BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0227 (PAB0227) DE:Hypothetical protein
         (103 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||C75149 hypothetical protein PAB0227 - Pyrococcus abyssi (st...   199  9e-51
pir||C71189 hypothetical protein PH1787 - Pyrococcus horikoshii ...   131  2e-30

>pir||C75149 hypothetical protein PAB0227 - Pyrococcus abyssi (strain Orsay)
           >gi|5457784|emb|CAB49274.1| (AJ248284) hypothetical
           protein [Pyrococcus abyssi]
           Length = 103
           
 Score =  199 bits (500), Expect = 9e-51
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MLRTATYLLFLNGFLLLAYGKNAPVYLAFSVLSFILAFGVMKEVKFAIKVALVYSGVNFF 60
           MLRTATYLLFLNGFLLLAYGKNAPVYLAFSVLSFILAFGVMKEVKFAIKVALVYSGVNFF
Sbjct: 1   MLRTATYLLFLNGFLLLAYGKNAPVYLAFSVLSFILAFGVMKEVKFAIKVALVYSGVNFF 60

Query: 61  FALLFLMAGNLSSSIDAAISLLIVHDILGYIQKKYGEEVKLSA 103
           FALLFLMAGNLSSSIDAAISLLIVHDILGYIQKKYGEEVKLSA
Sbjct: 61  FALLFLMAGNLSSSIDAAISLLIVHDILGYIQKKYGEEVKLSA 103


>pir||C71189 hypothetical protein PH1787 - Pyrococcus horikoshii
           >gi|3258223|dbj|BAA30906.1| (AP000007) 103aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 103
           
 Score =  131 bits (327), Expect = 2e-30
 Identities = 66/101 (65%), Positives = 81/101 (79%), Gaps = 2/101 (1%)

Query: 1   MLRTATYLLFLNGFLLLAYG--KNAPVYLAFSVLSFILAFGVMKEVKFAIKVALVYSGVN 58
           MLR ATY L LNG LLLAY    ++ VYLAFS+ SF+LA G+  E++ AIK+ LVYSG+ 
Sbjct: 1   MLRIATYSLLLNGILLLAYYYINSSYVYLAFSIFSFMLALGIKNEIRLAIKITLVYSGIE 60

Query: 59  FFFALLFLMAGNLSSSIDAAISLLIVHDILGYIQKKYGEEV 99
           FF ALL LMAGN++SSIDA ISLLI+HDI+GY Q+KYG+EV
Sbjct: 61  FFLALLLLMAGNITSSIDAIISLLILHDIIGYAQRKYGKEV 101


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.331    0.145    0.401 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31241216
Number of Sequences: 2977
Number of extensions: 971032
Number of successful extensions: 3350
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3347
Number of HSP's gapped (non-prelim): 2
length of query: 103
length of database: 189,106,746
effective HSP length: 52
effective length of query: 51
effective length of database: 157,985,422
effective search space: 8057256522
effective search space used: 8057256522
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.9 bits)
S2: 159 (66.3 bits)