSF 132
++ A I +RV++SSF
Sbjct: 121 DRDRLFTAISACIDTFKMRDRVILSSF 147
>pir||T33984 hypothetical protein T12B3.3 - Caenorhabditis elegans
>gi|4262615|gb|AAD14735.1| (AF125960) contains
similarity to glycerophosphodiester phosphodiesterases
[Caenorhabditis elegans]
Length = 356
Score = 89.7 bits (219), Expect = 3e-17
Identities = 76/282 (26%), Positives = 132/282 (45%), Gaps = 55/282 (19%)
Query: 11 GHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQKD 70
GHRG +PEN++ F +A GAD +EFDV LTKDGK ++MHD+ LDRTT++ G +D
Sbjct: 67 GHRGAPKSFPENSMAGFAQAKADGADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRD 126
Query: 71 MTLDEIKK------------------ARVSGQEVPTLEEAFSVLPED---ALVNIEIKDV 109
T E+ + A VS + VP +E+ E+ L +++ D
Sbjct: 127 KTRAELDRCDISATFKRTAPGDHCRLATVSRERVPDMEDVVKWAVENNTRMLFDVKDSDN 186
Query: 110 DAVKEVASIV-KENNPERVMVSSFIIEALREYRKYDEETILGL--------LIDREEVVP 160
+ V ++A++ K N ++ +V SF + +K D++ + GL D E + P
Sbjct: 187 ELVDQIANLFQKYNLYDKAIVCSFFPWVVYRIKKGDQKILTGLTWRLKFWSYHDIENIRP 246
Query: 161 -------MIPKLKEELNLWSVN------VPMEAIPIIGFEKTVEAIKWARSLGLKVVLWT 207
M+ ++ + ++W + + + + + + I R G++V +WT
Sbjct: 247 RYSGPKQMLFEMIDVAHVWLLKKVTPWYLGADLLLTNNLDISQALIMDQRRRGMRVAVWT 306
Query: 208 END--ELFYVNRNLERLKGLFEVVIANDVEKMLT---HLREL 244
ND E+ ++ + L + I D ++ T HL EL
Sbjct: 307 VNDMAEMHWMLKTL-------NIPILTDYPELTTQAAHLEEL 341
>pir||T22710 hypothetical protein F55C5.2 - Caenorhabditis elegans
>gi|3877620|emb|CAB01567.1| (Z78198) Similarity to
E.coli glyucerophosphoryldiester phosphodiesterase
(SW:UGPQ_ECOLI) [Caenorhabditis elegans]
Length = 296
Score = 88.9 bits (217), Expect = 5e-17
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 42/264 (15%)
Query: 11 GHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQKD 70
GHRG + PENT+ + +KA E G D VEFD+ ++ DG ++MHD+T +RT N + +
Sbjct: 35 GHRGSPKRAPENTIESLKKAKEDGCDLVEFDIHMSSDGVPLLMHDDTTERTGNAKLKVEH 94
Query: 71 MTLDEIKKARVS-----GQEVPTLEEAFSVLPEDAL------VNIEIKDVDAVKEVASIV 119
T +++ ++ ++P L EA E+ L N +K ++AV E I
Sbjct: 95 STWQQLEAVVLNPVNGVNAKIPRLNEAIDFCVENGLKMLFDMKNDNLKLMEAVSE--EIK 152
Query: 120 KENNPERVMVSSFIIEALREYRKYDEETILGLLIDREE----------------VVPMIP 163
K N ++VMVSSF +K D + I G+ +DR
Sbjct: 153 KRNLYDQVMVSSFNPIVPWRLKKIDPKIITGITVDRSYYSYSDDHRKSPFSTSFFAHFWN 212
Query: 164 KLKEELNLWSVNVPMEAIP--------IIGFEKTVE-AIKWARSLGLKVVLWTENDELFY 214
++ +E+N+ + P+ +P +I F+ E A++ + G V+ WT NDE +
Sbjct: 213 EILDEINM--IIQPLYILPRFLGVDVVMISFQLISENAVRESNEKGFSVISWTVNDEDYM 270
Query: 215 VNRNLERLKGLFEVVIANDVEKML 238
R L +L F I ++V++ +
Sbjct: 271 --RILTKLNVPFLTDIGSEVDRKM 292
>gi|9625018 membrane interacting protein of RGS16 [Mus musculus]
>gi|7637873|gb|AAF65232.1|AF212860_1 (AF212860) membrane
interacting protein of RGS16 [Mus musculus]
Length = 331
Score = 88.9 bits (217), Expect = 5e-17
Identities = 55/163 (33%), Positives = 85/163 (51%), Gaps = 15/163 (9%)
Query: 4 RDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTN 63
RD V + HRG PENTL A R+A + GA GVE D+ T DG ++MHD T+DRTT+
Sbjct: 62 RDRVSAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGVPVLMHDNTVDRTTD 121
Query: 64 ISGRQKDMTLDEIKKARVSG----------QEVPTLEEAFS-VLPEDALVNIEIK-DVDA 111
SGR D+T ++++K + + +PTL+EA + L + + ++K D
Sbjct: 122 GSGRLCDLTFEQVRKLNPAANHRLRNEFPDERIPTLKEAVTECLRHNLTIFFDVKGHADM 181
Query: 112 VKEVASIVKENNPE---RVMVSSFIIEALREYRKYDEETILGL 151
+ P+ MV SF+ E + + R+ D++ I L
Sbjct: 182 ASAALKNIYTEFPQLYNNSMVCSFLPEVIYKMRQTDQKVITAL 224
>dbj|BAA86651.1| (AB033763) glycerophosphoryl diester phosphodiesterase homologue
[Staphylococcus aureus]
Length = 247
Score = 88.2 bits (215), Expect = 9e-17
Identities = 67/218 (30%), Positives = 110/218 (49%), Gaps = 48/218 (22%)
Query: 11 GHRGYMSKYPENTLLAFRKALEA-GADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQK 69
GHRG SK PENT+ +F+ A E G + +E DV +TKD + II+HD+ L+RTTN+SG
Sbjct: 6 GHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEIT 65
Query: 70 DMTLDEIKKA--------RVSGQEVPTLEEAFSVLPE-DALVNIEIKDVDAVKEVA---S 117
++ DEIK A + + +PT ++ + E + +N+E+K + +A S
Sbjct: 66 ELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGLALSKS 125
Query: 118 IVKE--------NNPERVMVSSFII-------EALREYR----------KYDEETIL--- 149
+VK+ N + V++SSF + E + +Y + D T+L
Sbjct: 126 MVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRTLLDYC 185
Query: 150 -GLLIDREEV------VPMIPKLKEELNLWSVNVPMEA 180
+++ E+ V M+ + ELN+W+VN P A
Sbjct: 186 NAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARA 223
>gb|AAF65233.1|AF212861_1 (AF212861) membrane interacting protein of RGS16 [Rattus
norvegicus]
Length = 331
Score = 88.2 bits (215), Expect = 9e-17
Identities = 60/166 (36%), Positives = 88/166 (52%), Gaps = 21/166 (12%)
Query: 4 RDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTN 63
RD V + HRG PENTL A R+A + GA GVE D+ T DG ++MHD T+DRTT+
Sbjct: 62 RDRVSAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGVPVLMHDNTVDRTTD 121
Query: 64 ISGRQKDMTLDEIKKARVSG----------QEVPTLEEAFSVLPEDALVNIEI-KDVDAV 112
SGR D+T ++++K + + +PTL EA + E N+ I DV
Sbjct: 122 GSGRLCDLTFEQVRKLNPAANHRLRNEFPDERIPTLREA---VTECLCHNLTIFFDVKGH 178
Query: 113 KEVASIVKEN----NPE---RVMVSSFIIEALREYRKYDEETILGL 151
++AS +N P+ MV SF+ E + + R+ D++ I L
Sbjct: 179 ADMASAALKNIYMEFPQLYNNSMVCSFLPEVIYKMRQTDQKVITAL 224
>emb|CAB61672.1| (AL133213) putative phosphodiesterase. [Streptomyces coelicolor
A3(2)]
Length = 255
Score = 87.8 bits (214), Expect = 1e-16
Identities = 68/216 (31%), Positives = 109/216 (49%), Gaps = 23/216 (10%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
I HRG + ENTL FR+A+ AG +E DV T+DGK + HD TLDR T+ +GR
Sbjct: 16 IAFAHRGGAADGLENTLRQFRRAVGAGYRYIETDVHATRDGKLVAFHDGTLDRVTDGAGR 75
Query: 68 QKDMTLDEIKKARVSGQE-VPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVKENNP-E 125
D+ + ++ ARV+G+E VP EE P N+++K A++ + ++ +N +
Sbjct: 76 IADLPWENVRHARVAGEEPVPLFEELLETFPA-VRWNVDVKAEPALEPLLELIGRHNAWD 134
Query: 126 RVMVSSF----IIEAL-----REYRKYDEETILGLLIDREEVVPMIPKLKEELNLWSVNV 176
R+ V SF ++ A R +LGL + R VP+ P+ + + V
Sbjct: 135 RICVGSFSEARVVRAQRLAGPRLATSCGTRGVLGLRL-RSWGVPVAPR----RSAVAAQV 189
Query: 177 P--MEAIPIIGFEKTVEAIKWARSLGLKVVLWTEND 210
P +P++ ++ A + GL+V +WT ND
Sbjct: 190 PETQSGVPVVDH----RFLRAAHARGLQVHVWTVND 221
>gb|AAF60540.1| (AC024772) contains similarity to glycerophosphodiester
phosphodiesterases [Caenorhabditis elegans]
Length = 298
Score = 87.8 bits (214), Expect = 1e-16
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 22/163 (13%)
Query: 11 GHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQKD 70
GHRG +PEN++ F +A GAD +EFDV LTKDGK ++MHD+ LDRTT++ G +D
Sbjct: 67 GHRGAPKSFPENSMAGFAQAKADGADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRD 126
Query: 71 MTLDEIKK------------------ARVSGQEVPTLEEAFSVLPED---ALVNIEIKDV 109
T E+ + A VS + VP +E+ E+ L +++ D
Sbjct: 127 KTRAELDRCDISATFKRTAPGDHCRLATVSRERVPDMEDVVKWAVENNTRMLFDVKDSDN 186
Query: 110 DAVKEVASIV-KENNPERVMVSSFIIEALREYRKYDEETILGL 151
+ V ++A++ K N ++ +V SF + +K D++ + GL
Sbjct: 187 ELVDQIANLFQKYNLYDKAIVCSFFPWVVYRIKKGDQKILTGL 229
>gi|7706617 membrane interacting protein of RGS16 [Homo sapiens]
>gi|7637877|gb|AAF65234.1|AF212862_1 (AF212862) membrane
interacting protein of RGS16 [Homo sapiens]
Length = 331
Score = 84.7 bits (206), Expect = 1e-15
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 21/166 (12%)
Query: 4 RDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTN 63
RD + + HRG PENTL A R+A + GA GVE D+ T DG ++MHD T+DRTT+
Sbjct: 62 RDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGIPVLMHDNTVDRTTD 121
Query: 64 ISGRQKDMTLDEIKKARVSG----------QEVPTLEEAFS-VLPEDALVNIEIKD---- 108
+GR D+T ++I+K + +++PTL EA + L + + ++K
Sbjct: 122 GTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLNHNLTIFFDVKGHAHK 181
Query: 109 -VDAVKEVASIVKE--NNPERVMVSSFIIEALREYRKYDEETILGL 151
+A+K++ + NN +V SF+ E + + R+ D + I L
Sbjct: 182 ATEALKKMYMEFPQLYNNS---VVCSFLPEVIYKMRQTDRDVITAL 224
>pir||D82185 probable glycerophosphoryl diester phosphodiesterase VC1554
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9656061|gb|AAF94708.1| (AE004233) glycerophosphoryl
diester phosphodiesterase, putative [Vibrio cholerae]
Length = 237
Score = 84.7 bits (206), Expect = 1e-15
Identities = 57/185 (30%), Positives = 100/185 (53%), Gaps = 18/185 (9%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
I++GHRG YPENT ++ + A+ G VE DV TKD ++ HD T+DR +N GR
Sbjct: 5 IIVGHRGVAGTYPENTRVSVQAAINLGLSWVEVDVQPTKDNVLVVCHDHTIDRCSNGKGR 64
Query: 68 QKDMTLDEIKK--------ARVSGQEVPTLEEAFSVLPE-DALVNIEIK----DVDAVKE 114
+ TL E+K+ R +G+ + TLEE + E D +NIE+K DV +V +
Sbjct: 65 IDEYTLAELKQLDFGAWFDPRFAGETIMTLEELLVLAAEHDLGLNIEVKVDKHDVASVVQ 124
Query: 115 VASIVKENNP---ERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLKEELNL 171
+ +P +++++SSF + + + ++ LG+L +R + ++ +++N
Sbjct: 125 QLKAQLDQSPLVADKILLSSFSHDIILQLHQHCPGYKLGILSER--LTQRDRQVLKQVNA 182
Query: 172 WSVNV 176
+S N+
Sbjct: 183 FSCNL 187
>gi|11432439 membrane interacting protein of RGS16 [Homo sapiens]
Length = 371
Score = 84.7 bits (206), Expect = 1e-15
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 21/166 (12%)
Query: 4 RDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTN 63
RD + + HRG PENTL A R+A + GA GVE D+ T DG ++MHD T+DRTT+
Sbjct: 102 RDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGIPVLMHDNTVDRTTD 161
Query: 64 ISGRQKDMTLDEIKKARVSG----------QEVPTLEEAFS-VLPEDALVNIEIKD---- 108
+GR D+T ++I+K + +++PTL EA + L + + ++K
Sbjct: 162 GTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLNHNLTIFFDVKGHAHK 221
Query: 109 -VDAVKEVASIVKE--NNPERVMVSSFIIEALREYRKYDEETILGL 151
+A+K++ + NN +V SF+ E + + R+ D + I L
Sbjct: 222 ATEALKKMYMEFPQLYNNS---VVCSFLPEVIYKMRQTDRDVITAL 264
>pir||T44122 probable glycerophosphodiester phosphodiesterase (EC 3.1.4.46)
[imported] - Staphylococcus aureus (fragment)
>gi|5360854|dbj|BAA82224.1| (D86934)
glycerophosphoryldiester phosphodiesterase
[Staphylococcus aureus]
Length = 210
Score = 81.1 bits (197), Expect = 1e-14
Identities = 51/143 (35%), Positives = 81/143 (55%), Gaps = 21/143 (14%)
Query: 11 GHRGYMSKYPENTLLAFRKALEA-GADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQK 69
GHRG SK PENT+ +F+ A E G + +E DV +TKD + II+HD+ L+RTTN+SG
Sbjct: 6 GHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEIT 65
Query: 70 DMTLDEIKKA--------RVSGQEVPTLEEAFSVLPE-DALVNIEIKDVDAVKEVA---S 117
++ DEIK A + + +PT ++ + E + +N+E+K + +A S
Sbjct: 66 ELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGLALSKS 125
Query: 118 IVKE--------NNPERVMVSSF 132
+VK+ N + V++SSF
Sbjct: 126 MVKQVEEQLTNLNQNQEVLISSF 148
>pir||E75317 glycerophosphoryl diester phosphodiesterase - Deinococcus
radiodurans (strain R1)
>gi|6459876|gb|AAF11631.1|AE002044_4 (AE002044)
glycerophosphoryl diester phosphodiesterase [Deinococcus
radiodurans]
Length = 285
Score = 81.1 bits (197), Expect = 1e-14
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 10 LGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQK 69
+ H+G + +P NTL A+R A+ G D +E D+ T+DG ++ HD TLDR T+ GR
Sbjct: 35 IAHQGGEALWPSNTLTAYRGAVALGVDLLEMDLHATRDGALVLSHDATLDRLTDTQGRIA 94
Query: 70 DMTLDEIKKA----------------RVSGQEVPTLEEAFSVLPEDALVNIEIKDVD--- 110
D+TL+++ +A R G +V L++ P L+ IE+K
Sbjct: 95 DLTLEQVLRADAGYTLTPAGGSGFPFRGQGVQVAQLKDVLREFPNTPLI-IELKQASPSI 153
Query: 111 AVKEVASIVKENNPERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLKEELN 170
A A + + RV+ +SF AL E+R+ E + + E+ P++ K L+
Sbjct: 154 AAPFCAELRRAGATGRVIAASFSDAALNEFRRLCPEVMTSM--TERELRPLVLLSKVGLS 211
Query: 171 LWSVNVPMEA-IPII--GFEKTVEA-IKWARSLGLKVVLWTENDE 211
+ A +P+ G E A ++ + G+ V +WT +DE
Sbjct: 212 ALAPTPGQVAQVPVRSGGIEIVTPAFVRALHARGVAVQVWTIDDE 256
>sp|P47535|Y293_MYCGE HYPOTHETICAL PROTEIN MG293 >gi|1361522|pir||D64232
glycerophosphoryl diester phosphodiesterase (glpQ)
homolog - Mycoplasma genitalium
>gi|3844872|gb|AAC71514.1| (U39709) glycerophosphoryl
diester phosphodiesterase, putative [Mycoplasma
genitalium]
Length = 244
Score = 80.8 bits (196), Expect = 1e-14
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 43/211 (20%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
+LL HRGY PENT LAF A E DG+E DV LTKD + +I+HDET RT ++
Sbjct: 6 LLLAHRGYSFIAPENTKLAFDLAFEYCFDGIELDVHLTKDEQLVIIHDETTLRTALVNKE 65
Query: 68 QKDMTLDEIKK--------ARVSGQEVPTLEEAFSV-LPEDALVNIEIKD-----VDAVK 113
+ +L +K+ ++ Q + TL+E + L + L+NIEIK + K
Sbjct: 66 VEFESLVSLKRDDHSAFFHLKIQFQSILTLKEFLDLYLDKFKLINIEIKTDQKPYLGIEK 125
Query: 114 EVASIVK---ENNPERVMVSSFIIEALRE--------------YRKYDEETILGLLIDR- 155
++ +VK + ++++ SSF E+L++ + K ETI I +
Sbjct: 126 KLVDLVKGYGKKAIDKILFSSFNFESLQKVYDLDNSYKKGFLFWTKKQFETISTARIQKI 185
Query: 156 -----------EEVVPMIPKLKEELNLWSVN 175
E+ MI KL LNLW+VN
Sbjct: 186 CQFLHPWTKIYEKYPQMIKKLNLPLNLWTVN 216
>sp|P75367|Y293_MYCPN HYPOTHETICAL PROTEIN MG293 HOMOLOG (A05_ORF241A)
>gi|2146141|pir||S73747 glycerophosphoryl diester
phosphodiesterase glpQ - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|1674106|gb|AAB96069.1| (AE000041)
glycerophosphoryl diester phosphodiesterase [Mycoplasma
pneumoniae]
Length = 241
Score = 79.6 bits (193), Expect = 3e-14
Identities = 72/237 (30%), Positives = 112/237 (46%), Gaps = 35/237 (14%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
+LL HRGY PENT LAF A + DGVE DV LTKDG+ +I+HDET RT +
Sbjct: 6 LLLAHRGYSDIAPENTQLAFELAFQYRFDGVELDVHLTKDGELVIIHDETTTRTALVDKT 65
Query: 68 QKDMTLDEIK--------KARVSGQEVPTLEEAF-SVLPEDALVNIEIK-------DVDA 111
+ TL +K K + Q + TL+E F L + L+N+EIK ++A
Sbjct: 66 IELETLASLKQDDHSAFFKFKTQPQPIMTLKEFFDQYLDKFQLINVEIKTDQKEYPGIEA 125
Query: 112 -VKEVASIVKENNPERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLK---- 166
+ +A + E+V+ SSF +L+ + + L ++ + LK
Sbjct: 126 KIDALAQQYGKKVIEKVVFSSFNFASLQRLYDINPNYQIAFLFWTKKQFQAVDALKIKQV 185
Query: 167 -EELNLWSVNVPMEAIPIIGFEKTVEAIKWARSLGLKVVLWTENDELFYVNRNLERL 222
+ L+ W+ N+ +EK + + SL L + LWT N E+ + +R+
Sbjct: 186 CQYLHPWT-NI---------YEKFPDMV---LSLQLPLGLWTLNSEVKFHQFRQDRM 229
>pir||F70525 probable glpQ2 protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2193938|emb|CAB09602.1| (Z96800) glpQ2
[Mycobacterium tuberculosis]
Length = 256
Score = 79.6 bits (193), Expect = 3e-14
Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
Query: 8 ILLGHRGYMS-KYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISG 66
I + HRG+ S + P N++ AF++A + G +E DV T+DG +I+HD L +SG
Sbjct: 10 IAMAHRGFTSFRLPMNSMGAFQEAAKLGFRYIETDVRATRDGVAVILHDRRLAPGVGLSG 69
Query: 67 RQKDMTLDEIKKARV-SGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIVKE-NNP 124
+ +++KA++ +GQ +PTLE+ + LP D VNI+IK A++ ++++ N
Sbjct: 70 AVDRLDWRDVRKAQLGAGQSIPTLEDLLTALP-DMRVNIDIKAASAIEPTVNVIERCNAH 128
Query: 125 ERVMVSSF 132
RV++ SF
Sbjct: 129 NRVLIGSF 136
>pir||E69827 glycerophosphodiester phosphodiesterase homolog yhdW - Bacillus
subtilis >gi|2226218|emb|CAA74507.1| (Y14082)
hypothetical protein [Bacillus subtilis]
>gi|2633297|emb|CAB12801.1| (Z99109) similar to
glycerophosphodiester phosphodiesterase [Bacillus
subtilis]
Length = 243
Score = 79.6 bits (193), Expect = 3e-14
Identities = 51/151 (33%), Positives = 81/151 (52%), Gaps = 21/151 (13%)
Query: 9 LLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQ 68
++ HRG PENT+ AF A++ AD +E DV LTKD + +++HD+ +DRTTN SG
Sbjct: 3 IIAHRGASGYAPENTIAAFDLAVKMNADMIELDVQLTKDRQIVVIHDDRVDRTTNGSGFV 62
Query: 69 KDMTLDEIKK--------ARVSGQEVPTLEEAFSVLPEDALVNIEIK----DVDAVKEVA 116
KD TL+E++K G+ +PTLE + + IE+K V +EV
Sbjct: 63 KDFTLEELQKLDAGSWYGPAFQGERIPTLEAVLKRYHKKIGLLIELKGHPSQVGIEEEVG 122
Query: 117 SIVKE-----NNPERVMVSSFIIEALREYRK 142
++ + NN +V SF +++ +R+
Sbjct: 123 QLLGQFSFSINN----IVQSFQFRSVQRFRE 149
>gi|10954945 Probable accF(pde) [Agrobacterium tumefaciens]
>gi|6498298|dbj|BAA87750.1| (AB016260) Probable
accF(pde) [Agrobacterium tumefaciens]
Length = 266
Score = 79.2 bits (192), Expect = 4e-14
Identities = 46/118 (38%), Positives = 70/118 (58%), Gaps = 11/118 (9%)
Query: 5 DEVILLGHRGYMSKYPENTLLAFRKALEAGADGV--EFDVWLTKDGKTIIMHDETLDRTT 62
+ + L GHRG+ + PENTL AFRKA E G V E D+ +T+DG+ +++HD+T+DRTT
Sbjct: 9 ETIRLGGHRGHSAGAPENTLAAFRKAFEFGGRNVTCETDLGITRDGELVLIHDKTVDRTT 68
Query: 63 NISGRQKDMTLDEIKK--------ARVSGQEVPTLEEAFSVLPEDALV-NIEIKDVDA 111
+ G DMT E+ K + G+ VP L++A + E ++ +E+K DA
Sbjct: 69 DGHGIVHDMTYSELSKLDAGSWFSSEFVGERVPLLKDALQLARELGIIYQLELKIYDA 126
>pir||G75506 probable glycerophosphoryl diester phosphodiesterase - Deinococcus
radiodurans (strain R1)
>gi|6458230|gb|AAF10117.1|AE001912_2 (AE001912)
glycerophosphoryl diester phosphodiesterase, putative
[Deinococcus radiodurans]
Length = 225
Score = 77.6 bits (188), Expect = 1e-13
Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
+LLGHRG ++ ENTL +F+ AL+AG DG+E DV DG + HD L GR
Sbjct: 3 LLLGHRGSPREHTENTLASFQAALDAGLDGIELDVRRLADGTLAVHHDAALP-----DGR 57
Query: 68 QKDMTLDEIKKARVSGQEVPTLEEAFS-VLPEDALVNIEIK------DVDAVKEVASIVK 120
Q L + +A + + VPTL E + + +A VN+E+K D V+ + SI
Sbjct: 58 Q----LPHLTRAELP-ERVPTLPEVLAWAVDCEAYVNLELKWESPLPDDRVVRMLDSIRV 112
Query: 121 ENNPERVMVSSFIIEALREYRKYDEETILGLLIDRE-EVVPMIPKLKEELNLWSVNVPME 179
RV+VSSF LR R+ E GLL R + P+ L E + W ++
Sbjct: 113 HGLSRRVIVSSFNPLLLRAARELAPEVERGLLYHRPYRLGPL--NLPEAVGRW-----VD 165
Query: 180 AIPIIGFEKTVEA--IKWARSLGLKVVLWTEND 210
+ + ++A I AR G +V WT N+
Sbjct: 166 CAALHPQHQLIDAPLISMARRRGWRVNAWTVNE 198
>pir||A41652 probable glycerophosphodiester phosphodiesterase (EC 3.1.4.46) -
Staphylococcus aureus >gi|48713|emb|CAA36830.1| (X52594)
orf145 [Staphylococcus aureus]
>gi|2791990|emb|CAA74379.1| (Y14051) hypothetical
protein [Staphylococcus aureus]
Length = 145
Score = 77.3 bits (187), Expect = 2e-13
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 13/124 (10%)
Query: 11 GHRGYMSKYPENTLLAFRKALEA-GADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQK 69
GHRG SK PENT+ +F+ A E G + +E DV +TKD + II+HD+ L+RTTN+SG
Sbjct: 6 GHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEIT 65
Query: 70 DMTLDEIKKA--------RVSGQEVPTLEEAFSVLPE-DALVNIEIKDVDAVKEVA---S 117
++ DEIK A + + +PT ++ + E + +N+E+K + +A S
Sbjct: 66 ELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGLALSKS 125
Query: 118 IVKE 121
+VK+
Sbjct: 126 MVKQ 129
>pir||T44421 hypothetical protein orf1 [imported] - Ralstonia eutropha
>gi|1279200|emb|CAA62979.1| (X91877) orf1 [Ralstonia
eutropha] >gi|1588693|prf||2209294A ORF 1 [Ralstonia
eutropha]
Length = 248
Score = 74.1 bits (179), Expect = 1e-12
Identities = 56/163 (34%), Positives = 77/163 (46%), Gaps = 17/163 (10%)
Query: 10 LGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGRQK 69
+ HRG PENTL AFR G EFDV L+ DGK ++MHD TLDRTT+ GR
Sbjct: 15 IAHRGAGKLAPENTLAAFRHGAGFGYRMFEFDVKLSADGKPVLMHDATLDRTTSGQGRVD 74
Query: 70 DMTLDEIKK--------ARVSGQEVPTLEEAFSVLPEDAL-VNIEIKDVDAVKEVASIVK 120
+TL E+ + +G+ VPTL + L VNIEIK V +
Sbjct: 75 ALTLGELAQLDAGTWHSPAFAGEPVPTLAAIARYTQANGLMVNIEIKPVPGTEARTGAAV 134
Query: 121 ENNPERV--------MVSSFIIEALREYRKYDEETILGLLIDR 155
+ + + ++SSF EAL + + LL+D+
Sbjct: 135 ALDAQSLWAAAAVPPLLSSFSEEALAAAARVAPDLPRALLLDQ 177
>pir||G83271 probable phosphodiesterase PA2990 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949090|gb|AAG06378.1|AE004724_7 (AE004724) probable
phosphodiesterase [Pseudomonas aeruginosa]
Length = 240
Score = 70.2 bits (169), Expect = 2e-11
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 8 ILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISGR 67
++ GHRG + PENTL +F++ LE G + E D+ L++DG+ +++HD TL RTT G+
Sbjct: 3 LIYGHRGAKGEAPENTLASFQRCLEHGVNRCELDLHLSRDGELMVIHDPTLKRTTGRRGK 62
Query: 68 --QKDMTLDEIKKARVSG------QEVPTLEEAFSVLPEDALVNIEIKDVDAVKEVASIV 119
+ D AR G +P LEE F P + +E+K + ++
Sbjct: 63 VAEHDAATLATYDARKGGPGWVRPTPIPRLEELFEKCPFEHW-QLEVKSASRERAARTVT 121
Query: 120 -------KENNPERVMVSSFIIEALREYRKYDEETILGLLIDREEVVPMIPKLKEELNLW 172
+ N ++V V+S L+ + E GL+ + + P+ L
Sbjct: 122 RIRELTERFGNRDKVTVTSGSRTVLKALNELTPELSRGLVAEYAWLDPLKVAQHYGCALL 181
Query: 173 SVNVPMEAIPIIGFEKTVEAIKWARSLGLKVVLWTEND 210
++N + T E + A+ GL V +WT N+
Sbjct: 182 ALNWTL---------CTPERLLKAQRQGLHVSVWTVNE 210
>emb|CAC11773.1| (AL445064) hypothetical protein [Thermoplasma acidophilum]
Length = 232
Score = 70.2 bits (169), Expect = 2e-11
Identities = 48/157 (30%), Positives = 79/157 (49%), Gaps = 8/157 (5%)
Query: 3 ERDEVILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTT 62
E+ +++GHRG S ENT+ +F AG VE DV T DG ++ HD L+R
Sbjct: 5 EKYRFLVIGHRGLPSLCLENTVESFNATFNAGMPAVELDVQYTADGVPVVFHDFDLNRLA 64
Query: 63 NISGRQKDMTLDEIKKARV-SGQEVPTLEEAFSVLPE-DALVNIEIKDVDAVK-----EV 115
+ R D+ D++ K R+ SG +P L + S + + I+I+ D + +V
Sbjct: 65 GRNSRIGDLKWDDLSKIRLASGSTIPRLSDVLSAFENFNFFIEIKIEKFDNAERKLTDDV 124
Query: 116 ASIVKENN-PERVMVSSFIIEALREYRKYDEETILGL 151
A +V + + + V++ SF A+R R + + I GL
Sbjct: 125 ARMVIDRSMNDNVVMISFNASAMRYVRDHYDGIITGL 161
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.137 0.384
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91906764
Number of Sequences: 2977
Number of extensions: 3822758
Number of successful extensions: 12217
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 12184
Number of HSP's gapped (non-prelim): 30
length of query: 250
length of database: 189,106,746
effective HSP length: 57
effective length of query: 193
effective length of database: 154,992,987
effective search space: 29913646491
effective search space used: 29913646491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)