BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0248 (trkH) DE:TRK potassium uptake system protein (trkH)
(493 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75151 trk potassium uptake system protein (trkh) PAB0248 -... 970 0.0
pir||E71192 probable TRK system potassium uptake protein - Pyroc... 885 0.0
pir||A69036 TRK system potassium uptake protein TrkH - Methanoba... 345 6e-94
pir||D64485 TRK system potassium uptake protein homolog - Methan... 292 5e-78
pir||H72297 TRK system potassium uptake protein TrkH - Thermotog... 253 4e-66
gb|AAG19635.1| (AE005052) TRK potassium uptake system protein; T... 249 4e-65
gb|AAG19961.1| (AE005078) TRK potassium uptake system protein; T... 246 4e-64
gb|AAG20614.1| (AE005131) TRK potassium uptake system protein; T... 231 1e-59
pir||C72661 probable TRK system potassium uptake protein APE0715... 226 4e-58
gi|11498445 TRK potassium uptake system protein (trkH) [Archaeog... 222 9e-57
pir||E82372 potassium uptake protein TrkH VC0042 [imported] - Vi... 211 1e-53
pir||G82037 potassium uptake protein TrkH VC2756 [imported] - Vi... 210 2e-53
sp|P23849|TRKG_ECOLI TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKG >g... 210 4e-53
dbj|BAA31229.1| (D86411) TrkH [Vibrio alginolyticus] 208 1e-52
sp|P44843|TRKH_HAEIN TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKH >g... 208 2e-52
pir||E83245 potassium uptake protein TrkH PA3210 [imported] - Ps... 206 4e-52
gb|AAF33407.1| (AF233324) 98% identity with E. coli potassium up... 203 5e-51
sp|P21166|TRKH_ECOLI TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKH >g... 202 9e-51
pir||G81931 probable transmembrane potassium transporter NMA0859... 200 3e-50
pir||E64157 hypothetical protein HI0723 - Haemophilus influenzae... 190 3e-47
pir||B65190 potassium uptake protein trkH [validated] - Escheric... 185 1e-45
emb|CAA38502.1| (X54687) ORF401 [Escherichia coli] 184 2e-45
pir||JQ0754 hypothetical 46K protein (pepQ 3' region) - Escheric... 184 2e-45
pir||S30740 trkH protein - Escherichia coli >gi|148249|gb|AAA676... 184 2e-45
pir||B70007 Na+-transporting ATP synthase homolog yubG - Bacillu... 118 2e-25
pir||D81336 probable K+ uptake protein Cj1283 [imported] - Campy... 99 1e-19
dbj|BAB06813.1| (AP001517) Na+-transporting ATP synthase [Bacill... 96 9e-19
pir||C70190 K+ transport protein (ntpJ) homolog - Lyme disease s... 96 1e-18
pir||H70430 K+ transport protein homolog - Aquifex aeolicus >gi|... 95 2e-18
dbj|BAA32063.1| (D89592) KtrB [Vibrio alginolyticus] 92 1e-17
pir||H69862 Na+-transporting ATP synthase homolog ykrM - Bacillu... 90 4e-17
pir||F71360 probable K+ transport protein (ntpJ) - syphilis spir... 89 9e-17
dbj|BAB04317.1| (AP001509) Na+-transporting ATP synthase [Bacill... 89 9e-17
gb|AAD05261.1| (AF109909) putative protein [Bacillus megaterium] 82 2e-14
gb|AAC46143.1| (AF001974) putative TrkG [Thermoanaerobacter etha... 81 3e-14
gb|AAG00941.1|AF272977_1 (AF272977) NtpJ protein [Mycoplasma hyo... 72 1e-11
pir||S75455 Na+-ATPase chain J - Synechocystis sp. (strain PCC 6... 70 5e-11
>pir||G75151 trk potassium uptake system protein (trkh) PAB0248 - Pyrococcus
abyssi (strain Orsay) >gi|5457804|emb|CAB49294.1|
(AJ248284) TRK potassium uptake system protein (trkH)
[Pyrococcus abyssi]
Length = 493
Score = 970 bits (2481), Expect = 0.0
Identities = 493/493 (100%), Positives = 493/493 (100%)
Query: 1 MPKLRRFINVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASI 60
MPKLRRFINVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASI
Sbjct: 1 MPKLRRFINVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASI 60
Query: 61 LIGAILSRHIEHVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWT 120
LIGAILSRHIEHVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWT
Sbjct: 61 LIGAILSRHIEHVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWT 120
Query: 121 GTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERI 180
GTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERI
Sbjct: 121 GTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERI 180
Query: 181 LPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFH 240
LPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFH
Sbjct: 181 LPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFH 240
Query: 241 SLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLIS 300
SLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLIS
Sbjct: 241 SLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLIS 300
Query: 301 YGHFNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIK 360
YGHFNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIK
Sbjct: 301 YGHFNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIK 360
Query: 361 LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY
Sbjct: 361 LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
Query: 421 MMLRLGAKFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI 480
MMLRLGAKFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI
Sbjct: 421 MMLRLGAKFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI 480
Query: 481 VGVIMMLPRRTGK 493
VGVIMMLPRRTGK
Sbjct: 481 VGVIMMLPRRTGK 493
>pir||E71192 probable TRK system potassium uptake protein - Pyrococcus
horikoshii >gi|3258249|dbj|BAA30932.1| (AP000007) 496aa
long hypothetical TRK system potassium uptake protein
[Pyrococcus horikoshii]
Length = 496
Score = 885 bits (2261), Expect = 0.0
Identities = 433/490 (88%), Positives = 470/490 (95%)
Query: 1 MPKLRRFINVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASI 60
MPKLRRFINVSEDIFVIRNL GAILQGIGLAYL+PVLL WFYPEEIKFV+YFA PG ASI
Sbjct: 5 MPKLRRFINVSEDIFVIRNLIGAILQGIGLAYLVPVLLAWFYPEEIKFVIYFAIPGAASI 64
Query: 61 LIGAILSRHIEHVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWT 120
L+GA+LSRHIEH+EDVNLRQAM+ASAF WLFAS++SV+PFM+IAKMSFIDSLFETMSAWT
Sbjct: 65 LLGALLSRHIEHIEDVNLRQAMMASAFIWLFASLLSVIPFMAIAKMSFIDSLFETMSAWT 124
Query: 121 GTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERI 180
GTGLTMMSHLESYPK++LFWRAWMQWLGGIGIVLVALT+LIRPGVAAARLYRAEAR+ERI
Sbjct: 125 GTGLTMMSHLESYPKILLFWRAWMQWLGGIGIVLVALTVLIRPGVAAARLYRAEARTERI 184
Query: 181 LPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFH 240
LPNFVNTAKIIVQIYT LT++GAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYF+
Sbjct: 185 LPNFVNTAKIIVQIYTGLTILGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFN 244
Query: 241 SLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLIS 300
SL+IE ITVFLMIMGA NFTVHYK+F+++S+R+FF DIQVKTM YLL TIPL+ +SL+S
Sbjct: 245 SLAIETITVFLMIMGATNFTVHYKLFKNRSIRSFFMDIQVKTMLYLLGITIPLIALSLVS 304
Query: 301 YGHFNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIK 360
+GHFNPIRALRESIFHAVSAI+CTGF I NL NYPE DKV L+LLM+VGG AGSTAGGIK
Sbjct: 305 FGHFNPIRALRESIFHAVSAISCTGFSISNLGNYPEADKVLLTLLMIVGGGAGSTAGGIK 364
Query: 361 LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
LIRIALTFESLKWTIQQAILPKGA+IRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGT+Y
Sbjct: 365 LIRIALTFESLKWTIQQAILPKGAVIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTMY 424
Query: 421 MMLRLGAKFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI 480
MMLR+GA+FADALFESASAIGNVGLSVGITSPLLPPDIK+LLITLMWVGRLEIF TIVFI
Sbjct: 425 MMLRIGARFADALFESASAIGNVGLSVGITSPLLPPDIKILLITLMWVGRLEIFPTIVFI 484
Query: 481 VGVIMMLPRR 490
VGV+MMLPRR
Sbjct: 485 VGVLMMLPRR 494
>pir||A69036 TRK system potassium uptake protein TrkH - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622378|gb|AAB85753.1| (AE000893) TRK system
potassium uptake protein TrkH [Methanobacterium
thermoautotrophicum]
Length = 479
Score = 345 bits (876), Expect = 6e-94
Identities = 189/484 (39%), Positives = 290/484 (59%), Gaps = 16/484 (3%)
Query: 4 LRRFINVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIG 63
L R++ D+F + G I+QG+G +PV + Y E + F P S+ G
Sbjct: 3 LMRYVG-KRDLFTVGKYLGTIMQGVGFVVALPVFVAIIYGEGN--LQSFIIPAFISLGAG 59
Query: 64 AILSRHIEHVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTG 123
+L R++ V L+ M+ + WL+A ++ + +S + F ++ FE MSAWTG+G
Sbjct: 60 TVLKRYLPEECSVRLKHGMMVACLAWLWAGLIGSLIMISALNIDFTNAFFENMSAWTGSG 119
Query: 124 LTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERILPN 183
LT+ S +ES PK ILF R+ QW+GG+G+V+V + ILIRPG AA+RLY++EAR ERI P+
Sbjct: 120 LTIFSSVESLPKSILFLRSLEQWIGGLGVVIVVIGILIRPGTAASRLYKSEARDERIKPS 179
Query: 184 FVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLS 243
NT K I IY T++G LY + GM LFDA +++T L TGGMS +++IGY+HS +
Sbjct: 180 IANTVKTIWWIYITYTVLGIVLYGLTGMPLFDAINNTLTNLSTGGMSIKNMNIGYYHSAA 239
Query: 244 IEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGH 303
+ ++T+ LMI+G +F VHY++ + + + DIQ++ I + T+ + G
Sbjct: 240 VYLVTMLLMILGGTSFLVHYQLIKGRFF-SVLHDIQLQA----TVVFISIFTILAVYVGG 294
Query: 304 FNPIRALRESIFHAVSAITCTGFGIGN---LANYPEVDKVFLSLLMVVGGSAGSTAGGIK 360
P+ ESI+H +SA++CTG I + + +P KV L M++G +AGST G +K
Sbjct: 295 VAPL----ESIYHVISALSCTGSSISSTPQMVAWPAYFKVLLITCMLIGMAAGSTTGAVK 350
Query: 361 LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
+IR+ + + W I + + P+G+++ RK+ S+ EI+E + YF LLF T
Sbjct: 351 IIRVITVLKGVYWEIMRILAPEGSVMPRKISGKSVSDTEIREAGSYISLYFV-LLFFTWS 409
Query: 421 MMLRLGAKFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI 480
+++ G ++LFE+ASA GNVGLS+GITS LP K+ LI MW+GRLEI IV I
Sbjct: 410 VLVVYGYDPLNSLFEAASAQGNVGLSMGITSFNLPVVPKMALILSMWLGRLEIIPVIVLI 469
Query: 481 VGVI 484
G++
Sbjct: 470 RGLV 473
>pir||D64485 TRK system potassium uptake protein homolog - Methanococcus
jannaschii >gi|1592122|gb|AAB99495.1| (U67589) TRK
system potassium uptake protein (trkG) [Methanococcus
jannaschii]
Length = 474
Score = 292 bits (740), Expect = 5e-78
Identities = 169/470 (35%), Positives = 277/470 (57%), Gaps = 22/470 (4%)
Query: 12 EDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILSRHIE 71
+DI I ++ G I+Q IG+ L+P ++ +Y E L F PG+ + G +L R +
Sbjct: 9 KDIEGILHILGGIIQIIGIFTLVPCIVSVYYNENT--FLNFLIPGLFFSIFGFVLKRATK 66
Query: 72 HVEDVNLRQAMIASAFTWLFASVVSVVP-FMSIAKMSFIDSLFETMSAWTGTGLTMMSHL 130
+++ L M+ASA WL AS + +P ++SI S++D+++E+MSAWT TG+T++ ++
Sbjct: 67 P-KNLKLHHTMVASALAWLIASFIGAIPLYLSIDYFSYVDAVYESMSAWTTTGMTLIPNV 125
Query: 131 ESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERILPNFVNTAKI 190
E PK ILFWR++ QW+GG+GI++++ +L R G A LY +EAR ERI+P+ + T K
Sbjct: 126 EVLPKSILFWRSFQQWIGGVGILVLSALVLARSGTVAYLLYTSEARQERIMPSAIGTIKT 185
Query: 191 IVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITVF 250
I+ IY L T++G L Y++G+S +DA +MTG+ TGGMS + S Y I +I +
Sbjct: 186 IIWIYILYTILGVLLLYLSGLSFWDALNLTMTGISTGGMSISNYSFPYNDFAKIVMIGI- 244
Query: 251 LMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPIRAL 310
+M+ G ++F++H+K+ K +F DIQ K Y L T + + IS PI
Sbjct: 245 MMVGGVMSFSIHHKLLTGK----YFNDIQTK---YALIVTAFISII--ISIKDKVPI--- 292
Query: 311 RESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFES 370
+S+F VSA+T TGF N+ N + + LM++GG AG+T GG+K+IR + ++
Sbjct: 293 IDSLFTVVSAMTSTGFTTINVGNLSSLSLFLIIFLMLIGGGAGTTTGGVKIIRFLVILKA 352
Query: 371 LKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLL--FGTIYMMLRLGAK 428
L + I++ I PK A+I + + + + I+E + +F + L F T + + LG
Sbjct: 353 LLYEIKEIIYPKSAVIHEHLDDMDLNYRIIREAF---VVFFLYCLSSFLTALIFIALGYN 409
Query: 429 FADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIV 478
D++F++ S N+G+S+G+ + P K+ I MW+GRLEI +V
Sbjct: 410 PYDSIFDAVSFTSNIGISLGVVTLKTPVIGKIAGIIAMWIGRLEIIPVLV 459
>pir||H72297 TRK system potassium uptake protein TrkH - Thermotoga maritima
(strain MSB8) >gi|4981633|gb|AAD36165.1|AE001768_14
(AE001768) TRK system potassium uptake protein TrkH
[Thermotoga maritima]
Length = 495
Score = 253 bits (639), Expect = 4e-66
Identities = 165/485 (34%), Positives = 261/485 (53%), Gaps = 23/485 (4%)
Query: 22 GAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILSR--HIEHVEDVNLR 79
G +L L+P + V FYPEE ++ F P + S G +L + + V +
Sbjct: 16 GQLLIWFPAILLLPTIFVIFYPEEWIYIESFLVPSIISFASGVVLKKVSKLNETRVVGYQ 75
Query: 80 QAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILF 139
+ + TW A V+S +PF+ ++F ++FE S WT TGLTM +ES P V L
Sbjct: 76 EGAVIVVTTWCAAVVLSALPFVIEGLLNFHQAVFEATSGWTTTGLTMFPDVESLPHVFLV 135
Query: 140 WRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLT 199
WR+ MQ++GG G ++ L LI P A LY +E R + ILPN ++ K+I+ IY
Sbjct: 136 WRSVMQFIGGAGFAVIMLATLIGP--LGASLYSSEGRVDNILPNVTHSTKVIMVIYVAYA 193
Query: 200 LVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITVFLMIMGAVNF 259
G + ++ GM FDAF HS+T L TGG S + SIGY+ S+SIE+IT+ LM++G F
Sbjct: 194 AAGMFFLHMAGMPWFDAFNHSLTALATGGFSVKNASIGYYGSVSIEVITIVLMLLGGTGF 253
Query: 260 TVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGH--FNPIRALRESIFHA 317
+HY +++ FK +++ +TI + ++ L+ F+ +ALR +F
Sbjct: 254 GIHYTLWKGN-----FKAFVKNGEPWIMGSTIVIASLFLLRPAEKVFHE-KALRYVVFQV 307
Query: 318 VSAITCTGFGIGNLANYPEVDKV---FLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWT 374
VSAIT TGF +L + + + L+++M++GG STAGG+K R+ +T + + +
Sbjct: 308 VSAITGTGFSNADLVPWVTLFPIGVYLLTVIMMLGGMMDSTAGGLKQFRVFVTLKLIYRS 367
Query: 375 IQQAILPKGAIIRRKV--GEYEFSEDE--IQEVLGFTMTYFAFLLFGTIYMMLRLGAKFA 430
I + P+ + + V GE + D+ I+++ F Y L GT+ +M G
Sbjct: 368 IINFMGPRRKVEKIIVWKGENRKTIDDGIIKDMFVFFGVYALTYLVGTLILM-SYGYDPL 426
Query: 431 DALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLE---IFSTIVFIVGVIMML 487
++FE +SA+ VGLSVG+TSP LP + + M++GRLE +F IV I+ + +L
Sbjct: 427 VSMFEFSSAMNGVGLSVGLTSPNLPVGVIWTMTVGMFLGRLEFLVVFYAIVRIIRDVKIL 486
Query: 488 PRRTG 492
G
Sbjct: 487 LEERG 491
>gb|AAG19635.1| (AE005052) TRK potassium uptake system protein; TrkH1
[Halobacterium sp. NRC-1]
Length = 537
Score = 249 bits (630), Expect = 4e-65
Identities = 162/525 (30%), Positives = 254/525 (47%), Gaps = 63/525 (12%)
Query: 22 GAILQGIGLAYLIPVL--LVWFYPEEIKFVLYFAGPGVASILIGAILSRHIEHVEDVNLR 79
G +L+ + + VL LVW E V G+ +++G L R EH D
Sbjct: 13 GRMLEALAGLIFVSVLVPLVW---GEFWVVPAMVVSGLIPLVVGLTLRRTFEHAADPGRL 69
Query: 80 QAMIASAFTWLFASVVSVVPFMSIAKMSFID----------------------------- 110
M+ +A W + VPF+ A + +D
Sbjct: 70 HGMMIAASGWFLVAAFGSVPFLLAAWTAQLDPGMLDVPARFTVPGTRTFSTLAAFQNPLN 129
Query: 111 SLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARL 170
FE+MS +TGTGLTM + + P + +WR++++W+GG+G++++ IL RPG + L
Sbjct: 130 GFFESMSGFTGTGLTMADNEAALPHTLQWWRSFIEWVGGVGVIVLTTAILARPGSGSLTL 189
Query: 171 YRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMS 230
Y +EARSE+I P+ V+T + I I+ L T L +I GM ++DA H+MTGL TGG S
Sbjct: 190 YESEARSEKIHPSIVSTVRTIWWIFLLFTFFSILLLWIAGMPMWDAINHAMTGLATGGFS 249
Query: 231 SHDLSIGYFHSLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAAT 290
D SI + S +I+ + +M++G++ F +HY V + LRN + D+Q + +F A
Sbjct: 250 ITDNSIATYGSAAIDFALIPVMVLGSIAFPIHYLVLQG-DLRNLYTDLQTRWVFGFFALG 308
Query: 291 IPLMTVSLISYGHF-----------------NPIRALRESIFHAVSAITCTGFGIGNL-- 331
L+T L+ G++ + +R ++F VSA +CTGF
Sbjct: 309 TALLTAVLLQQGYYVTESVAVAGVVLHGSAATLFQTVRYALFQFVSAASCTGFQTAGALG 368
Query: 332 ANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQAILPKGAIIRRKVG 391
+ + ++ ++ MVVG +AGST GGIKLIR+ + + + I+ P A+ ++
Sbjct: 369 SGWTAPAQLTVAFGMVVGAAAGSTVGGIKLIRLLTLVKGILFRIRGVFYPSDAVRTFRLD 428
Query: 392 EYEFSE----DEIQEVLGFTMTYFAFLLFGTIYMMLRL-----GAKFADALFESASAIGN 442
S+ E +E T + FL ML + + LFE ASA GN
Sbjct: 429 GRALSDTEAAQEFEEAAIITFLWLVFLGVAAFVFMLAIPMGPDAYTVENVLFEVASAQGN 488
Query: 443 VGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFIVGVIMML 487
VGLS GIT P +P K + + MW+GRLEI +V + G+ L
Sbjct: 489 VGLSSGITGPGMPTVTKAMFLFNMWIGRLEIIPVLVLLRGLFSTL 533
>gb|AAG19961.1| (AE005078) TRK potassium uptake system protein; TrkH2
[Halobacterium sp. NRC-1]
Length = 558
Score = 246 bits (622), Expect = 4e-64
Identities = 163/542 (30%), Positives = 261/542 (48%), Gaps = 86/542 (15%)
Query: 16 VIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILSRHIEHVED 75
+ R++ G +L GL ++ F +E L F G S +G + R
Sbjct: 15 IARDVGGLVLIAAGLMSASVLVAAGF--QEWYAALGFLLAGGLSATVGGLARRRFADAPA 72
Query: 76 VNLRQAMIASAFTWLFASVVSVVPFM------------------------------SIAK 105
++ M+ +A W +VV +PF+ +++
Sbjct: 73 PKMKHGMVIAAGGWFAIAVVGALPFLFTAWLTPPAAMARFVPTDATWTAVSVGNTTTLSS 132
Query: 106 MSF----IDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILI 161
+++ + +LFE+MS WTG+GLTM H S P+ I +WR+ QW+GG+G+V++ ++IL
Sbjct: 133 LAYFRQPLHALFESMSGWTGSGLTMAIHEPSLPRSIQWWRSLTQWVGGVGVVVLTVSILA 192
Query: 162 RPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYI------NGMSL-- 213
RPG + LYR+EAR ++I P+ V+T + + ++ T+VG + ++ G +L
Sbjct: 193 RPGSGSYALYRSEAREKKIHPSVVSTVRTVWKLVVGYTVVGVAVLFVAIRASDYGAALPV 252
Query: 214 ----FDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITVFLMIMGAVNFTVHYKVFRDK 269
+ A H+MTGL TGG S D SI + + IE + +M+ GA+ F +HY++ D+
Sbjct: 253 WDAAWQALNHTMTGLTTGGFSVTDNSIATYDAPVIEAALLPIMVAGAIAFPIHYRLLADR 312
Query: 270 SLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNP--------------------IRA 309
D+Q + +F LL + ++ ++ P A
Sbjct: 313 DHGVLRGDLQTRWLFVLLGGGVVVLAAQNVAAVPVTPDAVTQWTPAIGDVPVLSPAQADA 372
Query: 310 LRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFE 369
R++ F VSA+TCTGF + N+ K+ + M +GG+AGST GGIK+IR
Sbjct: 373 ARDATFQWVSALTCTGFQSAPIGNWIAGGKILVVGAMTIGGAAGSTVGGIKIIRAYTAVR 432
Query: 370 SLKWTIQQAILPKGAIIRRKVG---------EYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
W + LP A++ ++ E EFSE I +L + LLF T
Sbjct: 433 GFIWQFSRVFLPSNAVVTARIDGRTLDRDAMEQEFSEAAIVALL------WVVLLFATSL 486
Query: 421 MMLRLGA---KFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTI 477
+++ L +ADALFE ASA GNVGLS GIT P + P + + + MW+GRLEI +
Sbjct: 487 VLVNLAGPSFSYADALFEVASAQGNVGLSSGITGPDMSPIAEAMFLFNMWIGRLEIIPVL 546
Query: 478 VF 479
VF
Sbjct: 547 VF 548
>gb|AAG20614.1| (AE005131) TRK potassium uptake system protein; TrkH3
[Halobacterium sp. NRC-1]
Length = 515
Score = 231 bits (583), Expect = 1e-59
Identities = 163/503 (32%), Positives = 251/503 (49%), Gaps = 47/503 (9%)
Query: 22 GAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPG--VASILIGAI---LSRHIEHVEDV 76
G ILQ + L V +V E +FA P V++ ++G I L+R
Sbjct: 13 GRILQAVSLLLAASVAVVAVNGE------FFAIPAFVVSAAVMGGIGTGLARLCRGARPP 66
Query: 77 NLRQAMIASAFTWLFASVVSVVPFMSIAK---------------------MSFIDSLFET 115
AM+ +A W V+ +PF+ +A + ++++FET
Sbjct: 67 KKPDAMVTAATAWAVVGVLGALPFVLVAWTMRLHLLPGLTPPLNATTRVFLHPLNAVFET 126
Query: 116 MSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAAR--LYRA 173
+S +TGTGLTM + P+ + +WR+ +W+GG+G++++ + IL R ++ LY +
Sbjct: 127 ISGFTGTGLTMATTEGDLPRALHWWRSLTEWVGGVGVIVLTVAILRRGDGSSGSYTLYES 186
Query: 174 EARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHD 233
EARSE+I P+ + T + I +++ LTL L + GM +DA H MTG+ TGG +
Sbjct: 187 EARSEKIHPSIITTVQEIWRLFVGLTLGAIALLLLAGMPPWDAINHGMTGIATGGFAVRA 246
Query: 234 LSIGYFHSLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPL 293
SIG ++S +IE TV +MI G++ F VHY +F LRN + D+Q + + A +
Sbjct: 247 GSIGAYNSPAIEYATVPIMIAGSIAFPVHYLLFTG-DLRNVYADLQTRWVVAWFAVGAAV 305
Query: 294 MTVSLISYGHFNPIRA-LRESIFHAVSAITCTGFGIGNLANYPE-----VDKVFLSLLMV 347
++ L G ++ + A R +F VSA + TGFG + E +F L M+
Sbjct: 306 LSALLFYTGQYDSLAASFRIGLFQFVSATSNTGFGTTTIGRGTERVWQTGPTLFACLGML 365
Query: 348 VGGSAGSTAGGIKLIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQ----EV 403
G +AGST GIKLIR+ + W I+ P AI ++G+ + SE + Q E
Sbjct: 366 TGAAAGSTVSGIKLIRVITLIKGTAWQIRDVFRPASAIRSLRIGDRKLSEHQAQREYAEA 425
Query: 404 LGFTMTYFAFLLFGTIYMMLRLGAK--FADALFESASAIGNVGLSVGITSPLLPPDIKVL 461
+ + AFL G ++ L + LF+ SA NVGL GITSP +P K +
Sbjct: 426 TLVFVLWLAFLAIGVAVLLAALSPQHPLEYVLFDVMSAQSNVGLDAGITSPGMPALAKGM 485
Query: 462 LITLMWVGRLEIFSTIVFIVGVI 484
LI MWVGRLEI V I V+
Sbjct: 486 LIINMWVGRLEIIPIAVLISAVL 508
>pir||C72661 probable TRK system potassium uptake protein APE0715 - Aeropyrum
pernix (strain K1) >gi|5104376|dbj|BAA79691.1|
(AP000060) 519aa long hypothetical TRK system potassium
uptake protein [Aeropyrum pernix]
Length = 519
Score = 226 bits (571), Expect = 4e-58
Identities = 141/460 (30%), Positives = 241/460 (51%), Gaps = 37/460 (8%)
Query: 56 GVASILIGAILSRHIEHVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFET 115
GV +L+G +LSR + + A+ + TWL + S I + ++D+L ET
Sbjct: 73 GVVLVLVGLLLSRAPGGL--LGKGDAVFITVATWLSVPLFSAALMSEILDIPYVDALLET 130
Query: 116 MSAWTGTGLTMMSHLES-----------YPKVILFWRAWMQWLGGIGIVLVALTILIRPG 164
++ WT TGL++++ ES P+ + WR+ +QW+GG+GIV+ + L RPG
Sbjct: 131 VAGWTTTGLSILTGAESSSGGYVPSVDEIPESVKLWRSMLQWVGGVGIVVFTVAFLARPG 190
Query: 165 VAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGL 224
++AA LY AE R ER+ + +A + +Y + TL+GA + Y++GMSL DA HSMT +
Sbjct: 191 ISAAALYIAEGRFERLEASLKASAIRMTLVYMVYTLLGALIIYLSGMSLSDAIQHSMTAI 250
Query: 225 GTGGMSSHDLSIGYFH-SLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTM 283
T G S+H S+G++ ++ T+ + +GA++F V D +R +
Sbjct: 251 STAGFSTHADSVGFYKGDYAVYASTLLVSFLGALSF-----VDLDNIMRLRLGRVLRSVE 305
Query: 284 FYLLAATIPLMTVSLISYGHFNPIR----ALRESIFHAVSAITCTGFGIGNLANYPEVDK 339
F ++A L + + + +P+ L ++I+++VS GF +L + K
Sbjct: 306 FRVIAGLTALSAAAAAAVWYIDPVMRSSYTLADTIYNSVSGYITVGFSTASLEGASDSYK 365
Query: 340 VFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDE 399
+ ++ L ++GGSA STAGGIK++R+A+ ++L + + P + + +G +ED
Sbjct: 366 LLIAALGLIGGSAFSTAGGIKVLRLAIALKTLDVETTRILKPSSYVPKNLIGGRRLTEDM 425
Query: 400 IQEVLGFTMTYFAFLLFGTIYMMLRLGA--------KFADALFESASAIGNVGLSVGITS 451
++ L + F T+ ++L L A D +F+ SA+ N+GLS G+TS
Sbjct: 426 VKRSLA------VIIAFATVEILLGLTAVALYSDIYPTVDIIFDVTSALANIGLSTGVTS 479
Query: 452 PLLPPDIKVLLITLMWVGRLEIFSTIVFIVGVIMMLPRRT 491
P P +KV+LI M +GRLEI IV ++ + RT
Sbjct: 480 PEAPTGLKVILIAGMLLGRLEILPYIVAAKYLVESVRART 519
>gi|11498445 TRK potassium uptake system protein (trkH) [Archaeoglobus fulgidus]
>gi|7449656|pir||G69354 TRK potassium uptake system
protein (trkH) homolog - Archaeoglobus fulgidus
>gi|2649764|gb|AAB90400.1| (AE001046) TRK potassium
uptake system protein (trkH) [Archaeoglobus fulgidus]
Length = 478
Score = 222 bits (559), Expect = 9e-57
Identities = 142/475 (29%), Positives = 246/475 (50%), Gaps = 24/475 (5%)
Query: 19 NLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILSRHIE---HVED 75
++ G +L ++++P++ + E L P S+L+GA+L I+ +
Sbjct: 8 SILGKLLMLFSFSFILPLIAAHVFEEPYHPFLI---PAALSLLVGAVLGYGIKTESEFDS 64
Query: 76 VNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPK 135
+ +++ A WLF S+ +P++ I +S +D+ FE+MS +T TG ++++ E PK
Sbjct: 65 LRHKESFAIVALIWLFMSIFGSIPYI-IFGISPVDAFFESMSGFTTTGASVLTP-EELPK 122
Query: 136 VILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAE---ARSERILPNFVNTAKIIV 192
+L WR+ QW+GG+GI+++ L I + L++AE ++ P +TA +
Sbjct: 123 SLLLWRSLTQWIGGMGIIVLFLAIFPNVAKRSTVLFQAEYPGVSLSKLKPRIRDTALSLY 182
Query: 193 QIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITVFLM 252
++Y LLT+ L Y G+SLFDA H+ T L TGG S+H SI +F + +E + F
Sbjct: 183 KVYLLLTIAEVALLYALGLSLFDAINHTFTTLSTGGYSTHSESIAFFKDVRVEAVVAFFA 242
Query: 253 IMGAVNFTVHYKVFRDKSLRNFFKDIQVKT-MFYLLAATIPLMTVSLISYGHFNPIRALR 311
+G NF + Y + K + F++ + + + +L A++ + V+L Y F +LR
Sbjct: 243 FLGGANFALIYFLLSGKPV--IFRNTEFRAYVCFLALASVVIAAVNLDRYSIF---ESLR 297
Query: 312 ESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESL 371
SIF AVS +T TGF + + + K+ L +LM +GGS+GST GGIK+IRI L +
Sbjct: 298 YSIFQAVSIMTTTGFTTADFDAWSDSAKLILVVLMFIGGSSGSTGGGIKVIRIYLLIKYA 357
Query: 372 KWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKFAD 431
I +A P+ + K ++ + ++ F + Y +I + L G
Sbjct: 358 VHQILRAAEPR-TVRAVKFEGRAIKKEILDDIAAFFVLYILIFAVSSILVSLS-GYDIVT 415
Query: 432 ALFESASAIGNVGLSVGITSPL-----LPPDIKVLLITLMWVGRLEIFSTIVFIV 481
++ +A+ +GNVG +G+ P K+LL MW+GRLEIF+ + +
Sbjct: 416 SISATAATLGNVGPGLGLAGAAENYASFPSLTKILLAVNMWIGRLEIFTVVSLFI 470
>pir||E82372 potassium uptake protein TrkH VC0042 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9654435|gb|AAF93220.1|
(AE004095) potassium uptake protein TrkH [Vibrio
cholerae]
Length = 481
Score = 211 bits (532), Expect = 1e-53
Identities = 152/483 (31%), Positives = 247/483 (50%), Gaps = 24/483 (4%)
Query: 8 INVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILS 67
+N+ F+I G +L + L +P L+ +F L FA + + L+ A L
Sbjct: 2 LNLRPITFII----GLVLSKLALFMYVPTLVAFFTGSG--GFLDFAQAVIITHLV-AFLC 54
Query: 68 RHIEHVED--VNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLT 125
I E +N+R + ++ W AS + +PF+ I +SF D+ FETMS T TG T
Sbjct: 55 LSIGRTEHFRLNVRDMFLITSLVWTIASAFAALPFVFINHISFTDAYFETMSGLTTTGST 114
Query: 126 MMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEAR--SERILPN 183
++S L+ P IL WR+ +QWLGG+G +++A+ +L V +L++ E+ S++ P
Sbjct: 115 VLSGLDDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSDWSDKSSPR 174
Query: 184 FVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLS 243
AK IV +Y +LT + Y GM+ F+A H+ T L TGG S+ D S+ F +
Sbjct: 175 AKTVAKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRFSHGA 234
Query: 244 IEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGH 303
+ T+F M +G + F + + R +S R KD QV+ F+L + L+ L
Sbjct: 235 HWVGTLF-MFLGGLPFLLFVQALRKQSARALLKDEQVRGFFWLFMISSLLVAGWLWLKND 293
Query: 304 FNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIR 363
+ + ALR S+F+ VS +T TG+G+ + + + + L++ G +GST+GGIK+ R
Sbjct: 294 YAILDALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKVFR 353
Query: 364 IALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYF--AFLLFGTIYM 421
+ LK + I P G I+R + +E+ I+ V+ F +T+F +L G +
Sbjct: 354 FQIAMALLKKQLLNLIHPSGIFIQR-YNKRPVNEEIIRSVVAFGLTFFITIVVLAGALSA 412
Query: 422 MLRLGAKFADALFESASAIGNVGLSVG-ITSPL-----LPPDIKVLLITLMWVGRLEIFS 475
M G ++ + +A+ NVG +G I P LP K LL M +GRLEI +
Sbjct: 413 M---GLDSVTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILT 469
Query: 476 TIV 478
+V
Sbjct: 470 ILV 472
>pir||G82037 potassium uptake protein TrkH VC2756 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657356|gb|AAF95895.1|
(AE004341) potassium uptake protein TrkH [Vibrio
cholerae]
Length = 485
Score = 210 bits (530), Expect = 2e-53
Identities = 142/481 (29%), Positives = 240/481 (49%), Gaps = 25/481 (5%)
Query: 17 IRNLSGAILQGIGLAYLIPVLLVWFYPEE--IKFVLYFAGPGVASILIGAIL---SRHIE 71
I + G +L ++ L P L+ Y + + FV F +L G + +RH +
Sbjct: 6 IIRIVGLLLALFSVSMLAPALVALIYRDGAGVPFVSTF----FVLLLCGGLFWFPNRHHK 61
Query: 72 HVEDVNLRQAMIASAFTWLFASVVSVVPFMSIA--KMSFIDSLFETMSAWTGTGLTMMSH 129
H ++ R + W +PF+ A +S D+ FE+ SA T TG T++
Sbjct: 62 H--ELKARDGFLIVVLFWTVIGSAGALPFLLAADPNISVTDAFFESFSALTTTGATVIVG 119
Query: 130 LESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAE----ARSERILPNFV 185
L+ PK ILF+R ++QW GG+GI+++A+ IL G+ +LYRAE + ++ P
Sbjct: 120 LDELPKAILFYRQFLQWFGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDTKVTPRIA 179
Query: 186 NTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE 245
TAK + IY LT+ A +++ GMSLFDA HS + + GG S+HD S+GYF S +I
Sbjct: 180 ETAKALWYIYLSLTIACASAFWLAGMSLFDAICHSFSTIAIGGFSTHDASMGYFDSYAIN 239
Query: 246 IITVFLMIMGAVNFTVHYKVFRDKSL--RNFFKDIQVKTMFYLLAATIPLMTVSLISYGH 303
+ITV +++ + NFT+HY F + + +++D + + F + + L+ +
Sbjct: 240 LITVVFLLISSCNFTLHYAAFATGGVHPKYYWRDPEFRAFFVIQVLLFVICFSVLLKHHS 299
Query: 304 FNPI-RALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLI 362
++ +A +++F VS T GF +++P V L +GG AGST GG+K+I
Sbjct: 300 YDSFYQAFDQALFQTVSISTTAGFTTTGFSDWPLFLPVLLLFSSFIGGCAGSTGGGMKVI 359
Query: 363 RIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMM 422
R+ L +++ + P+ AI K+G S+ + V GF Y A + + +
Sbjct: 360 RVLLLTLQGAREMKRLVHPR-AIYPIKLGGRALSQRVVDAVWGFFSAY-ALVFVVCMLAL 417
Query: 423 LRLGAKFADALFESASAIGNVGLSVG---ITSPLLPPDIKVLLITLMWVGRLEIFSTIVF 479
+ G A A+ + N+G +G + + K +LI M GRLEIF+ ++
Sbjct: 418 IATGMDELSAFSAVAATLNNLGPGLGEVAVHFADVNDKAKWILIASMLFGRLEIFTLLIL 477
Query: 480 I 480
+
Sbjct: 478 L 478
>sp|P23849|TRKG_ECOLI TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKG >gi|96316|pir||A39408 trk
system potassium uptake protein trkG - Escherichia coli
>gi|43140|emb|CAA40103.1| (X56783) TrkG protein
[Escherichia coli] >gi|1742227|dbj|BAA14960.1| (D90774)
Potassium transport protein TrkG [Escherichia coli]
>gi|1787626|gb|AAC74445.1| (AE000233) trk system
potassium uptake; part of Rac prophage [Escherichia coli
K12]
Length = 485
Score = 210 bits (528), Expect = 4e-53
Identities = 136/476 (28%), Positives = 242/476 (50%), Gaps = 12/476 (2%)
Query: 16 VIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILSRHIEHVED 75
V+ ++ G ++ L+ L P+++ FY E+ FV + I GA + ++
Sbjct: 8 VVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFITFVIFFCIGGGAWYTTKKSGIQ- 66
Query: 76 VNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLESY 133
+ R I W+ SV+S P S ++FID+LFE +S T TG T++ + S
Sbjct: 67 LRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFIDALFEGVSGITTTGATVIDDVSSL 126
Query: 134 PKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFVNTAK 189
P+ L++R+ + ++GG+G++++A+ +L G+ A+LY++E + +++ P +T++
Sbjct: 127 PRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGGAKLYQSEMPGPFKDDKLTPRLADTSR 186
Query: 190 IIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITV 249
+ Y+LL + Y + GM LFDA H ++ + GG S+H SIGYF++ +E++
Sbjct: 187 TLWITYSLLGIACIVCYRLAGMPLFDAICHGISTVSLGGFSTHSESIGYFNNYLVELVAG 246
Query: 250 FLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPIRA 309
++ A NFT+ Y V K+++ +DI+++ + I + + + G ++ +
Sbjct: 247 SFSLLSAFNFTLWYIVISRKTIKPLIRDIELRFFLLIALGVIIVTSFQVWHIGMYDLHGS 306
Query: 310 LRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFE 369
S F A S +T G + A++P VFL L GG GST GGIK +R + F+
Sbjct: 307 FIHSFFLASSMLTDNGLATQDYASWPTHTIVFLLLSSFFGGCIGSTCGGIKSLRFLILFK 366
Query: 370 SLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKF 429
K I Q P+ A++ VG ++ ++ V F Y F +F I ++ +G F
Sbjct: 367 QSKHEINQLSHPR-ALLSVNVGGKIVTDRVMRSVWSFFFLYTLFTVF-FILVLNGMGYDF 424
Query: 430 ADALFESASAIGNVGLSVGITSP---LLPPDIKVLLITLMWVGRLEIFSTIVFIVG 482
+ A+ I N+GL G T+ +L K L+ M +GRLEI+ I+ G
Sbjct: 425 LTSFATVAACINNMGLGFGATASSFGVLNDIAKCLMCIAMILGRLEIYPVIILFSG 480
>dbj|BAA31229.1| (D86411) TrkH [Vibrio alginolyticus]
Length = 481
Score = 208 bits (524), Expect = 1e-52
Identities = 142/489 (29%), Positives = 244/489 (49%), Gaps = 36/489 (7%)
Query: 8 INVSEDIFVIRNLSGAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASILIGAILS 67
+N+ +FVI G +L + L +P L V +F G G A++
Sbjct: 2 VNLRPVLFVI----GLVLSKLALFMYVPTL-----------VAFFTGTGGFLDFAQAVVI 46
Query: 68 RHIEHVE----------DVNLRQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMS 117
H+ +++R + ++ W AS + +PF+ I +SF D+ FETMS
Sbjct: 47 THLAAFICLTIGRTAKFKLSVRDMFLITSLVWTIASAFAALPFVFINHISFTDAYFETMS 106
Query: 118 AWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEAR- 176
T TG T++S L++ IL WR+ +QWLGGIG +++A+ +L V +L++ E+
Sbjct: 107 GITTTGSTVLSGLDNMAPSILLWRSILQWLGGIGFIVMAVAVLPMLNVGGMKLFQTESSD 166
Query: 177 -SERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLS 235
S++ P AK IV +Y +LT + Y + GM+LF+A H+ T L TGG S+ D S
Sbjct: 167 WSDKSSPRAKTVAKNIVAVYLMLTGLCIVGYLVTGMNLFEAINHAFTTLSTGGYSTSDGS 226
Query: 236 IGYFHSLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMT 295
+ +F + + + T F M +G + F + R + + D QV+ YL + +++
Sbjct: 227 MNHFSNGAHWVATTF-MFLGGLPFLLFIAALRKRRIDVLVNDAQVRGFAYLFVFSSLVIS 285
Query: 296 VSLISYGHFNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGST 355
L+ + + ALR S+F+ VS +T TGFG+ + + + + LM+ G +GST
Sbjct: 286 AWLVIRDGYTILDALRVSMFNIVSVVTTTGFGLEDFTAWGALPTTLFAFLMMAGACSGST 345
Query: 356 AGGIKLIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLL 415
+GGIK+ R + L + + I P G ++R + ++D ++ V+ F + +F ++
Sbjct: 346 SGGIKIFRFQIAMTLLNKQMMKLIHPSGVFVQR-YNQRPVNDDIVRSVVAFGLMFFITII 404
Query: 416 FGTIYMMLRLGAKFADALFESASAIGNVGLSVG-ITSPL-----LPPDIKVLLITLMWVG 469
F + LG ++ + +A+ NVG +G + P LP K LL M +G
Sbjct: 405 F-IAGCLSALGLDPITSISGAITAVANVGPGMGSVIGPTGNFAPLPDTAKWLLSFGMLMG 463
Query: 470 RLEIFSTIV 478
RLEI + +V
Sbjct: 464 RLEILTILV 472
>sp|P44843|TRKH_HAEIN TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKH >gi|3212204|gb|AAC22381.1|
(U32755) TRK system potassium uptake protein (trkH)
[Haemophilus influenzae Rd]
Length = 487
Score = 208 bits (523), Expect = 2e-52
Identities = 125/424 (29%), Positives = 219/424 (51%), Gaps = 16/424 (3%)
Query: 72 HVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAK--MSFIDSLFETMSAWTGTGLTMMSH 129
H +++ R + WL ++ +P + ++ ++FE S T TG T+M+
Sbjct: 60 HKQELRSRDGFLIVVAFWLVLGSLATLPLLLFDSPHLTIASAVFEAFSGLTTTGATVMTG 119
Query: 130 LESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFV 185
L++ PK ILF+R ++QWLGG+GI+++A+ I+ G+ +LYRAE+ + ++ LP
Sbjct: 120 LDNLPKSILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGTQLYRAESSGPLKDQKSLPKIS 179
Query: 186 NTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE 245
AK + IY LT++ A Y+++GM+LFDA HS + + GG S+HD SIGYF+ SI
Sbjct: 180 EVAKALWIIYASLTVLCAIAYWLSGMNLFDAIGHSFSTISNGGFSTHDASIGYFNQASIY 239
Query: 246 IITVFLMIMGAVNFTVHYKVF----RDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISY 301
+T M++G VNF++H F + RN++KD + + + I ++++SL Y
Sbjct: 240 WVTTIFMLIGGVNFSLHISAFLALGKRNIWRNYWKDPEFRFFLTMQIIFIGIVSLSLYGY 299
Query: 302 GHFNPI-RALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIK 360
G + I A+ + S G+ I ++ N P + L + V+GG GST GG+K
Sbjct: 300 GLVSDINEAVTKGALQLTSMSMTAGYTIFDIDNLPPFIGLLLVISAVIGGCGGSTTGGLK 359
Query: 361 LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
IR + ++ + + I P + ++G+ + I+ + F F + +G ++
Sbjct: 360 AIRTLILWKQIDRELHSLIHP-NLVQPIRIGKNRLAPRMIESIWAF-FIIFILVYWGCVF 417
Query: 421 MMLRLGAKFADALFESASAIGNVGLSVGITSPL---LPPDIKVLLITLMWVGRLEIFSTI 477
++ G DA+ + + N G +G +P K++ M GRLE+FS I
Sbjct: 418 AVILCGMNTFDAMGAVFATLTNAGPGLGFIHESFIGVPESAKLVFSFAMICGRLEMFSLI 477
Query: 478 VFIV 481
V +
Sbjct: 478 VLFI 481
>pir||E83245 potassium uptake protein TrkH PA3210 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949330|gb|AAG06598.1|AE004744_13 (AE004744)
potassium uptake protein TrkH [Pseudomonas aeruginosa]
Length = 484
Score = 206 bits (519), Expect = 4e-52
Identities = 140/469 (29%), Positives = 240/469 (50%), Gaps = 15/469 (3%)
Query: 22 GAILQGIGLAYLIPVLLVWFYPEEIKFVLYFAGPGVASIL--IGAILSRHIEHVEDVNLR 79
G L + + L+P+L + + + + + F VA+ + +G +L EHV + R
Sbjct: 14 GIFLITLAASMLVPILTMLAF-DRTEGIQAFIWSSVATFVTGLGLVLPGRPEHVH-LRPR 71
Query: 80 QAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILF 139
+ + +W+ + + +PF+ +S+ D+ FE+MS T TG T++S L+ IL
Sbjct: 72 DMYMLTVSSWVLVCIFAALPFVLQQHISYTDAFFESMSGITATGSTVLSGLDDMSPGILI 131
Query: 140 WRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA--RSERILPNFVNTAKIIVQIYTL 197
WR+ + WLGGIG + +A+ IL + RL++ E+ RSE++LP AK IV Y
Sbjct: 132 WRSLLHWLGGIGFIAMAVAILPMLRIGGMRLFQTESSDRSEKVLPRSHMVAKYIVATYVG 191
Query: 198 LTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITVFLMIMGAV 257
+TL+G+ ++ GMS FDA H+M+ + TGG S+ D S+ + ++ V +MI+G++
Sbjct: 192 ITLLGSLAFWGAGMSPFDAVNHAMSAISTGGFSTSDQSLAKWKQPAVHWTAVVVMILGSL 251
Query: 258 NFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPIRALRESIFHA 317
F ++ R + KD QV+ + LL T LM + A R +
Sbjct: 252 PFALYVATLRGHR-KALIKDQQVRGLLGLLLVTWLLMGTWYAVTSKLPWMDAFRIVAVNV 310
Query: 318 VSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQ 377
S +T TGF +G+ + + + L +GG +GSTAGGIK+ R + + LK + Q
Sbjct: 311 TSVVTTTGFALGDYSMWGHFSIMLFFYLGFIGGCSGSTAGGIKIFRFQVAYTLLKANLYQ 370
Query: 378 AILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKFADALFESA 437
I P+ A++++ + E+ ++ +L F+ +FA ++ + +G + AL +A
Sbjct: 371 LIHPR-AVLKQNYNGHRLDEEIVRSILTFSF-FFAIVVCLLALGLSLIGLDWMTALTGAA 428
Query: 438 SAIGNVGLSVG-ITSP-----LLPPDIKVLLITLMWVGRLEIFSTIVFI 480
S + VG +G I P LP K LL M +GRLEI + +V +
Sbjct: 429 STVAGVGPGMGPIIGPSGNFASLPDAAKWLLAAGMLLGRLEIITVLVLL 477
>gb|AAF33407.1| (AF233324) 98% identity with E. coli potassium uptake protein TRKH
(SW:P21166) [Salmonella typhimurium LT2]
Length = 483
Score = 203 bits (510), Expect = 5e-51
Identities = 128/415 (30%), Positives = 213/415 (50%), Gaps = 14/415 (3%)
Query: 75 DVNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLES 132
++ R+ + W V +PF+ ++ D+ FE+ S T TG T + L+S
Sbjct: 63 ELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDS 122
Query: 133 YPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFVNTA 188
P ILF+R +QW GG+GI+++A+ IL GV +LYRAE + ++ P TA
Sbjct: 123 LPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETA 182
Query: 189 KIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE-II 247
K + IY LLT+ A + GM FDA HS + + GG S+HD S+GYF S +I II
Sbjct: 183 KTLWLIYVLLTVACALALWFAGMPAFDAIGHSFSTIAIGGFSTHDASVGYFDSPTINTII 242
Query: 248 TVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHF-NP 306
+FL+I G N+ +H+ + +SL+ +++D + + + + + T+ L + + +
Sbjct: 243 AIFLLISGC-NYGLHFSLLSGRSLKVYWRDPEFRMFIGVQLTLVVICTLVLWFHNIYDSA 301
Query: 307 IRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIAL 366
+ L ++ F VS T GF ++A +P V L +GG AGST GG+K+IRI L
Sbjct: 302 LTTLNQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILL 361
Query: 367 TFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLG 426
F+ +++ + P A+ K+G E ++ V GF Y A + ++ ++ G
Sbjct: 362 LFKQGNRELKRLVHP-NAVYSIKLGNRALPERILEAVWGFFSAY-ALVFIVSMLAIIATG 419
Query: 427 AKFADALFESASAIGNVGLSVGITS---PLLPPDIKVLLITLMWVGRLEIFSTIV 478
A + + N+G +G+ + + P K +LI M GRLE+F+ +V
Sbjct: 420 VDDFSAFASVVATLNNLGPGLGVVADNFASMNPVAKWILIANMLFGRLEVFTLLV 474
>sp|P21166|TRKH_ECOLI TRK SYSTEM POTASSIUM UPTAKE PROTEIN TRKH >gi|1361256|pir||A56151
trkH protein (corrected) - Escherichia coli
Length = 483
Score = 202 bits (508), Expect = 9e-51
Identities = 128/415 (30%), Positives = 212/415 (50%), Gaps = 14/415 (3%)
Query: 75 DVNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLES 132
++ R+ + W V +PF+ ++ D+ FE+ S T TG T + L+S
Sbjct: 63 ELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDS 122
Query: 133 YPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFVNTA 188
P ILF+R +QW GG+GI+++A+ IL GV +LYRAE + ++ P TA
Sbjct: 123 LPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETA 182
Query: 189 KIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE-II 247
K + IY LLT+ A + GM FDA HS + GG S+HD SIGYF S +I II
Sbjct: 183 KTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTII 242
Query: 248 TVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYG-HFNP 306
+FL+I G N+ +H+ + +SL+ +++D + + + + + T+ L + + +
Sbjct: 243 AIFLLISGC-NYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSSA 301
Query: 307 IRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIAL 366
+ + ++ F VS T GF ++A +P V L +GG AGST GG+K+IRI L
Sbjct: 302 LMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILL 361
Query: 367 TFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLG 426
F+ +++ + P A+ K+G E ++ V GF Y A + ++ ++ G
Sbjct: 362 LFKQGNRELKRLVHP-NAVYSIKLGNRALPERILEAVWGFFSAY-ALVFIVSMLAIIATG 419
Query: 427 AKFADALFESASAIGNVGLSVGITS---PLLPPDIKVLLITLMWVGRLEIFSTIV 478
A + + N+G +G+ + + P K +LI M GRLE+F+ +V
Sbjct: 420 VDDFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFGRLEVFTLLV 474
>pir||G81931 probable transmembrane potassium transporter NMA0859 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379575|emb|CAB84140.1| (AL162754) putative
transmembrane potassium transporter [Neisseria
meningitidis Z2491]
Length = 485
Score = 200 bits (504), Expect = 3e-50
Identities = 125/405 (30%), Positives = 208/405 (50%), Gaps = 21/405 (5%)
Query: 89 WL-FASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWL 147
WL FA++ ++ ++ M F D+ FE+MS T TG T++ H++ + FWR + WL
Sbjct: 78 WLAFAAMAAMPMYLYFPNMGFTDAFFESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWL 137
Query: 148 GGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFVNTAKIIVQIYTLLTLVGA 203
GG+GI+++A+ IL GV +L++AE + ++ P AK + YTL+T++ A
Sbjct: 138 GGMGIIVLAVAILPMLGVGGTQLFKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAA 197
Query: 204 YLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITVFLMIMGAVNFTVHY 263
+ GMS FDA H+M L GG S+HD SI Y++S IE + + I+G +NF H+
Sbjct: 198 ACLHFAGMSWFDAVCHAMATLSLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFASHF 257
Query: 264 KVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPI-RALRESIFHAVSAIT 322
+SL+ ++KD + +TM LL+ +I + L G++ +LR + F+ VS
Sbjct: 258 AALNSRSLKTYWKDEECRTMLLLLSGSILTAALYLWHTGYYAGFTESLRYTAFNFVSIGL 317
Query: 323 CTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQAILPK 382
G + A +P + +++ L + ++GST GGIK IR + F+ + + PK
Sbjct: 318 ANGLANTDFAQWPLLISLWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPK 377
Query: 383 GAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTI----YMMLRLGAKFADALFESAS 438
V + S I + L T+ F F+ F T+ ++++ G +F A +
Sbjct: 378 A------VRTVKISGKAIPDRLALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIA 431
Query: 439 AIGNVGLSVGITSPL-----LPPDIKVLLITLMWVGRLEIFSTIV 478
I N G +G P L K + +T M +GRLEIF+ +
Sbjct: 432 CITNAGPGLGEVGPAGNYAGLDVMQKWICVTAMLLGRLEIFTVFI 476
>pir||E64157 hypothetical protein HI0723 - Haemophilus influenzae (strain Rd
KW20)
Length = 423
Score = 190 bits (478), Expect = 3e-47
Identities = 109/363 (30%), Positives = 195/363 (53%), Gaps = 14/363 (3%)
Query: 72 HVEDVNLRQAMIASAFTWLFASVVSVVPFMSIAK--MSFIDSLFETMSAWTGTGLTMMSH 129
H +++ R + WL ++ +P + ++ ++FE S T TG T+M+
Sbjct: 60 HKQELRSRDGFLIVVAFWLVLGSLATLPLLLFDSPHLTIASAVFEAFSGLTTTGATVMTG 119
Query: 130 LESYPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFV 185
L++ PK ILF+R ++QWLGG+GI+++A+ I+ G+ +LYRAE+ + ++ LP
Sbjct: 120 LDNLPKSILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGTQLYRAESSGPLKDQKSLPKIS 179
Query: 186 NTAKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE 245
AK + IY LT++ A Y+++GM+LFDA HS + + GG S+HD SIGYF+ SI
Sbjct: 180 EVAKALWIIYASLTVLCAIAYWLSGMNLFDAIGHSFSTISNGGFSTHDASIGYFNQASIY 239
Query: 246 IITVFLMIMGAVNFTVHYKVF----RDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISY 301
+T M++G VNF++H F + RN++KD + + + I ++++SL Y
Sbjct: 240 WVTTIFMLIGGVNFSLHISAFLALGKRNIWRNYWKDPEFRFFLTMQIIFIGIVSLSLYGY 299
Query: 302 GHFNPI-RALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIK 360
G + I A+ + S G+ I ++ N P + L + V+GG GST GG+K
Sbjct: 300 GLVSDINEAVTKGALQLTSMSMTAGYTIFDIDNLPPFIGLLLVISAVIGGCGGSTTGGLK 359
Query: 361 LIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIY 420
IR + ++ + + I P + ++G+ + I+ + F + + F+ G ++
Sbjct: 360 AIRTLILWKQIDRELHSLIHP-NLVQPIRIGKNRLAPRMIESIWAFFIILYWFI--GGVF 416
Query: 421 MML 423
++L
Sbjct: 417 LLL 419
>pir||B65190 potassium uptake protein trkH [validated] - Escherichia coli
>gi|2367317|gb|AAC76852.1| (AE000460) potassium uptake,
requires TrkE [Escherichia coli K12]
Length = 432
Score = 185 bits (464), Expect = 1e-45
Identities = 113/363 (31%), Positives = 185/363 (50%), Gaps = 10/363 (2%)
Query: 75 DVNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLES 132
++ R+ + W V +PF+ ++ D+ FE+ S T TG T + L+S
Sbjct: 63 ELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDS 122
Query: 133 YPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFVNTA 188
P ILF+R +QW GG+GI+++A+ IL GV +LYRAE + ++ P TA
Sbjct: 123 LPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETA 182
Query: 189 KIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE-II 247
K + IY LLT+ A + GM FDA HS + GG S+HD SIGYF S +I II
Sbjct: 183 KTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTII 242
Query: 248 TVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYG-HFNP 306
+FL+I G N+ +H+ + +SL+ +++D + + + + + T+ L + + +
Sbjct: 243 AIFLLISGC-NYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSSA 301
Query: 307 IRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIAL 366
+ + ++ F VS T GF ++A +P V L +GG AGST GG+K+IRI L
Sbjct: 302 LMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILL 361
Query: 367 TFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLG 426
F+ +++ + P A+ K+G E ++ V GF Y + + ++ R
Sbjct: 362 LFKQGNRELKRLVHP-NAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIARAW 420
Query: 427 AKF 429
F
Sbjct: 421 MTF 423
>emb|CAA38502.1| (X54687) ORF401 [Escherichia coli]
Length = 401
Score = 184 bits (463), Expect = 2e-45
Identities = 114/361 (31%), Positives = 185/361 (50%), Gaps = 11/361 (3%)
Query: 75 DVNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLES 132
++ R+ + W V +PF+ ++ D+ FE+ S T TG T + L+S
Sbjct: 43 ELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDS 102
Query: 133 YPKVILFWRAWMQWLGGIGIVLV-ALTILIRPGVAAARLYRAEA----RSERILPNFVNT 187
P ILF+R +QW GG+GI++V A+ IL GV +LYRAE + ++ P T
Sbjct: 103 LPHAILFYRQMLQWFGGMGIIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAET 162
Query: 188 AKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE-I 246
AK + IY LLT+ A + GM FDA HS + GG S+HD SIGYF S +I I
Sbjct: 163 AKTLWLIYVLLTVASALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTI 222
Query: 247 ITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYG-HFN 305
I +FL+I G N+ +H+ + +SL+ +++D + + + + + T+ L + + +
Sbjct: 223 IAIFLLISGC-NYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSS 281
Query: 306 PIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIA 365
+ + ++ F VS T GF ++A +P V L +GG AGST GG+K+IRI
Sbjct: 282 ALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL 341
Query: 366 LTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRL 425
L F+ +++ + P A+ K+G E ++ V GF Y + + ++ R
Sbjct: 342 LLFKQGNRELKRLVHP-NAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIARA 400
Query: 426 G 426
G
Sbjct: 401 G 401
>pir||JQ0754 hypothetical 46K protein (pepQ 3' region) - Escherichia coli
Length = 421
Score = 184 bits (463), Expect = 2e-45
Identities = 114/361 (31%), Positives = 185/361 (50%), Gaps = 11/361 (3%)
Query: 75 DVNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLES 132
++ R+ + W V +PF+ ++ D+ FE+ S T TG T + L+S
Sbjct: 63 ELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDS 122
Query: 133 YPKVILFWRAWMQWLGGIGIVLV-ALTILIRPGVAAARLYRAEA----RSERILPNFVNT 187
P ILF+R +QW GG+GI++V A+ IL GV +LYRAE + ++ P T
Sbjct: 123 LPHAILFYRQMLQWFGGMGIIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAET 182
Query: 188 AKIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE-I 246
AK + IY LLT+ A + GM FDA HS + GG S+HD SIGYF S +I I
Sbjct: 183 AKTLWLIYVLLTVASALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTI 242
Query: 247 ITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYG-HFN 305
I +FL+I G N+ +H+ + +SL+ +++D + + + + + T+ L + + +
Sbjct: 243 IAIFLLISGC-NYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSS 301
Query: 306 PIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIA 365
+ + ++ F VS T GF ++A +P V L +GG AGST GG+K+IRI
Sbjct: 302 ALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL 361
Query: 366 LTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRL 425
L F+ +++ + P A+ K+G E ++ V GF Y + + ++ R
Sbjct: 362 LLFKQGNRELKRLVHP-NAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIARA 420
Query: 426 G 426
G
Sbjct: 421 G 421
>pir||S30740 trkH protein - Escherichia coli >gi|148249|gb|AAA67646.1| (M87049)
identified in Swiss-Prot entry P21166 as trkH, part of
the potassium uptake system [Escherichia coli]
Length = 431
Score = 184 bits (462), Expect = 2e-45
Identities = 115/363 (31%), Positives = 187/363 (50%), Gaps = 11/363 (3%)
Query: 75 DVNLRQAMIASAFTWLFASVVSVVPFM--SIAKMSFIDSLFETMSAWTGTGLTMMSHLES 132
++ R+ +I F W V +PF+ ++ D+ FE+ S T TG T + L+S
Sbjct: 63 ELKSREFLIVVLF-WTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDS 121
Query: 133 YPKVILFWRAWMQWLGGIGIVLVALTILIRPGVAAARLYRAEA----RSERILPNFVNTA 188
P ILF+R +QW GG+GI+++A+ IL GV +LYRAE + ++ P TA
Sbjct: 122 LPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETA 181
Query: 189 KIIVQIYTLLTLVGAYLYYINGMSLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLSIE-II 247
K + IY LLT+ A + GM FDA HS + GG S+HD SIGYF S +I II
Sbjct: 182 KTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTII 241
Query: 248 TVFLMIMGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYG-HFNP 306
+FL+I G N+ +H+ + +SL+ +++D + + + + + T+ L + + +
Sbjct: 242 AIFLLISGC-NYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSSA 300
Query: 307 IRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIAL 366
+ + ++ F VS T GF ++A +P V L +GG AGST GG+K+IRI L
Sbjct: 301 LMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILL 360
Query: 367 TFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLG 426
F+ +++ + P A+ K+G E ++ V GF Y + + ++ R
Sbjct: 361 LFKQGNRELKRLVHP-NAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIARAW 419
Query: 427 AKF 429
F
Sbjct: 420 MTF 422
>pir||B70007 Na+-transporting ATP synthase homolog yubG - Bacillus subtilis
>gi|2635594|emb|CAB15088.1| (Z99119) similar to
Na+-transporting ATP synthase [Bacillus subtilis]
Length = 445
Score = 118 bits (292), Expect = 2e-25
Identities = 103/404 (25%), Positives = 186/404 (45%), Gaps = 32/404 (7%)
Query: 88 TWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWL 147
T + +V+ ++P + +S+ID+LF SA T TGL ++ ++ + +F + + L
Sbjct: 27 TIIIGAVLLMLPISTTKPLSWIDALFTAASATTVTGLAVV---DTGTQFTVFGQTVIMGL 83
Query: 148 ---GGIGIVLVALTILIRPGVAAA---RLYRAEARSERILPNFVNTAKIIVQIYTLLTLV 201
GG+G + A+ I++ G R+ EA ++ + + K++ + L+
Sbjct: 84 IQIGGLGFMTFAVLIVMILGKKIGLKERMLVQEALNQPTIGGVIGLVKVLFLFSISIELI 143
Query: 202 GAYLYYIN-------GMSLFDAFIHSMTGLGTGGMSSH-DLSIGYFHSLSIEIITVFLMI 253
A + I LF + H+++ G S D + Y ++ ++ FL I
Sbjct: 144 AALILSIRLVPQYGWSSGLFASLFHAISAFNNAGFSLWPDNLMSYVGDPTVNLVITFLFI 203
Query: 254 MGAVNFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISY------GHFNPI 307
G + FTV + V +++ + F ++ L+ I ++TV ++ Y GH + +
Sbjct: 204 TGGIGFTVLFDVMKNRRFKTFSLHTKLMLTGTLMLNAIAMLTVFILEYSNPGTLGHLHIV 263
Query: 308 RALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALT 367
L S F AV+ T GF + + E VF LLM +G + STA GIKL +
Sbjct: 264 DKLWASYFQAVTPRT-AGFNSLDFGSMREGTIVFTLLLMFIGAGSASTASGIKLTTFIVI 322
Query: 368 FESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGA 427
S+ I K +I R+ +Y I + L ++T + G + + A
Sbjct: 323 LTSV---IAYLRGKKETVIFRRSIKYPI----IIKALAVSVTSLFIVFLGIFALTITEQA 375
Query: 428 KFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRL 471
F +FE+ SA G VGL++G+T P L K ++I +M++GR+
Sbjct: 376 PFLQIVFETFSAFGTVGLTMGLT-PELTTAGKCIIIVIMFIGRI 418
>pir||D81336 probable K+ uptake protein Cj1283 [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6968715|emb|CAB73536.1|
(AL139077) putative K+ uptake protein [Campylobacter
jejuni]
Length = 447
Score = 99.1 bits (243), Expect = 1e-19
Identities = 98/417 (23%), Positives = 192/417 (45%), Gaps = 36/417 (8%)
Query: 90 LFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYP---KVILFWRAWMQW 146
LF +++ + + F+D+ F + SA + TGL + + + ++I+ +
Sbjct: 23 LFGALLLHSSWAHTTPIDFLDAFFTSTSAVSMTGLVVKNTAVDFTLAGQIIILALVQIGG 82
Query: 147 LGGIGIVL-VALTILIRPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYL 205
LG +GI L V + I + G +A L + + F K+++ I+T+ L+GA L
Sbjct: 83 LGYMGIGLFVYILIRKKVGFSARNLLKESLFYPSMDGLFKFFKKVLLFIFTI-ELIGAIL 141
Query: 206 YYIN-------GMSLFDAFIHSMTGLGTGGMSSHDLS-IGYFHSLSIEIITVFLMIMGAV 257
+ +L+ HS++ G + + I Y H ++I +I L+I+G +
Sbjct: 142 LTMRFALEMNFKKALWFGIFHSISAFNNSGFTIFEHGFIAYKHDIAINLIITSLIIIGGL 201
Query: 258 NFTVHYKV--FRDKSLRNFF---KDIQVKTMFYLLAATIPLMTVSLIS---YGHFNPIRA 309
+ V ++ F+ K L+N K + V ++F + ++T+ + + GHF+
Sbjct: 202 GYFVLVELYFFQRKKLQNLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDK 261
Query: 310 LRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFE 369
+ S F A++ T GF ++ + + F SL MV+GG+ G TAGG+K+ + +
Sbjct: 262 ILSSYFIAINYRTA-GFNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLL 320
Query: 370 SLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYM-MLRLGAK 428
W+I+ R ++ +E + I + + +++ I + +L
Sbjct: 321 YAYWSIRDG--------RVRIFGHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFD 372
Query: 429 FADALFESASAIGNVGLSVG-----ITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI 480
F LFE++SA VG+SVG L KV++I +M GR+ +F+ ++ +
Sbjct: 373 FIALLFETSSAFATVGISVGNGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSV 429
>dbj|BAB06813.1| (AP001517) Na+-transporting ATP synthase [Bacillus halodurans]
Length = 449
Score = 96.0 bits (235), Expect = 9e-19
Identities = 99/422 (23%), Positives = 192/422 (45%), Gaps = 34/422 (8%)
Query: 79 RQAMIASAFTWLFASVVSVVPFMSI--AKMSFIDSLFETMSAWTGTGLTMMSHLESYPKV 136
R M++ SV+ +P ++F ++LF ++SA + TGLT+++ E+Y +
Sbjct: 13 RMIMVSYIIAMFLFSVLLFLPISQQPGVNLTFSEALFTSVSAVSVTGLTVVNVSETYSYI 72
Query: 137 ILFWRAWMQWLGGIGIVLVALTILIRPG---VAAARLYRAEARSERILPNFVNTAKIIVQ 193
+ + A LGGIGI+ + + + G + + R+ +++ VN + I+
Sbjct: 73 GILFLALAIQLGGIGIMTLGTFVWMLFGKKIILSQRMLIMVDQNQNQFSGLVNLMRGILL 132
Query: 194 IYTLLTLVGAYL---YYIN-----GMSLFDAFIHSMTGLGTGGMS-SHDLSIGYFHSLSI 244
+ + +GA + YYI G + + +++ G + + I + +
Sbjct: 133 VALSIEFIGALILGTYYIRYFDTVGEAYYQGAFAALSAFTNAGFDITGESLIPFADDYYV 192
Query: 245 EIITVFLMIMGAVNFTVHYKV--FRDKSLRNFFKDI--QVKTMFYLLAATIPLMTVSLIS 300
+++T+ L+ GA+ F V +V + K NF + ++ T + ++ + +
Sbjct: 193 QLVTILLIFAGAIGFPVFLEVRAYFSKENPNFTFSLFTKITTTTFFAVFIFGVIGIWALE 252
Query: 301 YGHFNPIRALRESIFHAV---SAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAG 357
H+ + +F AV + G I ++++ +F+S LM++G S S G
Sbjct: 253 KNHYFVGLEWHQQLFTAVFNSATSRSGGLTIMDISDLSLATLLFISGLMIIGASPSSVGG 312
Query: 358 GIKLIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFG 417
GI+ +A+ F TI+ L K + KV E ++ Q+ ++ F LLF
Sbjct: 313 GIRTTTLAVMF----LTIRSFALGKQDV---KVFGREIHPEDQQKSF-IVISVFLVLLFA 364
Query: 418 TIYMMLRLGAKFADAL----FESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEI 473
+ M+ A L FE+ASA G GLS+GIT L P + +L+ LM++GR+ +
Sbjct: 365 AVIMISAFERGSAIPLIAIIFETASAFGTCGLSMGITDELSLPS-QFILMVLMFIGRVGL 423
Query: 474 FS 475
+
Sbjct: 424 IA 425
>pir||C70190 K+ transport protein (ntpJ) homolog - Lyme disease spirochete
>gi|2688660|gb|AAC67073.1| (AE001172) K+ transport
protein (ntpJ) [Borrelia burgdorferi]
Length = 443
Score = 95.6 bits (234), Expect = 1e-18
Identities = 109/402 (27%), Positives = 187/402 (46%), Gaps = 44/402 (10%)
Query: 105 KMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILIRP- 163
K+++ID+LF +SA + TGLT + +E + + LGG+G + + L+ P
Sbjct: 41 KLAYIDALFTAVSAVSITGLTTVK-MEGFSTFGFILIMLLIQLGGLGFISITTFYLLIPK 99
Query: 164 ---GVAAARLYRAEARSE------RILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLF 214
+ AR+ + + S RIL + + I I +L L+ L +N +S
Sbjct: 100 KKMNLTDARIIKQYSLSNIEYNPIRILKSILFITFSIEMIGLILILICFKLRGVN-ISFL 158
Query: 215 DAFIHSMTGLGTGGMSSHDLSIGYFHSLSIEIITV-FLMIMGAVNFTVHYKVFRDKSLRN 273
+A +++ G S H SI + + I+ V L+I G + F V+ V + +++N
Sbjct: 159 EALFTTISAFCNAGFSMHSESIYAWRDVPEAIVVVSILIICGGLGFMVYRDV--NNTIKN 216
Query: 274 FFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPIRA-------LRESIFHAVSAITCTGF 326
K + + L+ + ++ L + + ++A + SIF+++S T GF
Sbjct: 217 KKKLSLHAKIVFSLSFFLIIIGAILFFFTEMHKLKAGYSMSTLIFNSIFYSISTRTA-GF 275
Query: 327 GIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQAILPKGAII 386
+ + ++ M +GG+ GSTAGGIK+ TF + + + G II
Sbjct: 276 NYLDNSLISGRTQIISLPFMFIGGAPGSTAGGIKIT----TFFLIVLAVVKNQNGNGYII 331
Query: 387 RRKVGEYEFSEDEIQEVLGFTMTYFA---FLLFGTIYMMLRLGA-----KFADALFESAS 438
G Y+ S D I+ F + +FA F+L + +M+L K D +E S
Sbjct: 332 ----GSYKVSIDSIR----FALLFFARAIFILSFSFFMLLFFEGGSGNWKVIDLGYEVFS 383
Query: 439 AIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFI 480
A G VGLSVG+T L KV++I M+ GR+ +FS VF+
Sbjct: 384 AFGTVGLSVGVTQDLSFWG-KVIIIFTMFAGRIGLFSMAVFV 424
>pir||H70430 K+ transport protein homolog - Aquifex aeolicus
>gi|2983882|gb|AAC07434.1| (AE000743) K+ transport
protein homolog [Aquifex aeolicus]
Length = 443
Score = 95.2 bits (233), Expect = 2e-18
Identities = 102/430 (23%), Positives = 183/430 (41%), Gaps = 37/430 (8%)
Query: 79 RQAMIASAFTWLFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVIL 138
R + + + L +++ +P + +SF+D+LF SA T TGL + L++Y L
Sbjct: 9 RTLLFSFSLLILVGALLLYLPISTTRPISFLDALFTATSAVTVTGLAV---LDTYSDFTL 65
Query: 139 FWRAWMQWL---GGIGIVLVALTILIRPGVAAA---RLYRAEARSERILPNFVNTAKIIV 192
F + + +L GG+G + ++ L+ G RL AE+ + + K +
Sbjct: 66 FGKLVILFLIQVGGLGYMTLSTFFLVLLGRRIGLKERLILAESLEYPSMHGLIRFLKRVF 125
Query: 193 QIYTLLTLVGAYL----YYINGMS--LFDAFIHSMTGLGTGGMSSHDLSIGYFHS-LSIE 245
+ L GA L + + G+ +F+ HS++ G S+ + F L +
Sbjct: 126 SFVFITELTGAILLSIYFSLKGVEDPVFNGIFHSVSAFNNAGFSTFKNGLLDFRGDLFVN 185
Query: 246 IITVFLMIMGAVNFTVHYKVF-----RDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLIS 300
++ FL+I+G + F V ++ + L K + + ++ +L T+ L+ +
Sbjct: 186 LVISFLIILGGIGFFVVNDIYLWYTKKVPRLSVHTKLVMITSVLLILLGTVGLIFTEFGN 245
Query: 301 YG---HFNPIRALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAG 357
Y ++ + S F +VS+ T GF +L + E + L +LM +G S G T G
Sbjct: 246 YKGLWQYDWYERILSSYFMSVSSRTA-GFSTVDLIDMSESSQFLLMILMFIGASPGGTGG 304
Query: 358 GIKLIRIALTFESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFG 417
GIK TF + + + + + + E E I++ L F+ F
Sbjct: 305 GIK----TTTFVVILIAVYSFVRGREQSV---IFERSVPESTIKKALVILSLSIFFINFV 357
Query: 418 TIYMMLRLGAKFADALFESASAIGNVGLSVGITSPL-----LPPDIKVLLITLMWVGRLE 472
+ + F +FE SA VGLS+G L P K+++I M VGRL
Sbjct: 358 NLMLDKFENKDFLYTMFEVVSAFSTVGLSIGNPEGLSFCADFSPLGKIVIIITMLVGRLG 417
Query: 473 IFSTIVFIVG 482
I + + G
Sbjct: 418 ILGFALALTG 427
>dbj|BAA32063.1| (D89592) KtrB [Vibrio alginolyticus]
Length = 455
Score = 92.4 bits (226), Expect = 1e-17
Identities = 96/404 (23%), Positives = 179/404 (43%), Gaps = 38/404 (9%)
Query: 92 ASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMS---HLESYPKVILFWRAWMQWLG 148
++V+ +P S++ +S D+LF SA + TGL ++ H K++L + +G
Sbjct: 39 SAVLLTLPVFSVSGLSITDALFTATSAISVTGLGVVDTGQHFTLAGKILLMC---LMQIG 95
Query: 149 GIGIVLVALTILIRPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGA----Y 204
G+G + ++ +L GV + +A A+ VN +++ +I T + A +
Sbjct: 96 GLGQMTLSAVLLYMFGVRLSLRQQALAKEALGQERQVNLRRLVKKIVTFALVAEAIGFVF 155
Query: 205 LYY--INGMS----LFDAFIHSMTGLGTGGMSSH-DLSIGYFHSLSIEIITVFLMIMGAV 257
L Y + M +F A HS++ G + D + + + + L I G +
Sbjct: 156 LSYRWVPEMGWQTGMFYALFHSISAFNNAGFALFSDSMMSFVNDPLVSFTLAGLFIFGGL 215
Query: 258 NFTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISY----------GHFNPI 307
FTV V+R R F + + T L+A + L+ +++ + G
Sbjct: 216 GFTVIGDVWRH--WRKGFHFLHIHTKIMLIATPLLLLVGTVLFWLLERHNPNTMGSLTTG 273
Query: 308 RALRESIFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALT 367
+ F + SA T GF +L + + + + +LM++G + ST GGIK+ A+
Sbjct: 274 GQWLAAFFQSASARTA-GFNSVDLTQFTQPALLIMIVLMLIGAGSTSTGGGIKVSTFAVA 332
Query: 368 FESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGA 427
F + WT + K ++ ++ + + + L + A L +ML A
Sbjct: 333 FMAT-WTFLRQ--KKHVVMFKRTVNWP----TVTKSLAIIVVSGAILTTAMFLLMLTEKA 385
Query: 428 KFADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRL 471
F +FE+ SA VGL+ G+T+ L P K ++I +M +GR+
Sbjct: 386 SFDKVMFETISAFATVGLTAGLTAELSEPG-KYIMIVVMIIGRI 428
>pir||H69862 Na+-transporting ATP synthase homolog ykrM - Bacillus subtilis
>gi|2633721|emb|CAB13223.1| (Z99111) similar to
Na+-transporting ATP synthase [Bacillus subtilis]
Length = 449
Score = 90.5 bits (221), Expect = 4e-17
Identities = 94/407 (23%), Positives = 183/407 (44%), Gaps = 46/407 (11%)
Query: 104 AKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILI-- 161
A +FID+LF +S+ + TGLT++ +++ + +F A++ GGIGI+ + I +
Sbjct: 43 ADWTFIDALFTAVSSVSVTGLTVVDTADTFSTIGIFILAFVLQFGGIGIMTLGTFIWLIM 102
Query: 162 --RPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLFD---- 215
R G+ +L + +++ VN K ++ + + G + ++ +D
Sbjct: 103 GKRIGLKERKLIMVD-QNQSQFSGIVNLMKQVLFLILWIEFFGGLILGTYFLTYYDSYQE 161
Query: 216 AFIH----SMTGLGTGGMS-SHDLSIGYFHSLSIEIITVFLMIMGAVNFTVHYKVFRDKS 270
A++H S++ GG + + I + H ++ IT+ L+I GA+ F V +V
Sbjct: 162 AYLHGFFASISATTNGGFDITGNSMIPFRHDYFVQFITMLLIIFGAIGFPVLVEV----- 216
Query: 271 LRNFFKDIQVKTMFYLLAATIPLMTVSLISYG----------HFNPIRALRESIFHAVSA 320
++F + F L + SL+ +G H ++ + +F ++
Sbjct: 217 -KDFLFSKHRRYPFTLFTKITTITFGSLVLFGAIGIFALEANHAFAGKSWHDILFLSLFQ 275
Query: 321 ITCT---GFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQ- 376
T T G +++ + F+ LM +G S S GGI+ AL +L +
Sbjct: 276 STATRSGGLATIDISQLSDSTLFFICALMFIGASPSSVGGGIRTTTFALNLLALFHFARG 335
Query: 377 -QAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKFADALFE 435
+A+ KV + E ++ + L TM + T+ + + + LFE
Sbjct: 336 NKAV---------KVFKRELHPADLMKSLVVTMMAILLVFGATLILTITEKHSLLELLFE 386
Query: 436 SASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFIVG 482
SA G GLS+GIT+ L K +++ +M++GR+ I T ++++G
Sbjct: 387 VCSAFGTTGLSLGITADLSSVG-KCVIMIVMFIGRIGIL-TFLYLIG 431
>pir||F71360 probable K+ transport protein (ntpJ) - syphilis spirochete
>gi|3322404|gb|AAC65128.1| (AE001199) K+ transport
protein (ntpJ) [Treponema pallidum]
Length = 575
Score = 89.3 bits (218), Expect = 9e-17
Identities = 108/400 (27%), Positives = 180/400 (45%), Gaps = 48/400 (12%)
Query: 106 MSFIDSLFETMSAWTGTGLTMM---SHLESYPKVILFWRAWMQWLGGIGIVLVAL--TIL 160
+ + +LF SA TGL+++ + L ++ K IL A + +GG+G ++ + I
Sbjct: 162 LPMLTALFTATSAVCVTGLSVIDVATQLSTWGKAIL---AALIQIGGLGFMVFSFFGMIT 218
Query: 161 IRPGVAA-ARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYING--------M 211
I+ ++ +RL + S+ + + + K+I+ + + A ++
Sbjct: 219 IKKKMSLESRLVASHLVSDSDMGSLSHNLKLIIFSTFFIEALSALFLFVGFSQTEGYTIQ 278
Query: 212 SLFDAFIHSMTGLGTGGMSSHDLSIGYFHSLS-IEIITVFLMIMGAVNFTVHYKVFR--D 268
SL +A+ H+++ G S + S+ F S I F +I+G ++F V +V
Sbjct: 279 SLGNAYFHAISAFCNAGFSLYPNSLESFVSNPWITFPIAFTIILGGISFVVIDEVLCRVH 338
Query: 269 KSLRN-FFKDIQVK-----TMFYLLAATIPLMTVSLISYGHFNPIRALR---------ES 313
S++N FFK + F +L AT+ L+ VS + +++ +
Sbjct: 339 GSIKNIFFKGKNILGSLSLNTFVVLKATVLLLAVSFVGIYLLEHTHSMKVYQVGTQYLAA 398
Query: 314 IFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKW 373
F AV+ T GF +N F++ +M VGG++GSTAGGIKL A S +
Sbjct: 399 FFQAVTLRTA-GFSTIPFSNLRTATLFFMTFIMFVGGASGSTAGGIKLNTAAAIIASFRS 457
Query: 374 TIQQAILP--KGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKFAD 431
I P + +I+ K E F +LGF + F + L F
Sbjct: 458 FIHHDPKPRIRNLVIQGKQVERSFL------ILGFGICTVCLAGF---CLSLTDNIPFIY 508
Query: 432 ALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRL 471
LFES SA VGLSVGIT+ L + +LLI LM+ GR+
Sbjct: 509 LLFESVSAFATVGLSVGITANLSTAGLMILLI-LMFTGRV 547
>dbj|BAB04317.1| (AP001509) Na+-transporting ATP synthase [Bacillus halodurans]
Length = 448
Score = 89.3 bits (218), Expect = 9e-17
Identities = 87/403 (21%), Positives = 167/403 (40%), Gaps = 34/403 (8%)
Query: 90 LFASVVSVVPFMSIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGG 149
+ +++ +P S +S++D++F SA T TGL ++ Y + LGG
Sbjct: 32 MIGTLLLKLPIASTTYISWVDAMFTATSAITVTGLVVVDTGTDYTVFGQVVIMILIQLGG 91
Query: 150 IGIVLVALTILIRPGVAAA---RLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLY 206
+G++ A+ ++ G R+ EA ++ L + ++++ ++ + L
Sbjct: 92 LGLMTFAVLAVMMLGKKIGLQQRILIQEAMNQTSLGGLIRLVRVLLLFTLVMETIAFILL 151
Query: 207 YINGM-------SLFDAFIHSMTGLGTGGMSSHDLSIG-YFHSLSIEIITVFLMIMGAVN 258
I + ++ + H+++ G S S+ Y +I +I L I G +
Sbjct: 152 SIRWVPEFGWREGMYQSLFHTISAFNNAGFSLWSDSLSAYVGDPAINLIITILFITGGIG 211
Query: 259 FTVHYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPIRALRES----- 313
FTV ++ K+ R ++ + L I + + ++ Y + + + L +S
Sbjct: 212 FTVLADLWYKKTFRALSLHSKIMLLGTLALNCIAFIAIFILEYANPHTLGGLAQSDRFWG 271
Query: 314 -IFHAVSAITCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKL----IRIALTF 368
F AV+ T GF +A+ V + LLM +G + STA GIK+ + I T+
Sbjct: 272 AYFQAVTPRTA-GFNTLEIADMTTASIVLILLLMFIGAGSASTASGIKVTTFFVMILATW 330
Query: 369 ESLKWTIQQAILPKGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAK 428
LK + + E I L + + + + A
Sbjct: 331 SFLKGRAETVVF-----------ERTIKLHTILRALAIIVISMMIVFIAVFILAITEDAP 379
Query: 429 FADALFESASAIGNVGLSVGITSPLLPPDIKVLLITLMWVGRL 471
F +FE SA G VGLS+G+T L K+ ++ +M++GR+
Sbjct: 380 FIVKVFEVFSAFGTVGLSMGLTGELTTLG-KMTIMVVMFIGRV 421
>gb|AAD05261.1| (AF109909) putative protein [Bacillus megaterium]
Length = 319
Score = 81.5 bits (198), Expect = 2e-14
Identities = 70/278 (25%), Positives = 131/278 (46%), Gaps = 23/278 (8%)
Query: 104 AKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIVLVALTILI-- 161
AK++FID LF +SA + TGLT +S +++ F ++ +GGIG++ ++ I +
Sbjct: 43 AKLAFIDRLFIAVSAVSVTGLTPVSTPDTFSTTGYFLLVFIFQIGGIGVMTLSTFIWMIL 102
Query: 162 --RPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGMSLF----D 215
+ G+ +L + R L V+ + I+ I + LVGA + ++ + + D
Sbjct: 103 GKKIGLKERQLIMTDHNQSR-LSGLVDLMRNILFIIFAIELVGAIILGLHFLRYYSSWTD 161
Query: 216 AFIH----SMTGLGTGGMSSHDLS-IGYFHSLSIEIITVFLMIMGAVNFTV------HYK 264
AF+H S++ G S I Y H ++++TV L+ +GA+ F V ++
Sbjct: 162 AFLHGFFASVSATTNAGFDITGSSFIPYAHDYFVQVVTVILITLGAIGFPVLIEIKHYFL 221
Query: 265 VFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSLISYGHFNPIRALRESIFHAV---SAI 321
F+DK F ++ T+ + L + + ++ + F ++ ES F+A +A
Sbjct: 222 TFKDKRKFQFSLFTKLTTIMFFLLLGGGTILILVLEHSGFLADKSWDESFFYAFFQSAAT 281
Query: 322 TCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGI 359
G N+ + + +S +M +G S S GGI
Sbjct: 282 RSGGVATMNINEFSLPTLIMMSAMMFIGASPSSVGGGI 319
>gb|AAC46143.1| (AF001974) putative TrkG [Thermoanaerobacter ethanolicus]
Length = 350
Score = 80.8 bits (196), Expect = 3e-14
Identities = 77/322 (23%), Positives = 135/322 (41%), Gaps = 31/322 (9%)
Query: 169 RLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGM-------SLFDAFIHSM 221
RL EA + L V AK I+ + L +GA + + + +++ HS+
Sbjct: 11 RLVMQEAFNTNSLGGIVKFAKYILMVSFLFESIGAIMLTLRFLPQMGLKKAVYYGLFHSI 70
Query: 222 TGLGTGG---MSSHDLSIGYFHSLSIEIITVFLMIMGAVNFTVHYKVFRDKSLRNFFKDI 278
+ G M + GY + ++ + L+I G + F V ++ + F
Sbjct: 71 SAFNNAGFDLMGNFKSLTGYVSDWVVNLVVMGLIIFGGLGFYVLLDIYEHRHFNKFTLHS 130
Query: 279 QVKTMFYLLAATIPLMTVSLISYGHFNPIRALR------ESIFHAVSAITCTGFGIGNLA 332
++ LL I + + L Y + + L ++F AV+ T GF +L+
Sbjct: 131 KIVITITLLLIAIGTLLIFLFEYNNPKTLGPLDFPTKILAALFQAVTPRTA-GFNTLSLS 189
Query: 333 NYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQ---QAILPKGAIIRRK 389
+ K +LM +G S T GGIK A+ ++ IQ + +L K I R
Sbjct: 190 DMTIASKFLTIILMFIGASPAGTGGGIKTTTFAVILYTVLSVIQGEEETVLYKRTISRNI 249
Query: 390 VGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKFADALFESASAIGNVGLSVGI 449
V + + F + F + T+ + + + F L+E+ SA G VGLS+G+
Sbjct: 250 VYK--------AVAISFISVFIIFSV--TMVLSITETSNFLTVLYETTSAFGTVGLSLGL 299
Query: 450 TSPLLPPDIKVLLITLMWVGRL 471
T P L K+++I M+ GR+
Sbjct: 300 T-PELSTVGKIIIIFTMYTGRV 320
>gb|AAG00941.1|AF272977_1 (AF272977) NtpJ protein [Mycoplasma hyopneumoniae]
Length = 491
Score = 72.2 bits (174), Expect = 1e-11
Identities = 109/449 (24%), Positives = 181/449 (40%), Gaps = 84/449 (18%)
Query: 97 VVPFM---SIAKMSFIDSLFETMSAWTGTGLTMMSHLESYPKVILFWRAWMQWLGGIGIV 153
V PF ++ K+SF+ +LF ++SA++ TGL+++ S+ A + LGGIGI
Sbjct: 39 VTPFAHTNAVDKISFLSALFTSVSAFSDTGLSLVDTGTSFNVFGQTIIAILISLGGIGIF 98
Query: 154 LVALTILI-----RPGVAAARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGA----- 203
V I + + + + + E S R L + KI + ++ +L L+ +
Sbjct: 99 AVKFYIFNLIFGKKISILSREILKIERGSSR-LNDLKGVIKISINLFLILVLISSLALML 157
Query: 204 --YLYYING--------------MSLFDAFIHSMTGLGTGGMSSHDLSIG------YFHS 241
Y Y I+ +SL A HS++ + G IG Y++S
Sbjct: 158 HFYYYEISPKKFSFQQSPYKNLVLSLRFAIFHSISAINNAGFDI----IGAYSFEPYYYS 213
Query: 242 LSIEIITVFLMIMGAVNFTV---HYKVFRDKSLRNFFKDIQVKTMFYLLAATIPLMTVSL 298
++II + L I+G + + V Y FR K + +VK + L + I L++ +
Sbjct: 214 YFLQIIIIILTIIGGIGYPVIFDFYSYFRIKLSKQ-----KVKNFRFSLFSKISLLSYFV 268
Query: 299 ISYGHFNPIRALRES-----------------------IFHAVSAITCTGFGIGNLANYP 335
IS+ F A S +FH + + TGF +L
Sbjct: 269 ISFFGFILFIAFEASSKSNLTFWNQVENGNWFDKSFALLFHNFMSRS-TGFLTFDLKQLS 327
Query: 336 EVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQAILPKGAI--IRRKVGEY 393
+ SLLM +G + ST GGI++ TF I I + RRK+
Sbjct: 328 QASTFLTSLLMFIGSAPASTGGGIRV----TTFWIFILVIISRIRGSQDVNAFRRKITTD 383
Query: 394 EFSEDEIQEVLGFTMTYF-----AFLLFGTIYMMLRLGAKFADALFESASAIGNVGLSVG 448
+ I + + F +F L +I + + +FE SA G GLS G
Sbjct: 384 KVVSASIVFFISLVLVIFLVFVASFSLDDSINRGKTIPYQIHHLIFEVTSAFGTSGLSTG 443
Query: 449 ITSPLLPPDIKVLLITLMWVGRLEIFSTI 477
+ L +V + +M +G+L I S I
Sbjct: 444 LIRDLSTVS-QVGFMIIMLIGQLGITSFI 471
>pir||S75455 Na+-ATPase chain J - Synechocystis sp. (strain PCC 6803)
>gi|1653100|dbj|BAA18016.1| (D90911) Na+ -ATPase subunit
J [Synechocystis sp.]
Length = 444
Score = 70.2 bits (169), Expect = 5e-11
Identities = 95/401 (23%), Positives = 166/401 (40%), Gaps = 41/401 (10%)
Query: 111 SLFETMSAWTGTGLTMMSHLESYPKVILFWRAW----MQWLGGIGIVLVALTILIRPGVA 166
+LF SA TGL+++ K FW + LGG+G + + ++I G
Sbjct: 39 ALFTATSAVCVTGLSVVD----VNKYFSFWGELTVMLLAQLGGLGYMTLTTFLMILIGRK 94
Query: 167 ---AARLYRAEARSERILPNFVNTAKIIVQIYTLLTLVGAYLYYINGM-------SLFDA 216
R E+ R N K ++ + + G + + + +L+ A
Sbjct: 95 FDLQQRFAIQESFDHRFAQGSNNLIKSVIATTLIFEVTGTIVLFFVFLQDYPPPRALWYA 154
Query: 217 FIHSMTGLGTGGMSSH-DLSIGYFHSLSIEIITVFLMIMGAVNFTV----HYKVFRD--K 269
HS++ G S D IGY S+ + + L+I G + + V ++ + R K
Sbjct: 155 VFHSVSAFNNAGFSLFADNLIGYQTSVPLNLTVSALIIFGGIGYQVIIESYFWLVRKVKK 214
Query: 270 SLRNFFKDIQVK-----TMFYLLAATIPLMTVSLI---SYGHFNPIRALRESIFHAVSAI 321
S R F + ++ T+F LL ++ + ++ F+ L + F +V+
Sbjct: 215 SQRPFAFSLNLRVVVRVTIFLLLLGFFGILILEAQGNRAFAQFSFQDRLLVAWFQSVTTR 274
Query: 322 TCTGFGIGNLANYPEVDKVFLSLLMVVGGSAGSTAGGIKLIRIALTFESLKWTIQQAILP 381
T GF +L V + LLM +G S T GGIK A+ + ++
Sbjct: 275 TA-GFNTIDLNELSSTSLVLVMLLMFIGASPSGTGGGIKTTTFAILANCTRSALRGQ--- 330
Query: 382 KGAIIRRKVGEYEFSEDEIQEVLGFTMTYFAFLLFGTIYMMLRLGAKFADALFESASAIG 441
+ II + + I V G +T + + ++ + L + FE+ SA
Sbjct: 331 ERVIIDDRCIPPQLILKAIAVVFGSMVTVISSI---SLLIFLESEQEAVSLAFEAVSAFA 387
Query: 442 NVGLSVGITSPLLPPDIKVLLITLMWVGRLEIFSTIVFIVG 482
VGLS+G T+P L P +++LI M++GR+ I + IVG
Sbjct: 388 TVGLSLG-TTPELKPLSQLVLIVTMFIGRVGITILMAAIVG 427
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.329 0.143 0.424
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171039142
Number of Sequences: 2977
Number of extensions: 6888927
Number of successful extensions: 22287
Number of sequences better than 1.0e-10: 37
Number of HSP's better than 0.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 22080
Number of HSP's gapped (non-prelim): 57
length of query: 493
length of database: 189,106,746
effective HSP length: 54
effective length of query: 439
effective length of database: 156,788,448
effective search space: 68830128672
effective search space used: 68830128672
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.8 bits)
S2: 167 (69.5 bits)