BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0203 (sucC-like) DE:SUCCINYL-COA SYNTHETASE, BETA SUBUNIT
related protein
(232 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75142 succinyl-coa synthetase, beta chain related protein ... 455 e-127
pir||T48662 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) beta... 436 e-122
pir||F71182 hypothetical protein PH1739 - Pyrococcus horikoshii ... 390 e-108
pir||D71189 hypothetical protein PH1788 - Pyrococcus horikoshii ... 261 5e-69
pir||D75149 hypothetical protein PAB2113 - Pyrococcus abyssi (st... 259 2e-68
gi|11498810 conserved hypothetical protein [Archaeoglobus fulgid... 236 2e-61
pir||T35770 hypothetical protein SC8A6.03c SC8A6.03c - Streptomy... 213 2e-54
emb|CAC12278.1| (AL445066) probable acetyl-CoA synthetase [Therm... 195 3e-49
gb|AAG19369.1| (AE005031) acetyl-CoA synthetase; Acs3 [Halobacte... 193 2e-48
gi|11498537 conserved hypothetical protein [Archaeoglobus fulgid... 189 3e-47
gi|11498792 conserved hypothetical protein [Archaeoglobus fulgid... 185 3e-46
gb|AAD44021.1|AF107206_1 (AF107206) acetyl-CoA synthetase [Giard... 185 5e-46
gi|11499522 conserved hypothetical protein [Archaeoglobus fulgid... 184 9e-46
gb|AAF88064.1|AF286346_1 (AF286346) acetyl-CoA synthetase [Entam... 175 3e-43
emb|CAA10043.1| (AJ012480) pimeloyl-CoA synthetase [Pseudomonas ... 172 3e-42
sp|Q58010|Y590_METJA HYPOTHETICAL PROTEIN MJ0590 >gi|2128020|pir... 172 4e-42
gi|11499106 conserved hypothetical protein [Archaeoglobus fulgid... 161 5e-39
pir||B83518 pimeloyl-CoA synthetase PA1017 [imported] - Pseudomo... 156 2e-37
gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfat... 124 8e-28
pir||H83024 hypothetical protein PA4978 [imported] - Pseudomonas... 120 1e-26
pir||T35878 hypothetical protein SC9B10.09 - Streptomyces coelic... 117 1e-25
pir||C82443 conserved hypothetical protein VCA0574 [imported] - ... 109 2e-23
sp|P76594|YFIQ_ECOLI HYPOTHETICAL 98.0 KD PROTEIN IN UNG-PSSA IN... 108 5e-23
dbj|BAA10925.1| (D64044) hypothetycal 67KD protein fragment in U... 81 1e-14
>pir||H75142 succinyl-coa synthetase, beta chain related protein PAB0203 -
Pyrococcus abyssi (strain Orsay)
>gi|5457733|emb|CAB49223.1| (AJ248284) SUCCINYL-COA
SYNTHETASE, BETA SUBUNIT related protein [Pyrococcus
abyssi]
Length = 232
Score = 455 bits (1158), Expect = e-127
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MDRIAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV 60
MDRIAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV
Sbjct: 1 MDRIAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV 60
Query: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLG 120
VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLG
Sbjct: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLG 120
Query: 121 KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGA 180
KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGA
Sbjct: 121 KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGA 180
Query: 181 RGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
RGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL
Sbjct: 181 RGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
>pir||T48662 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) beta chain
[validated] - Pyrococcus furiosus
>gi|5419968|emb|CAB46517.1| (AJ240062) acetyl-CoA
synthetase [Pyrococcus furiosus]
Length = 232
Score = 436 bits (1110), Expect = e-122
Identities = 217/232 (93%), Positives = 229/232 (98%)
Query: 1 MDRIAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV 60
MDR+AKAREIIEKAKAENRPLVEPEAKEILKLYGIP+PEFKVAR+EEEAVKFS EIGYPV
Sbjct: 1 MDRVAKAREIIEKAKAENRPLVEPEAKEILKLYGIPVPEFKVARNEEEAVKFSGEIGYPV 60
Query: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLG 120
VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIM+NAR YKPDADLWGVIIYRMLPLG
Sbjct: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMQNARNYKPDADLWGVIIYRMLPLG 120
Query: 121 KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGA 180
+EVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPI+KEDALEMI+EIKAYPILAGA
Sbjct: 121 REVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPITKEDALEMIREIKAYPILAGA 180
Query: 181 RGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
RGEKPVNI+ALADIIVKVGELALELPEI+E+DINPIFAYED A+AVDARM+L
Sbjct: 181 RGEKPVNIEALADIIVKVGELALELPEIKEIDINPIFAYEDSAIAVDARMIL 232
>pir||F71182 hypothetical protein PH1739 - Pyrococcus horikoshii
>gi|3258170|dbj|BAA30853.1| (AP000007) 212aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 212
Score = 390 bits (991), Expect = e-108
Identities = 197/204 (96%), Positives = 203/204 (98%)
Query: 1 MDRIAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV 60
MDRIA+AREIIEKAKAENR LVEPEAKEILKLYGIPIPEFKVAR+EEEAVKFSREIGYPV
Sbjct: 1 MDRIARAREIIEKAKAENRSLVEPEAKEILKLYGIPIPEFKVARNEEEAVKFSREIGYPV 60
Query: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLG 120
VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIY+MLPLG
Sbjct: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYKMLPLG 120
Query: 121 KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGA 180
+EVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISK+DALEMIKEIKAYPILAGA
Sbjct: 121 REVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKDDALEMIKEIKAYPILAGA 180
Query: 181 RGEKPVNIDALADIIVKVGELALE 204
RGEKPVNI+ALADIIVKVGELALE
Sbjct: 181 RGEKPVNIEALADIIVKVGELALE 204
>pir||D71189 hypothetical protein PH1788 - Pyrococcus horikoshii
>gi|3258224|dbj|BAA30907.1| (AP000007) 238aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 238
Score = 261 bits (660), Expect = 5e-69
Identities = 126/228 (55%), Positives = 183/228 (80%), Gaps = 3/228 (1%)
Query: 8 REIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSP 67
R I E K +VE EAK++LK YG+P+PE K+A+ +EA+++++EIGYPVV+K++SP
Sbjct: 7 RVIEEVLKQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVLKLMSP 66
Query: 68 QIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGM 127
QI+HKSDA V +NIKN+EE ++ + I ENA++Y+PDA++ GV++ ML G+EVI+G+
Sbjct: 67 QILHKSDAKVVMLNIKNEEELKKKWEEIHENAKKYRPDAEILGVLVAPMLKPGREVIIGV 126
Query: 128 IRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVN 187
DPQFG A+MFGLGGIFVEILKDV+FR+ PI+++DA +MI+EIKAYPILAGARGE+P +
Sbjct: 127 TEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMIQEIKAYPILAGARGEEPAD 186
Query: 188 IDALADIIVKVGELALELPE-IRELDINPIFAYE--DEAVAVDARMLL 232
IDA+ D+++KV +L +L + I+E+D+NP+F Y + AV VD+R++L
Sbjct: 187 IDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFVYNKGEGAVIVDSRIIL 234
>pir||D75149 hypothetical protein PAB2113 - Pyrococcus abyssi (strain Orsay)
>gi|5457785|emb|CAB49275.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 238
Score = 259 bits (655), Expect = 2e-68
Identities = 129/231 (55%), Positives = 185/231 (79%), Gaps = 4/231 (1%)
Query: 6 KAREIIEKAKAENRP-LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKI 64
+A ++IE + R +VE EAK++LK YG+P+PE K+A+ +EA+++++EIGYPVVMK+
Sbjct: 4 EAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKL 63
Query: 65 VSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVI 124
+SPQI+HKSDA V +NIK++EE ++ + I ENA++Y P+A++ GV+I ML G+EVI
Sbjct: 64 MSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVI 123
Query: 125 VGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEK 184
+G+ DPQFG A+MFGLGGIFVEILKDV+FR+ PI+++DA +MI EIKAYPILAGARGE+
Sbjct: 124 IGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEE 183
Query: 185 PVNIDALADIIVKVGELALELPE-IRELDINPIFAYE--DEAVAVDARMLL 232
P +IDA+ D+++KV +L EL + I+E+D+NPIF Y + AV VDAR++L
Sbjct: 184 PADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
>gi|11498810 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7448044|pir||B69401 conserved hypothetical protein
AF1211 - Archaeoglobus fulgidus
>gi|2649370|gb|AAB90033.1| (AE001020) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 685
Score = 236 bits (595), Expect = 2e-61
Identities = 111/227 (48%), Positives = 163/227 (70%), Gaps = 1/227 (0%)
Query: 6 KAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIV 65
KA EIIEK +V E +L+ YGI + + +AR+ +EA + IGYPVV+K+V
Sbjct: 456 KAEEIIEKLLESGGRVVGAEGLPVLEAYGIEVAPYGIARNVDEARDIAESIGYPVVLKVV 515
Query: 66 SPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIV 125
SP ++HKSD GGVK+N+ + + +AF I+ N P A + GV++ +M+ GKE+IV
Sbjct: 516 SPDVVHKSDVGGVKLNV-GENDLEKAFFEILSNVEGRMPKARIEGVLVQKMVDGGKELIV 574
Query: 126 GMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKP 185
GM RDPQFGP +MFG+GG++VE+LKDVSFR+API++ +A EM++E+KAY IL G RGEKP
Sbjct: 575 GMKRDPQFGPMIMFGMGGVYVEVLKDVSFRIAPITRREAHEMVREVKAYRILRGLRGEKP 634
Query: 186 VNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
+IDA+AD++++V +L+L+ PE+ E+D+NP+ +E VD RM+L
Sbjct: 635 ADIDAIADLLLRVSKLSLDHPEVLEMDLNPVKVFESGYAVVDFRMVL 681
>pir||T35770 hypothetical protein SC8A6.03c SC8A6.03c - Streptomyces coelicolor
>gi|3288603|emb|CAA19775.1| (AL031013) hypothetical
protein SC8A6.03c [Streptomyces coelicolor A3(2)]
Length = 714
Score = 213 bits (536), Expect = 2e-54
Identities = 108/232 (46%), Positives = 154/232 (65%), Gaps = 1/232 (0%)
Query: 2 DRIAKAREIIEKAKAENRP-LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV 60
DR+A+ R +++ + E R L PE K + YGI +P ++ARD +EAV + G PV
Sbjct: 4 DRLARVRGLLDAVRGEGRTALTAPEGKVLADAYGIAVPGEELARDVDEAVACAARFGGPV 63
Query: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLG 120
VMKIVSP I+HK+DAGGV + ++ + R AF I++NAR Y A + GV I +LP G
Sbjct: 64 VMKIVSPDILHKTDAGGVVVGVEGAADVRAAFCRIVDNARAYDASARIEGVQIQELLPQG 123
Query: 121 KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGA 180
+EVIVG + DP FG V FGLGG+ VE+LKDV+FR+AP+ ++AL M+ I+A +L G
Sbjct: 124 QEVIVGAVTDPTFGKVVAFGLGGVLVEVLKDVTFRLAPVDADEALSMLDSIRAAEVLRGV 183
Query: 181 RGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
RG+ V+ A+A+ I +V EL + PEI E+D+NP+ A + AVA D R++L
Sbjct: 184 RGQAGVDRWAVAEQIRRVSELVADFPEIAEVDLNPVIATPEGAVAADIRVIL 235
>emb|CAC12278.1| (AL445066) probable acetyl-CoA synthetase [Thermoplasma
acidophilum]
Length = 698
Score = 195 bits (491), Expect = 3e-49
Identities = 95/219 (43%), Positives = 146/219 (66%)
Query: 14 AKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKS 73
A+A + L E E+KEI + YGI + + ++A+ +E ++ YPVV+KI SP I+HK+
Sbjct: 480 AQAGVKSLNELESKEIFEAYGIKVNKTELAKSRDELKSLLKDFKYPVVLKIQSPDIVHKT 539
Query: 74 DAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQF 133
D GGV +N+K+ +EA +A+ TI+ N + P A + GV++ M E I+G + DP F
Sbjct: 540 DVGGVIVNVKDQDEALKAYDTIISNVKANAPQARIDGVVVEEMFRGDLETIIGTVNDPTF 599
Query: 134 GPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALAD 193
GP VMFGLGG VE+L+DVSFRVAP+ +++A +MI++ A ++ RG P+N+DA+ D
Sbjct: 600 GPTVMFGLGGTAVEVLEDVSFRVAPVCEKEAYDMIRDTVAGKMMQKFRGRGPLNVDAVVD 659
Query: 194 IIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
I++ LA + PEI+ +D NP+ ED A+ VDAR++L
Sbjct: 660 QIIRFSWLAYDHPEIKGIDANPMIVSEDGAIVVDARIML 698
>gb|AAG19369.1| (AE005031) acetyl-CoA synthetase; Acs3 [Halobacterium sp. NRC-1]
Length = 542
Score = 193 bits (485), Expect = 2e-48
Identities = 102/234 (43%), Positives = 151/234 (63%), Gaps = 4/234 (1%)
Query: 1 MDRIAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPV 60
+DR A AR+I+E A + EA ++L YGIP P V + A + +R+I V
Sbjct: 306 VDRDA-ARDILEDAADRGATRLGVEAMDLLDAYGIPTPTGDVVDSPDAARRVARDIEGDV 364
Query: 61 VMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPL- 119
VMKIVSP I+HKSD GGVK+ ++ D A +A+ ++ A Y+PDA + G+ + M+ +
Sbjct: 365 VMKIVSPDILHKSDIGGVKVGVETDAVA-DAYEDLITRATNYQPDATILGIQVQEMVDVD 423
Query: 120 -GKEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILA 178
G E I+GM RDPQFGP ++FGLGGIFVEIL+D S RVAP+S+ +A +MI ++ + P+L
Sbjct: 424 AGTETILGMNRDPQFGPLLLFGLGGIFVEILEDTSVRVAPVSEREAGDMIDDLDSAPLLR 483
Query: 179 GARGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
GARG P + A+ + I ++ +L + P I ELD+NP+ A D A A+D ++ +
Sbjct: 484 GARGRDPADEAAITEAIQRLSQLVTDFPAILELDVNPLLATGDSATALDVQLTI 537
>gi|11498537 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483066|pir||D69366 conserved hypothetical protein
AF0932 - Archaeoglobus fulgidus
>gi|2649664|gb|AAB90306.1| (AE001039) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 666
Score = 189 bits (474), Expect = 3e-47
Identities = 100/214 (46%), Positives = 147/214 (67%), Gaps = 9/214 (4%)
Query: 19 RPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGV 78
R L+E E+K +L+ YGI + EE+AVK ++EIG+PVVMK+ +IIHKSD GGV
Sbjct: 2 RLLLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVVMKVAGREIIHKSDVGGV 61
Query: 79 KINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQFGPAVM 138
+N+K+++E RE F+ +M P A+ GV I L G EVI+G+ + QFG M
Sbjct: 62 ILNVKSEDEVREVFQRLMSI-----PKAE--GVNIQPQLEKGIEVIIGVAENEQFGSVAM 114
Query: 139 FGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKV 198
FGLGG+FVE+LKDVSFR+ P+++ DA EM++E+K Y +L G RG K ++ A+ D+++K+
Sbjct: 115 FGLGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRGVKG-DVGAVVDLLLKL 173
Query: 199 GELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
E+ +E I E+D+NP+F YE AV VDAR+++
Sbjct: 174 NEV-VEKEGIVEMDLNPVFVYERGAVVVDARIVV 206
>gi|11498792 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483097|pir||G69398 conserved hypothetical protein
AF1192 - Archaeoglobus fulgidus
>gi|2649402|gb|AAB90053.1| (AE001022) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 664
Score = 185 bits (466), Expect = 3e-46
Identities = 96/212 (45%), Positives = 145/212 (68%), Gaps = 9/212 (4%)
Query: 21 LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGVKI 80
L+E E+K +L+ YGI + EE+AVK ++EIG+PVVMK+ +I+HKSD GGV +
Sbjct: 3 LLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVVMKVAGREIVHKSDVGGVIL 62
Query: 81 NIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQFGPAVMFG 140
N+K+++E RE F+ +M P A+ GV + L G EVIVG+ + QFG MFG
Sbjct: 63 NVKSEDEVREVFQRLMSI-----PKAE--GVNVQPQLEKGIEVIVGVAENEQFGSVAMFG 115
Query: 141 LGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKVGE 200
LGG+FVE+LKDVSFR+ P+++ DA EM++E+K Y +L G RG + ++ A+ D+++K+ E
Sbjct: 116 LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRGVRG-DVGAVVDLLLKLNE 174
Query: 201 LALELPEIRELDINPIFAYEDEAVAVDARMLL 232
+ +E I E+D+NP+F YE AV DAR+++
Sbjct: 175 V-VERESIVEMDLNPVFVYERGAVVADARIVV 205
>gb|AAD44021.1|AF107206_1 (AF107206) acetyl-CoA synthetase [Giardia intestinalis]
Length = 726
Score = 185 bits (464), Expect = 5e-46
Identities = 107/242 (44%), Positives = 151/242 (62%), Gaps = 15/242 (6%)
Query: 6 KAREIIEKAKAENRP-LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKI 64
+ ++II A+A+ R L+ E EI LYG+ P+ K+A +E EA F++E+ +PVVMKI
Sbjct: 483 RIKKIIAGARADGRTVLLSHETSEIFTLYGVNAPKTKLATNEAEAATFAKEVTFPVVMKI 542
Query: 65 VSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKP-DADLWGVIIYRMLPLGK-- 121
VSPQIIHKSD GGVK+NIK + EA AF+ IM NA + P A L GV I +M+ K
Sbjct: 543 VSPQIIHKSDCGGVKLNIKTEAEATAAFKEIMANAAKNGPKGAVLKGVEIQQMVDFSKYQ 602
Query: 122 ---EVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVA-PISKEDALEMIKEIKAYPIL 177
E+IVG+ RDP +GP +M G GGI+ +KDV+F +A +EDA +K+ K Y IL
Sbjct: 603 KTTEMIVGVNRDPTWGPMIMVGQGGIYANYIKDVAFDLAYKYDREDAEAQLKKTKIYEIL 662
Query: 178 AGARGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDE-------AVAVDARM 230
G RG+ +I L D +VK+ +L + EI ELD+NP+ +E++ AVD ++
Sbjct: 663 NGVRGQPRSDIKGLLDTMVKLAQLVNDFSEITELDMNPLLVFEEQKEGKNPGIAAVDVKI 722
Query: 231 LL 232
L
Sbjct: 723 TL 724
>gi|11499522 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483184|pir||A69492 conserved hypothetical protein
AF1938 - Archaeoglobus fulgidus
>gi|2648606|gb|AAB89317.1| (AE000970) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 673
Score = 184 bits (462), Expect = 9e-46
Identities = 97/212 (45%), Positives = 144/212 (67%), Gaps = 9/212 (4%)
Query: 21 LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGVKI 80
L+E E+K +L+ YGI + EE+AVK ++EIG+PVVMK+ +I+HKSD GGV +
Sbjct: 3 LLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVVMKVAGREIVHKSDVGGVIL 62
Query: 81 NIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQFGPAVMFG 140
N+K+++E RE F+ +M P A+ GV I L G EVIVG+ + QFG MFG
Sbjct: 63 NVKSEDEVREVFQRLMSI-----PKAE--GVNIQPQLEKGIEVIVGVAENEQFGSVAMFG 115
Query: 141 LGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKVGE 200
LGG+FVE+LKDVSFR+ P+++ DA EM++E+K Y +L G R K ++ A+ D+++K+ E
Sbjct: 116 LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRRVKG-DVGAVVDLLLKLNE 174
Query: 201 LALELPEIRELDINPIFAYEDEAVAVDARMLL 232
+ +E I E+D+NP+F YE AV DAR+++
Sbjct: 175 V-VERESIVEMDLNPVFVYERGAVVADARIVV 205
>gb|AAF88064.1|AF286346_1 (AF286346) acetyl-CoA synthetase [Entamoeba histolytica]
Length = 713
Score = 175 bits (440), Expect = 3e-43
Identities = 88/227 (38%), Positives = 142/227 (61%), Gaps = 1/227 (0%)
Query: 7 AREIIEKAKAENRP-LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIV 65
A+++I A+ R E E K + YGIPI A E+EAV + +IG PVVMKI+
Sbjct: 468 AKKLIADVVADGRTTFTEYEGKMMFSKYGIPIKGMAKASTEDEAVAEAMKIGTPVVMKIL 527
Query: 66 SPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIV 125
SP I+HK+D GGVK+ + +EE R+A+R IM + + KP+A + GV++ +M+ E I+
Sbjct: 528 SPDIMHKTDVGGVKVKLTTEEEIRKAYRDIMTSVKEKKPEARIHGVLLEKMVGFKYECII 587
Query: 126 GMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKP 185
G +DP FGP ++FG+GG+ VE+ KD + + PI ++A +I K +L G RG
Sbjct: 588 GCKKDPLFGPVIVFGMGGVTVELYKDTNIALPPIGLQEADRLIDGTKISKLLRGYRGMPA 647
Query: 186 VNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
+++ L I+V+ ++ ++ PEI E+DINP+ +E + +DA+++L
Sbjct: 648 CDVEGLKKILVQFSKMIMDFPEISEVDINPLAVSYEEFLVLDAKIVL 694
>emb|CAA10043.1| (AJ012480) pimeloyl-CoA synthetase [Pseudomonas mendocina]
Length = 711
Score = 172 bits (432), Expect = 3e-42
Identities = 87/197 (44%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 23 EPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGVKINI 82
E EAK++L GI +V + EA F+ +IG+PVV+KI S I+HKS+ GGV +N+
Sbjct: 490 EAEAKQLLARAGIESAPERVLKSAAEAAAFAEQIGFPVVLKIASADILHKSEIGGVLLNV 549
Query: 83 KNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQFGPAVMFGLG 142
+ + RE + ++E A + P A L GV++ R L G E +G+ RDPQFGP +FGLG
Sbjct: 550 GSAQAVREGYALLLERAAEHAPHARLDGVLVARQLQGGVECFMGIQRDPQFGPVAVFGLG 609
Query: 143 GIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKVGELA 202
GIFVE+LKDV FR P +A +MI+ IK P+L GARG +I AL+ ++ ++ + A
Sbjct: 610 GIFVEVLKDVVFRRCPFGVGEAEQMIRSIKGAPLLLGARGRPVTDIKALSRVLSQLSQFA 669
Query: 203 LEL-PEIRELDINPIFA 218
E P +R +D+NP+FA
Sbjct: 670 AEAGPRLRSVDLNPVFA 686
>sp|Q58010|Y590_METJA HYPOTHETICAL PROTEIN MJ0590 >gi|2128020|pir||F64373 hypothetical
protein homolog MJ0590 - Methanococcus jannaschii
>gi|1591298|gb|AAB98580.1| (U67507) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 704
Score = 172 bits (431), Expect = 4e-42
Identities = 93/229 (40%), Positives = 149/229 (64%), Gaps = 18/229 (7%)
Query: 8 REIIEKAKAENRPLV--------EPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYP 59
+E K EN+ ++ E AK++L +YG+P+P+ +A++E+EA+++ +++G
Sbjct: 468 KEEFIKITEENKEIIKELLSNPNEYTAKKLLSIYGLPVPKGYLAKNEDEALEYCKKLG-K 526
Query: 60 VVMKIVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPL 119
VMKIVSPQIIHK++AGGV IN KN +EAF+ ++ENA+ Y + +II +L
Sbjct: 527 CVMKIVSPQIIHKTEAGGVIINPKNP---KEAFKKLIENAKEYAKRMGIDNLIIEGVLVE 583
Query: 120 G------KEVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKA 173
E+I+G RD FG VM GLGG+FVE+LKDVSF ++PI+++ A EM++E+K+
Sbjct: 584 EFIEKDMMEIIIGAKRDDIFGSVVMVGLGGVFVEVLKDVSFGISPITRDFAHEMLRELKS 643
Query: 174 YPILAGARGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDE 222
Y +L G RG +I+ + D ++K+G EI+ELD+NP+F + ++
Sbjct: 644 YKVLEGVRGRPKRDINFIVDTLIKIGVFMDIHKEIKELDLNPVFVFNEK 692
>gi|11499106 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483131|pir||F69438 conserved hypothetical protein
AF1511 - Archaeoglobus fulgidus
>gi|2649053|gb|AAB89736.1| (AE000998) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 881
Score = 161 bits (404), Expect = 5e-39
Identities = 86/226 (38%), Positives = 135/226 (59%), Gaps = 9/226 (3%)
Query: 5 AKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKI 64
A+A II +A L PEA E+L+ +GI PE++ + EE + +++ G V +K
Sbjct: 659 ARAASIIAEAIGRREWLSPPEAFELLRCFGISFPEYEYVKTPEEVYEAAKKFGR-VALKA 717
Query: 65 VSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVI 124
+P +IHK++ G VK+N+ E +EA + K ++ G ++ RM G E+
Sbjct: 718 HAPNLIHKTEKGAVKVNLTPKEAKKEAEEML-------KRIGEVEGFLVQRM-SRGVEMF 769
Query: 125 VGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEK 184
VG+ DP FGP + G GGI VE++KDVS RV PI+++DA+EM++E+KAY +L G RG +
Sbjct: 770 VGVAEDPSFGPLITCGAGGILVELMKDVSVRVTPITRQDAVEMVRELKAYRLLEGYRGGE 829
Query: 185 PVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARM 230
N++A + I+++ L E PEI E+D NP+ A VDA++
Sbjct: 830 KANVEAFIETILRINYLIEEFPEIVEMDCNPVMVSSSGAEVVDAKI 875
>pir||B83518 pimeloyl-CoA synthetase PA1017 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9946928|gb|AAG04406.1|AE004534_4
(AE004534) pimeloyl-CoA synthetase [Pseudomonas
aeruginosa]
Length = 715
Score = 156 bits (390), Expect = 2e-37
Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
Query: 23 EPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGVKINI 82
E EAK +L GI V EEAV F+ IGYPVV+K+ S I HKS+ GGV + +
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPVVLKLASADIQHKSEIGGVLLGV 553
Query: 83 KNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQFGPAVMFGLG 142
+ + R F+ ++ A P A L GV++ R L G E +G+ RDP FGP +FGLG
Sbjct: 554 SDADAVRAGFQLLLRRAAEKAPQARLDGVLVARQLQGGVECFMGIQRDPLFGPVALFGLG 613
Query: 143 GIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKVGELA 202
GIFVE+L+DV FR P ++A MI+ I+ P+L GARG ++ ALA ++ + A
Sbjct: 614 GIFVEVLQDVVFRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRADVAALARLLSNLSRFA 673
Query: 203 LELPE-IRELDINPIFAYED--EAVAVDA 228
E E +R +D+NP+ A + A AVDA
Sbjct: 674 WEAGERLRSVDLNPVIALPEGQGAWAVDA 702
>gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 660
Score = 124 bits (309), Expect = 8e-28
Identities = 75/229 (32%), Positives = 139/229 (59%), Gaps = 18/229 (7%)
Query: 4 IAKAREIIEKAKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMK 63
I A E+++ K L + EA +++++YGI P++ +A +E EA + IGYPVVMK
Sbjct: 449 IEAALELVKGKKT----LKDFEALKLMEIYGIRTPKWGLANNENEAQNVADSIGYPVVMK 504
Query: 64 IVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEV 123
I +HK++ GV +N++ E+ ++ + + + R V+I + L G EV
Sbjct: 505 ISPDTPLHKTELKGVVVNVEK-EDVKKVYSELSKITSR---------VLIQQQLN-GLEV 553
Query: 124 IVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGE 183
+G ++DP FG ++ G GGI+VE+LK+V++ ++P+ +++A E++ E K + +L AR +
Sbjct: 554 FIGGLKDPVFGHVILIGSGGIYVEVLKNVAYALSPVYEDEAQELLVESKIHDML-NAR-K 611
Query: 184 KPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARMLL 232
+ + ++ I +V + ++L ++E+DINP+F E+ A AVD R++L
Sbjct: 612 RGYDESSIIRAITRVSRMIVDL-NVKEMDINPLFVNENGAFAVDVRIVL 659
>pir||H83024 hypothetical protein PA4978 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951261|gb|AAG08363.1|AE004910_10
(AE004910) hypothetical protein [Pseudomonas aeruginosa]
Length = 696
Score = 120 bits (298), Expect = 1e-26
Identities = 75/215 (34%), Positives = 126/215 (57%), Gaps = 5/215 (2%)
Query: 21 LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGVKI 80
L E ++K+ LK +G+P+P+ V +A + + ++G+P+V+K VS + HK++AGGV +
Sbjct: 481 LDEWQSKQALKPFGLPLPQ-GVLSTPGQAREAALDLGFPLVLKAVSAALPHKTEAGGVAL 539
Query: 81 NIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRML--PLGKEVIVGMIRDPQFGPAVM 138
++N+ A + E+ R+ P V++ RM PL E+IVG+ R+ FG A++
Sbjct: 540 GLRNEAALEAALFDMRESLARHAPQLVFERVLLERMAGAPLA-ELIVGVKREEGFGLALV 598
Query: 139 FGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKV 198
G GGI VE+L+D + P + + + +++ P+L+G RG V ++AL I V
Sbjct: 599 IGAGGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRPAVCMEALVAAIRAV 658
Query: 199 GELALELPE-IRELDINPIFAYEDEAVAVDARMLL 232
E A E E + ELD+NP+ A + A+AVDA + L
Sbjct: 659 AEFACEHAERLLELDVNPLLADAEGALAVDALIRL 693
>pir||T35878 hypothetical protein SC9B10.09 - Streptomyces coelicolor
>gi|2661695|emb|CAA15799.1| (AL009204) hypothetical
protein SC9B10.09 [Streptomyces coelicolor A3(2)]
Length = 1039
Score = 117 bits (291), Expect = 1e-25
Identities = 60/203 (29%), Positives = 113/203 (55%), Gaps = 4/203 (1%)
Query: 14 AKAENRPLVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKS 73
A+ + L E ++L YG+ + A ++A +R IGYPV +K +P + H++
Sbjct: 808 ARGQGLTLGSQETCDLLGRYGVHVHRALPAATPDDAAAAARTIGYPVALKATAPHLRHRA 867
Query: 74 DAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIRDPQF 133
D GGV++++ ++E+ R A+ + E + A+L V+ M P G + +V + DP
Sbjct: 868 DLGGVRLDLADEEQLRRAYAELTE---LFGKPAELRPVV-QGMAPRGVDTVVRAVIDPAA 923
Query: 134 GPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALAD 193
G + FGL G ++L D++ R+ P++ DA +I+ ++ P+L G RG PV+ AL +
Sbjct: 924 GAVLSFGLAGAATQLLGDMAHRLIPVTDRDATSLIRSVRTAPLLFGWRGSAPVDAAALEE 983
Query: 194 IIVKVGELALELPEIRELDINPI 216
++++V L + PE+ + + P+
Sbjct: 984 LLLRVSRLVDDHPEVVAVTLEPV 1006
>pir||C82443 conserved hypothetical protein VCA0574 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657984|gb|AAF96476.1|
(AE004388) conserved hypothetical protein [Vibrio
cholerae]
Length = 893
Score = 109 bits (271), Expect = 2e-23
Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Query: 29 ILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQIIHKSDAGGVKINIKNDEEA 88
+LK + + +A D EAV + IGYPV +K+ SP I HKSD GV +N++N E
Sbjct: 501 LLKCFNFNVLPTWIASDSTEAVHIAETIGYPVAVKLRSPDIAHKSDVQGVMLNLRNRIEV 560
Query: 89 REAFRTIMENARRYKPDADLWGVIIYRMLPL--GKEVIVGMIRDPQFGPAVMFGLGGIFV 146
A + I++ + P A++ G+++ M L G+E+ + + D FGP ++ G GG
Sbjct: 561 ANAAQAILDRTQLSYPSANIHGLLVQGMAKLAGGEELRIKVKTDATFGPVILLGQGGSEW 620
Query: 147 EILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVNIDALADIIVKVGELALELP 206
+ D + + P++ A +I + + P++I+ L++ +V++ ++ +E P
Sbjct: 621 DESLDAAAALPPLNMTLARYLIVRAIRSGKIRLQKLPVPIDIEGLSEFLVRISQMVVECP 680
Query: 207 EIRELDINPIFAYEDEAVAVDARMLL 232
++ ELDI+P+ + +DA ++L
Sbjct: 681 QVHELDIHPLLVNGSQFTILDANLVL 706
>sp|P76594|YFIQ_ECOLI HYPOTHETICAL 98.0 KD PROTEIN IN UNG-PSSA INTERGENIC REGION
>gi|7466397|pir||G65036 hypothetical protein b2584 -
Escherichia coli (strain K-12)
>gi|1788938|gb|AAC75637.1| (AE000344) orf, hypothetical
protein [Escherichia coli K12]
Length = 886
Score = 108 bits (268), Expect = 5e-23
Identities = 70/230 (30%), Positives = 124/230 (53%), Gaps = 5/230 (2%)
Query: 5 AKAREIIEKAKAENRPLVEP-EAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMK 63
A+A ++++A AE ++ E + IL+ YG+ +A D EAV + +IGYPV +K
Sbjct: 464 AEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALK 523
Query: 64 IVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPL--GK 121
+ SP I HKS+ GV + ++ E ++A I + + P A + G+++ M +
Sbjct: 524 LRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQ 583
Query: 122 EVIVGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEM-IKEIKAYPILAGA 180
E+ V + DP FGP +M G GG+ + P++ A + I+ IK+ I A +
Sbjct: 584 ELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARS 643
Query: 181 RGEKPVNIDALADIIVKVGELALELPEIRELDINPIFAYEDEAVAVDARM 230
+P+++ L+ ++V+V L ++ PEI+ LDI+P+ A E A+D +
Sbjct: 644 -ALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTL 692
>dbj|BAA10925.1| (D64044) hypothetycal 67KD protein fragment in UNG 3' region
[Escherichia coli]
Length = 612
Score = 81.1 bits (197), Expect = 1e-14
Identities = 47/143 (32%), Positives = 79/143 (54%), Gaps = 3/143 (2%)
Query: 5 AKAREIIEKAKAENRPLVEP-EAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMK 63
A+A ++++A AE ++ E + IL+ YG+ +A D EAV + +IGYPV +K
Sbjct: 464 AEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDYAEAVHIAEQIGYPVALK 523
Query: 64 IVSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPL--GK 121
+ SP I HKS+ GV + ++ E ++A I + + P A + G+++ M +
Sbjct: 524 LRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQ 583
Query: 122 EVIVGMIRDPQFGPAVMFGLGGI 144
E+ V + DP FGP +M G GG+
Sbjct: 584 ELRVVVEHDPVFGPLIMLGEGGV 606
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.142 0.393
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80921140
Number of Sequences: 2977
Number of extensions: 3349492
Number of successful extensions: 13511
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 13461
Number of HSP's gapped (non-prelim): 24
length of query: 232
length of database: 189,106,746
effective HSP length: 56
effective length of query: 176
effective length of database: 155,591,474
effective search space: 27384099424
effective search space used: 27384099424
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)