BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0216 327974 328609 212 !not a gene!
         (212 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||E71185 hypothetical protein PH1762 - Pyrococcus horikoshii ...   184  8e-46

>pir||E71185 hypothetical protein PH1762 - Pyrococcus horikoshii
           >gi|3258193|dbj|BAA30876.1| (AP000007) 126aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 126
           
 Score =  184 bits (462), Expect = 8e-46
 Identities = 94/126 (74%), Positives = 101/126 (79%)

Query: 1   MLGDLGLPLSLSLILLSIPLGLLHLGSFLNFGYLHHSCLRNLGFFLLSLALTLRSLLNSF 60
           MLGDLGLPLSLSLILLSIPLGLLHLGSFLN GYLHHSCLRNLGFFLLSLALT +SLLNS 
Sbjct: 1   MLGDLGLPLSLSLILLSIPLGLLHLGSFLNLGYLHHSCLRNLGFFLLSLALTFKSLLNSL 60

Query: 61  SSIYLTSERYGLSSLLNYVNTILEDSPIPLCDSCRLFDVCCRLTYGLFVYSLNYDFLSLN 120
           S IYLTSE Y LS  LNYVN+ILE S IP CD   L  +C  LT   F+  LNY FL+L+
Sbjct: 61  SFIYLTSESYWLSGFLNYVNSILEYSSIPFCDPSGLLYICSGLTGSFFINPLNYYFLTLD 120

Query: 121 LHGNSR 126
           LHG+ R
Sbjct: 121 LHGDPR 126


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.326    0.145    0.460 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84313710
Number of Sequences: 2977
Number of extensions: 3581648
Number of successful extensions: 10984
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10981
Number of HSP's gapped (non-prelim): 1
length of query: 212
length of database: 189,106,746
effective HSP length: 47
effective length of query: 165
effective length of database: 160,977,857
effective search space: 26561346405
effective search space used: 26561346405
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 163 (67.9 bits)