BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0249 (PAB0249) DE:ABC transporter, ATP-binding protein
(280 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc... 554 e-157
pir||G71192 probable cobalt transport ATP-binding protein - Pyro... 487 e-137
sp|P40735|YBXA_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 214 1e-54
gb|AAK42084.1| ABC transporter, ATP binding protein. [Sulfolobus... 199 3e-50
gb|AAK42217.1| ABC transporter [Sulfolobus solfataricus] 196 3e-49
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 192 3e-48
pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) P... 192 5e-48
pir||B71234 probable transport protein - Pyrococcus horikoshii >... 190 1e-47
pir||A69095 cobalt transport ATP-binding protein O - Methanobact... 185 5e-46
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 184 1e-45
gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [S... 179 4e-44
pir||G69043 cobalt transport ATP-binding protein O - Methanobact... 178 6e-44
pir||D69159 methyl coenzyme M reductase system, component A2 hom... 175 4e-43
pir||T44412 ABC transporter (ATP-binding protein) homolog ybxA [... 175 7e-43
pir||H69858 cation ABC transporter (ATP-binding protein) homolog... 172 5e-42
pir||E82879 ABC transporter UU539 [imported] - Ureaplasma urealy... 170 1e-41
emb|CAB93444.1| (AL357591) putative ABC transporter ATP-binding ... 162 3e-39
pir||E69742 ABC transporter (ATP-binding protein) homolog ybaE -... 159 4e-38
dbj|BAB03884.1| (AP001507) ABC transporter (ATP-binding protein)... 156 2e-37
gi|11466425 probable transport protein [Mesostigma viride] >gi|7... 156 3e-37
sp|Q50294|Y179_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 153 3e-36
pir||C64496 ABC transporter ATP-binding protein - Methanococcus ... 152 3e-36
sp|P47425|Y179_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 151 1e-35
pir||E72224 ABC transporter, ATP-binding protein - Thermotoga ma... 149 3e-35
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 148 5e-35
emb|CAB59657.1| (AL132674) putative ABC transport protein, ATP-b... 148 7e-35
gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, A... 148 9e-35
pir||C75369 amino acid ABC transporter, ATP-binding protein - De... 147 1e-34
pir||B75082 phosphate abc transporter, ATP-binding protein (pstb... 147 2e-34
sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64... 146 2e-34
gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein ... 146 3e-34
pir||T03543 probable cobalt transport system ATP-binding protein... 145 4e-34
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 145 4e-34
sp|Q58418|PSTB_METJA PROBABLE PHOSPHATE TRANSPORT ATP-BINDING PR... 145 6e-34
pir||C82266 ABC transporter, ATP-binding protein VC0907 [importe... 145 6e-34
pir||G83351 probable ATP-binding component of ABC transporter PA... 145 8e-34
sp|P55662|Y4TH_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 144 1e-33
sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 143 2e-33
pir||F82922 phosphate transport ATP-binding protein B UU200 [imp... 142 4e-33
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 142 4e-33
pir||G69633 glutamine transport protein glnQ - Bacillus subtilis... 142 4e-33
gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dp... 141 7e-33
sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 141 9e-33
sp|P75186|PSTB_MYCPN PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PST... 141 1e-32
gi|9507702 hypothetical protein [Plasmid pNZ4000] >gi|5123518|gb... 141 1e-32
sp|P30750|ABC_ECOLI ATP-BINDING PROTEIN ABC >gi|7445928|pir||G64... 139 3e-32
dbj|BAB06693.1| (AP001517) alkylphosphonate ABC tranporter (ATP-... 139 3e-32
dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia c... 139 3e-32
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 139 3e-32
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 139 3e-32
gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Strepto... 139 3e-32
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 139 4e-32
gi|11499426 cobalt transport ATP-binding protein (cbiO-2) [Archa... 139 4e-32
pir||S76536 hypothetical protein - Synechocystis sp. (strain PCC... 139 4e-32
gi|11467821 probable transport protein [Nephroselmis olivacea] >... 138 1e-31
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 138 1e-31
dbj|BAB05182.1| (AP001512) ABC transporter (ATP-binding protein)... 138 1e-31
pir||F81363 probable glutamine transport ATP-binding protein Cj0... 137 1e-31
gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archa... 137 2e-31
pir||H64716 ABC transporter, ATP-binding protein - Helicobacter ... 136 2e-31
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 136 3e-31
emb|CAB65561.1| (AL136058) probable amino acid ABC transporter p... 136 3e-31
pir||F83488 probable ATP-binding component of ABC transporter PA... 136 3e-31
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 136 4e-31
pir||E72757 probable phosphate transport ATP-binding protein pst... 135 5e-31
sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 135 5e-31
pir||S77760 probable ABC-type transport protein - Mycoplasma cap... 135 7e-31
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 135 7e-31
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 135 7e-31
pir||E83012 probable ATP-binding component of ABC transporter PA... 135 7e-31
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 135 7e-31
pir||F71800 ABC transporter, ATP-binding protein - Helicobacter ... 134 9e-31
gi|7524830 sulfate transport system permease protein [Chlorella ... 134 1e-30
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 134 1e-30
dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein)... 134 1e-30
gb|AAG20427.1| (AE005115) cobalt transport ATP-binding protein; ... 134 1e-30
pir||B75270 ABC transporter, ATP-binding protein - Deinococcus r... 134 1e-30
gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori] 133 2e-30
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 133 2e-30
pir||T35147 glutamate uptake system ATP-binding protein - Strept... 133 2e-30
sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA... 133 3e-30
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 133 3e-30
sp|P47426|Y180_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 132 3e-30
sp|Q05596|CBIO_SALTY COBALT TRANSPORT ATP-BINDING PROTEIN CBIO >... 132 3e-30
emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-b... 132 3e-30
sp|P47650|PSTB_MYCGE PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PST... 132 4e-30
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 132 4e-30
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 132 4e-30
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 132 6e-30
sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 132 6e-30
sp|P07655|PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PST... 131 7e-30
pir||B70127 phosphate ABC transporter, ATP-binding protein (pstB... 131 7e-30
pir||A82376 amino acid ABC transporter, ATP-binding protein VC00... 131 7e-30
pir||F64751 probable ABC-type transport protein b0262 - Escheric... 131 1e-29
sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 131 1e-29
pir||E69098 phosphate transport system ATP-binding - Methanobact... 131 1e-29
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 131 1e-29
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 131 1e-29
gi|11498955 phosphate ABC transporter, ATP-binding protein (pstB... 131 1e-29
pir||E81936 probable amino acid permease ATP-binding protein NMA... 131 1e-29
gi|10954682 probable mikimopine transporter gene~similar to potA... 131 1e-29
gb|AAB01532.1| (U38418) ProV [Bacillus subtilis] 130 2e-29
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 130 2e-29
pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0... 130 2e-29
sp|P46341|YQGJ_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 130 2e-29
sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TR... 130 2e-29
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 130 2e-29
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 129 3e-29
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 129 4e-29
pir||A72401 ABC transporter, ATP-binding protein - Thermotoga ma... 129 4e-29
pir||C48518 ABC-type transport protein (PEB1 5' region) - Campyl... 129 5e-29
sp|P41076|GLTL_ECOLI GLUTAMATE/ASPARTATE TRANSPORT ATP-BINDING P... 129 5e-29
sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ... 129 5e-29
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 129 5e-29
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 129 5e-29
pir||T43868 phosphate transport system peripheral membrane prote... 129 5e-29
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 129 5e-29
pir||H72275 phosphate ABC transporter, ATP-binding protein - The... 128 6e-29
pir||E83001 probable ATP-binding component of ABC transporter PA... 128 6e-29
sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 128 8e-29
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 128 8e-29
sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 127 1e-28
sp|Q50293|Y180_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 127 1e-28
pir||D69068 methyl coenzyme M reductase system, component A2 hom... 127 1e-28
gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. al... 127 1e-28
pir||H83240 probable ATP-binding component of ABC transporter PA... 127 1e-28
dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-bindin... 127 1e-28
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 127 2e-28
pir||C82957 probable ATP-binding component of ABC transporter PA... 127 2e-28
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 126 2e-28
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 126 2e-28
gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacte... 126 2e-28
emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coe... 126 2e-28
dbj|BAB06710.1| (AP001517) phosphate ABC transporter (ATP-bindin... 126 2e-28
pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879... 126 3e-28
pir||B45917 nucleotide-binding protein proV - Salmonella typhimu... 125 4e-28
pir||S74808 ABC-type transport protein slr1735 - Synechocystis s... 125 4e-28
pir||E83478 probable ATP-binding component of ABC transporter PA... 125 4e-28
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 125 6e-28
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 125 7e-28
emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lac... 124 1e-27
pir||F81947 probable amino acid permease ATP-binding protein NMA... 124 1e-27
pir||F83122 probable ATP-binding component of ABC transporter PA... 124 1e-27
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 124 1e-27
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 124 1e-27
gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus ... 123 2e-27
pir||I41113 abc protein - Escherichia coli >gi|145169|gb|AAC3686... 123 2e-27
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 123 2e-27
sp|Q58206|Y796_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 123 2e-27
sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 123 2e-27
pir||D71649 glutamine transport ATP-binding protein glnq (glnQ2)... 123 2e-27
gb|AAF25533.1|AF104994_3 (AF104994) ATP-binding protein [Strepto... 123 2e-27
pir||D82879 ABC Transporter UU538 [imported] - Ureaplasma urealy... 123 2e-27
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 123 2e-27
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 123 3e-27
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 123 3e-27
gb|AAD51880.1|AF102556_4 (AF102556) ATP-binding protein [Salmone... 122 4e-27
pir||F81348 ABC transport system ATP-binding protein Cj0774c [im... 122 4e-27
gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD... 122 6e-27
pir||G70390 phosphate transport ATP binding protein - Aquifex ae... 121 8e-27
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 121 8e-27
pir||S05329 inner membrane protein malK - Salmonella typhimurium 121 1e-26
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 121 1e-26
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 121 1e-26
pir||D72289 oligopeptide ABC transporter, ATP-binding protein - ... 121 1e-26
pir||E81023 ABC transporter, ATP-binding protein NMB1948 [import... 121 1e-26
pir||E81968 probable ABC transport ATP-binding subunit NMA0504 [... 121 1e-26
pir||A72452 probable peptide transport ATP-binding protein APE22... 120 1e-26
gi|9507703 hypothetical protein [Plasmid pNZ4000] >gi|5123519|gb... 120 1e-26
gb|AAG18995.1| (AE004999) phosphate transport ATP-binding; PstB2... 120 1e-26
gb|AAD22041.1| (AF118229) ATP-binding cassette protein PstB [Str... 120 2e-26
pir||G72578 probable ABC transporter ATP-binding protein APE1911... 120 2e-26
pir||E70141 oligopeptide transport ATP-binding protein oppD - Ly... 120 2e-26
pir||D69763 ferrichrome ABC transporter (ATP-binding p) homolog ... 119 3e-26
sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 119 4e-26
sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 119 4e-26
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 119 4e-26
pir||MMECMK inner membrane protein malK - Escherichia coli >gi|4... 118 5e-26
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 118 5e-26
gb|AAD10861.1| (U60994) orf k; putative ATP-binding cassette tra... 118 5e-26
gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC1... 118 7e-26
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 118 9e-26
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 118 9e-26
pir||A64455 methyl coenzyme M reductase (EC 1.8.-.-) component A... 117 1e-25
gi|11498986 branched-chain amino acid ABC transporter, ATP-bindi... 117 1e-25
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 117 2e-25
pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AA... 117 2e-25
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 117 2e-25
gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, comp... 117 2e-25
gb|AAB59057.1| (J01648) malK [Escherichia coli] 116 2e-25
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 116 2e-25
sp|P02915|HISP_SALTY HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 116 3e-25
pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permeas... 116 3e-25
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 116 3e-25
pir||C72576 probable glutamine transport ATP-binding protein APE... 116 4e-25
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 116 4e-25
sp|P46920|OPAA_BACSU GLYCINE BETAINE TRANSPORT ATP-BINDING PROTE... 115 5e-25
dbj|BAA08932.1| (D50453) glycine betain/L-proline transport ATPa... 115 5e-25
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 115 5e-25
pir||D83281 histidine transport protein HisP PA2926 [imported] -... 115 5e-25
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 115 5e-25
sp|P54954|YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 115 6e-25
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 115 6e-25
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 115 6e-25
sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 115 8e-25
sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK) >... 115 8e-25
gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus ... 115 8e-25
pir||D72083 transport ATP binding protein - Chlamydophila pneumo... 115 8e-25
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 115 8e-25
gb|AAF73656.1| (AE002196) ABC transporter, ATP-binding protein [... 115 8e-25
pir||E83248 probable ATP-binding component of ABC transporter PA... 115 8e-25
pir||A71351 probable cobalt ABC transporter, ATP-binding protein... 114 1e-24
sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC >... 114 1e-24
pir||E70584 phosphate transport ATP-binding protein pstB - Mycob... 114 1e-24
pir||T35450 ABC transporter ATP binding protein - Streptomyces c... 114 1e-24
pir||F72604 probable high-affinity branched-chain amino acid tra... 114 1e-24
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 114 1e-24
gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius] 114 1e-24
pir||A27835 histidine transport protein hisP - Escherichia coli ... 113 2e-24
pir||S54863 ABC transporter PstB chain - Mycobacterium tuberculo... 113 2e-24
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 113 2e-24
pir||C81352 lipid export ABC transport protein Cj0803 [imported]... 113 2e-24
gb|AAD33527.2|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]... 113 2e-24
sp|P45031|YRBF_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 113 2e-24
gi|11497837 branched-chain amino acid ABC transporter, ATP-bindi... 113 2e-24
gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeri... 113 2e-24
sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 113 3e-24
gb|AAA78896.1| (U13043) membrane associated ATPase [Propionibact... 113 3e-24
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 113 3e-24
dbj|BAB03338.1| (AB035453) ABC transporter [Staphylococcus aureus] 113 3e-24
sp|P45095|DPPD_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP... 112 4e-24
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T... 112 4e-24
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur... 112 4e-24
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 112 5e-24
gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPa... 112 5e-24
sp|P11599|HLYB_PROVU HEMOLYSIN SECRETION ATP-BINDING PROTEIN >gi... 111 7e-24
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 111 7e-24
sp|P47546|Y304_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 111 7e-24
dbj|BAB07691.1| (AP001520) ABC transporter required for expressi... 111 7e-24
sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 111 9e-24
gi|11498996 iron (III) ABC transporter, ATP-binding protein (hem... 111 9e-24
gi|10957146 cytolysin B transport protein [Lactococcus lactis] >... 111 9e-24
sp|P08716|HLYB_ECOLI HEMOLYSIN SECRETION ATP-BINDING PROTEIN, PL... 111 1e-23
sp|P10089|HLY2_ECOLI HEMOLYSIN SECRETION ATP-BINDING PROTEIN, CH... 111 1e-23
pir||D72415 zinc ABC transporter, ATP-binding protein - Thermoto... 111 1e-23
sp|P43245|MDR1_RAT MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEI... 110 2e-23
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 110 2e-23
pir||F75035 iron (iii) abc transporter, ATP-binding protein (hem... 110 2e-23
gb|AAC45331.1| (U97348) ATP-binding protein homolog [Lactobacill... 110 2e-23
dbj|BAA35517.1| (D90720) Hypothetical ABC transporter ATP-bindin... 110 2e-23
pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC... 110 2e-23
sp|P75796|YLIA_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 110 2e-23
sp|P50980|OPPD_LACLC OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 109 3e-23
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 109 3e-23
sp|Q9WYI7|Y352_THEMA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 109 3e-23
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 109 3e-23
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 109 3e-23
sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 109 4e-23
pir||T35723 cobalt transport system ATP-binding protein cbiO - S... 109 4e-23
pir||E64820 probable oligopeptide transport protein - Escherichi... 109 5e-23
gb|AAD09218.1| (U73183) ABC transporter ATP binding subunit [Str... 109 5e-23
dbj|BAB04800.1| (AP001510) ferrichrome ABC transporter (ATP-bind... 109 5e-23
sp|P75355|Y304_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 108 6e-23
pir||S73735 abc transport ATP-binding protein artP - Mycoplasma ... 108 8e-23
sp|P75356|Y303_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 108 8e-23
emb|CAA94219.2| (Z70268) Similarity to C.elegans p-glycoprotein ... 108 8e-23
emb|CAA94220.2| (Z70268) Similarity to C.elegans p-glycoprotein ... 108 8e-23
pir||E83082 probable ATP-binding component of ABC transporter PA... 108 8e-23
pir||C81187 ABC transporter, ATP-binding protein NMB0549 [import... 108 1e-22
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 107 1e-22
sp|P21449|MDR2_CRIGR MULTIDRUG RESISTANCE PROTEIN 2 (P-GLYCOPROT... 107 2e-22
emb|CAA64782.1| (X95538) PstB subunit of ABC transporter [Mycoba... 107 2e-22
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 107 2e-22
pir||C82526 ABC transporter ATP-binding protein XF2695 [imported... 107 2e-22
sp|P72297|OCCP_RHIME OCTOPINE PERMEASE ATP-BINDING PROTEIN P >gi... 106 2e-22
gi|10955083 agaD [Agrobacterium tumefaciens] >gi|11346288|pir||T... 106 2e-22
pir||T18939 hypothetical protein C05A9.1 - Caenorhabditis elegan... 106 2e-22
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 106 2e-22
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 106 2e-22
pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AA... 106 3e-22
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 106 3e-22
gb|AAF73568.1| (AE002322) ABC transporter, ATP-binding protein [... 106 3e-22
gi|6755046 ATP-binding cassette, sub-family B, member 1; P glyco... 106 4e-22
pir||C69223 anion permease - Methanobacterium thermoautotrophicu... 106 4e-22
dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein)... 106 4e-22
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 106 4e-22
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 105 5e-22
dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding pr... 105 5e-22
emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport s... 105 5e-22
pir||E71536 probable transport ATP binding protein - Chlamydia t... 105 7e-22
pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyroco... 105 7e-22
pir||S16298 ferric enterobactin transport protein fepC - Escheri... 104 9e-22
gi|11498042 iron (III) ABC transporter, ATP-binding protein (hem... 104 9e-22
dbj|BAA87071.1| (AB029153) multi-drug resistance related mRNA [F... 104 9e-22
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 104 9e-22
sp|P49938|FHUC_BACSU FERRICHROME TRANSPORT ATP-BINDING PROTEIN F... 104 1e-21
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA... 104 1e-21
gi|10957420 iron ABC transporter, ATP-binding protein [Deinococc... 104 1e-21
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 104 1e-21
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 104 2e-21
gi|10955056 occP [Agrobacterium tumefaciens] >gi|464298|sp|P3511... 104 2e-21
gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-bindin... 103 2e-21
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING P... 103 2e-21
pir||G70022 iron(III) dicitrate transport permease homolog yusV ... 103 2e-21
pir||C81916 probable ABC transporter ATP-binding protein NMA0729... 103 2e-21
gb|AAA72361.1| (L11748) methyl coenzyme M reductase system compo... 103 3e-21
pir||B36921 methyl coenzyme M reductase (EC 1.8.-.-) component A... 103 3e-21
pir||B64458 high-affinity branched-chain amino acid transport AT... 103 3e-21
gb|AAB85511.1| (AE000874) methyl coenzyme M reductase system, co... 103 3e-21
pir||T44413 ABC transporter (ATP-binding protein) homolog ybaE [... 103 3e-21
gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceu... 103 3e-21
dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 103 3e-21
pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC -... 102 4e-21
gb|AAF67494.1|AF170880_1 (AF170880) NovA [Streptomyces spheroides] 102 4e-21
gb|AAK42946.1| ABC transporter, ATP binding protein (branched ch... 102 5e-21
pir||E71067 probable ferrichrome transport ATP-binding protein -... 102 6e-21
pir||T46950 probable ATPase component of 2-aminoethylphosphonate... 101 8e-21
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 101 8e-21
pir||T48007 P-glycoprotein homolog T17J13.110 [similarity] - Ara... 101 8e-21
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 101 1e-20
pir||F75026 oligopeptide transport ATP-binding protein appf. PAB... 101 1e-20
emb|CAB60262.1| (AJ250862) MrsT protein [Bacillus sp. HIL-Y85/54... 100 2e-20
pir||B83282 probable ATP-binding component of ABC transporter PA... 100 2e-20
gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sul... 100 3e-20
gb|AAF69534.1|AC008007_9 (AC008007) F12M16.17 [Arabidopsis thali... 99 4e-20
emb|CAA75922.1| (Y15990) P-glycoprotein-like protein [Arabidopsi... 99 5e-20
pir||F71211 probable oligopeptide transport ATP-binding protein ... 99 5e-20
gb|AAD22644.1|AC007138_8 (AC007138) P-glycoprotein-like protein ... 99 5e-20
sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 98 9e-20
pir||S75352 ABC-type transport protein slr2019 - Synechocystis s... 98 2e-19
sp|Q07734|OPPF_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 97 2e-19
emb|CAA91229.1| (Z56283) orf1 [Lactobacillus helveticus] 97 2e-19
emb|CAB92552.1| (AJ275980) FecE protein [Serratia sp. ATCC39006] 97 2e-19
pir||A83142 probable ATP-binding component of ABC transporter PA... 97 2e-19
pir||E71045 probable ABC transporter - Pyrococcus horikoshii >gi... 97 3e-19
dbj|BAB05796.1| (AP001514) oligopeptide ABC transporter (ATP-bin... 97 3e-19
pir||T36431 probable ABC-type transport system ATP-binding prote... 96 3e-19
pir||A64409 ferric enterobactin transport ATP-binding protein ho... 96 5e-19
sp|P47545|Y303_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 96 6e-19
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 95 8e-19
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 95 1e-18
dbj|BAA36463.1| (AB015053) ABC protein [Pseudomonas fluorescens] 94 1e-18
gb|AAC69845.1| (AF076684) oligopeptide transporter putative ATPa... 93 3e-18
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 93 4e-18
pir||C75255 iron ABC transporter, ATP-binding protein - Deinococ... 92 7e-18
gb|AAD48154.1|AF086618_1 (AF086618) ABC transporter homolog [Loo... 91 1e-17
sp|Q61102|ABC7_MOUSE ATP-BINDING CASSETTE, SUB-FAMILY B, MEMBER ... 90 2e-17
gb|AAG20605.1| (AE005130) ferrichrome ABC transporter ATP-bindin... 90 2e-17
sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 90 3e-17
pir||T36000 probable ABC-type transport system ATP-binding chain... 90 3e-17
sp|P33594|NIKE_ECOLI NICKEL TRANSPORT ATP-BINDING PROTEIN NIKE >... 89 8e-17
gb|AAD47141.1|AF078777_1 (AF078777) ABC transporter [Homo sapiens] 89 8e-17
pir||E82932 spermidine/putrescine transport ATP-binding protein ... 89 8e-17
dbj|BAA28861.1| (AB005289) ABC transporter 7 protein [Homo sapiens] 88 1e-16
gi|4757706 ATP-binding cassette, sub-family B, member 7; ATP-bin... 88 1e-16
sp|O75027|ABC7_HUMAN ATP-BINDING CASSETTE, SUB-FAMILY B, MEMBER ... 88 1e-16
gi|11421671 similar to ATP-binding cassette, sub-family B (MDR/T... 88 1e-16
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 88 1e-16
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 87 2e-16
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 87 2e-16
sp|Q07698|ABCA_AERSA ABCA PROTEIN >gi|541231|pir||A36918 ATP-bin... 87 3e-16
pir||C65145 nikE protein - Escherichia coli >gi|466616|gb|AAB184... 86 4e-16
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 86 4e-16
gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF... 86 5e-16
sp|P25371|ADP1_YEAST PROBABLE ATP-DEPENDENT PERMEASE PRECURSOR >... 85 7e-16
gi|10383780 Active transport ATPase; Adp1p [Saccharomyces cerevi... 85 7e-16
pir||F72428 oligopeptide ABC transporter, ATP-binding protein - ... 83 3e-15
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 82 6e-15
dbj|BAB07378.1| (AP001519) teichoic acid ABC transporter (ATP-bi... 82 6e-15
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 82 1e-14
gb|AAK43268.1| ABC transporter, ATP binding protein related prot... 80 3e-14
gb|AAK43187.1| ABC transporter, ATP binding protein, putative [S... 79 7e-14
gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; predic... 79 7e-14
gb|AAF53328.1| (AE003641) CG7491 gene product [Drosophila melano... 79 7e-14
gb|AAD34890.1|AF141932_1 (AF141932) rhiziobicin secretion protei... 78 9e-14
gb|AAC43181.1| (U00006) matches PS00017: ATP/GTP-binding site mo... 78 1e-13
sp|P32721|ALSA_ECOLI D-ALLOSE TRANSPORT ATP-BINDING PROTEIN ALSA... 78 1e-13
gb|AAK40512.1| Methyl coenzyme M reductase system, component A2 ... 78 1e-13
sp|P42246|YCBN_BACSU HYPOTHETICAL 31.7 KD PROTEIN IN GLTP-CWLJ I... 77 3e-13
pir||T50518 ABC transporter-like protein - Arabidopsis thaliana ... 77 3e-13
emb|CAC14305.1| (AJ276209) putative ATP-binding protein of an AB... 77 3e-13
pir||T36316 probable ABC-type transport system ATP-binding prote... 76 3e-13
pir||DVLNS multidrug resistance protein - Leishmania tarentolae 73 4e-12
pir||S77512 ABC-type transport protein slr1901 - Synechocystis s... 73 5e-12
pir||T31958 hypothetical protein F02E11.1 - Caenorhabditis elega... 72 6e-12
gb|AAF46706.1| (AE003453) CG10505 gene product [Drosophila melan... 72 6e-12
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 72 6e-12
pir||T45239 probable ABC transporter ATP-binding protein [import... 72 8e-12
pir||E72470 probable ABC transporter ATP-binding protein APE2406... 72 8e-12
sp|P21441|MDR_LEITA MULTIDRUG RESISTANCE PROTEIN (P-GLYCOPROTEIN... 71 2e-11
pir||D70867 hypothetical protein Rv2477c - Mycobacterium tubercu... 70 3e-11
dbj|BAA06478.1| (D30808) branched-chain amino acid transport pro... 69 6e-11
>pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyrococcus abyssi
(strain Orsay) >gi|5457805|emb|CAB49295.1| (AJ248284)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 280
Score = 554 bits (1413), Expect = e-157
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN
Sbjct: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM
Sbjct: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE
Sbjct: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER
Sbjct: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
Query: 241 IGIRIPTRVKIGYELKKRGITRRAVLSYEEIIAEIAKQLR 280
IGIRIPTRVKIGYELKKRGITRRAVLSYEEIIAEIAKQLR
Sbjct: 241 IGIRIPTRVKIGYELKKRGITRRAVLSYEEIIAEIAKQLR 280
>pir||G71192 probable cobalt transport ATP-binding protein - Pyrococcus
horikoshii >gi|3258251|dbj|BAA30934.1| (AP000007) 284aa
long hypothetical cobalt transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 284
Score = 487 bits (1241), Expect = e-137
Identities = 234/272 (86%), Positives = 259/272 (95%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
MN+IEVE+VSF+YGNS+ YSLR +NL ++KGEFLGIIGPSGSGKSTFCLTLNGLIPHSI
Sbjct: 1 MNVIEVEDVSFRYGNSREYSLRHINLEIRKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIA 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
GEF GNV VDGLNTREHSV+ELST+VGLVFQNPDSQLFNMTVLEEVAFALENLG+ER+EM
Sbjct: 61 GEFHGNVIVDGLNTREHSVSELSTKVGLVFQNPDSQLFNMTVLEEVAFALENLGIERDEM 120
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
WRRIRWALKLV+LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE
Sbjct: 121 WRRIRWALKLVRLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
EVL L++LLNKEEKITIILVEHNTDFLLEHADRIVVFD GR+V+EGKPE+VFENVEFL
Sbjct: 181 EVLGLIKLLNKEEKITIILVEHNTDFLLEHADRIVVFDKGRIVLEGKPEDVFENVEFLRT 240
Query: 241 IGIRIPTRVKIGYELKKRGITRRAVLSYEEII 272
IG+++PTRVKIGYELKKRG+ RAVL+ +E++
Sbjct: 241 IGVKLPTRVKIGYELKKRGLVERAVLTRDEVV 272
>sp|P40735|YBXA_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBXA
>gi|7445713|pir||E69751 ABC transporter (ATP-binding
protein) homolog ybxA - Bacillus subtilis
>gi|1644202|dbj|BAA10983.1| (D64126) unknown [Bacillus
subtilis] >gi|2632412|emb|CAB11921.1| (Z99104) alternate
gene name: ybaD~similar to ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 281
Score = 214 bits (539), Expect = 1e-54
Identities = 119/276 (43%), Positives = 180/276 (65%), Gaps = 10/276 (3%)
Query: 3 IIEVENVSFKYG-NSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSIN 60
+I VE++ F+Y +++ +L V+L V +GE+L I+G +GSGKST LNGLI P S
Sbjct: 6 LISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPES-- 63
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++ V G+ E SV E+ ++G+VFQNPD+Q F TV ++VAF LEN GV REEM
Sbjct: 64 ----GDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFFGTTVRDDVAFGLENNGVPREEM 119
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ WA+K V + D ++ P +LSGG+KQR+AIA V+ +P +++LDE TS LDP+GRE
Sbjct: 120 IERVDWAVKQVNMQDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGRE 179
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
EVL VR L ++ T+I + H+ + + ADRI+V +GG+ EG PEE+F+ + L R
Sbjct: 180 EVLETVRHLKEQGMATVISITHDLNEAAK-ADRIIVMNGGKKYAEGPPEEIFKLNKGLVR 238
Query: 241 IGIRIPTRVKIGYELKKRGIT-RRAVLSYEEIIAEI 275
IG+ +P ++ L++ G+ L+ E ++ E+
Sbjct: 239 IGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKEL 274
>gb|AAK42084.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 530
Score = 199 bits (501), Expect = 3e-50
Identities = 106/262 (40%), Positives = 160/262 (60%), Gaps = 4/262 (1%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +E+ ++ Y S+ L++++GE + I G SGSGKST +NG+IPH IN
Sbjct: 1 MKFVEIRDLQVTYMGKTKPSIVIDKLDIEEGESVLITGRSGSGKSTLVSVINGVIPHLIN 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
E +G V V GL+ + +E+S VG + Q+PD+Q FN TV++EVAF +EN V REEM
Sbjct: 61 AEVKGEVRVFGLDIKTTPTSEISRYVGTLLQDPDTQAFNYTVIDEVAFGVENYMVSREEM 120
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ ++K+ + R+ LSGGE QR +ASVL M+PK L+LDEPTS +DP G
Sbjct: 121 INRVEESMKICGISHLRDREINTLSGGELQRTVLASVLAMRPKALILDEPTSNIDPQGTR 180
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
E+L LV+ + E I+++LVEH + +L DRI+V + G++ ++ K +E+ + + L
Sbjct: 181 EILELVKTF-RSEGISLVLVEHKIERVLPFIDRIIVVESGKIAVDIKKDEIIDRADLLHS 239
Query: 241 IGIRIPTRVKIGYELKKRGITR 262
+G+ IP + LKK G R
Sbjct: 240 LGLEIPDYMLF---LKKSGFRR 258
Score = 104 bits (257), Expect = 1e-21
Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 4/228 (1%)
Query: 5 EVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFE 64
E+ S K L + +++K+G ++G +GSGK+T + GLI E
Sbjct: 281 EILFASVKVKTKSGKYLINTKISLKQGTITALMGKNGSGKTTLLKAIVGLIDKKRLIVEE 340
Query: 65 GNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRI 124
V V+G + + + E + + Q D TV +EV F+++N GV E R+
Sbjct: 341 EKVIVNGKDLSKAKLVERGKYLAYLPQFFDVMFIKRTVEDEVKFSMKNRGVYDE---MRL 397
Query: 125 RWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLS 184
L++ L R E P LS G+++R+A+ASV+ KV+++DEPTS D R+ +L
Sbjct: 398 GEILRIFSLDAYRTEDPLVLSMGQRRRVAMASVIAGGAKVILMDEPTSGQDWYHRQ-ILG 456
Query: 185 LVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
L + + TI++V H+ F+ D ++V G++V+EGKPEEVF
Sbjct: 457 KELLELRNKGYTILVVTHDARFVDRFTDYLLVMSDGKIVLEGKPEEVF 504
>gb|AAK42217.1| ABC transporter [Sulfolobus solfataricus]
Length = 530
Score = 196 bits (493), Expect = 3e-49
Identities = 103/272 (37%), Positives = 163/272 (59%), Gaps = 10/272 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +E+ ++ Y S+ L++++GE + I G SGSGKST +NG+IPH IN
Sbjct: 1 MKFVEIRDLQVTYMGKDKPSIVVDKLDIEEGESVLITGRSGSGKSTLVSVINGVIPHLIN 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
E +G V V G + + + E+S VG + Q+PD+Q FN T+++EVAF +EN + R+EM
Sbjct: 61 AEIKGEVRVFGFDVKSTPIHEISKYVGTLLQDPDTQAFNYTIIDEVAFGVENYMISRDEM 120
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ ++K+ + R+ LSGGE QR +ASVL M+PK L+LDEPTS +DP G
Sbjct: 121 IERVEESMKIYGISHLRDREINTLSGGELQRTILASVLAMRPKALILDEPTSNIDPQGTR 180
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
E+L LV+ + E I+++LVEH + +L DRI+V + G++ ++ + +E+ + +FL
Sbjct: 181 EILELVKTF-RSEGISLVLVEHKIERVLPFVDRIIVVEEGKIAVDVRKDEIVDKADFLYS 239
Query: 241 IGIRIPTRV---------KIGYELKKRGITRR 263
+G+ IP + KI YE ++ T R
Sbjct: 240 LGLEIPDYMLFLKKNGFRKIDYEYLRKTYTYR 271
Score = 112 bits (278), Expect = 4e-24
Identities = 80/247 (32%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 10 SFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFV 69
S K L + +++K+G ++G +GSGK+T + GLI E V V
Sbjct: 286 SVKVKTKNGIYLINTKISLKQGTITALMGKNGSGKTTLLKVIVGLIDKKRLIVEEEKVIV 345
Query: 70 DGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALK 129
+G++ + + E + + Q D TV +E+ F+++N G E +R+ LK
Sbjct: 346 NGVDLSKTKLVERGKFIAYLPQFFDVMFIKRTVEDEIKFSMKNRGTYDE---KRLGEVLK 402
Query: 130 LVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLL 189
+ L R+E P LS G+++R+A+ASVL KV+++DEPTS D R+ +L L
Sbjct: 403 MFSLDAYRKEDPLVLSMGQRRRVAMASVLAGGAKVILMDEPTSGQDWYHRQ-ILGKELLE 461
Query: 190 NKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRV 249
+++ TI++V H++ F+ AD ++V + G++V+EGKPEEVF ++ L R GI P
Sbjct: 462 LRDKGYTILVVTHDSRFVDRFADYLLVMNEGKIVLEGKPEEVF--IKSL-RHGIEPPLEY 518
Query: 250 KIGYELK 256
++G +K
Sbjct: 519 ELGGLIK 525
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 192 bits (484), Expect = 3e-48
Identities = 102/248 (41%), Positives = 165/248 (66%), Gaps = 9/248 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M I+E +++ F+Y + A L+ +N VKKGE + ++GP+G+GKST L NG++ +
Sbjct: 1 MYIVETKDLYFRYPDGTAV-LKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPT-- 57
Query: 61 GEFEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
+G V + G + + S+ E+ VGLVFQNPD Q+F TV E+VAF NLG+ +E
Sbjct: 58 ---KGEVLIKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAPTVKEDVAFGPLNLGLPKE 114
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E+ +R++ ALK V + + P +LSGG+K+R+AIA +L M+P+V+VLDEPT+ LDP+G
Sbjct: 115 EVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVG 174
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
+++ L+ LNK + +TII+ H+ D + +AD++ V G+++ EG P+EVF +VE +
Sbjct: 175 ASKIMKLLYDLNK-KGMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEVFSDVETI 233
Query: 239 ERIGIRIP 246
+ +R+P
Sbjct: 234 RKANLRLP 241
>pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) PAB2260 -
Pyrococcus abyssi (strain Orsay)
>gi|5457563|emb|CAB49054.1| (AJ248283) cobalt ABC
transporter, ATP-binding protein (cbiO) [Pyrococcus
abyssi]
Length = 260
Score = 192 bits (482), Expect = 5e-48
Identities = 112/256 (43%), Positives = 158/256 (60%), Gaps = 10/256 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE ++V F Y + K Y L+ +N K G L I+GP+GSGK+T +NGL+
Sbjct: 1 MIEFKDVWFWYDDGK-YVLKSINFRFKGGT-LAIVGPNGSGKTTLVKMMNGLLKPK---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
+G+V +DG+NTR+ SVAE+S VG VFQNPD+ F V +EVAF NLG+ EE+ +
Sbjct: 55 -KGDVIIDGINTRDKSVAEMSRLVGYVFQNPDAMFFEENVFKEVAFGPRNLGLSEEEVEK 113
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+RWAL+ V L + P LSGGEKQRLAIA +L MKPK LVLDEP + LD G +
Sbjct: 114 RVRWALREVGLEGFEDRSPLELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLRGL 173
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIG 242
++++R L +E+ +IILV H+ + +LE AD +++ G + G E+ F+ L
Sbjct: 174 INVIRKL-REDNHSIILVTHDMELVLEVADEVLLLKDGEIKFFGPVEDFFK--LDLRNFS 230
Query: 243 IRIPTRVKIGYELKKR 258
+ P +KI ELK R
Sbjct: 231 LVEPEIIKIAKELKLR 246
>pir||B71234 probable transport protein - Pyrococcus horikoshii
>gi|3256518|dbj|BAA29201.1| (AP000001) 260aa long
hypothetical transport protein [Pyrococcus horikoshii]
Length = 260
Score = 190 bits (479), Expect = 1e-47
Identities = 111/253 (43%), Positives = 159/253 (61%), Gaps = 10/253 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE +V F Y K L+ ++ + +G L I+GP+GSGK+T LNGL+
Sbjct: 1 MIEFRDVWFWYQEGKTV-LKSISFSFSEGT-LAIVGPNGSGKTTLVKMLNGLLKPK---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
+GNV +DG+NT+E SVAELS VG VFQNPD+ F V +EVAF +NLG+ EE+ +
Sbjct: 55 -KGNVLIDGINTKEVSVAELSRIVGYVFQNPDAMFFEENVFKEVAFGPKNLGLNEEEVKK 113
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+RWAL+ V L P LSGGEKQRLAIA +L MKPK LVLDEP + LD G +++
Sbjct: 114 RVRWALEAVGLRGFENRNPFELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLQDL 173
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIG 242
+++++ L +E +IILV H+ + +LE AD++++ G + G +E FE LE G
Sbjct: 174 INVIKNLRREGS-SIILVTHDIELVLEVADKVLLLKDGELKFFGSTKEFFE--LDLEGFG 230
Query: 243 IRIPTRVKIGYEL 255
++ P VKI ++
Sbjct: 231 LKEPELVKISKDV 243
>pir||A69095 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622836|gb|AAB86176.1| (AE000928) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 311
Score = 185 bits (465), Expect = 5e-46
Identities = 98/275 (35%), Positives = 170/275 (61%), Gaps = 9/275 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE+ ++S+ Y + +LR +N+ V++GE + +IGP+G+GKST L LNG++ +
Sbjct: 1 MIELRDLSYSYPDGTP-ALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKPAA--- 56
Query: 63 FEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G V +DG ++ + + ++ +VG+VFQNPD QLF+ TV E+VAF NLG+ +E+
Sbjct: 57 --GEVIIDGERVDYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMNLGLPEDEV 114
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ +L+ V + P +LSGGEK+R+AIA +L MKP+++VLDEPT+ LDP +
Sbjct: 115 EERVAESLEKVGMSGYENRAPHHLSGGEKKRVAIAGILAMKPEIMVLDEPTTGLDPETAD 174
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
++ ++ L++ E IT+++ H+ + + + A+R+ V + G ++ EG P E+F + E + R
Sbjct: 175 GIIRILLELSR-EGITVMISSHDVEIISQFAERVFVLNSGELIAEGTPLEIFRDAELIRR 233
Query: 241 IGIRIPTRVKIGYELKKRGITRRAVLSYEEIIAEI 275
+R+P + L+ G L+ EE E+
Sbjct: 234 ASLRLPRTADLLNRLRMAGFEVDVKLTVEETYHEL 268
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 184 bits (462), Expect = 1e-45
Identities = 98/248 (39%), Positives = 158/248 (63%), Gaps = 10/248 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M IIE N+ + Y + +L+ ++ + KKGE + ++GP+G+GKST L NG++ +
Sbjct: 1 MKIIEAVNIRYTYPDGTE-ALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPT-- 57
Query: 61 GEFEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
G V VDG ++ + + ++ +VG+VFQNPD QLF V E+VAF N+G++ +
Sbjct: 58 ---SGKVLVDGKEIDYSKSGLIKVRQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGLDED 114
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E+ R++ AL+ V + R + P +LSGGEK+R+AIA +L MKP +++LDEPTS LDP G
Sbjct: 115 EVEERVKDALRKVGMSGTRTD-PHHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRG 173
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
++L L+ LN EE +TII+ H+ D ++DRI + GG ++ EG P +VF +++ +
Sbjct: 174 ASQILRLLHELN-EEGMTIIISTHDVDLAPLYSDRIYIISGGEIISEGTPGDVFSDIDTI 232
Query: 239 ERIGIRIP 246
+R+P
Sbjct: 233 RGADLRLP 240
>gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [Streptococcus
pyogenes]
Length = 296
Score = 179 bits (449), Expect = 4e-44
Identities = 100/259 (38%), Positives = 162/259 (61%), Gaps = 9/259 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRD-VNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSIN 60
IIE++ V+F Y + D V+ +VK+GE+L IIG +GSGKST ++GL+ P S
Sbjct: 21 IIELKKVTFNYHKDQEKPTLDGVSFHVKQGEWLSIIGHNGSGKSTTIRLIDGLLEPES-- 78
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++ VDG +V E+ ++G+VFQNPD+Q TV ++VAF LEN G+ E++
Sbjct: 79 ----GSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDI 134
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ AL+LV + + +E+ P LSGG+KQR+AIA + MKPK+++LDE TS LDP GR
Sbjct: 135 KERVNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAVAMKPKIIILDEATSMLDPKGRL 194
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
E++ ++ + + ++T+I + H+ D + +DR++V G+V PE++F + L +
Sbjct: 195 ELIKTIKNIRDDYQLTVISITHDLD-EVALSDRVLVMKDGQVESTSTPEQLFARGDELLQ 253
Query: 241 IGIRIPTRVKIGYELKKRG 259
+G+ IP + L++ G
Sbjct: 254 LGLDIPFTTSVVQMLQEEG 272
>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 178 bits (447), Expect = 6e-44
Identities = 94/248 (37%), Positives = 152/248 (60%), Gaps = 9/248 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M IIE ++ + Y + +LR +N + ++GE + ++GP+G+GKST L NG++ +
Sbjct: 3 MRIIEAVDIRYTYPDGTE-ALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGILQPT-- 59
Query: 61 GEFEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
G + +DG L+ + + + +VG+VFQNPD QLF V E+VAF N+G+ +
Sbjct: 60 ---SGKIMIDGEELDYSKSGLIKARQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGLSED 116
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E+ R+R AL+ V + + P + SGGEK+R+AIA ++ MKP ++VLDEPTS LDP G
Sbjct: 117 EVEERVRDALQKVGMLGYESKPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRG 176
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
++L L+ LN EE +TII+ H+ D ++DRI + G ++ G P EVF +++ +
Sbjct: 177 ASQILRLLHNLN-EEGMTIIISTHDVDLAPLYSDRIYIISDGEIISTGAPSEVFSDIDTI 235
Query: 239 ERIGIRIP 246
+R+P
Sbjct: 236 RGANLRLP 243
>pir||D69159 methyl coenzyme M reductase system, component A2 homolog -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621521|gb|AAB84960.1| (AE000829) methyl coenzyme M
reductase system, component A2 homolog [Methanobacterium
thermoautotrophicum]
Length = 480
Score = 175 bits (440), Expect = 4e-43
Identities = 102/247 (41%), Positives = 153/247 (61%), Gaps = 6/247 (2%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+ I ++ VS++Y N + +LRDV+L VK+GE + I G SGSGKST + +IP +
Sbjct: 1 MDAILLDGVSYRYPNQERLALRDVSLRVKRGESVFITGRSGSGKSTLARAVTAVIPSMMG 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
GE +G V V G +T + +L+ VG VFQNP+SQ F + V EV+ + L +++ E
Sbjct: 61 GEMDGTVRVMGRDTDSLTPGDLAADVGYVFQNPESQFFTLNVNSEVSLGPDTLQLDKRE- 119
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ AL+ V + KR E NLS GEKQR+AIAS L M P++L++DEPTS LD +
Sbjct: 120 -ERVEDALRRVGMEHKRHESVFNLSEGEKQRVAIASQLSMSPEILLMDEPTSNLDQGSTD 178
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
++ S+++ L + T+IL++H T + E DR+VV D G +V E + + + EF ER
Sbjct: 179 DLFSILKNLRDK---TLILIDHRTYRVPEVFDRVVVMDEGMIVEETDTDNLLD-PEFRER 234
Query: 241 IGIRIPT 247
G+R P+
Sbjct: 235 YGLRSPS 241
Score = 111 bits (274), Expect = 1e-23
Identities = 75/222 (33%), Positives = 116/222 (51%), Gaps = 28/222 (12%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++ V N+S G+ + L VNL++ +GE LG+ GP+GSGK+T + GLI +
Sbjct: 271 VLRVMNISHTQGD---FRLDGVNLDLWRGEVLGLTGPNGSGKTTLARLIVGLIEPEM--- 324
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
G + V+G GLV Q+PD QLF TV E+ F L++ E
Sbjct: 325 --GEIRVEGT-------------AGLVMQDPDHQLFMDTVKREITFGLDDYSDGDVED-- 367
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
L+ +KL E P +LSGGEKQR I+ L KP ++++DEPT+ +D + +
Sbjct: 368 ----LLETMKLHQLMERHPHSLSGGEKQRTLISVYLFRKPDLIIMDEPTTGMDLDNMKRL 423
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVM 224
+ L K + +IL+ H+ +FL ADR ++ D G +V+
Sbjct: 424 AGWIGKL-KGMGVAMILISHDLEFLQMVADRTIMMDNGALVL 464
>pir||T44412 ABC transporter (ATP-binding protein) homolog ybxA [imported] -
Bacillus halodurans >gi|4512433|dbj|BAA75300.1|
(AB017508) ybxA homologue (identity of 50% to B.
subtilis ) [Bacillus halodurans]
>gi|10172776|dbj|BAB03883.1| (AP001507) ABC transporter
(ATP-binding protein) [Bacillus halodurans]
Length = 278
Score = 175 bits (438), Expect = 7e-43
Identities = 104/274 (37%), Positives = 166/274 (59%), Gaps = 9/274 (3%)
Query: 6 VENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEG 65
+E+VS++Y + A L++++++V GE++ +IGP+GSGKST LNGL+ + G
Sbjct: 7 LESVSYQYDANAAPVLKEIDIHVPLGEWVAVIGPNGSGKSTLAKLLNGLLLPT-----SG 61
Query: 66 NVFVDGLNTREHSVA-ELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRI 124
V +G++T + E+ +VGLVFQNP+ Q TV +++AF +EN G RE+M +RI
Sbjct: 62 RVTFNGMSTMDEGTHWEIRQQVGLVFQNPEHQFVATTVRDDLAFGMENRGFPREKMIQRI 121
Query: 125 RWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLS 184
V + +E P LSGG+KQR+AIA +L ++P V+V DE TS LDP GR++VL
Sbjct: 122 EEVSIQVGIDHLLDEEPHRLSGGQKQRVAIAGILAVEPSVIVFDEATSMLDPQGRKDVLE 181
Query: 185 LVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIR 244
++ L+ E +TII + H+ + A R+++ + G V+++G P VF + LE GI
Sbjct: 182 TMKQLH-ENGMTIISITHDVN-EASQAGRVLLLEKGEVMLDGSPAVVFHEQDKLEAAGID 239
Query: 245 IPTRVKIGYELKKRGI-TRRAVLSYEEIIAEIAK 277
P ++ L+ RGI A+L EE++ + K
Sbjct: 240 RPFAYQLQLALQSRGIQLEGALLKKEELVEALWK 273
>pir||H69858 cation ABC transporter (ATP-binding protein) homolog ykoD -
Bacillus subtilis >gi|2632042|emb|CAA05601.1| (AJ002571)
YkoD [Bacillus subtilis] >gi|2633676|emb|CAB13179.1|
(Z99110) similar to cation ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 490
Score = 172 bits (431), Expect = 5e-42
Identities = 89/247 (36%), Positives = 154/247 (62%), Gaps = 3/247 (1%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++ VE +SF Y + +D++ ++KGE + ++GPSG GKS+ L LNGL P + +G
Sbjct: 7 LLTVEQLSFSYEEDEKPVFQDISFELQKGECVLLLGPSGCGKSSLALCLNGLYPEACDGI 66
Query: 63 FEGNVFVDGLNTREHSVAELSTR-VGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
G+VF+ + +E T+ G+VFQ+PD Q +TV +E+AF LENL + +EEM
Sbjct: 67 QSGHVFLFQKPVTDAETSETITQHAGVVFQDPDQQFCMLTVEDEIAFGLENLQIPKEEMT 126
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
+I L +++ +E+ LSGG+KQ++A+A +L M+P++++LDEPTS LDP E
Sbjct: 127 EKINAVLGKLRITHLKEKMISTLSGGQKQKVALACILAMEPELIILDEPTSLLDPFSARE 186
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFD-GGRVVMEGKPEEVFEN-VEFLE 239
+ L++ L +E+ +++++EH D +R +V D G+ ++G + +F++ E L+
Sbjct: 187 FVHLMKDLQREKGFSLLVIEHQLDEWAPWIERTIVLDKSGKKALDGLTKNLFQHEAETLK 246
Query: 240 RIGIRIP 246
++GI IP
Sbjct: 247 KLGIAIP 253
Score = 90.5 bits (221), Expect = 2e-17
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSIN 60
+++EV ++SF G + +D++ ++++G ++GP+G+GKST L L+ P S
Sbjct: 293 SVLEVSSLSFARGQQAIF--KDISFSLREGSLTALVGPNGTGKSTLLSVLASLMKPQS-- 348
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G + + +++ EL R+G VFQNP+ Q TV +E+ F + E E+
Sbjct: 349 ----GKILLYDQPLQKYKEKELRKRMGFVFQNPEHQFVTDTVYDELLFG-QKANAETEKK 403
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+ + L L D P +S G+K+RL++A++L+ KVL+LDEPT D
Sbjct: 404 AQHLLQRFGLAHLADHH---PFAISQGQKRRLSVATMLMHDVKVLLLDEPTFGQDARTAA 460
Query: 181 EVLSLVRLLNKEEKITIILVE 201
E + +++ + E +++ +
Sbjct: 461 ECMEMIQRIKAEGTAVLMITQ 481
>pir||E82879 ABC transporter UU539 [imported] - Ureaplasma urealyticum
>gi|6899543|gb|AAF30952.1|AE002152_11 (AE002152) ABC
transporter [Ureaplasma urealyticum]
Length = 294
Score = 170 bits (427), Expect = 1e-41
Identities = 100/274 (36%), Positives = 156/274 (56%), Gaps = 7/274 (2%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
IE ENV F Y + L++V+ + E++ +IG +GSGKST L GL+
Sbjct: 27 IEFENVYFAYTEERMI-LKNVSFTINDNEYVCVIGHNGSGKSTISKVLTGLLKPK----- 80
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G + + G+ ++ L +G+VFQNPD+Q +T +++AF LEN V +MW
Sbjct: 81 SGVIKLFGIEISAANLKYLRNNIGIVFQNPDNQFVGITAEDDIAFGLENRKVPPNKMWDI 140
Query: 124 IRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
I A + D ++ LSGG+KQR+AIASVL + PKV++ DE TS LDP G+ E+
Sbjct: 141 INDAAVATGIEDLLKKESLELSGGQKQRVAIASVLAINPKVIIFDESTSMLDPKGKNELK 200
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGI 243
L+ L K TII + H+ + +++ AD+++V G V G P+E+F N E L ++ +
Sbjct: 201 ELMVSLRDVAKKTIISITHDMEEVVK-ADKVIVMSNGEVQYIGTPQEIFANEERLLKMQL 259
Query: 244 RIPTRVKIGYELKKRGITRRAVLSYEEIIAEIAK 277
IP +K+ LK++G+ L+ EE+I +I K
Sbjct: 260 DIPFTLKLAKTLKEKGLKIDLTLNNEELIEKICK 293
>emb|CAB93444.1| (AL357591) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 563
Score = 162 bits (407), Expect = 3e-39
Identities = 93/230 (40%), Positives = 136/230 (58%), Gaps = 1/230 (0%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I E+VS Y + ++R V+ V +GE + + GPSG GKST + GL+PH G
Sbjct: 1 MIRFEDVSVTYDGATEPTVRAVDFEVPEGELVLLAGPSGVGKSTVLGAVGGLVPHFTGGT 60
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
G V V G +TR H EL+ VG V Q+P S TV +E+A+ +E+LG+ + M R
Sbjct: 61 LRGRVTVAGRDTRTHKPRELADVVGTVGQDPLSHFVTDTVEDELAYGMESLGLPPDVMRR 120
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ L L+ L D R LSGG++QR+AI SVL P VLVLDEPTS LDP EEV
Sbjct: 121 RVEETLDLLGLSDLRSRPIATLSGGQQQRVAIGSVLTPHPDVLVLDEPTSALDPAAAEEV 180
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDG-GRVVMEGKPEEV 231
L++++ L + T+++ EH + ++++AD++V+ G + G P EV
Sbjct: 181 LAVLQRLVHDLGTTVLMAEHRLERVIQYADQVVLLPAPGEAPLIGAPAEV 230
Score = 83.1 bits (202), Expect = 3e-15
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 17 KAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTRE 76
+ +LR V+L V GE + ++G +G+GKST L GL+ S G+V
Sbjct: 328 RVQALRHVDLTVSPGETVALMGRNGAGKSTLLSALVGLVEPSA-----GSVRAGDAVPHR 382
Query: 77 HSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDK 136
+ +L RVGLV Q P L+ TV E A A + + R + L + D
Sbjct: 383 TAPRDLVRRVGLVPQEPRDLLYADTVAAECAAA--DRDADAAPGTCRALLSELLPGITD- 439
Query: 137 REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKIT 196
+ P +LS G++ LA++ VL +P +L+LDEPT LD + + ++R L E
Sbjct: 440 -DIHPRDLSEGQRLTLALSVVLTARPPLLLLDEPTRGLDYAAKARLAGILRGLAAEGH-A 497
Query: 197 IILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
I+L H+ + E A R+V+ G V+ +G +V
Sbjct: 498 IVLATHDVELAAELAHRVVLLAEGEVIADGPAADV 532
>pir||E69742 ABC transporter (ATP-binding protein) homolog ybaE - Bacillus
subtilis >gi|1644203|dbj|BAA10984.1| (D64126) unknown
[Bacillus subtilis] >gi|2632413|emb|CAB11922.1| (Z99104)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 276
Score = 159 bits (398), Expect = 4e-38
Identities = 93/259 (35%), Positives = 153/259 (58%), Gaps = 4/259 (1%)
Query: 20 SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSV 79
+L D+N ++K+G ++ +IG +GSGKST LNGL+ + G+ V + +
Sbjct: 9 ALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPT-KGQISLGSTVIQAGKKNKDL 67
Query: 80 AELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKR-E 138
+L +VG+VFQ P+ QLF TVL++++F N GV++E+ ++ R L+LV L ++ +
Sbjct: 68 KKLRKKVGIVFQFPEHQLFEETVLKDISFGPMNFGVKKEDAEQKAREMLQLVGLSEELLD 127
Query: 139 EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITII 198
P LSGG+ +R+AIA VL M P+VLVLDEPT+ LDP GR+E++ + L++ +T I
Sbjct: 128 RSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTI 187
Query: 199 LVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVKIGYELKKR 258
LV H+ + +AD ++V G + G P ++F E + G+ +P +K L+
Sbjct: 188 LVTHSMEDAAAYADEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAA 247
Query: 259 -GIT-RRAVLSYEEIIAEI 275
G+ +L+ E+ AEI
Sbjct: 248 LGVRFNEPMLTIEDAAAEI 266
>dbj|BAB03884.1| (AP001507) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 156 bits (391), Expect = 2e-37
Identities = 97/264 (36%), Positives = 152/264 (56%), Gaps = 4/264 (1%)
Query: 20 SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSV 79
+L DV+ + G F IIG +GSGKST NGL+ S G + + + + S+
Sbjct: 10 ALSDVSFTIPSGSFTAIIGHTGSGKSTLAQHFNGLLRPSKGTVRLGELEITA-DQKPPSL 68
Query: 80 AELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREE 139
E+ +VGLVFQ P+ QLF TV +++ F N GV +R + L LV L D +
Sbjct: 69 KEIRRKVGLVFQYPEHQLFEETVEKDICFGPMNYGVSEARAKKRAKELLHLVGLPDTYLQ 128
Query: 140 FPP-NLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITII 198
P +LSGG+ +R+AIA VL M+P VLVLDEPT+ LDP G+ ++ + L++E+++T +
Sbjct: 129 ASPFSLSGGQMRRVAIAGVLAMEPDVLVLDEPTAGLDPEGQRLIMDMFYRLHQEKELTTV 188
Query: 199 LVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVKIGYELKKR 258
LV HN + AD+I+V G V M G + VF + L +G+ +P +++ ++K+R
Sbjct: 189 LVTHNMSDAAKFADQIIVMSQGNVAMTGDRQTVFARADELVALGLDVPETLQLLLQVKER 248
Query: 259 -GI-TRRAVLSYEEIIAEIAKQLR 280
G+ + S EE+ +AK+L+
Sbjct: 249 FGLHDVPPLFSLEELADFLAKELQ 272
>gi|11466425 probable transport protein [Mesostigma viride]
>gi|7259568|gb|AAF43869.1|AF166114_81 (AF166114)
probable transport protein [Mesostigma viride]
Length = 348
Score = 156 bits (390), Expect = 3e-37
Identities = 89/231 (38%), Positives = 141/231 (60%), Gaps = 12/231 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I ++N+S K+GN +A L +NL +K G + ++GPSGSGKST + GL +
Sbjct: 3 ILIDNISKKFGNFQA--LNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGL-----DTPD 55
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
EG +++ G N +S+ S +G VFQN LF NMTV + +AF LE + ++ R
Sbjct: 56 EGTIWISGKNASGYSIQ--SRNIGFVFQN--YALFKNMTVYDNIAFGLELRRISFNDISR 111
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
++ L+LV+L + +P LSGG++QR+A+A L ++PKVL+LDEP LD R+ +
Sbjct: 112 KVNKLLELVQLQNLGHRYPAQLSGGQRQRIALARALAIEPKVLLLDEPFGALDARVRKNL 171
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+ +R L+ + IT I+V H+ +E AD IVVF+ GR+ GKP+++++
Sbjct: 172 RAWLRDLHNKFSITTIIVTHDQQEAMEIADEIVVFNSGRIEQIGKPQDIYD 222
>sp|Q50294|Y179_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG179 HOMOLOG
(GT9_ORF274) >gi|2127637|pir||S62815 sulfate transport
ATP-binding protein cysA - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|2146659|pir||S73964 sulfate transport
ATP-binding protein cysA - Mycoplasma pneumoniae (SGC3)
(ATCC 29342) >gi|1215695|gb|AAC43688.1| (U34795) peptide
transport system protein SapF homolog; SapF homolog
[Mycoplasma pneumoniae] >gi|1674343|gb|AAB96286.1|
(AE000061) cobalt transport ATP-binding protein
[Mycoplasma pneumoniae]
Length = 274
Score = 153 bits (382), Expect = 3e-36
Identities = 89/271 (32%), Positives = 155/271 (56%), Gaps = 13/271 (4%)
Query: 7 ENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGN 66
+ V F Y S+ +R+++ +V +GE++ I+G +GSGKST L GL+ G
Sbjct: 13 QGVYFSY--SELPLIRNLSFDVFEGEYVCIVGHNGSGKSTISKLLTGLLKPQA-----GT 65
Query: 67 VFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRW 126
+ + G +V L +G++FQNPD+Q +TV +++AF LEN RE+M I
Sbjct: 66 IKIFGKTISSENVTYLRNHIGIIFQNPDNQFIGITVEDDIAFGLENRRYTREKMKSIIED 125
Query: 127 ALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLV 186
+ + + ++ P NLSGG+KQR+AIASVL + P +++ DE TS LDP + + +
Sbjct: 126 VAQQAGITELLQKEPHNLSGGQKQRVAIASVLALNPAIIIFDESTSMLDPKAKRTIKQFM 185
Query: 187 RLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIP 246
L + K +I + H+ + + + AD+++V + GR++ +GKP++VF + L++I + IP
Sbjct: 186 VELRNQGK-CVISITHDMEEVTK-ADKVLVMNEGRLIRQGKPKDVFNSAAELQKIRLDIP 243
Query: 247 TRVKIGYELKKRGITRRAVLSYEEIIAEIAK 277
+ K G+T + + Y+++I I K
Sbjct: 244 --FSLSLSTKVNGVT--STIDYQQLIEAIGK 270
>pir||C64496 ABC transporter ATP-binding protein - Methanococcus jannaschii
>gi|1592193|gb|AAB99589.1| (U67597) cobalt transport
ATP-binding protein (cbiO) [Methanococcus jannaschii]
Length = 278
Score = 152 bits (381), Expect = 3e-36
Identities = 99/277 (35%), Positives = 166/277 (59%), Gaps = 9/277 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSING 61
I + +VS+KY N + +L +VNLN+ K E + I+GP+G+GK+T L+GL+ P
Sbjct: 4 IYRLVDVSYKYPNG-SIALDNVNLNIYKNEVVAILGPNGAGKTTLLKILDGLVFPDKGEV 62
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
FEG D + + + E +VG VFQNPD LFN TV +EVAF+ +L +E+
Sbjct: 63 YFEGKKLTDEILRDKELMKEFRRKVGFVFQNPDVMLFNPTVWDEVAFSPLHL-YSKEKAI 121
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
LK +K++ ++ P NLSGGEK++++I+ +L ++P+V+++DEPTS LDP R E
Sbjct: 122 EVTDKTLKDMKIYHLKDRHPYNLSGGEKKKVSISCILSVEPEVILMDEPTSALDPKSRAE 181
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERI 241
+++L++ KE T++LV H+ + L ADR V + +V+ EGK +++F L+ +
Sbjct: 182 IMNLIKSF-KECGKTVVLVTHDLN-LACLADRCYVLN-KKVIFEGKVKDLFS--LNLDEL 236
Query: 242 GIRIPTRVKIGYELKKRGITRRAV-LSYEEIIAEIAK 277
+ +P K+ +LK G + ++ +E + I+K
Sbjct: 237 NLDVPEISKLFIKLKNMGYNINEIPVTLDEAVNIISK 273
>sp|P47425|Y179_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG179
>gi|1361529|pir||H64219 hemolysin secretion ATP-binding
protein hlyB homolog - Mycoplasma genitalium
>gi|3844775|gb|AAC71398.1| (U39697) ABC transporter
ATP-binding protein [Mycoplasma genitalium]
Length = 274
Score = 151 bits (377), Expect = 1e-35
Identities = 93/274 (33%), Positives = 159/274 (57%), Gaps = 21/274 (7%)
Query: 8 NVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNV 67
NV+F Y +R+++ +V +GE++ I+G +GSGKST L GL+ G +
Sbjct: 13 NVAFSYNELPL--IRELSFSVYEGEYVCIVGHNGSGKSTISKLLTGLLKPQA-----GEI 65
Query: 68 FVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWA 127
+ G +V+ L +G++FQNPD+Q +TV +++AF LEN R+ +I+
Sbjct: 66 KIFGKTVDFDNVSYLRNNIGIIFQNPDNQFIGITVEDDIAFGLENKCFSRQ----KIKAI 121
Query: 128 LKLVKLWDKREEF----PPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
+ V L + + F P NLSGG+KQR+AIASVL + P +++ DE T+ LDP ++ +
Sbjct: 122 IDEVTLQTQTDGFIKQEPHNLSGGQKQRVAIASVLALNPAIIIFDESTAMLDPKAKKTIK 181
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGI 243
+ L K+ K +I + H+ + + + AD+++V + G+++ +GKP EVF + + L++I +
Sbjct: 182 QFMVKLAKQGK-CVISITHDMEEVTK-ADKVLVMNEGKLIKQGKPVEVFTSEQELQKIRL 239
Query: 244 RIPTRVKIGYELKKRGITRRAVLSYEEIIAEIAK 277
IP + K RGIT + + Y+ +I IAK
Sbjct: 240 DIP--FSLSLSTKIRGIT--STIDYQTLIKSIAK 269
>pir||E72224 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4982238|gb|AAD36730.1|AE001808_5 (AE001808)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 259
Score = 149 bits (373), Expect = 3e-35
Identities = 101/251 (40%), Positives = 140/251 (55%), Gaps = 23/251 (9%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I + +VSF+Y Y L+DVN + G+ ++G +GSGK+T L GL+ E
Sbjct: 3 ITLNSVSFRYNGD--YVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLL------EA 54
Query: 64 EGNVFVDGLNTREHSVAE---LSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
EG +F+DG S A+ L VG VFQNP SQ+ TV E+VAF+LE +G++ EM
Sbjct: 55 EGEIFLDG------SPADPFLLRKNVGYVFQNPSSQIIGATVEEDVAFSLEIMGLDESEM 108
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+RI+ L+LV L +E P NLSGG+KQRLAIAS+L + L LDEP S LDP +
Sbjct: 109 RKRIKKVLELVGLSGLEKEDPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQR 168
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
E+ ++ L E K IILV H ++ L+ D I+ G + G EE E E
Sbjct: 169 EIFQVLESLKNEGK-GIILVTHELEY-LDDMDFILHISNGTIDFCGSWEEFVER----EF 222
Query: 241 IGIRIPTRVKI 251
+ IP + K+
Sbjct: 223 DDVEIPFKWKL 233
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 148 bits (371), Expect = 5e-35
Identities = 94/232 (40%), Positives = 137/232 (58%), Gaps = 16/232 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I++EN+ K+GN A L ++NL +K GEF+ ++GPSGSGKST T+ G+ +
Sbjct: 4 IKLENIVKKFGNFTA--LNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPT----- 56
Query: 64 EGNVFVDGLNTREHSVAELSTR---VGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G ++ D E V EL + VGLVFQN + +MTV + +AF LE REE+
Sbjct: 57 SGKIYFD-----EKDVTELPPKDRNVGLVFQNW-ALYPHMTVYKNIAFPLELRKAPREEI 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+++R K++ + +P LSGG++QR+AIA LV +P+VL+LDEP S LD L R
Sbjct: 111 DKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRL 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
EV + ++ L KE IT + V H+ L ADRI V G ++ G P+EV+
Sbjct: 171 EVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVY 222
>emb|CAB59657.1| (AL132674) putative ABC transport protein, ATP-binding subunit.
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 148 bits (370), Expect = 7e-35
Identities = 83/243 (34%), Positives = 144/243 (59%), Gaps = 10/243 (4%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
++V ++F Y + +L V+ V +GE + ++GP+G+GK+T L LNG++
Sbjct: 16 LDVSGLAFAYPDGHQ-ALFGVDFCVARGERVALLGPNGAGKTTLVLHLNGILTGGT---- 70
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G V V GL + ++AE+ RVG+VFQ+PD QLF TV E+VAF GV+ E+
Sbjct: 71 -GTVTVAGLPVDKRNMAEIRRRVGIVFQDPDDQLFMPTVREDVAFGPAAAGVKGAELEAC 129
Query: 124 IRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
+ AL LV + + ++ P +LS G+++R+A+A+VL M+P++LVLDEP+S LDP R E+
Sbjct: 130 VDRALTLVGMAEFKDRPPHHLSFGQRRRVAVATVLAMEPEILVLDEPSSNLDPASRRELA 189
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGI 243
++R L+ +T+++V H+ + LE R ++ G + +G + + + + +
Sbjct: 190 DILRSLD----VTVLMVTHDLPYALELCPRALILSDGAIAADGPTAALLSDDDLMRAHRL 245
Query: 244 RIP 246
+P
Sbjct: 246 ELP 248
>gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, ATP-binding subunit
[Methanococcus maripaludis]
Length = 243
Score = 148 bits (369), Expect = 9e-35
Identities = 91/236 (38%), Positives = 143/236 (60%), Gaps = 14/236 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE+ N+ K+ +A+ L+ V+L V KGE L I+GPSGSGKST +NGL +
Sbjct: 1 MIEMVNIHKKF--KEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTT---- 54
Query: 63 FEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALEN-LGVERE 118
EG++F +G + ++ ++ ++ ++G+VFQ LF ++TVL+ + FA L V ++
Sbjct: 55 -EGHIFFEGDDITDKKVNINKIRQKIGMVFQQ--FNLFPHLTVLDNITFAPRKVLNVSKK 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E R LK V L K ++P LSGG++QR+AIA L MKP ++ DEPTS LDP
Sbjct: 112 EAEELARELLKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPEL 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL +++ L E +T+++V H F E DR++ D G+++ +G P +VF N
Sbjct: 172 VKEVLDVMKQL-AYEGMTMVVVTHEMGFAKEVGDRLIFIDDGQILEDGNPSDVFSN 226
>pir||C75369 amino acid ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459415|gb|AAF11206.1|AE002008_1 (AE002008) amino
acid ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 265
Score = 147 bits (368), Expect = 1e-34
Identities = 95/235 (40%), Positives = 143/235 (60%), Gaps = 13/235 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
II +NV +G A LR VNL V++GE + IIGPSGSGKSTF T+N L PH
Sbjct: 25 IIVAQNVQKHFGTFHA--LRGVNLTVRQGEVVVIIGPSGSGKSTFIRTINALDPHD---- 78
Query: 63 FEGNVFVDGLNTR-EHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENL-GVEREE 119
G++ VDGL + ++ + VG+VFQ+ LF ++TVL+ + A + GV++ +
Sbjct: 79 -GGSITVDGLPLQGARNLDAIRREVGMVFQS--FNLFPHLTVLDNITLAPTRVRGVDKAQ 135
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
R L+ V + ++ +FP LSGG++QR+AIA L M+PK+++ DEPTS LDP
Sbjct: 136 AQARGLDLLRRVGIEEQAYKFPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMI 195
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL +++ L + +T+++V H F E ADRI+ FD G +V + PE ++N
Sbjct: 196 KEVLDVMKELAR-TGMTMLVVTHEMGFAREVADRILFFDQGNIVEDTTPEAFYQN 249
>pir||B75082 phosphate abc transporter, ATP-binding protein (pstb) PAB0700 -
Pyrococcus abyssi (strain Orsay)
>gi|5458471|emb|CAB49959.1| (AJ248286) phosphate ABC
transporter, ATP-binding protein (pstB) [Pyrococcus
abyssi]
Length = 280
Score = 147 bits (367), Expect = 2e-34
Identities = 86/240 (35%), Positives = 138/240 (56%), Gaps = 12/240 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
IE N+ YG+++ ++ +NL + K ++GPSG GKST N L+ + +
Sbjct: 33 IETRNLRIYYGSNEV--IKGINLKIPKNVVFALMGPSGCGKSTLLRAFNRLLDLNPEAKV 90
Query: 64 EGNVFVDGLNTREHSVAELSTR--VGLVFQNPDSQLFNMTVLEEVAFALENLGVER-EEM 120
EG V + G+N V + R VG+VFQ P+ ++T+ E VA ++ G+ + +E+
Sbjct: 91 EGEVRISGVNIYSPDVDPIRVRREVGMVFQYPNP-FPHLTIYENVAIGVKLNGLAKGKEL 149
Query: 121 WRRIRWALKLVKLWD----KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
++WALK LWD + +++P NLSGG+KQRL IA VL MKPK++++DEPT+ +DP
Sbjct: 150 DEIVKWALKKATLWDEVKNRLKDYPANLSGGQKQRLVIARVLAMKPKIILMDEPTANIDP 209
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
+G ++ L+ L K+ TI+LV H+ +D + G++V G +VFEN E
Sbjct: 210 VGTRKIEELLFELKKD--YTIVLVTHSPAQAARVSDYVAFIYMGKIVEVGPTRKVFENPE 267
>sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64082 ATP-binding protein
homolog HI0621 - Haemophilus influenzae (strain Rd
KW20) >gi|1573615|gb|AAC22280.1| (U32744) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 345
Score = 146 bits (366), Expect = 2e-34
Identities = 89/237 (37%), Positives = 140/237 (58%), Gaps = 11/237 (4%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+I++ N+ F+ K +L +V+LN++KG+ G+IG SG+GKST +N L +
Sbjct: 1 MIKLNNIXKIFELPXKKLTALDNVSLNIEKGQICGVIGASGAGKSTLIRCVNLLEKPT-- 58
Query: 61 GEFEGNVFVDGLNTREHSVAEL---STRVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
G+V VDG+ + S EL ++G++FQ+ + L + TV E VA LE +
Sbjct: 59 ---SGSVIVDGVELTKLSDRELVLARRQIGMIFQH-FNLLSSRTVFENVALPLELESESK 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
++ +I L LV L +KR+ +P NLSGG+KQR+AIA L PKVL+ DE TS LDP
Sbjct: 115 AKIQEKITALLDLVGLSEKRDAYPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDPA 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ +L L++ +N+ ITI+L+ H + + + D++ V D GR+V +G E+F N
Sbjct: 175 TTQSILKLLKEINRTLGITILLITHEMEVVKQICDQVAVIDQGRLVEQGTVGEIFAN 231
>gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein GLNQ [Salmonella
typhimurium]
Length = 240
Score = 146 bits (365), Expect = 3e-34
Identities = 96/249 (38%), Positives = 147/249 (58%), Gaps = 20/249 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE +NVS +G ++ L +++LN+++GE + IIGPSGSGKST +N L +
Sbjct: 1 MIEFKNVSKHFGPTQV--LHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEIT---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTR--VGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVERE 118
G++ VDGL + V E R G+VFQ LF ++T LE V F L GV++E
Sbjct: 55 -SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQ--FYLFPHLTALENVMFGPLRVRGVKKE 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E ++ + L V L ++ +P LSGG++QR+AIA L +KPK+++ DEPTS LDP
Sbjct: 112 EAEKQAKALLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPEL 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN---- 234
R EVL +++ L EE +T+++V H F + A R++ D GR+ +G P+ + EN
Sbjct: 172 RHEVLKVMQDL-AEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGSPQALIENPPSP 230
Query: 235 --VEFLERI 241
EFL+ +
Sbjct: 231 RLQEFLQHV 239
>pir||T03543 probable cobalt transport system ATP-binding protein cbiO -
Rhodobacter capsulatus >gi|3128344|gb|AAC16196.1|
(AF010496) cobalt transport ATP-binding protein CbiO
[Rhodobacter capsulatus]
Length = 280
Score = 145 bits (363), Expect = 4e-34
Identities = 98/249 (39%), Positives = 145/249 (57%), Gaps = 15/249 (6%)
Query: 3 IIEVENVSFKY-GNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSIN 60
I+ E +++ + G KA L D++L V +GE L I+GP+G+GKST L LNG + P S
Sbjct: 4 ILAAEALTYAFPGGVKA--LDDLSLAVPQGESLAILGPNGAGKSTLLLHLNGTLRPQS-- 59
Query: 61 GEFEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
G V + G T HS +L+ RVGLV Q+ D QLF TV E+V+F NLG+
Sbjct: 60 ----GRVLLGGTATG-HSRKDLTDWRRRVGLVLQDADDQLFAATVFEDVSFGPLNLGLSE 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
E R+ AL + + D R+ LSGG+K+R+AIA + M+P+VL+LDEPT+ LD
Sbjct: 115 AEARARVEEALAALSISDLRDRPTHMLSGGQKRRVAIAGAVAMRPEVLLLDEPTAGLDLA 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEF 237
G E++L+L+ L + +T++ H+ + ADR+ +F GRV+ EG V +
Sbjct: 175 GTEQLLTLLHGL-RAAGMTLVFSTHDVELAAALADRVALFRTGRVLAEGAAAAVLSDRAT 233
Query: 238 LERIGIRIP 246
L + G+R P
Sbjct: 234 LAQGGLRPP 242
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 145 bits (363), Expect = 4e-34
Identities = 92/232 (39%), Positives = 137/232 (58%), Gaps = 16/232 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I +EN+ K+GN A L ++NL +K GEF+ ++GPSGSGKST T+ G+ +
Sbjct: 4 IRLENIVKKFGNFIA--LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT----- 56
Query: 64 EGNVFVDGLNTREHSVAELSTR---VGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G ++ D E V EL + +GLVFQN + +MTV + +AF LE ++E+
Sbjct: 57 SGRIYFD-----ERDVTELPPKDRNIGLVFQNW-ALYPHMTVYKNIAFPLELRKAPKDEI 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
++R K++ + + +P LSGG++QR+AIA LV +P+VL+LDEP S LD L R
Sbjct: 111 DEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRL 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
EV + ++ L KE IT I V H+ L ADRI V G+++ G P+EV+
Sbjct: 171 EVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
>sp|Q58418|PSTB_METJA PROBABLE PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB
>gi|2119775|pir||C64426 phosphate transport system
ATP-binding protein - Methanococcus jannaschii
>gi|1591672|gb|AAB99016.1| (U67544) phosphate specific
transport complex component (pstB) [Methanococcus
jannaschii]
Length = 252
Score = 145 bits (362), Expect = 6e-34
Identities = 95/241 (39%), Positives = 144/241 (59%), Gaps = 19/241 (7%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTF--CLT-LNGLIPHSIN 60
+E +N++ YG +A L D+NL + + + +IGPSG GKSTF CL LN LIP N
Sbjct: 6 METKNLNLWYGEKQA--LFDINLPIYENKITALIGPSGCGKSTFLRCLNRLNDLIP---N 60
Query: 61 GEFEGNVFVDGLN--TREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGV-ER 117
EG V +DG N ++ V EL RVG+VFQ P+ F M++ + VAF G+ ++
Sbjct: 61 VRIEGEVLLDGKNIYDKDVDVYELRKRVGMVFQKPNP--FAMSIYDNVAFGPRIHGIKDK 118
Query: 118 EEMWRRIRWALKLVKLWDK-REEFPPN---LSGGEKQRLAIASVLVMKPKVLVLDEPTSQ 173
+E+ + + WALK LWD+ ++E N LSGG++QRL IA + +KP+VL++DEPTS
Sbjct: 119 KELDKIVEWALKKAALWDEVKDELHKNALSLSGGQQQRLCIARAIAVKPEVLLMDEPTSA 178
Query: 174 LDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
LDP+ ++ L+ L K+ TI++V HN +D F G+++ G+ E++F
Sbjct: 179 LDPISTLKIEELMVELAKD--YTIVVVTHNMQQASRVSDYTAFFLMGKLIEFGETEQIFL 236
Query: 234 N 234
N
Sbjct: 237 N 237
>pir||C82266 ABC transporter, ATP-binding protein VC0907 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655363|gb|AAF94069.1| (AE004174) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 344
Score = 145 bits (362), Expect = 6e-34
Identities = 84/235 (35%), Positives = 137/235 (57%), Gaps = 11/235 (4%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+IE+++V+ F G+ + ++L+D+NL + +G G+IG SG+GKST +N L +
Sbjct: 1 MIEIKSVNKVFYQGDKQIHALKDINLFIPQGTIFGVIGSSGAGKSTLIRCVNMLEKPT-- 58
Query: 61 GEFEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
G V VDG++ S +L +G++FQ+ + L + TV E VA LE G +
Sbjct: 59 ---SGQVIVDGVDLTTLSNPQLCAARRNIGMIFQH-FNLLSSRTVFENVALPLELAGQSQ 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+ + ++ L LV L +KRE +P NLSGG+KQR+AIA L PKVL+ DE TS LDP
Sbjct: 115 QHIETKVTELLALVGLSEKRESYPANLSGGQKQRVAIARALASDPKVLLCDEATSALDPA 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ +L L++ +N++ +TI+L+ H D + + + GG +V +G ++F
Sbjct: 175 TTQSILELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGTVGDIF 229
>pir||G83351 probable ATP-binding component of ABC transporter PA2350 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948387|gb|AAG05738.1|AE004661_5 (AE004661) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 369
Score = 145 bits (361), Expect = 8e-34
Identities = 85/220 (38%), Positives = 132/220 (59%), Gaps = 17/220 (7%)
Query: 20 SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHS- 78
+LR+++L +++GE GIIG SG+GKS+ TLN L S EG V +D + +
Sbjct: 44 ALREIDLEIRRGEVFGIIGRSGAGKSSLIRTLNRLERPS-----EGQVLIDDEDIGGYDG 98
Query: 79 --VAELSTRVGLVFQNPDSQLFNM----TVLEEVAFALENLGVEREEMWRRIRWALKLVK 132
+ L R+G++FQ+ FN+ TV + +A L GV R + R+ L+LV
Sbjct: 99 QRLVALRRRIGMIFQH-----FNLMSAKTVRQNIALPLRVAGVPRARIEERVAGLLQLVG 153
Query: 133 LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKE 192
L +KR+ +P LSGG+KQR+ IA LV +P++L+ DE TS LDP + +L+L+R +N+
Sbjct: 154 LEEKRDAYPAQLSGGQKQRVGIARALVHQPQILLCDEATSALDPESTQAILALLRDINRR 213
Query: 193 EKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+TI+L+ H + E DR+VV + GR+V +G+ EVF
Sbjct: 214 LGLTIVLITHEMAVIREICDRVVVLECGRIVEQGEVWEVF 253
>sp|P55662|Y4TH_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN Y4TH
>gi|2182638|gb|AAB91861.1| (AE000098) Y4tH [Rhizobium
sp. NGR234]
Length = 257
Score = 144 bits (360), Expect = 1e-33
Identities = 94/245 (38%), Positives = 139/245 (56%), Gaps = 23/245 (9%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+II + V YGN + +++ V++GE + IIGPSGSGKST L ++ G
Sbjct: 4 SIIVFDKVKKAYGNFTV--INELDFEVRRGEKVSIIGPSGSGKSTVLRILM-----TLEG 56
Query: 62 EFEGNVFVDG------------LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAF 108
+G V+V G + E + ++ T++G+VFQ LF +MTVL +
Sbjct: 57 INDGAVYVGGEPLWHELKNGSMMPATEKHLRKMRTQLGMVFQQ--FNLFPHMTVLRNLTE 114
Query: 109 ALEN-LGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVL 167
A LG+ +EE RR L+LV L D +FP LSGG++QR+ IA L M+PK+++
Sbjct: 115 APRVVLGLSKEEARRRAEELLELVGLVDHAHKFPAQLSGGQQQRVGIARALAMRPKIMLF 174
Query: 168 DEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGK 227
DEPTS LDP EVL+++R L E +T+++V H F E +DR+ FD GR+ EG
Sbjct: 175 DEPTSALDPELVGEVLNVIRRLAAEHDLTMLMVTHEMRFAREISDRVCFFDKGRIREEGT 234
Query: 228 PEEVF 232
PE++F
Sbjct: 235 PEQLF 239
>sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|98203|pir||A42478
glutamine transport protein glnQ - Bacillus
stearothermophilus >gi|142988|gb|AAA22483.1| (M61017)
membrane transport protein [Bacillus stearothermophilus]
Length = 242
Score = 143 bits (357), Expect = 2e-33
Identities = 98/252 (38%), Positives = 142/252 (55%), Gaps = 26/252 (10%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I V+ YG+ + L+D+NL + +GE + IIGPSGSGKST +N L S
Sbjct: 1 MIYFHQVNKYYGDF--HVLKDINLTIHQGEVVVIIGPSGSGKSTLVRCINRLETIS---- 54
Query: 63 FEGNVFVDGL--NTREHSVAELSTRVGLVFQNPDSQLFN----MTVLEEVAFA-LENLGV 115
G + VD + N + + +L +G+VFQ+ FN MTVL+ + A ++ L +
Sbjct: 55 -SGELIVDNVKVNDKHIDINQLRRNIGMVFQH-----FNLYPHMTVLQNITLAPMKVLRI 108
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+E + L+ V + DK +P LSGG++QR+AIA L MKPK+++ DEPTS LD
Sbjct: 109 PEKEAKETAMYYLEKVGIPDKANAYPSELSGGQQQRVAIARGLAMKPKIMLFDEPTSALD 168
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV 235
P EVL +++ L K E +T+++V H F E ADRIV D GR++ E PEE F N
Sbjct: 169 PETIGEVLDVMKQLAK-EGMTMVVVTHEMGFAREVADRIVFMDQGRILEEAPPEEFFSNP 227
Query: 236 E------FLERI 241
+ FL RI
Sbjct: 228 KEERAKVFLSRI 239
>pir||F82922 phosphate transport ATP-binding protein B UU200 [imported] -
Ureaplasma urealyticum
>gi|6899165|gb|AAF30607.1|AE002119_12 (AE002119)
phosphate transport ATP-binding protein B [Ureaplasma
urealyticum]
Length = 329
Score = 142 bits (355), Expect = 4e-33
Identities = 84/238 (35%), Positives = 135/238 (56%), Gaps = 11/238 (4%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N+ E+ N +F Y N + L D+NL++K+ + IGPSG GKSTF LN L
Sbjct: 79 NVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGT 138
Query: 62 EFEGNVFVDGLNTREHSVA--ELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGV-ERE 118
EG ++ G NTR ++ EL TR+G+VFQ P F M++ + VA+ N G+ +R+
Sbjct: 139 SHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP--FEMSIFDNVAYGPRNNGINDRK 196
Query: 119 EMWRRIRWALKLVKLWDK----REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
+ + + +LK LWD+ ++ LSGG++QRL IA + ++P+VL++DEPTS L
Sbjct: 197 ILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSAL 256
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
DP+ ++ L+ L ++K +II+V H+ +D V F G + G+ + +F
Sbjct: 257 DPIATAKIEELI--LELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIF 312
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 142 bits (355), Expect = 4e-33
Identities = 86/238 (36%), Positives = 143/238 (59%), Gaps = 12/238 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++++E++ +G K Y LR ++L VKKGE + IIGPSGSGKST +N L +
Sbjct: 1 MTVLKIEDLHKYFG--KLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQ-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVERE 118
G ++ G ++ + + +G+VFQ LF +++VL + A ++ ++++
Sbjct: 57 ---RGKIYFKGELITHRNINRIRSSIGMVFQQ--FNLFPHLSVLNNLTLAPMKVKNMQKD 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E + + L+ V L +K E P NLSGG++QR+AIA L+M P++++ DEPTS LDP
Sbjct: 112 EAVEKAKKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPEL 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
+EVL +++ L + +T+++V H F + +DR+V D GR+V G PE++F N E
Sbjct: 172 VKEVLDVIKDL-AQSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKIFSNPE 228
>pir||G69633 glutamine transport protein glnQ - Bacillus subtilis
>gi|2635188|emb|CAB14684.1| (Z99117) glutamine ABC
transporter (ATP-binding protein) [Bacillus subtilis]
>gi|2635206|emb|CAB14701.1| (Z99118) glutamine ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 242
Score = 142 bits (355), Expect = 4e-33
Identities = 98/249 (39%), Positives = 149/249 (59%), Gaps = 20/249 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I +NV+ YG+ + L+ +NL ++KGE + IIGPSGSGKST +N L SIN
Sbjct: 1 MITFQNVNKHYGDF--HVLKQINLQIEKGEVVVIIGPSGSGKSTLLRCINRL--ESIN-- 54
Query: 63 FEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVERE 118
EG + V+G +N R+ + ++ +G+VFQ+ L+ + TVL+ + A ++ L E
Sbjct: 55 -EGVLTVNGTAINDRKTDINQVRQNIGMVFQH--FHLYPHKTVLQNIMLAPVKVLRQSPE 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
+ R+ L+ V + DK + +P LSGG++QR+AIA L MKP+V++ DEPTS LDP
Sbjct: 112 QAKETARYYLEKVGIPDKADAYPSQLSGGQQQRVAIARGLAMKPEVMLFDEPTSALDPEM 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE-- 236
EVL +++ L K E +T+++V H F E ADRIV D G+++ E P E + N +
Sbjct: 172 IGEVLDVMKTLAK-EGMTMVVVTHEMGFAKEVADRIVFIDEGKILEEAVPAEFYANPKEE 230
Query: 237 ----FLERI 241
FL RI
Sbjct: 231 RARLFLSRI 239
>gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dppD-3) [Sulfolobus
solfataricus]
Length = 324
Score = 141 bits (353), Expect = 7e-33
Identities = 89/250 (35%), Positives = 143/250 (56%), Gaps = 18/250 (7%)
Query: 1 MNIIEVENVSFKYGN--SKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M ++++ N++ Y S L DVNL+V+KGE +G++G SGSGKST ++ ++P
Sbjct: 4 MVVLQIRNLNVYYNTLISWVKVLSDVNLDVEKGEIVGVVGESGSGKSTLGHAISRILPP- 62
Query: 59 INGEFEGNVFVDGLNTREHSVAELS----TRVGLVFQNPDSQL-----FNMTVLEEVAFA 109
N +G++ VDG+N + +EL T V ++FQNP + L +LE V
Sbjct: 63 -NARIQGDIIVDGVNLAKLKDSELQKYRGTWVFMIFQNPLNSLNPVKKVGSQLLEAVKIR 121
Query: 110 LENLG--VEREEMWRRIRWALKLVKLWDKR---EEFPPNLSGGEKQRLAIASVLVMKPKV 164
+ G E E + R + LK ++L D + +P LSGG+ QR+ I+ L++KPK+
Sbjct: 122 YQREGKKAEEESLMRDVIEVLKDLRLPDPYSIIDRYPHQLSGGQVQRIVISMALLLKPKL 181
Query: 165 LVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVM 224
L+ DEPTS LD + +V++L + LNKE +I+ + H+ +DRIVV GR++
Sbjct: 182 LIADEPTSALDVTIQAQVVNLFKQLNKEINTSILFITHDISLAYVVSDRIVVMYAGRIME 241
Query: 225 EGKPEEVFEN 234
+GK EEV ++
Sbjct: 242 DGKVEEVLKS 251
>sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|72464|pir||QRECGQ
glutamine transport protein glnQ - Escherichia coli
>gi|581098|emb|CAA32384.1| (X14180) GlnQ (AA 1-240); gtg
start [Escherichia coli] >gi|1651363|dbj|BAA35481.1|
(D90718) Glutamine transport protein GlnQ. [Escherichia
coli] >gi|1651369|dbj|BAA35491.1| (D90719) Glutamine
transport protein GlnQ. [Escherichia coli]
>gi|1787029|gb|AAC73896.1| (AE000183) ATP-binding
component of glutamine high-affinity transport system
[Escherichia coli K12]
Length = 240
Score = 141 bits (352), Expect = 9e-33
Identities = 95/249 (38%), Positives = 143/249 (57%), Gaps = 20/249 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE +NVS +G ++ L +++LN+ +GE + IIGPSGSGKST +N L +
Sbjct: 1 MIEFKNVSKHFGPTQV--LHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEIT---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTR--VGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVERE 118
G++ VDGL + V E R G+VFQ LF ++T LE V F L G +E
Sbjct: 55 -SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQ--FYLFPHLTALENVMFGPLRVRGANKE 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E + R L V L ++ +P LSGG++QR+AIA L +KPK+++ DEPTS LDP
Sbjct: 112 EAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPEL 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN---- 234
R EVL +++ L EE +T+++V H F + A R++ D GR+ +G P+ + +N
Sbjct: 172 RHEVLKVMQDL-AEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQVLIKNPPSQ 230
Query: 235 --VEFLERI 241
EFL+ +
Sbjct: 231 RLQEFLQHV 239
>sp|P75186|PSTB_MYCPN PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB HOMOLOG
>gi|2146494|pir||S73559 phosphate transport ATP-binding
protein pstB - Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673900|gb|AAB95881.1| (AE000023) phosphate specific
[Mycoplasma pneumoniae]
Length = 329
Score = 141 bits (351), Expect = 1e-32
Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 12/238 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N+ E+EN++F Y K L D+NL +K+ + +IG SG GKSTF LN L + N
Sbjct: 81 NVFEIENLNFWYNKDKQV-LFDINLKIKRNKITALIGKSGCGKSTFIRCLNKLNDLNENV 139
Query: 62 EFEGNVFVDGLNTREHSVAELS--TRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
+ G +F G N + +L+ TRVG+VFQ FN ++ E +A+ L G+ ++
Sbjct: 140 RWNGKIFFLGKNINSGIINDLTLRTRVGMVFQQLTP--FNFSIFENIAYGLRAHGIHNKQ 197
Query: 120 MWRRI-RWALKLVKLWDK-REEFPPN---LSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
I ALK LWD+ ++ N LSGG++QRL IA + ++P VL++DEPTS L
Sbjct: 198 AIHEIVEQALKSTALWDEVKDNLHRNANTLSGGQQQRLCIARAIALQPDVLLMDEPTSAL 257
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
D + + L++ L +EK TII+V H+ + D + F GRVV +G +++F
Sbjct: 258 DSIATNSIELLIQQL--KEKYTIIIVTHSMAQTIRITDETIFFANGRVVEQGTTKQIF 313
>gi|9507702 hypothetical protein [Plasmid pNZ4000] >gi|5123518|gb|AAD40357.1|
(AF036485) hypothetical protein [Plasmid pNZ4000]
Length = 278
Score = 141 bits (351), Expect = 1e-32
Identities = 83/234 (35%), Positives = 134/234 (56%), Gaps = 6/234 (2%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I +EN++ +Y ++ LR +N V G+ +GIIG S SGKST C L G+IP ++ E
Sbjct: 7 IVIENLTTRYPGTEQPQLRQINAEVHTGQVVGIIGNSHSGKSTLCRVLAGVIPKIVSAEI 66
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNM--TVLEEVAFALENLGVEREEMW 121
EG + G ++ + G+V QNP QL + TV +E+AF L N G+ +
Sbjct: 67 EGYWHMFGQRVSDNWPV-YNAMNGVVLQNPAGQLSGLADTVADEIAFDLINQGMAEGLIQ 125
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
+R+ + L ++ P +LSGG+ QRLAIA+ + P +L++D+PTS++DPLGR +
Sbjct: 126 KRVEEVATQMGLIEQLNLRPESLSGGQIQRLAIATAIAANPAILIMDDPTSEMDPLGRRQ 185
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV 235
+ L + ++ T+ +V D L E AD + V G++V +G+P EVF ++
Sbjct: 186 ---FFQWLAQVKETTVFIVTSEIDDLCEVADVVWVLHKGQMVAQGRPGEVFNHL 236
>sp|P30750|ABC_ECOLI ATP-BINDING PROTEIN ABC >gi|7445928|pir||G64744 probable ABC-type
transport protein abc - Escherichia coli
>gi|1552775|gb|AAB08627.1| (U70214) ATP-binding protein
[Escherichia coli] >gi|1786398|gb|AAC73310.1| (AE000129)
ATP-binding component of a transporter [Escherichia coli
K12]
Length = 343
Score = 139 bits (348), Expect = 3e-32
Identities = 86/237 (36%), Positives = 132/237 (55%), Gaps = 11/237 (4%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+I++ N++ F G +L +V+L+V G+ G+IG SG+GKST +N L
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLL-----E 55
Query: 61 GEFEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
EG+V VDG S +EL+ ++G++FQ+ + L + TV VA LE +
Sbjct: 56 RPTEGSVLVDGQELTTLSESELTKARRQIGMIFQH-FNLLSSRTVFGNVALPLELDNTPK 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+E+ RR+ L LV L DK + +P NLSGG+KQR+AIA L PKVL+ DE TS LDP
Sbjct: 115 DEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+L L++ +N+ +TI+L+ H D + D + V G ++ + EVF +
Sbjct: 175 TTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSH 231
>dbj|BAB06693.1| (AP001517) alkylphosphonate ABC tranporter (ATP-binding protein)
[Bacillus halodurans]
Length = 258
Score = 139 bits (348), Expect = 3e-32
Identities = 90/254 (35%), Positives = 146/254 (57%), Gaps = 19/254 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE +NVS Y N L+DVNL + +GEF+ I+G SG+GKST ++N L+ +
Sbjct: 1 MIEFKNVSLVYPNG-TQGLKDVNLKINEGEFVVIVGLSGAGKSTLIRSMNRLVTPT---- 55
Query: 63 FEGNVFVDGLNTREHS---VAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGV---- 115
EG + +DG N +S + +L T+VG++FQN + + + ++ L ++G
Sbjct: 56 -EGELLIDGENILPYSSRQLRKLRTKVGMIFQNYNLVKRSSVMKNVISGRLGHVGTFASL 114
Query: 116 ----EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPT 171
+E++ R +L+ V + +K + LSGG++QR+AIA VL +PK+++ DEP
Sbjct: 115 LNLYPKEDVALAYR-SLQRVNIAEKVYQRADQLSGGQQQRVAIARVLTQQPKIILADEPV 173
Query: 172 SQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+ LDP +V++ +R +NKE+KIT I+ H D +E+ADRI+ G VV +G +V
Sbjct: 174 ASLDPPTSHQVMTYLRKINKEDKITTIVNLHFIDMAMEYADRIIGMRAGEVVFDGPASDV 233
Query: 232 FENVEFLERIGIRI 245
E F E G +I
Sbjct: 234 SEET-FEEIYGRKI 246
>dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia coli]
Length = 343
Score = 139 bits (348), Expect = 3e-32
Identities = 86/237 (36%), Positives = 132/237 (55%), Gaps = 11/237 (4%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+I++ N++ F G +L +V+L+V G+ G+IG SG+GKST +N L
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLL-----E 55
Query: 61 GEFEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
EG+V VDG S +EL+ ++G++FQ+ + L + TV VA LE +
Sbjct: 56 RPTEGSVLVDGQELTTLSESELTKARRQIGMIFQH-FNLLSSRTVFGNVALRLELDNTPK 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+E+ RR+ L LV L DK + +P NLSGG+KQR+AIA L PKVL+ DE TS LDP
Sbjct: 115 DEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+L L++ +N+ +TI+L+ H D + D + V G ++ + EVF +
Sbjct: 175 TTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSH 231
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 139 bits (347), Expect = 3e-32
Identities = 80/232 (34%), Positives = 135/232 (57%), Gaps = 5/232 (2%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSINGE 62
I V+NVS + K +L +VN+N++ GE GI+GPSG+GK+TF + GL +P +
Sbjct: 4 IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELY 63
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
F+ + + + V ++G+VFQ + N+T E +AF L N+ + +EE+ +
Sbjct: 64 FDDRLVA---SNGKLIVPPEDRKIGMVFQTW-ALYPNLTAFENIAFPLTNMKMSKEEIRK 119
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ K++ + FP LSGG++QR+A+A LV P +L+LDEP S LD R+
Sbjct: 120 RVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA 179
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+LV+ + +T+++V H+ + ADR+ V G++V GKPE++++N
Sbjct: 180 RALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDN 231
>sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|72468|pir||GRYCS7
sulfate transport protein - Synechococcus sp. (strain
PCC 7942) >gi|142152|gb|AAA22056.1| (J04512) sulfate
permease (gtg start codon) [Synechococcus PCC6301]
Length = 344
Score = 139 bits (347), Expect = 3e-32
Identities = 84/232 (36%), Positives = 140/232 (60%), Gaps = 12/232 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I+V VS ++G+ +A ++DV+L V+ G + ++GPSGSGKST + GL
Sbjct: 9 IQVSQVSKQFGSFQA--VKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPD----- 61
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
G +F+ G + SV + ++G VFQ+ LF ++TV + +AF LE +E++
Sbjct: 62 SGRIFLTGRDATNESVRD--RQIGFVFQH--YALFKHLTVRKNIAFGLELRKHTKEKVRA 117
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ L+LV+L + +P LSGG++QR+A+A L ++P+VL+LDEP LD R+++
Sbjct: 118 RVEELLELVQLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDL 177
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
S +R L+ E +T + V H+ + +E AD+IVV + G+V G P E+++N
Sbjct: 178 RSWLRKLHDEVHVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEIYDN 229
>gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Streptococcus pneumoniae]
Length = 242
Score = 139 bits (347), Expect = 3e-32
Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 12/234 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE +NV+ +Y LRDVNL ++ GEF+ ++GPSGSGK+T +N L+ +
Sbjct: 1 MIEYKNVALRYTEKDV--LRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPT---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMW 121
+GN+++DG +++ EL G V Q LF N+TV E +A E G +EE+
Sbjct: 55 -DGNIYMDGKRIKDYDERELRLSTGYVLQA--IALFPNLTVAENIALIPEMKGWSKEEIT 111
Query: 122 RRIRWALKLVKL--WDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
++ L V L + P LSGGE+QR+ I ++ +PK+ ++DEP S LD + R
Sbjct: 112 KKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISR 171
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+++ L + L+KE +T I V H+TD L+ ADRI V G + PE + +
Sbjct: 172 KQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILK 225
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 139 bits (346), Expect = 4e-32
Identities = 84/237 (35%), Positives = 137/237 (57%), Gaps = 11/237 (4%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+I +++VS +K + ++++V+L++KKGE GIIG SG+GKS+ LNGL +
Sbjct: 1 MINLQDVSKVYKSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEKPT-- 58
Query: 61 GEFEGNVFVDGLNTRE---HSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
G V V G E + + + ++FQ+ + L++ TV + + F LE GV++
Sbjct: 59 ---SGTVEVAGTKINEVNGRGLRKARHEISMIFQH-FNLLWSRTVRDNIMFPLEIAGVKK 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
E +R +KLV L K + +P LSGG+KQR+ IA L PKVL+ DE TS LDP
Sbjct: 115 SERIKRANELIKLVGLEGKEKSYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPQ 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ +L L+ +N+ +TI+L+ H + + +R+ V + G+VV EG+ +VF+N
Sbjct: 175 TTDSILDLLSDINERLGLTIVLITHEMHVIRKICNRVAVMENGKVVEEGEVLDVFKN 231
>gi|11499426 cobalt transport ATP-binding protein (cbiO-2) [Archaeoglobus
fulgidus] >gi|7445783|pir||H69479 cobalt transport
ATP-binding protein (cbiO-2) homolog - Archaeoglobus
fulgidus >gi|2648707|gb|AAB89412.1| (AE000976) cobalt
transport ATP-binding protein (cbiO-2) [Archaeoglobus
fulgidus]
Length = 238
Score = 139 bits (346), Expect = 4e-32
Identities = 80/243 (32%), Positives = 142/243 (57%), Gaps = 10/243 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+ +IE ++VS+ Y + A +R+V+L + +G+ +G+IG +GSGKST L L GL+ +
Sbjct: 5 LKVIEADSVSYDYPDGSA-GVREVSLEIFEGDRVGLIGANGSGKSTLILLLAGLLRPT-- 61
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
+G + + G + +V E+ ++G+VFQNPD LFN TV +E+ + L EEM
Sbjct: 62 ---KGKIRIFGREIDKKNVEEIRRKIGVVFQNPDDFLFNPTVRDELLYVPRQLEWSEEEM 118
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
++ ++ + + P LSGGEK+++ IASVL+ KP+VL+LDEPT+ +D +
Sbjct: 119 ENAVKEYAEMFGITHLLNKPPFRLSGGEKKKVEIASVLIYKPEVLLLDEPTAYVDGKTKR 178
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
+L ++ ++ K T+++ H D + AD+ V+ + + +E+ +N E LE+
Sbjct: 179 LILKIL----EDFKGTLVIATHELDVAEKLADKFVLLNLEHRIEAAGGKEILKNEELLEK 234
Query: 241 IGI 243
G+
Sbjct: 235 AGV 237
>pir||S76536 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001651|dbj|BAA10382.1| (D64002) ABC transporter
[Synechocystis sp.]
Length = 284
Score = 139 bits (346), Expect = 4e-32
Identities = 80/243 (32%), Positives = 134/243 (54%), Gaps = 13/243 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I V +SF YG L ++ V GE LGIIG +G GK+T L L GL+ S
Sbjct: 51 IRVRELSFAYGGQTPV-LNNLAWQVAPGERLGIIGHNGCGKTTLFLLLCGLLKASA---- 105
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G + + G + + VG +FQNP QLF +V +++AF +N+G+ ++ R
Sbjct: 106 -GTIQLLG---QALEAGKFLPEVGFLFQNPTDQLFATSVWDDIAFGPQNMGLSPAQVTER 161
Query: 124 IRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
+ A +L + + P +LSGGEKQ +AIA +L M PK+L+ DEPT+ LD R +++
Sbjct: 162 VNQAAELTGITSLLDRLPQHLSGGEKQMVAIAGLLAMAPKILLCDEPTASLDIKARRQLI 221
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGI 243
+ + + T+++ H+ +F+LE +R+++ D G++V +G +E+ + +E G+
Sbjct: 222 NFLGQFQQ----TLLISSHDLEFVLEVCNRVIIIDQGQIVADGPAQEIMADQTLMESHGL 277
Query: 244 RIP 246
P
Sbjct: 278 EKP 280
>gi|11467821 probable transport protein [Nephroselmis olivacea]
>gi|5880750|gb|AAD54843.1|AF137379_66 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 343
Score = 138 bits (343), Expect = 1e-31
Identities = 86/233 (36%), Positives = 136/233 (57%), Gaps = 14/233 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I +EN+S +G +A L VNL VK G + ++GPSGSGKST + GL
Sbjct: 3 ILIENISKTFGTFRA--LDHVNLEVKAGSLVALVGPSGSGKSTLLRMIAGL-----ERAD 55
Query: 64 EGNVFVDGLNTREHSVAELSTR-VGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMW 121
EG +++ G R+ + A + R +G VFQN LF ++ V + ++F LE ++
Sbjct: 56 EGKIWLAG---RDATYAPIQKRHIGFVFQN--YALFKHLNVAKNISFGLEVRQANPNQIR 110
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
R+R L+L++L + +P LSGG++QR+A+A L ++PKVL+LDEP LD R E
Sbjct: 111 SRVRDLLQLIQLEHMADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDARVRRE 170
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ S +R L++E +T + V H+ +E A IVVF+ GR+ G P+E++++
Sbjct: 171 LRSWLRDLHQEMPVTTVFVTHDQQEAMEVAHEIVVFNQGRLEQVGSPQEIYDH 223
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 138 bits (343), Expect = 1e-31
Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 10/217 (4%)
Query: 18 AYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREH 77
A S+R V+ +++GE +G++GPSGSGK+T + GL +G+V++ G R
Sbjct: 16 ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGL-----ERPTKGDVWIGG--KRVT 68
Query: 78 SVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDK 136
+ VGLVFQN LF +MTV + V+F L V ++EM R+R L+ ++L
Sbjct: 69 DLPPQKRNVGLVFQN--YALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESY 126
Query: 137 REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKIT 196
FP LSGG++QR+A+A L +P+VL+ DEP + +D R E+ + VR ++ E +T
Sbjct: 127 ANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVT 186
Query: 197 IILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+ V H+ + LE ADR++V G V G PEEV+E
Sbjct: 187 SVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYE 223
>dbj|BAB05182.1| (AP001512) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 240
Score = 138 bits (343), Expect = 1e-31
Identities = 89/235 (37%), Positives = 147/235 (61%), Gaps = 16/235 (6%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSING 61
+I V+++ +G+ + L+ + ++KG+ + +IGPSGSGKSTF LN L +P S
Sbjct: 1 MINVKDLHKSFGSLEV--LKGITTEIQKGDVVAVIGPSGSGKSTFLRCLNLLEVPTS--- 55
Query: 62 EFEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVER 117
G+V++D + + +V +L T++G+VFQ+ LF +MTV+E + FA ++ GV +
Sbjct: 56 ---GHVWIDDEEITHPKTNVGKLRTKIGMVFQH--FHLFPHMTVMENLTFAPMKVKGVSK 110
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
E + L+ V L +KR+E+P LSGG+KQR+AIA L M P+V++ DEPTS LDP
Sbjct: 111 AEAIAKGESLLQKVGLLEKRDEYPSRLSGGQKQRVAIARALAMDPEVMLFDEPTSALDPE 170
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+EVL++++ L E +T+++V H F E ADR++ D G ++ + P++ F
Sbjct: 171 MVKEVLAVMKDL-AETGMTMVIVTHEMGFAKEVADRVLFLDQGILLEDLPPKQFF 224
>pir||F81363 probable glutamine transport ATP-binding protein Cj0902 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968340|emb|CAB73160.1| (AL139076) putative
glutamine transport ATP-binding protein [Campylobacter
jejuni]
Length = 242
Score = 137 bits (342), Expect = 1e-31
Identities = 91/249 (36%), Positives = 140/249 (55%), Gaps = 20/249 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IEV+N+ KYG + L+++N + KG+ + IIGPSG GKSTF +N L
Sbjct: 1 MIEVKNLQKKYGELEV--LKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELAD---- 54
Query: 63 FEGNVFVDGLNT--REHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGV-ERE 118
G + ++ N +E + ++ +V +VFQ+ LF N V+E + G+ +E
Sbjct: 55 -SGEILINKQNILDKEIDINKIRQKVSMVFQH--FNLFANKNVMENLCLTPIKTGILSQE 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E ++ + L V L DK P LSGG+KQR+AIA L+M P V++ DEPTS LDP
Sbjct: 112 EAIKKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEM 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--- 235
EVLS+++ + K E +T+++V H F A+RI D G++ ++ P+EVFEN
Sbjct: 172 IGEVLSIMKDVAK-EGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDASPKEVFENPSNE 230
Query: 236 ---EFLERI 241
EFL ++
Sbjct: 231 RLREFLNKV 239
>gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus] >gi|7445658|pir||C69341 cobalt transport
ATP-binding protein (cbiO-1) homolog - Archaeoglobus
fulgidus >gi|2649880|gb|AAB90507.1| (AE001054) cobalt
transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus]
Length = 326
Score = 137 bits (341), Expect = 2e-31
Identities = 90/245 (36%), Positives = 138/245 (55%), Gaps = 16/245 (6%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSING 61
+IE ++ F YG+++ L+ VN ++G+ ++G +G+GK+T LNGL+ P S
Sbjct: 34 MIEAVDLHFCYGDAEV--LKGVNFKAERGKVTVLMGRNGAGKTTLLKHLNGLLRPKS--- 88
Query: 62 EFEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
G V +DG L S+ E+ RV VFQNPD Q+ + TV ++VAF NLG++ E
Sbjct: 89 ---GKVIIDGRELKYDRKSLLEVRKRVFYVFQNPDDQILSPTVWQDVAFGPRNLGLKGER 145
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
+ R +R AL+ V L + LSGGEK+RLAIAS L M P ++DEP++ +D G
Sbjct: 146 LERVVRNALEAVGLSGYEKRLCSTLSGGEKRRLAIASALAMNPDYCIMDEPSANVDGEGL 205
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLE 239
+ ++R L +E K +++ H+ D E D D G++V EG EE +V
Sbjct: 206 RMIAEIIRKLREEGK-GVVVSTHDADLAKEVGDYFYFMDDGKIVWEG--EEFSYSV--AR 260
Query: 240 RIGIR 244
++GIR
Sbjct: 261 KLGIR 265
>pir||H64716 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2314761|gb|AAD08616.1| (AE000655) ABC
transporter, ATP-binding protein (abc) [Helicobacter
pylori 26695]
Length = 327
Score = 136 bits (340), Expect = 2e-31
Identities = 90/252 (35%), Positives = 140/252 (54%), Gaps = 21/252 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++E++N+ Y N ++L+ VNL +KKG+ LG+IG SG+GKST +N L S
Sbjct: 2 VVELKNIEKIYENG-FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPS---- 56
Query: 63 FEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNM----TVLEEVAFALENLGV 115
G V V+G+N + EL ++G++FQ+ FN+ V E VAFALE
Sbjct: 57 -SGEVLVNGVNLLKLKPKELQKARQKIGMIFQH-----FNLLSAKNVFENVAFALEIARW 110
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
E+ ++ R+ L+LV L DK +P LSGG+KQR+AIA L P +L+ DE TS LD
Sbjct: 111 EKNKIKSRVHELLELVGLEDKMHFYPKQLSGGQKQRVAIARSLANCPDLLLCDEATSALD 170
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV 235
+L+L+ + K+ ++I+ + H + + E +++ V G +V G EE+F N
Sbjct: 171 SKTTHSILTLLSGIQKKLDLSIVFITHEIEVVKELCNQMCVISSGEIVERGSVEEIFANP 230
Query: 236 EFL---ERIGIR 244
+ E +GIR
Sbjct: 231 KHAVTKELLGIR 242
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 136 bits (339), Expect = 3e-31
Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 14/282 (4%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+ +ENVS +YGN +++R++NL V+ GE L +IGPSGSGK+T +N L+
Sbjct: 9 VVLENVSKRYGNF--FAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPD----- 61
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
EG V ++G + E L +G V Q LF +M V E + + G E E++ +
Sbjct: 62 EGRVLINGQDISEIDAVRLRRNIGYVIQQIG--LFPHMKVWENIGLIPKLEGWEEEKIRQ 119
Query: 123 RIRWALKLVKL-WDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
R+ LKLV L + E +P LSGG++QR+ +A L + P +L++DEP LDP+ R++
Sbjct: 120 RVDELLKLVDLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQ 179
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--EFLE 239
+ + +E TI+ V H+ + DRI + + GR+V G+PEE+ N EF+E
Sbjct: 180 LQEEFARIKEELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPANEFVE 239
Query: 240 RI-GIRIPTRVKIGYELKKRGITRRAVLSYEEIIAEIAKQLR 280
I G R R ++K I+ L +AE K+ R
Sbjct: 240 DITGARRKFRHLDTLKVKDFMISAEKYLIQNMEVAEALKEFR 281
>emb|CAB65561.1| (AL136058) probable amino acid ABC transporter protein, ATP-binding
component. [Streptomyces coelicolor A3(2)]
Length = 261
Score = 136 bits (339), Expect = 3e-31
Identities = 89/239 (37%), Positives = 138/239 (57%), Gaps = 14/239 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I +E V+ ++G++ L ++ +V G+ + +IGPSGSGK+T L L+
Sbjct: 20 LIRLEQVTKRFGDNTV--LDHLDFSVDAGKHVTLIGPSGSGKTTILRLLMTLLKPD---- 73
Query: 63 FEGNVFVDGLN---TREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVER 117
EG + VDG E E+ ++G+VFQ LF NM+VL + A + LG+ +
Sbjct: 74 -EGTITVDGQKLFPATEKERREVRKQIGMVFQQ--FNLFPNMSVLRNITEAPVTVLGMPK 130
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+E R + L +V L DK + P LSGG++QR+AIA L M+PKVL+LDE TS LDP
Sbjct: 131 DEAVERAKGLLDMVGLADKCDARPAQLSGGQQQRVAIARALAMRPKVLLLDEVTSALDPE 190
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
VL L+R + + IT++ V H +F + +D++++FD GRV+ G PE++F E
Sbjct: 191 LVAGVLDLLRDIARSTDITMLCVTHEMNFARDISDQVLMFDSGRVIEAGAPEKIFSEPE 249
>pir||F83488 probable ATP-binding component of ABC transporter PA1256 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947188|gb|AAG04645.1|AE004555_5 (AE004555) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 240
Score = 136 bits (339), Expect = 3e-31
Identities = 98/248 (39%), Positives = 135/248 (53%), Gaps = 18/248 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE+ +V YG + ++ V+L V KGE L IIG SGSGKST + +NGL P
Sbjct: 1 MIEINDVHKAYGQFEV--VKGVDLRVDKGEVLSIIGGSGSGKSTLLMCINGLEPIQ---- 54
Query: 63 FEGNVFVDGLNT--REHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALEN-LGVEREE 119
G++ VDG++ R + L ++G+VFQ ++ ++TVLE V A LG R E
Sbjct: 55 -RGSIRVDGIDVHARGTDLNRLRRKIGIVFQQWNA-FPHLTVLENVMLAPRKVLGKSRAE 112
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
L V L DK + FP LSGG++QR+AIA L M P ++ DE TS LDP
Sbjct: 113 AEAMALKQLTHVGLGDKLKVFPQRLSGGQQQRMAIARALAMSPDYMLFDEATSALDPQLV 172
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF------E 233
EVL +RLL EE +T++LV H F + +DR+ F G V G P++V E
Sbjct: 173 GEVLDTMRLL-AEEGMTMVLVTHEIRFARDVSDRVAFFRNGLVHEIGPPDQVIGNPQRPE 231
Query: 234 NVEFLERI 241
VEFL +
Sbjct: 232 TVEFLRSV 239
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 136 bits (338), Expect = 4e-31
Identities = 86/232 (37%), Positives = 134/232 (57%), Gaps = 12/232 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
IIE+ +++ YG++ ++D NL + GEFL I+GPSG GK+T L GL
Sbjct: 10 IIELRSITKSYGSNTI--IKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELD---- 63
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMW 121
GN+ +DG + +V V VFQ+ LF +MT+ E VAF L V E+
Sbjct: 64 -SGNIILDGEDIT--NVPAEKRHVNTVFQS--YALFPHMTIFENVAFGLRMQKVPEAEIK 118
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
R+ AL++V+L + + P LSGG++QR+AIA +V KPKVL+LDE S LD R++
Sbjct: 119 PRVLEALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQ 178
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+ +++L ++ IT I V H+ + + +DRIV+ G++ +G P E++E
Sbjct: 179 MQYELKVLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYE 230
>pir||E72757 probable phosphate transport ATP-binding protein pstB APE0050 -
Aeropyrum pernix (strain K1) >gi|5103438|dbj|BAA78959.1|
(AP000058) 253aa long hypothetical phosphate transport
ATP-binding protein pstB [Aeropyrum pernix]
Length = 253
Score = 135 bits (337), Expect = 5e-31
Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 7/237 (2%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +++V + + L+ ++ + G I+GPSGSGKST +N LI
Sbjct: 1 MKLMDVRVSGLNVWITDKHILKGISFKAQPGTVTAIMGPSGSGKSTLIRVINRLIDLIPG 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFA--LENLGVERE 118
EG V+++ +N + + G+VFQ P+ +MT+ E VA L L ++
Sbjct: 61 ARVEGEVWINNMNVMKEDPYNIRRYTGMVFQEPNP-FPHMTIYENVAIGPKLHGLAKNKK 119
Query: 119 EMWRRIRWALKLVKLWD----KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
E+ + WALK+ LWD + ++P LSGG++QRL++A L +KP+VL+LDEPT+ +
Sbjct: 120 ELDEIVEWALKMAHLWDEVKDRLSDYPHQLSGGQRQRLSLARALALKPRVLLLDEPTANI 179
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
DP+ ++ + KEE T+I+V H +D+I+ GRV+ G +E+
Sbjct: 180 DPVSTVKIEQSIVEYAKEEMATVIIVTHTPQQAARISDQILFLYEGRVIEYGPTKEL 236
>sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN IN
BMRU-ANSR INTERGENIC REGION >gi|7442518|pir||H69962
ABC-type transport protein yqiZ - Bacillus subtilis
>gi|1303951|dbj|BAA12606.1| (D84432) YqiZ [Bacillus
subtilis] >gi|2634830|emb|CAB14327.1| (Z99116) similar
to amino acid ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 240
Score = 135 bits (337), Expect = 5e-31
Identities = 91/249 (36%), Positives = 143/249 (56%), Gaps = 20/249 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I+VE +S +G + L++++ + +GE + +IGPSGSGKSTF LN L NG
Sbjct: 1 MIKVEKLSKSFGKHEV--LKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLL--EKPNG- 55
Query: 63 FEGNVFVDGLNTREHSVAELSTR--VGLVFQNPDSQLF-NMTVLEEVAFALENLGVE-RE 118
G + + + L R +G+VFQ+ LF + TVLE + +A N+ E ++
Sbjct: 56 --GTITIKDTEITKPKTNTLKVRENIGMVFQH--FHLFPHKTVLENIMYAPVNVKKESKQ 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
+ L+ V L++KR ++P LSGG+KQR+AIA L M P +++ DEPTS LDP
Sbjct: 112 AAQEKAEDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEM 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN---- 234
+EVL +++ L E +T+++V H F E ADR++ D G +V +G P+E F +
Sbjct: 172 VKEVLQVMKEL-VETGMTMVIVTHEMGFAKEVADRVLFMDQGMIVEDGNPKEFFMSPKSK 230
Query: 235 --VEFLERI 241
+FLE+I
Sbjct: 231 RAQDFLEKI 239
>pir||S77760 probable ABC-type transport protein - Mycoplasma capricolum
(fragment) >gi|560480|emb|CAA83843.1| (Z33339) ABC
transporter (sulfate) [Mycoplasma capricolum]
Length = 178
Score = 135 bits (336), Expect = 7e-31
Identities = 72/166 (43%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 79 VAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKL-WDKR 137
V L +G VFQ P+ QLF T+ +++AF NLG ++E ++++ LKLV+L D
Sbjct: 11 VKRLRKEIGXVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYV 70
Query: 138 EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITI 197
+ P LSGG+K+R+A+A ++ M LVLDEPT LDP G E+ ++L LNKE K I
Sbjct: 71 KRSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRI 130
Query: 198 ILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGI 243
I+V HN D +L AD ++V G+V+ G P E+F N+E L +I I
Sbjct: 131 IMVTHNMDQVLRIADEVIVMHEGKVIDIGSPFEIFSNIELLTKIEI 176
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 135 bits (336), Expect = 7e-31
Identities = 84/233 (36%), Positives = 134/233 (57%), Gaps = 12/233 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
IIE+ ++ YG++ + D NL + GEF+ I+GPSG GK+T L GL
Sbjct: 19 IIELRSIKKSYGSNTI--INDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELD---- 72
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMW 121
G++ +DG + +V + VFQ+ LF +MT+ E VAF L V EE+
Sbjct: 73 -SGSIILDGEDIT--NVPAEKRHINTVFQS--YALFPHMTIFENVAFGLRMQKVPNEEIK 127
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
R+ AL++V+L + + P LSGG++QR+AIA +V KPKVL+LDE S LD R++
Sbjct: 128 PRVLEALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQ 187
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ +++L ++ IT I V H+ + + +DRIV+ G++ +G P E++E+
Sbjct: 188 MQQELKMLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYED 240
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 135 bits (336), Expect = 7e-31
Identities = 92/244 (37%), Positives = 135/244 (54%), Gaps = 16/244 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+ IEV+N+ K+ L ++L VK GE + IIGPSGSGK+T ++N L
Sbjct: 1 MSAIEVKNLVKKFHGQTV--LHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAG 58
Query: 61 GEFEGNVFVD---GLNTREHSVAELSTRVGLVFQNPDSQLFNM----TVLEEVAFALENL 113
G++ +D L+ ++ + +L VG VFQN FN+ TVLE + +
Sbjct: 59 TITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQN-----FNLFPHRTVLENIIEGPVIV 113
Query: 114 -GVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTS 172
G +EE R R L V L K +P LSGG++QR+AIA L M+P+V++ DEPTS
Sbjct: 114 KGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTS 173
Query: 173 QLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
LDP EVL+ +R L +EK T+++V H F + ADR + D GR+V +G + +F
Sbjct: 174 ALDPELVGEVLNTIRQL-AQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALF 232
Query: 233 ENVE 236
+ E
Sbjct: 233 ADPE 236
>pir||E83012 probable ATP-binding component of ABC transporter PA5074 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951367|gb|AAG08459.1|AE004920_9 (AE004920) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 244
Score = 135 bits (336), Expect = 7e-31
Identities = 94/239 (39%), Positives = 136/239 (56%), Gaps = 16/239 (6%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+IEV N+ F ++ DV+ V +GE L +IGPSGSGKSTF LNGL
Sbjct: 1 MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGKSTFLRCLNGL------ 54
Query: 61 GEF-EGNVFVDGLNTREH--SVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVE 116
EF EG+V +DG++ + + VG+VFQ+ LF +MTVLE + A +
Sbjct: 55 EEFDEGSVSIDGVDLADPRTDINAYRREVGMVFQH--FNLFPHMTVLENLCLAQRVVRKR 112
Query: 117 -REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+ E + R L V + K +E+P LSGG++QR+AIA L M PKV++ DEPTS LD
Sbjct: 113 GKAEREAKARALLAKVGIGQKADEYPSRLSGGQQQRVAIARALCMDPKVMLFDEPTSALD 172
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
P EVL +++ L E +T++ V H F E ADR++ FD G+++ + P + F+N
Sbjct: 173 PEMVGEVLDVMKTL-AVEGMTMVCVTHEMGFAREVADRVLFFDHGKLLEDAPPAQFFDN 230
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 135 bits (336), Expect = 7e-31
Identities = 83/231 (35%), Positives = 130/231 (55%), Gaps = 9/231 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M IEVEN+ K+G+ +A +R V+ VK+GE +GP+G+GK+T L L+ +
Sbjct: 77 MYAIEVENLVKKFGDFEA--VRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPT-- 132
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G FV GL+ + E+ R+G+VFQ+P ++T E + G++ +E+
Sbjct: 133 ---SGKAFVAGLDVVREA-REVRRRIGIVFQDPSVDR-DLTAYENMLVHGGVYGLKGKEL 187
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+I LK V+LW+ R++ SGG ++RL IA L+ P+VL LDEPT LDP R
Sbjct: 188 KEKIERLLKFVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRA 247
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
V S + + +E+ +TI L H + + ADR+ + D GR++ EG EE+
Sbjct: 248 HVWSYIEAMKEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEEL 298
>pir||F71800 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4156118|gb|AAD07069.1| (AE001570) abc
transporter, ATP-binding protein [Helicobacter pylori
J99]
Length = 327
Score = 134 bits (335), Expect = 9e-31
Identities = 85/239 (35%), Positives = 134/239 (55%), Gaps = 18/239 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++E++N+ Y N ++L+ VNL +KKG+ LG+IG SG+GKST +N L S
Sbjct: 2 VVELKNIEKIYENG-FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPS---- 56
Query: 63 FEGNVFVDG---LNTREHSVAELSTRVGLVFQNPDSQLFNM----TVLEEVAFALENLGV 115
G V V+G LN + + + ++G++FQ+ FN+ V E VAFALE
Sbjct: 57 -SGEVLVNGVNLLNLKPKELQKARQKIGMIFQH-----FNLLSAKNVFENVAFALEIARW 110
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
E+ ++ R+ L+LV L DK +P LSGG+KQR+AIA L P +L+ DE TS LD
Sbjct: 111 EKTKIKSRVHELLELVGLEDKVHFYPKQLSGGQKQRVAIARSLANCPNLLLCDEATSALD 170
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+L+L+ + K+ ++I+ + H + + E +++ V G +V G EE+F N
Sbjct: 171 SKTTHSILTLLSGIQKKFDLSIVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFAN 229
>gi|7524830 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023607|sp|P56344|CYSA_CHLVU PROBABLE SULFATE
TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|7442559|pir||T07260 sulfate transport ATP-binding
protein - Chlorella vulgaris chloroplast
>gi|2224423|dbj|BAA57907.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 134 bits (334), Expect = 1e-30
Identities = 82/232 (35%), Positives = 137/232 (58%), Gaps = 12/232 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I +EN+S ++G+ +A L VNL +K G +G++GPSGSGKST L GL
Sbjct: 3 ILIENISKRFGSFQA--LDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPD----- 55
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
G ++++G + + + + +G VFQN LF ++TV E VAF LE ++ +
Sbjct: 56 SGRIWLEGQDATQMKLQD--REIGFVFQN--YALFPHLTVSENVAFGLEIQKIDSLLKKK 111
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ LKL++L + +P LSGG++QR+A+A L M+PKVL+LDEP + LD R+++
Sbjct: 112 RVNELLKLMQLEKFGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQL 171
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
S +R L+ + +T + V H+ +E A IV+ + G+++ G +E+ ++
Sbjct: 172 RSWLRELHHKISVTTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQELSDH 223
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 134 bits (334), Expect = 1e-30
Identities = 93/237 (39%), Positives = 140/237 (58%), Gaps = 17/237 (7%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +IE VS YG +A L+ ++L V KGE + I GPSGSGKST T+NGL SI+
Sbjct: 1 MKVIEFHQVSKWYGQFQA--LKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGL--ESID 56
Query: 61 -GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVER 117
GE + + L+ R S ++G+VFQ+ LF ++TVLE + A + L +
Sbjct: 57 SGEI---IVLPELDERTRR----SGKIGMVFQH--FNLFPHLTVLENLTLAPIRTLKLSA 107
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+E R L+ VK+ D+ ++P LSGG++QR+AIA L M+P++L+ DEPTS LDP
Sbjct: 108 QEAKERAYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPE 167
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
EVL ++ L ++ IT++ V H F + A R++ D G ++ G PE++F+N
Sbjct: 168 TINEVLEVMVDL-AQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQN 223
>dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 338
Score = 134 bits (333), Expect = 1e-30
Identities = 82/225 (36%), Positives = 127/225 (56%), Gaps = 9/225 (4%)
Query: 11 FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVD 70
FK ++ VNL + +GE G+IG SG+GKST LN L EG+V V
Sbjct: 11 FKAKRGSVTAVDGVNLKINEGEIFGVIGYSGAGKSTLIRMLNML-----ERPTEGSVIVA 65
Query: 71 GLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWA 127
G + + S +L ++G++FQ+ + L++ TV + +AF LE GV ++E +R+
Sbjct: 66 GKDLSKLSDRDLRIERQKIGMIFQH-FNLLWSRTVRKNIAFPLEIAGVPKKEREKRVDEL 124
Query: 128 LKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVR 187
+ LV L + E +P LSGG+KQR+ IA L PKVL+ DE TS LDP + +L L+
Sbjct: 125 INLVGLEGREEAYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPKTTDSILDLLV 184
Query: 188 LLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+N++ +TI+L+ H + + R+ V + G+VV EG +VF
Sbjct: 185 DINEKLGLTIVLITHEMHVIRKICHRVAVMEAGKVVEEGPVLDVF 229
>gb|AAG20427.1| (AE005115) cobalt transport ATP-binding protein; CbiO1
[Halobacterium sp. NRC-1]
Length = 232
Score = 134 bits (333), Expect = 1e-30
Identities = 88/229 (38%), Positives = 131/229 (56%), Gaps = 9/229 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++ V N+ +YG++ A V+L+V GE + + G +GSGK+T NGL+
Sbjct: 1 MLSVRNLVHRYGDTVAVD--GVSLDVADGECVVVTGANGSGKTTLVRHCNGLLEPD---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
+G V V+G E VA ++ VG+VFQNP TV +VAF ENLG REE+
Sbjct: 55 -DGEVLVNGTPVGEDLVAARAS-VGMVFQNPRDGFVGATVGADVAFGPENLGRPREEIDA 112
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ AL V+L +R+E +LSGGE++R+AIA+ L M+P LVLDEP + LD R+ V
Sbjct: 113 RVADALDAVELGGRRDERVADLSGGEQERVAIAAALAMRPDHLVLDEPFTGLDWPARQSV 172
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
L +R L+ ++I+V H+ + ADR+V G + + G P +V
Sbjct: 173 LDRLRALH-AAGTSLIVVTHDLRDVWTLADRVVAMRDGEIALRGDPADV 220
>pir||B75270 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460289|gb|AAF12012.1|AE002076_4
(AE002076) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 226
Score = 134 bits (333), Expect = 1e-30
Identities = 88/228 (38%), Positives = 133/228 (57%), Gaps = 14/228 (6%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE+ +VS Y LR ++L +++ +G++G +GSGKSTF LN L+ +
Sbjct: 1 MIELRHVSHHYDERPV--LRPLSLTLRERR-IGVVGSNGSGKSTFARLLNALLLPAA--- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
G V VDGL+TR+ + +VG VFQNPD Q+ V E++AF L+NL + E+
Sbjct: 55 --GQVLVDGLDTRQDPKG-VRRKVGFVFQNPDHQIVFPVVEEDLAFGLKNLKLPPAEVEA 111
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
RI L+ L + R+ LSGG+KQ LAI+ VLVM+P+ +V DEPT+ LD R V
Sbjct: 112 RIGEVLERYDLGEYRQHPSHLLSGGQKQLLAISGVLVMRPEYVVFDEPTTLLDLRNRNRV 171
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEE 230
+ +R L + T I+V H+ D LL +R++VF+ G ++ + P E
Sbjct: 172 AAAIRELPQ----TAIVVTHDLD-LLRDFERVLVFEAGELIADAPPAE 214
>gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori]
Length = 327
Score = 133 bits (332), Expect = 2e-30
Identities = 88/252 (34%), Positives = 140/252 (54%), Gaps = 21/252 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++E++N+ Y N ++L+ VNL +KKG+ LG+IG SG+GKST +N L S
Sbjct: 2 VVELKNIEKIYENG-FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPS---- 56
Query: 63 FEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMT----VLEEVAFALENLGV 115
G V V+G+N + EL ++G++FQ+ FN+ V E VAFALE
Sbjct: 57 -SGEVLVNGVNLLKLKPKELQKARQKIGMIFQH-----FNLLSAKDVFENVAFALEIARW 110
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
E+ ++ R+ L+LV L DK +P LSGG+K+R+AIA L P +L+ DE TS LD
Sbjct: 111 EKTKIKSRVHELLELVGLEDKVHFYPKQLSGGQKERVAIARSLANCPDLLLCDEATSALD 170
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV 235
+L+L+ + K+ ++++ + H + + E +++ V G +V G EE+F N
Sbjct: 171 SKTTHSILTLLSGIQKKLDLSVVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFANP 230
Query: 236 EFL---ERIGIR 244
+ E +GIR
Sbjct: 231 KHAVTKELLGIR 242
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 133 bits (332), Expect = 2e-30
Identities = 86/261 (32%), Positives = 149/261 (56%), Gaps = 23/261 (8%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I ++NVS +G+ +A L D+NL+++ GE + ++GPSGSGK++ + GL
Sbjct: 3 IVIQNVSKSFGSFQA--LADINLSIETGELVALLGPSGSGKTSLLRIIAGL-----EAAD 55
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALE----NLGVERE 118
+G+++ + A S +VG VFQ+ LF +MTV + +++ L ++
Sbjct: 56 QGDIYFHKDKVTQTHAA--SRQVGFVFQH--YALFPHMTVADNISYGLRVKPRKERPSKK 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E+ ++R L LVKL + +P LSGG++QR+A+A L ++PKVL+LDEP LD
Sbjct: 112 EIAEKVRELLALVKLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKV 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN---- 234
R+++ +R L+ E ++T + V H+ + L+ +DR+VV + G++ G P+EV+E
Sbjct: 172 RKDLRKWLRKLHNEFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEVYEQPKSP 231
Query: 235 --VEFLERIGIRIPTRVKIGY 253
+FL + + RVK G+
Sbjct: 232 FVYDFLGNVNV-FTGRVKQGF 251
>pir||T35147 glutamate uptake system ATP-binding protein - Streptomyces
coelicolor >gi|2687342|emb|CAA15883.1| (AL020958)
glutamate uptake system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 258
Score = 133 bits (332), Expect = 2e-30
Identities = 86/239 (35%), Positives = 141/239 (58%), Gaps = 20/239 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++ +++V+ +G + L+D++L +++GE + +IGPSGSGKST C T+N L +++
Sbjct: 17 LVVLKSVNKHFG--ALHVLQDIDLTIQRGEVVVVIGPSGSGKSTLCRTINRL--ETVD-- 70
Query: 63 FEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNM----TVLEEVAFALENLG-V 115
+G++ +DG L +A L VG+VFQ+ FN+ TVLE V + V
Sbjct: 71 -DGSITIDGKPLPAEGKELARLRADVGMVFQS-----FNLFAHKTVLENVTLGQVKVRKV 124
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+ ++ + R L V + + +++P LSGG++QR+AIA L M PKV++ DEPTS LD
Sbjct: 125 DAKKAEEKARALLDRVGVGAQADKYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALD 184
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
P EVL +++ L E+ +T+I+V H F A+R+V GR+V E P++ F N
Sbjct: 185 PEMINEVLEVMKQL-AEDGMTMIVVTHEMGFARSAANRVVFMADGRIVEEATPDQFFSN 242
>sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA >gi|7442619|pir||G69669
choline ABC transporter (ATP-binding protein) opuBA -
Bacillus subtilis >gi|2293447|gb|AAC14356.1| (AF008930)
ATPase [Bacillus subtilis] >gi|2635886|emb|CAB15378.1|
(Z99121) choline ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 381
Score = 133 bits (331), Expect = 3e-30
Identities = 82/241 (34%), Positives = 132/241 (54%), Gaps = 12/241 (4%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++ +ENVS Y K ++ +VNL + KGEF+ IGPSG GK+T +N LI S
Sbjct: 1 MLTLENVSKTYKGGKK-AVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSA--- 56
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMW 121
G +F+DG N + EL ++G V Q LF +MT+ + ++ + L ++
Sbjct: 57 --GKIFIDGENIMDQDPVELRRKIGYVIQQIG--LFPHMTIQQNISLVPKLLKWPEQQRK 112
Query: 122 RRIRWALKLVKLWDKR-EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R R LKLV + + + +P LSGG++QR+ + L +P ++++DEP LDP+ R+
Sbjct: 113 ERARELLKLVDMGPEYVDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRD 172
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--EFL 238
+ + L K TI+ V H+ D ++ ADRIV+ G +V G P+++ N EF+
Sbjct: 173 SLQEEFKKLQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFV 232
Query: 239 E 239
E
Sbjct: 233 E 233
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 133 bits (331), Expect = 3e-30
Identities = 87/238 (36%), Positives = 139/238 (57%), Gaps = 20/238 (8%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+E+ ++ ++G + L+ V + V+KGE + IIGPSGSGKST +N L +
Sbjct: 4 LEIIDLHKRFGELEV--LKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPT----- 56
Query: 64 EGNVFVDGLNTREHSVA--ELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGV----E 116
G + +DG++ + ++ R+G+VFQ LF ++T L+ V A + E
Sbjct: 57 SGKILLDGVDITNSKIDINKVRQRIGIVFQQ--FNLFPHLTALQNVTLAPIKIKKMSKRE 114
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
EE+ R+ L+ V L DK + +P LSGG++QR+AIA L M P+V++ DE TS LDP
Sbjct: 115 AEELGMRL---LEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDP 171
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL +++ L + + +T+++V H F E DR++ DGG +V EGKPE++F N
Sbjct: 172 ELVKEVLDVMKQLAR-DGMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSN 228
>sp|P47426|Y180_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG180
>gi|1361718|pir||I64219 membrane transport protein
(glnQ) homolog MG180 - Mycoplasma genitalium
>gi|3844776|gb|AAC71399.1| (U39697) ABC transporter,
ATP-binding protein [Mycoplasma genitalium]
Length = 304
Score = 132 bits (330), Expect = 3e-30
Identities = 75/238 (31%), Positives = 136/238 (56%), Gaps = 2/238 (0%)
Query: 15 NSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNT 74
N+ + D + +K + IIG SGSGKST NGLI + + ++++
Sbjct: 31 NNPIKVIDDFSYTFQKNQIYCIIGDSGSGKSTLVNHFNGLIKPNQGDIWVKDIYIGAKQR 90
Query: 75 REHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKL- 133
+ + +L + +VFQ P+ QLF TV +++ F LG + + ++ + L+++ L
Sbjct: 91 KIKNFKKLRKTISIVFQFPEYQLFKDTVEKDIMFGPVALGQSKYDARQKAAYYLEMMGLK 150
Query: 134 WDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEE 193
+ E P LSGG+K+R+AIA +L ++P++L+ DEPT+ LDP G E++ L++ K++
Sbjct: 151 YPFLERNPFELSGGQKRRVAIAGILAIEPEILIFDEPTAGLDPEGEREMMQLIKTA-KQQ 209
Query: 194 KITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVKI 251
+ T+ ++ H + +LE AD ++V G++V P EVF + FLE+ I +P +++
Sbjct: 210 QRTVFMITHQMENVLEVADVVLVLAKGKLVKAASPYEVFMDQTFLEKTTIVLPPVIQV 267
>sp|Q05596|CBIO_SALTY COBALT TRANSPORT ATP-BINDING PROTEIN CBIO >gi|154435|gb|AAA27267.1|
(L12006) membrane associated ATPase [Salmonella
typhimurium]
Length = 271
Score = 132 bits (330), Expect = 3e-30
Identities = 81/255 (31%), Positives = 140/255 (54%), Gaps = 10/255 (3%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++ ++ F+Y N L+ +N++ G++G +G GKST + L+GL+
Sbjct: 1 MLATSDLWFRYQNEPV--LKGLNMDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---- 54
Query: 63 FEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
+G V G L+ + + +V VFQ+P+ Q+F + ++AF+L NLG E+
Sbjct: 55 -KGAVLWQGKPLDYSKRGLLARRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGGPEAEI 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
RR+ AL LV R + LS G+K+R+AIA LV++ + L+LDEPT+ LDP GR
Sbjct: 114 TRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRT 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
++++++R + + +I+ H+ D + E +D + V G+++ G P EVF E +E
Sbjct: 174 QMIAIIRRIVAQGN-HVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACTEAMEH 232
Query: 241 IGIRIPTRVKIGYEL 255
G+ P VK+ +L
Sbjct: 233 AGLTQPWLVKLHTQL 247
>emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-binding protein
[Thermoplasma acidophilum]
Length = 372
Score = 132 bits (330), Expect = 3e-30
Identities = 79/235 (33%), Positives = 144/235 (60%), Gaps = 13/235 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M++I +EN++ +YG+ Y L++ NL V+ GEF I+G SGSGK+T ++ GLIP
Sbjct: 1 MSVI-IENLTARYGDK--YILKNFNLRVEDGEFFVILGSSGSGKTTLLRSIAGLIPID-- 55
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
+G + +DG + + ++ + + +VFQN L+ +MTV + ++ L+ V ++E
Sbjct: 56 ---DGRILIDGNDVTDLYPSDRN--IAMVFQN--FALYPHMTVYDNISLNLKIKHVPKDE 108
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
+ +++ +++ + +++P LSGGE+QR+ IA +V P V ++DEP S LD R
Sbjct: 109 IKKKVSDVAEMLHISQHLQKYPRQLSGGEQQRVGIARAMVRDPSVFLMDEPLSNLDAKLR 168
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
E+L +R +++ K TII V H+ D + ADRI+V + G+++ G P+E++++
Sbjct: 169 REMLGELRSFHEKVKKTIIYVCHDQDEAMALADRILVLNQGQIMQLGTPDELYDH 223
>sp|P47650|PSTB_MYCGE PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB HOMOLOG
>gi|1361741|pir||D64245 peripheral membrane protein B
homolog - Mycoplasma genitalium
>gi|3845003|gb|AAC71638.1| (U39723) phosphate ABC
transporter, ATP-binding protein (pstB) [Mycoplasma
genitalium]
Length = 329
Score = 132 bits (329), Expect = 4e-30
Identities = 81/238 (34%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N+ E+ N +F Y +K L D+NL++K+ + +IG SG GKSTF LN L + N
Sbjct: 81 NVFEIRNFNFWYNKNKQV-LFDINLDIKRNKITALIGKSGCGKSTFIRCLNKLNDLNENT 139
Query: 62 EFEGNVFVDGLNTREHSVAELSTR--VGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
+ G+++ G N + +L+ R VG+VFQ FN ++ E +A+ + G+ +
Sbjct: 140 RWTGDIYFLGKNINSGIINDLTLRTSVGMVFQKLTP--FNFSIFENIAYGIRAHGIHNKN 197
Query: 120 MWRRI-RWALKLVKLWDK-REEFPPN---LSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
I R AL LWD+ ++ N LSGG++QRL IA + ++P VL++DEPTS L
Sbjct: 198 AINEIVRQALISAALWDEVKDNLHRNANTLSGGQQQRLCIARAIALQPDVLLMDEPTSAL 257
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
D + + L++ L +EK TI++V H+ + D + F GRV+ +G +++F
Sbjct: 258 DSIATNSIELLIQQL--KEKFTIVIVTHSMAQTIRITDETIFFADGRVIEQGTTKQIF 313
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 132 bits (329), Expect = 4e-30
Identities = 87/245 (35%), Positives = 134/245 (54%), Gaps = 20/245 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++++E VS Y K ++ ++L++ KGEF+ IGPSG GK+T +N LI S
Sbjct: 1 MLKLEQVSKVYKGGKK-AVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPS---- 55
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMW 121
G +F+DG N E EL ++G V Q LF +MT+ + ++ + L E+
Sbjct: 56 -SGRIFIDGENIMEQDPVELRRKIGYVIQQIG--LFPHMTIQQNISLVPKLLKWPEEKRK 112
Query: 122 RRIRWALKLVKLWDKR-EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR- 179
R R LKLV + + + +P LSGG++QR+ + L +P ++++DEP LDP+ R
Sbjct: 113 ERARELLKLVDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRD 172
Query: 180 ---EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV- 235
EE L R LNK TI+ V H+ D ++ ADRIV+ G +V G P+E+ N
Sbjct: 173 SLQEEFKKLQRTLNK----TIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPA 228
Query: 236 -EFLE 239
EF+E
Sbjct: 229 NEFVE 233
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 132 bits (329), Expect = 4e-30
Identities = 78/229 (34%), Positives = 137/229 (59%), Gaps = 10/229 (4%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+ +EN++ K+GN A + +NL +K GEFL ++GPSG GK+T + GL + +
Sbjct: 4 VRLENLTKKFGNFTA--VNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKIY 61
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G+ V L RE +++ +VFQ+ + +MTV + +AF L+ R+E+ +R
Sbjct: 62 FGDREVTYLPPRERNIS-------MVFQSY-AVWPHMTVYDNIAFPLKIKKFPRDEIDKR 113
Query: 124 IRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
+RWA +L+++ + + +P LSGG++QR+A+A +V++P VL++DEP S LD R +
Sbjct: 114 VRWAAELLQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMR 173
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ ++ L ++ K+T I V H+ + DRI V + G+++ G P EV+
Sbjct: 174 AEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEVY 222
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 132 bits (328), Expect = 6e-30
Identities = 88/232 (37%), Positives = 131/232 (55%), Gaps = 14/232 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+E+ V K+ + LR V+L VK GE + I+GPSG GK+T + GL
Sbjct: 4 VELRGVEKKF---PGFKLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGL-----ERPD 54
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
+GNV DG + + S +G VFQ D LF +M V + VAF LE + R+E+ R
Sbjct: 55 KGNVLFDGRDVT--FLPPYSRNIGFVFQ--DYALFPHMNVFKNVAFGLEVRKLPRKEIER 110
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
++R L+LV L P LSGG++QR+A+A LV++P+VL+LDEP S LD RE +
Sbjct: 111 KVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESL 170
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
++ + KE IT + V H+ + + +DRI V + GR+ G+P E++ N
Sbjct: 171 RMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYN 222
>sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN PEB1C
>gi|11277299|pir||A81366 ABC-type amino-acid transporter
ATP-binding protein Cj0922c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968359|emb|CAB73179.1|
(AL139076) ABC-type amino-acid transporter ATP-binding
protein [Campylobacter jejuni]
Length = 242
Score = 132 bits (328), Expect = 6e-30
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 18/238 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE++NV+ YG + L+++NL+VK+GE L IIGPSGSGKST +NGL S
Sbjct: 1 MIELKNVNKYYGTH--HVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVS---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRV-GLVFQNPDSQLFN----MTVLEEVAFALENLGVER 117
G V V+ L + E+ + +VFQ+ FN MTVL+ + A L +
Sbjct: 55 -SGEVVVNNLVLNHKNKIEICRKYCAMVFQH-----FNLYPHMTVLQNLTLAPMKLQKKS 108
Query: 118 EEMWRRIRWA-LKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
++ + LK+V L DK +P LSGG++QR+AIA L K ++ DEPTS LDP
Sbjct: 109 KKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDP 168
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL +++ ++ + T+++V H F E ADRI+ + G +V E P E F N
Sbjct: 169 ETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSN 226
>sp|P07655|PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB >gi|72455|pir||BVECZB
ABC-type phosphate transport system ATP-binding protein
pstB [validated] - Escherichia coli
>gi|42398|emb|CAA26509.1| (X02723) pstB gene product (aa
1-257) [Escherichia coli] >gi|147259|gb|AAA24381.1|
(K01992) peripheral membrane protein B [Escherichia
coli] >gi|290573|gb|AAA62076.1| (L10328) peripheral
membrane protein B [Escherichia coli]
>gi|1790162|gb|AAC76748.1| (AE000449) ATP-binding
component of high-affinity phosphate-specific transport
system [Escherichia coli K12]
Length = 257
Score = 131 bits (327), Expect = 7e-30
Identities = 79/236 (33%), Positives = 128/236 (53%), Gaps = 13/236 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I+V N++F YG K ++L+++NL++ K + IGPSG GKST T N +
Sbjct: 11 IQVRNLNFYYG--KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRA 68
Query: 64 EGNVFVDGLN--TREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLG-VEREEM 120
EG + +DG N T +A L +VG+VFQ P F M++ + +AF + + R +M
Sbjct: 69 EGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP--FPMSIYDNIAFGVRLFEKLSRADM 126
Query: 121 WRRIRWALKLVKLW----DKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
R++WAL LW DK + +LSGG++QRL IA + ++P+VL+LDEP S LDP
Sbjct: 127 DERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDP 186
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ + L+ L ++ T+++V HN +D G ++ +++F
Sbjct: 187 ISTGRIEELITELKQD--YTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLF 240
>pir||B70127 phosphate ABC transporter, ATP-binding protein (pstB) homolog -
Lyme disease spirochete >gi|2688112|gb|AAC66606.1|
(AE001132) phosphate ABC transporter, ATP-binding
protein (pstB) [Borrelia burgdorferi]
Length = 260
Score = 131 bits (327), Expect = 7e-30
Identities = 83/239 (34%), Positives = 132/239 (54%), Gaps = 13/239 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
IIE EN++ Y + KA L +N+ + K +IGPSG GKSTF TLN + +
Sbjct: 13 IIETENLNLFYTDFKA--LNKINMKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIK 70
Query: 63 FEGNVFVDGLN--TREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGV-EREE 119
EGNV +G N + + EL ++G+VFQ P+ F M++ + +++ + G ++++
Sbjct: 71 IEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP--FLMSIYDNISYGPKIHGTKDKKK 128
Query: 120 MWRRIRWALKLVKLW----DKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+ + +LK LW DK +LSGG++QRL IA L ++P V+++DEPTS LD
Sbjct: 129 LDEIVEQSLKKSALWNEVKDKLHTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALD 188
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
P+ ++ L+ +N +E TII+V HN +DR F G + E +E+F N
Sbjct: 189 PISTGKIEELI--INLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFN 245
>pir||A82376 amino acid ABC transporter, ATP-binding protein VC0008 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654399|gb|AAF93186.1| (AE004093) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 245
Score = 131 bits (327), Expect = 7e-30
Identities = 82/254 (32%), Positives = 153/254 (59%), Gaps = 21/254 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I+++N+ ++G S+ L+ ++L +++GE + IIG SG+GKST +N L
Sbjct: 1 MIKLQNIHKRFGTSEV--LKGIDLEIQRGEIVVIIGSSGTGKSTLLRCVNFLEQAD---- 54
Query: 63 FEGNVFVDGL--NTREHSVAE---LSTRVGLVFQNPDSQLFNMTVLEEVAFALENL-GVE 116
+G++ +D L +T++H+ A+ L + G VFQN + ++T + +A AL + G +
Sbjct: 55 -QGSIRIDELTVDTQKHTKADVLALRRKTGFVFQNY-ALFAHLTARQNIAEALITVRGWK 112
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ + +R + L + L DK + +P LSGG++QR+ I + ++P++L+ DEPTS LDP
Sbjct: 113 KAQAHQRAQQILDDIGLGDKGDSYPAALSGGQQQRVGIGRAMALQPELLLFDEPTSALDP 172
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
EVL+L++ L + + T+++V H F E ADR++ G++V +G P+++F++ +
Sbjct: 173 EWVGEVLALMKKLATQHQ-TMLVVTHEMQFAKEVADRVIFMAEGKIVEQGSPQDIFDHPQ 231
Query: 237 ------FLERIGIR 244
FL ++GIR
Sbjct: 232 DPRLRKFLNQVGIR 245
>pir||F64751 probable ABC-type transport protein b0262 - Escherichia coli
>gi|1552831|gb|AAB08683.1| (U70214) hypothetical
[Escherichia coli] >gi|1786457|gb|AAC73365.1| (AE000134)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 352
Score = 131 bits (326), Expect = 1e-29
Identities = 76/232 (32%), Positives = 135/232 (57%), Gaps = 12/232 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N +E+ NV+ ++G++ + ++NL + +G+ + ++GPSG GK+T + GL S
Sbjct: 9 NFVELRNVTKRFGSNTV--IDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPS--- 63
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
EG +F+DG + S+ + + +VFQ+ LF +M++ E V + L+ LGV R E+
Sbjct: 64 --EGQIFIDGEDVTHRSIQQRD--ICMVFQS--YALFPHMSLGENVGYGLKMLGVPRAEL 117
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R++ AL +V L + F +SGG++QR+A+A L++KPKVL+ DEP S LD R
Sbjct: 118 KARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRR 177
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ +R L K+ IT + V H+ +D ++V + G ++ G P++++
Sbjct: 178 SMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLY 229
>sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
Length = 348
Score = 131 bits (326), Expect = 1e-29
Identities = 76/232 (32%), Positives = 135/232 (57%), Gaps = 12/232 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N +E+ NV+ ++G++ + ++NL + +G+ + ++GPSG GK+T + GL S
Sbjct: 5 NFVELRNVTKRFGSNTV--IDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPS--- 59
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
EG +F+DG + S+ + + +VFQ+ LF +M++ E V + L+ LGV R E+
Sbjct: 60 --EGQIFIDGEDVTHRSIQQRD--ICMVFQS--YALFPHMSLGENVGYGLKMLGVPRAEL 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R++ AL +V L + F +SGG++QR+A+A L++KPKVL+ DEP S LD R
Sbjct: 114 KARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRR 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ +R L K+ IT + V H+ +D ++V + G ++ G P++++
Sbjct: 174 SMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLY 225
>pir||E69098 phosphate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622862|gb|AAB86201.1| (AE000929) phosphate
transport system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 253
Score = 131 bits (326), Expect = 1e-29
Identities = 82/236 (34%), Positives = 131/236 (54%), Gaps = 13/236 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
IEVE+++ + +A+ L+D+NL + K +IGPSG GKSTF TLN +
Sbjct: 7 IEVEDLNVYF--DEAHILKDINLKIPKNTVTALIGPSGCGKSTFIRTLNRMNDVISGFRH 64
Query: 64 EGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVE-REEM 120
EG+V++DG + + V EL +VG+VFQ P+ F ++ E VA+ L G + R+ +
Sbjct: 65 EGHVYLDGKDIYDPDMDVVELRKKVGMVFQKPNP--FPKSIFENVAYGLRVHGYDDRDFI 122
Query: 121 WRRIRWALKLVKLWD----KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
R+ +L+ LWD K ++ LSGG++QRL IA + ++P+V+++DEP S LDP
Sbjct: 123 EERVEESLRAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAIEPEVILMDEPCSALDP 182
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ ++ L+ L + TII+V HN + F G +V G E++F
Sbjct: 183 ISTTKIEDLIHKLKND--YTIIIVTHNMQQATRVSKYTAFFLHGEIVESGLTEQIF 236
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 131 bits (326), Expect = 1e-29
Identities = 88/232 (37%), Positives = 134/232 (56%), Gaps = 14/232 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
IE+ ++ ++G + L+ V+L+VK GE L ++GPSG GK+T + GL
Sbjct: 4 IELRDIIKRFGE---FELK-VSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPD----- 54
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
+G V+ DG + + + +GLVFQ D LF +MTV + VAF LE V R E+ +
Sbjct: 55 KGRVYFDGRDITD--LPPYERNIGLVFQ--DYALFPHMTVFKNVAFGLEVRRVPRMEIEK 110
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+R L LV L P LSGG++QR+A+A LV++P VL+LDEP S LD RE++
Sbjct: 111 RVREVLDLVGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKL 170
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
++ + KE IT I V H+ + + +DRI V + GR+ G+P +++ N
Sbjct: 171 RGEIKRIVKELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDLYYN 222
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 131 bits (326), Expect = 1e-29
Identities = 81/234 (34%), Positives = 138/234 (58%), Gaps = 14/234 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++++N YG+ + D+N + KKGEF+ ++GPSG GKST + GL IN
Sbjct: 1 MAYLKIKNFKKAYGDKIIFE--DINFSAKKGEFITLLGPSGCGKSTLLRCIAGL--SQIN 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTR-VGLVFQNPDSQLF-NMTVLEEVAFALENLGVERE 118
G G + LN ++ + R +G+VFQN LF N+ V E VAF L+ ++++
Sbjct: 57 G---GKI---SLNDKDLTKLSPQKRNIGMVFQN--YALFPNLNVFENVAFGLKIKKMDKK 108
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
++ +R++ LKLV+L + + +P LSGG+ QR+A+A LV+KP +L+LDEP S LD
Sbjct: 109 DIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKI 168
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
R+ + ++ + KE ++T I V H+ + LE +D I++ + G+++ ++
Sbjct: 169 RKYLRVQIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNLY 222
>gi|11498955 phosphate ABC transporter, ATP-binding protein (pstB)
[Archaeoglobus fulgidus] >gi|7442554|pir||F69419
phosphate ABC transporter, ATP-binding protein (pstB)
homolog - Archaeoglobus fulgidus
>gi|2649216|gb|AAB89887.1| (AE001010) phosphate ABC
transporter, ATP-binding protein (pstB) [Archaeoglobus
fulgidus]
Length = 251
Score = 131 bits (325), Expect = 1e-29
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 13/239 (5%)
Query: 5 EVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFE 64
++ N S YGN +R+VNL + + + IIGPSG GKST +LN LI E
Sbjct: 6 DIRNFSVYYGNK--VGIRNVNLEIYRNKVTAIIGPSGCGKSTLLRSLNRLIELVDGVRIE 63
Query: 65 GNVFVDGLNTREHSV--AELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
G V DG N + V EL R+G+VFQ+P+ F ++ + VA+ G++ +E +
Sbjct: 64 GEVIFDGKNIYDDGVDAVELRRRIGMVFQHPNP--FPKSIFDNVAYGPRVHGIKDKERLK 121
Query: 123 RI-RWALKLVKLWD----KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
I +LK LWD + + LSGG++QRL IA + P+V++ DEPTS LDP+
Sbjct: 122 EIVEESLKKAALWDEVKDRLSDSALGLSGGQQQRLCIARAIATNPEVILFDEPTSALDPI 181
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
++ L+ L K T+++V HN +D + F G +V GK +VFE E
Sbjct: 182 AAAKIEELMVELKK--NYTVVVVTHNIQQAARISDYVAFFWMGELVEYGKTAKVFEKPE 238
>pir||E81936 probable amino acid permease ATP-binding protein NMA0900 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379613|emb|CAB84178.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 242
Score = 131 bits (325), Expect = 1e-29
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 18/221 (8%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHS-- 78
+ VNL +KKGE + + GPSGSGKST T+N L SI G ++VDG+N +
Sbjct: 17 INGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQL--ESIES---GEIWVDGVNVADPKTD 71
Query: 79 VAELSTRVGLVFQNPDSQLFNM----TVLEEVAFA-LENLGVEREEMWRRIRWALKLVKL 133
+ ++ VG VFQ+ FN+ TVLE + A ++ G E+ ++ L+ V L
Sbjct: 72 LNKIREEVGFVFQS-----FNLYPHLTVLENITLAPMKVKGQNAEQAEKKAMELLERVGL 126
Query: 134 WDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEE 193
K++ FP LSGG++QR+AIA L M+P+V++ DEPTS LDP EVL +++ L E
Sbjct: 127 AHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMKDL-AES 185
Query: 194 KITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+T++ V H F E ADR++ D G+++ + PE F N
Sbjct: 186 GMTMMCVTHEMGFAREVADRVIFVDKGQILEDETPEAFFTN 226
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 131 bits (325), Expect = 1e-29
Identities = 79/232 (34%), Positives = 134/232 (57%), Gaps = 10/232 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M I V+N+S + + KA L ++NL+V++GEFL I+GPSG GKST + GL
Sbjct: 1 MGEISVKNISKSWADFKA--LNNINLDVREGEFLSILGPSGCGKSTLLRIIAGL-----E 53
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
+G++ + G V + ++G VFQN + ++TV + VA LE ++E+
Sbjct: 54 SPTDGDIVIAGKQVTNDPVWK--RKIGFVFQN-FALWPHLTVFKNVAMGLELRKTPKDEL 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ AL++V+L + P LSGG++QR+A+A +V+KP VL+LDEP S LD R+
Sbjct: 111 QQRVTKALRMVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQ 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
++ ++ L + +T + V H+ + L +DR+VV + G + P+ ++
Sbjct: 171 DMQVELKALQRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNIY 222
>gb|AAB01532.1| (U38418) ProV [Bacillus subtilis]
Length = 404
Score = 130 bits (324), Expect = 2e-29
Identities = 83/238 (34%), Positives = 129/238 (53%), Gaps = 16/238 (6%)
Query: 6 VENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEG 65
+EN+ G KA + +VNL + KGEF+ IGPSG GK+T +N LI S G
Sbjct: 9 LENIK---GGKKA--VNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSA-----G 58
Query: 66 NVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRI 124
+F+DG N E EL ++G VFQ LF +MT+ + ++ + L + R
Sbjct: 59 KIFIDGENIMEQDPEELRRKIGYVFQQIG--LFPHMTIQQNISLVPKLLKWPEQHRKERA 116
Query: 125 RWALKLVKLWDKR-EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
R LKLV + + + +P LSGG++QR+ + L +P ++++DEP LDP+ R+ +
Sbjct: 117 RELLKLVDMGPEYLDRYPHELSGGQQQRIGVLRALAREPPLILMDEPFGALDPITRDSLQ 176
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--EFLE 239
+ L K TI+ V H+ D ++ ADRIV+ G +V G P+++ N EF+E
Sbjct: 177 EEFKKLQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVE 234
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 130 bits (324), Expect = 2e-29
Identities = 81/232 (34%), Positives = 134/232 (56%), Gaps = 12/232 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+ ++NVS + + + L++V+L++KKGEF I+GPSG GK+T + G G
Sbjct: 6 VSIKNVSKFFDDFQV--LKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGF-----EGVE 58
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWR 122
G+V +DG + ++ V ++FQN LF ++TV E +AF L+ + E+ +
Sbjct: 59 SGDVLLDGKSIL--NLPPNKRPVNIIFQN--YALFPHLTVFENIAFPLKLKKLSENEINQ 114
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ L L+++ + ++ P LSGG+KQR+AIA L +P+VL+LDEP S LD R+E+
Sbjct: 115 RVNELLSLIRMEEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQEL 174
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
L + L+ IT I V H+ + +DR+ + + G +V G P EV+E+
Sbjct: 175 LVELDNLHDRVGITFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEVYES 226
>pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0696 [imported]
- Neisseria meningitidis (group B strain MD58)
>gi|7225924|gb|AAF41113.1| (AE002424) amino acid ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 242
Score = 130 bits (324), Expect = 2e-29
Identities = 86/221 (38%), Positives = 127/221 (56%), Gaps = 18/221 (8%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHS-- 78
+ VNL +KKGE + + GPSGSGKST T+N L SI G ++VDG+N +
Sbjct: 17 INGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQL--ESIES---GEIWVDGVNVADPKTD 71
Query: 79 VAELSTRVGLVFQNPDSQLFNM----TVLEEVAFA-LENLGVEREEMWRRIRWALKLVKL 133
+ ++ VG VFQ FN+ TVLE + A ++ G E+ ++ L+ V L
Sbjct: 72 LNKIREEVGFVFQG-----FNLYPHLTVLENITLAPMKVKGQNAEQAEKKAMELLERVGL 126
Query: 134 WDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEE 193
K++ FP LSGG++QR+AIA L M+P+V++ DEPTS LDP EVL +++ L E
Sbjct: 127 AHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMKDL-AES 185
Query: 194 KITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+T++ V H F E ADR++ D G+++ + PE F N
Sbjct: 186 GMTMMCVTHEMGFAREVADRVIFVDKGQILEDETPEAFFTN 226
>sp|P46341|YQGJ_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YQGJ
>gi|7442551|pir||D69956 phosphate ABC transporter
(ATP-binding pro) homolog yqgJ - Bacillus subtilis
>gi|903306|dbj|BAA09584.1| (D58414) ORF74 [Bacillus
subtilis] >gi|1303857|dbj|BAA12513.1| (D84432) YqgJ
[Bacillus subtilis] >gi|2634929|emb|CAB14426.1| (Z99116)
alternate gene name: yzmE~similar to phosphate ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 269
Score = 130 bits (323), Expect = 2e-29
Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+++EV+++S YGN +A + VN++++K +IGPSG GKSTF +N + +
Sbjct: 21 HVLEVKDLSIYYGNKQA--VHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIPSA 78
Query: 62 EFEGNVFVDGLNTREHSVAELSTR--VGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
EG + +GLN ++ +S R +G+VFQ P+ F ++ + AL+ G +
Sbjct: 79 RAEGEILYEGLNILGGNINVVSLRREIGMVFQKPNP--FPKSIYANITHALKYAGERNKA 136
Query: 120 MWRRI-RWALKLVKLWDKREE----FPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
+ I +L LWD+ ++ +LSGG++QRL IA L MKP VL+LDEP S L
Sbjct: 137 VLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASAL 196
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
DP+ ++ L+ L +E +II+V HN L +DR F G +V G+ E++F
Sbjct: 197 DPISNAKIEELITGLKRE--YSIIIVTHNMQQALRVSDRTAFFLNGELVEYGQTEQIF 252
>sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TRANSPORT ATP-BINDING
PROTEIN BZTD >gi|7442514|pir||S77604
glutamate/glutamine/aspartate/asparagine transport
protein - Rhodobacter capsulatus
>gi|1655715|gb|AAB17889.1| (U37407) BztD [Rhodobacter
capsulatus]
Length = 263
Score = 130 bits (323), Expect = 2e-29
Identities = 84/235 (35%), Positives = 135/235 (56%), Gaps = 14/235 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I++ ++ YG + + LRD+NL V +GE + I GPSGSGKST +N L H
Sbjct: 23 IQISQMNKWYG--QFHVLRDINLTVHRGERIVIAGPSGSGKSTMIRCINRLEEHQ----- 75
Query: 64 EGNVFVDGLNTREH--SVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVEREE 119
G + VDG+ ++ ++ + VG+VFQ+ LF ++T+LE + A + V + E
Sbjct: 76 SGKIIVDGIELTSDLKNIDKVRSEVGMVFQH--FNLFPHLTILENLTLAPIWVRKVPKRE 133
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
+ L+ VK+ ++ +++P LSGG++QR+AIA L MKPK+++ DEPTS LDP
Sbjct: 134 AEETAMYYLEKVKIPEQAQKYPGQLSGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMI 193
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL + L EE +T++ V H F A+R++ G++V + P + F N
Sbjct: 194 KEVLDTMIQL-AEEGMTMLCVTHEMGFAQAVANRVIFMADGQIVEQNNPHDFFHN 247
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 130 bits (323), Expect = 2e-29
Identities = 84/235 (35%), Positives = 137/235 (57%), Gaps = 18/235 (7%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I +E V ++G K ++ V+L++K GEF ++GPSG GK+T + GL E+
Sbjct: 17 IRLEGVVKRFG--KVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGL-------EY 67
Query: 64 --EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFAL----ENLGVER 117
EG + +DG + + + V +VFQN + +M+V + +AF L + +G+ +
Sbjct: 68 PDEGRILIDGEDVTFKDPKDRN--VAMVFQNY-ALYPHMSVFDNIAFTLHLRRKEMGLTK 124
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+++ RR+ KL+++ D + P LSGG++QR+A+A LV +PKV ++DEP S LD L
Sbjct: 125 DDIRRRVIEVAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDAL 184
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
R + + ++ L K+ KIT + V H+ + ADRI V + GRVV G PEEV+
Sbjct: 185 LRLAMRAELKKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEVY 239
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 129 bits (322), Expect = 3e-29
Identities = 87/238 (36%), Positives = 139/238 (57%), Gaps = 18/238 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I++++++ YG + + L+++NLNVKKGE + I GPSGSGKST +N L H
Sbjct: 10 MIQIKDMNKWYG--EFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQ---- 63
Query: 63 FEGNVFVDGLNTREH--SVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
+G + V G E ++ + VG+ FQ+ LF ++TVLE A + V++
Sbjct: 64 -KGQIIVAGNELTEDLKNIELVRREVGMCFQH--FNLFPHLTVLENCTLA--PIWVKKMP 118
Query: 120 MWRRIRWALKL---VKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ A+K V++ ++ +++P LSGG++QR+AIA L M P++++ DEPTS LDP
Sbjct: 119 KDKAEEIAMKYLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDP 178
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
EVL ++ L EE +T++ V H F E ADR++ D G ++ E P+E FEN
Sbjct: 179 EMVREVLDVMVEL-AEEGMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFEN 235
>gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 314
Score = 129 bits (321), Expect = 4e-29
Identities = 83/232 (35%), Positives = 130/232 (55%), Gaps = 10/232 (4%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I ++ V+ +G+ K + ++LNV+KGEF I+G SGSGK+T + GL S
Sbjct: 1 MITLKEVTKFFGSFKV--IDSISLNVEKGEFFVILGKSGSGKTTLLRLIAGLEKVSSGKI 58
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
N V L + + G+VFQ+ + N V E + ALEN + +++
Sbjct: 59 LISNEDVTDLPPSKRDI-------GMVFQSY-ALYPNKKVFENLMIALENSEINKKDKEE 110
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
RI K ++++ +++P LSGG++QR+AIA LV +PKVL++DEP S LD R
Sbjct: 111 RIIEISKQLEIYHLMDKYPAQLSGGQQQRVAIAKALVKRPKVLLMDEPLSNLDVQLRYSA 170
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
L++ + KE IT I V H+++ L ADRI V D GR++ G PE+++ N
Sbjct: 171 RKLIKKVQKEFNITTIYVTHDSNEALAIADRIGVIDKGRLLQVGIPEDIYNN 222
>pir||A72401 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980721|gb|AAD35314.1|AE001707_1 (AE001707)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 266
Score = 129 bits (321), Expect = 4e-29
Identities = 95/272 (34%), Positives = 150/272 (54%), Gaps = 29/272 (10%)
Query: 4 IEVENVSFKYGNS---KAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
IEV NVS + + +L +V+L + +GE L + G +GSGKST + GLI +
Sbjct: 3 IEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPT-- 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G+V DG + + E+ +G+ FQ P+ Q F V +EVAFA++N +R+ +
Sbjct: 61 ---SGDVLYDGERKKGY---EIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPV 114
Query: 121 WRRIRWALKLVKL-WDK-REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
++ A++ V L +D ++ P LSGGEK+R+AIASV+V +P +L+LDEP LD G
Sbjct: 115 -PLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREG 173
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
+ ++L +V K T+IL+ H+ + ++ H DR+VV + G+ V +G +EFL
Sbjct: 174 KTDLLRIVEKWKTLGK-TVILISHDIETVINHVDRVVVLEKGKKVFDG------TRMEFL 226
Query: 239 ERIGIRIPTRVKIGYELKKRGITRRAVLSYEE 270
E+ R T K + RR VL E+
Sbjct: 227 EKYDPRFFT--------SKMLVMRRLVLKGED 250
>pir||C48518 ABC-type transport protein (PEB1 5' region) - Campylobacter jejuni
>gi|388564|gb|AAA02918.1| (L13662) major cell-binding
factor receptor [Campylobacter jejuni]
Length = 242
Score = 129 bits (320), Expect = 5e-29
Identities = 90/238 (37%), Positives = 131/238 (54%), Gaps = 18/238 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE++NV+ YG + L+ NL+VK+GE L IIGPSGSGKST +NGL S
Sbjct: 1 MIELKNVNKYYGTH--HVLKIFNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVS---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRV-GLVFQNPDSQLFN----MTVLEEVAFALENLGVER 117
G V V+ L + E+ + +VFQ+ FN MTVL+ + A L +
Sbjct: 55 -SGEVVVNNLVLNHKNKIEICRKYCAMVFQH-----FNLYPHMTVLQNLTLAPMKLQKKS 108
Query: 118 EEMWRRIRWA-LKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
++ + LK+V L DK +P LSGG++QR+AIA L K ++ DEPTS LDP
Sbjct: 109 KKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDP 168
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL +++ ++ + T+++V H F E ADRI+ + G +V E P E F N
Sbjct: 169 ETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSN 226
>sp|P41076|GLTL_ECOLI GLUTAMATE/ASPARTATE TRANSPORT ATP-BINDING PROTEIN GLTL
>gi|7442516|pir||B64800 glutamate/aspartate transport
protein gltL - Escherichia coli
>gi|624632|gb|AAA60982.1| (U10981) GltL [Escherichia
coli] >gi|1651271|dbj|BAA35304.1| (D90705)
Glutamate/aspartate transport atp-binding protein gltL.
[Escherichia coli] >gi|1778570|gb|AAB40853.1| (U82598)
glutamate/aspartate transport ATP-binding protein
[Escherichia coli] >gi|1786872|gb|AAC73753.1| (AE000169)
ATP-binding protein of glutamate/aspartate transport
system [Escherichia coli K12]
Length = 241
Score = 129 bits (320), Expect = 5e-29
Identities = 92/237 (38%), Positives = 145/237 (60%), Gaps = 21/237 (8%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I ++NVS YG+ + L D + VKKGE + + GPSGSGKST T+NGL P
Sbjct: 1 MITLKNVSKWYGHFQV--LTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQ---- 54
Query: 63 FEGNVFVDGL--NTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
+G + VDG+ N ++ +A+L +RVG+VFQ+ +LF +++++E + A + ++R++
Sbjct: 55 -QGEITVDGIVVNDKKTDLAKLRSRVGMVFQH--FELFPHLSIIENLTLAQVKV-LKRDK 110
Query: 120 MWRRIRWALKLVK---LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
R + ALKL++ L +FP LSGG++QR+AIA L M P ++ DEPTS LDP
Sbjct: 111 APAREK-ALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDP 169
Query: 177 LGREEVLS-LVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
EVL +V L N E +T+++V H F + A+R++ D G++V E P++ F
Sbjct: 170 EMINEVLDVMVELAN--EGMTMMVVTHEMGFARKVANRVIFMDEGKIV-EDSPKDAF 223
>sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING PROTEIN AAPP
>gi|1154897|emb|CAA57936.1| (X82596) general amino acid
ABC type transporter [Rhizobium leguminosarum]
Length = 257
Score = 129 bits (320), Expect = 5e-29
Identities = 86/235 (36%), Positives = 135/235 (56%), Gaps = 14/235 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+E+ N++ YG+ + LRD+NL V +GE + I GPSGSGKST +N L H
Sbjct: 18 VEIVNMNKWYGDF--HVLRDINLKVMRGERIVIAGPSGSGKSTMIRCINRLEEHQ----- 70
Query: 64 EGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVEREE 119
+G + VDG L + E+ VG+VFQ+ LF ++T+LE A + + +++
Sbjct: 71 KGKIVVDGTELTNDLKKIDEVRREVGMVFQH--FNLFPHLTILENCTLAPIWVRKMPKKQ 128
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
LK VK+ ++ ++P LSGG++QR+AIA L M PK+++ DEPTS LDP
Sbjct: 129 AEEVAMHFLKRVKIPEQANKYPGQLSGGQQQRVAIARSLCMNPKIMLFDEPTSALDPEMI 188
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+EVL + L EE +T++ V H F + A+R++ D G++V + +P F+N
Sbjct: 189 KEVLDTMVGL-AEEGMTMLCVTHEMGFARQVANRVIFMDQGQIVEQNEPAAFFDN 242
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 129 bits (320), Expect = 5e-29
Identities = 80/235 (34%), Positives = 135/235 (57%), Gaps = 13/235 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+II + NVS ++G+ A L+D+NL V G+ + ++GPSGSGKST + GL
Sbjct: 1 MSII-INNVSKQFGDFTA--LKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPD-- 55
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
+G + ++G + + + + +G VFQ+ LF ++T+ + +AF LE +
Sbjct: 56 ---QGQIIINGQDATHVDIRKRN--IGFVFQH--YALFKHLTIRQNIAFGLEIRKHPPAK 108
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
R+ L L++L +P LSGG++QR+A+A L ++P+VL+LDEP LD R
Sbjct: 109 TKERVEELLSLIQLEGLGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVR 168
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+E+ + +R L+ E +T + V H+ + +E AD IVV G++ G EE++E+
Sbjct: 169 KELRAWLRKLHDEVHLTSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEIYEH 223
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 129 bits (320), Expect = 5e-29
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 16/234 (6%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
I+E++N+S Y N+ +L ++NL +KK EF+ ++GPSG GK+T L G + NGE
Sbjct: 5 ILEIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQK-NGE 63
Query: 63 ---FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVERE 118
F + N RE + VFQN LF +M V + ++F L ++
Sbjct: 64 IYFFSKEISKTSPNKRE---------INTVFQN--YALFPHMNVFDNISFGLRMKKTPKD 112
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
+ +++ +L L+ + LSGG+KQR+AIA +VM+PK+L+LDEP S LD
Sbjct: 113 IIKEKVKTSLSLIGMPKYAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKM 172
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
R+E+ ++ + ++ IT I V H+ + L +DRIVV + G ++ G PEE++
Sbjct: 173 RQEMQKELKKIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEIY 226
>pir||T43868 phosphate transport system peripheral membrane protein B [imported]
- Pseudomonas putida >gi|4519572|dbj|BAA75657.1|
(AB017356) peripheral membrane protein B [Pseudomonas
putida]
Length = 277
Score = 129 bits (320), Expect = 5e-29
Identities = 86/238 (36%), Positives = 126/238 (52%), Gaps = 13/238 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
IEV +S YG+ +A L DV++N+ K IGPSG GKST T N +
Sbjct: 31 IEVPGLSLFYGDKQA--LFDVSMNIPKQRVTAFIGPSGCGKSTLLRTFNRMNDLVDGCRV 88
Query: 64 EG--NVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
EG N++ + + + VAEL RVG+VFQ P+ F T+ E V + L G+ ++ +
Sbjct: 89 EGAINLYGNNIYRKGEDVAELRRRVGMVFQKPNP--FPKTIYENVVYGLRIQGINKKRVL 146
Query: 122 -RRIRWALKLVKLWD----KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ WALK LWD + E LSGG++QRL IA + ++P+VL+LDEP S LDP
Sbjct: 147 DEAVEWALKGAALWDEVKDRLHESALGLSGGQQQRLVIARTIAVEPEVLLLDEPCSALDP 206
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ +V L+ L + K TI++V HN +D G++V G + +F N
Sbjct: 207 ISTLKVEELIYEL--KSKYTIVIVTHNMQQAARVSDYTAFMYLGKLVEFGDTDTLFTN 262
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 129 bits (320), Expect = 5e-29
Identities = 86/238 (36%), Positives = 133/238 (55%), Gaps = 20/238 (8%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
IE+ NVS + KA L D+NL+++ GE + ++GPSG GK+T + GL
Sbjct: 3 IEIRNVSKNFNAFKA--LDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDA---- 56
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFAL------ENLGVE 116
GN+ G + +H V + + VG VFQ+ LF +MTV + VAF L E G
Sbjct: 57 -GNIVFHGEDVSQHDVRDRN--VGFVFQH--YALFRHMTVFDNVAFGLRMKPKGERPG-- 109
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ ++ L +V+L + +P LSGG++QR+A+A L ++PK+L+LDEP LD
Sbjct: 110 ESAIKAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDA 169
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
R+E+ + L++E +T + V H+ + +E ADRIVV + G + G P EV+EN
Sbjct: 170 KVRKELRRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYEN 227
>pir||H72275 phosphate ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981816|gb|AAD36335.1|AE001781_6 (AE001781)
phosphate ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 251
Score = 128 bits (319), Expect = 6e-29
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 13/238 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
IIE+EN S YG A +++V + + K + IIGPSG GK+T ++N + H
Sbjct: 4 IIEIENFSAYYGEKIA--VKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHLPGFR 61
Query: 63 FEGNVFVDGLNTREHS--VAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
EG ++ G + + V E RVG+VFQ P F M++ + VAF GV+ + +
Sbjct: 62 VEGKIYFKGQDIYDPQLDVTEYRKRVGMVFQKPTP--FPMSIYDNVAFGPRIHGVKSKHI 119
Query: 121 WRRI-RWALKLVKLWDKRE----EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
RI +LK LWD+ + + LSGG++QRL IA L ++P+V++LDEPTS LD
Sbjct: 120 LDRIVEESLKKAALWDEVKSELNKSGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALD 179
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
P+ + + L+ L+ E TI++V HN + AD I G ++ G E+ E
Sbjct: 180 PIATQRIEKLLEELS--ENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVE 235
>pir||E83001 probable ATP-binding component of ABC transporter PA5152 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951453|gb|AAG08537.1|AE004928_3 (AE004928) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 257
Score = 128 bits (319), Expect = 6e-29
Identities = 89/250 (35%), Positives = 131/250 (51%), Gaps = 33/250 (13%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSINGE 62
+E+ N+ +YG+ + L+ ++L + G+ + I+G SGSGKSTF +N L PH
Sbjct: 8 LEIRNLHKRYGDLEV--LKGISLTARDGDVISILGSSGSGKSTFLRCINLLENPH----- 60
Query: 63 FEGNVFVDGLNTR-------------EHSVAELSTRVGLVFQNPDSQLFN----MTVLEE 105
+G + V G R + L + +G VFQN FN M++L+
Sbjct: 61 -QGQILVSGEELRLKKSKNGDLVAADSQQINRLRSELGFVFQN-----FNLWPHMSILDN 114
Query: 106 VAFALEN-LGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKV 164
V A LG + E L V + DKR +P LSGG++QR AIA L M+PKV
Sbjct: 115 VIEAPRRVLGKSKAEAIEIAEGLLAKVGIADKRHSYPAQLSGGQQQRAAIARTLAMQPKV 174
Query: 165 LVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVM 224
++ DEPTS LDP +EVL+++R L EE T++LV H F + + +V G V
Sbjct: 175 ILFDEPTSALDPEMVQEVLNVIRAL-AEEGRTMLLVTHEMSFARQVSSEVVFLHQGLVEE 233
Query: 225 EGKPEEVFEN 234
+G P++VFEN
Sbjct: 234 QGTPQQVFEN 243
>sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72466|pir||QREBVT glycine betaine/proline transport
protein proV - Salmonella typhimurium
>gi|47831|emb|CAA36921.1| (X52693) proV protein (AA
1-400) [Salmonella typhimurium]
Length = 400
Score = 128 bits (318), Expect = 8e-29
Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 10/218 (4%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
++D +L +++GE I+G SGSGKST LN LI + G V +DG++ + S A
Sbjct: 44 VKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT-----RGQVLIDGVDIAKISDA 98
Query: 81 ELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDK 136
EL ++ +VFQ+ + + +MTVL+ AF +E G+ +E + AL+ V L +
Sbjct: 99 ELREVRRKKIAMVFQS-FALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQVGLENY 157
Query: 137 REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKIT 196
R +P LSGG +QR+ +A L + P +L++DE S LDPL R E+ + L + + T
Sbjct: 158 RHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRT 217
Query: 197 IILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
I+ + H+ D + DRI + G VV G P+E+ N
Sbjct: 218 IVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 128 bits (318), Expect = 8e-29
Identities = 83/226 (36%), Positives = 129/226 (56%), Gaps = 14/226 (6%)
Query: 14 GNSKAYSLRDV----NLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFV 69
G SK++ +++ NL+V GEFL I+GPSG GK+T + G +G + +
Sbjct: 22 GISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETAD-----QGQILL 76
Query: 70 DGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWAL 128
D + + V V VFQ+ LF +MTV E VAF L V + E+ R+ AL
Sbjct: 77 DDQDVTQ--VPAEQRHVNTVFQS--YALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEAL 132
Query: 129 KLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRL 188
++V+L + + P LSGG++QR+AIA +V KPKVL+LDE S LD R+++ S ++
Sbjct: 133 RMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQ 192
Query: 189 LNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
L ++ IT I V H+ + L +DRI+V G++ +G P E++E+
Sbjct: 193 LQRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYED 238
>sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72467|pir||BVECPV glycine betaine/L-proline
transport ATP-binding protein proV - Escherichia coli
>gi|147373|gb|AAA24427.1| (M24856) proV peptide
[Escherichia coli] >gi|1789032|gb|AAC75724.1| (AE000352)
ATP-binding component of transport system for glycine,
betaine and proline [Escherichia coli K12]
>gi|1800065|dbj|BAA16542.1| (D90891) GLYCINE
BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV.
[Escherichia coli]
Length = 400
Score = 127 bits (317), Expect = 1e-28
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 10/218 (4%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
++D +L +++GE I+G SGSGKST LN LI + G V +DG++ + S A
Sbjct: 44 VKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT-----RGQVLIDGVDIAKISDA 98
Query: 81 ELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDK 136
EL ++ +VFQ+ + + +MTVL+ AF +E G+ EE + AL+ V L +
Sbjct: 99 ELREVRRKKIAMVFQS-FALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENY 157
Query: 137 REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKIT 196
+P LSGG +QR+ +A L + P +L++DE S LDPL R E+ + L + + T
Sbjct: 158 AHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRT 217
Query: 197 IILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
I+ + H+ D + DRI + G VV G P+E+ N
Sbjct: 218 IVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255
>sp|Q50293|Y180_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG180 HOMOLOG
(GT9_ORF303) >gi|2127613|pir||S62814 histidine transport
ATP-binding protein hisP - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|2146154|pir||S73963 histidine transport
ATP-binding protein hisP - Mycoplasma pneumoniae (SGC3)
(ATCC 29342) >gi|1215694|gb|AAC43687.1| (U34795) GlnQ
[Mycoplasma pneumoniae] >gi|1674342|gb|AAB96285.1|
(AE000061) cobalt transport ATP-binding protein
[Mycoplasma pneumoniae]
Length = 303
Score = 127 bits (317), Expect = 1e-28
Identities = 79/253 (31%), Positives = 135/253 (53%), Gaps = 5/253 (1%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVN---LNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
I+ V N+S + + ++ ++ K + IIG SGSGKST NGLI +
Sbjct: 16 ILSVSNLSCFFNEKTVHEVKVIDNFSYTFAKNKVYCIIGDSGSGKSTLVNHFNGLIKPAY 75
Query: 60 NGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
+ ++++ + L + +VFQ P+ QLF TV +++ F LG + E
Sbjct: 76 GDIWVKDIYIGQKQRKIKDFKRLRKTISIVFQFPEYQLFKDTVEKDIMFGPIALGQSKNE 135
Query: 120 MWRRIRWALKLVKL-WDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
++ + L+ + L + E P LSGG+K+R+AIA +L ++P+VL+ DEPT+ LDP G
Sbjct: 136 ARQKAAYYLEKMGLKYTFLERNPFELSGGQKRRVAIAGILAIEPEVLIFDEPTAGLDPEG 195
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
E++ L++ K T+ ++ H + +LE AD ++V G++V G P EVF + FL
Sbjct: 196 EREMMRLIKDA-KASGRTVFMITHQMENVLEVADEVLVLSKGQLVKSGDPYEVFMDEAFL 254
Query: 239 ERIGIRIPTRVKI 251
I +P +++
Sbjct: 255 AHTTIIMPPVIQV 267
>pir||D69068 methyl coenzyme M reductase system, component A2 homolog -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621192|gb|AAB84657.1| (AE000803) methyl coenzyme M
reductase system, component A2 homolog [Methanobacterium
thermoautotrophicum]
Length = 590
Score = 127 bits (317), Expect = 1e-28
Identities = 96/281 (34%), Positives = 145/281 (51%), Gaps = 23/281 (8%)
Query: 3 IIEVENVS--FKYGNSKAY-SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
+I VEN++ +K N + +L DVNL V +GE LGI+G SGSGK+T L G+ P
Sbjct: 23 MIRVENLTKTYKLENGDEFRALSDVNLEVAEGEILGILGMSGSGKTTLLRILRGVEPFDS 82
Query: 60 NGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFAL--------- 110
+V V+ ++ ++ ++L + + Q L+ T LE V L
Sbjct: 83 GRITLDDVTVEA-DSSQYYFSKLKKKTAIHLQRSFG-LWAETALENVIRKLYATRYGDES 140
Query: 111 -ENLGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDE 169
+ +E L++V L K + F P LSGGEKQRL +A L KP+VL+LDE
Sbjct: 141 MTDFDYASDEFGEDAMELLRVVGLEHKADHFAPVLSGGEKQRLIMARQLAKKPRVLLLDE 200
Query: 170 PTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPE 229
P + P ++E+L ++ +N+E +T++LV H + ADR+V+ DGGR+V EG+P
Sbjct: 201 PATMSCPRTKQEILDAIKNINRELGVTVVLVSHLPEVHEYLADRVVLMDGGRIVDEGEPS 260
Query: 230 EVFENVEFLERIGIRIPTRVKIGYE----LKKRGITRRAVL 266
+ FLE I P G L+ RG+ +R VL
Sbjct: 261 SIIG--RFLE--DIEPPVEYTPGARGKEILRVRGLGKRFVL 297
Score = 102 bits (253), Expect = 4e-21
Identities = 85/288 (29%), Positives = 131/288 (44%), Gaps = 62/288 (21%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSINGEFEGNVFVDGLNTREHSV 79
+ DVNL++ +GE + IIGPSG+GK+ + GL +P EF N + +N E V
Sbjct: 306 MSDVNLDIAEGEMVSIIGPSGAGKTVLLRMIGGLDLPDEGTVEFRLNS--EWVNMHEPGV 363
Query: 80 AELSTRVGLVFQNPDSQLFN-MTVLEEVAFAL---------------ENLGV-------- 115
+ R + F + + L + T+ ++A L + LG+
Sbjct: 364 KRMGIRRKMGFMHQEFALVHHATIRSQIASRLGVKGEHVVAEAKKRADELGISDMVLDVL 423
Query: 116 -------EREEMWRRIRWALKLVKLWDKREEFPPN------------------------- 143
E E +R + L L + FP +
Sbjct: 424 YQLTDLPETEARYRLEKLGLSPEILEELFPSFPDSEVKRYAEPIFRALDLPLSILDRRSY 483
Query: 144 -LSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEH 202
LSGGE+ R +A VL +P VL+LDEP LDP+ V + ++ +N E TII+V H
Sbjct: 484 ELSGGERVRATLALVLASRPDVLILDEPFGDLDPITLRMVSNSLKRINMEFGTTIIMVSH 543
Query: 203 NTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVK 250
+ DF+ E + R V+ + GR+VM+G+P E+ + EF+ER R RVK
Sbjct: 544 HVDFIRELSTRAVMVEDGRIVMDGEPGELCD--EFVERSHARYLQRVK 589
>gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. alfalfae]
Length = 254
Score = 127 bits (317), Expect = 1e-28
Identities = 87/245 (35%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
II+++ V+ YG + + L+D+NLNVK+GE + + GPSGSGKST LN L H
Sbjct: 14 IIQMQGVNKWYG--QFHVLKDINLNVKQGERIVLCGPSGSGKSTTIRCLNRLEEHQ---- 67
Query: 63 FEGNVFVDGLNTREH--SVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
+G + VDG+ + + VG+VFQ+ LF ++T+L+ A
Sbjct: 68 -QGRIVVDGVELTNDLKQIEAIRREVGMVFQH--FNLFPHLTILQNCTLA---------P 115
Query: 120 MWRR----------IRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDE 169
MW R L+ V++ ++ +FP LSGG++QR+AIA L MKPK+++ DE
Sbjct: 116 MWVRKMPKRKAEEIAMHYLERVRIPEQAHKFPGQLSGGQQQRVAIARALCMKPKIMLFDE 175
Query: 170 PTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPE 229
PTS LDP +EVL + L E+ +T++ V H F A+R++ D G +V + P
Sbjct: 176 PTSALDPEMVKEVLDTMIGL-AEDGMTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPN 234
Query: 230 EVFEN 234
+ F+N
Sbjct: 235 DFFDN 239
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 127 bits (317), Expect = 1e-28
Identities = 81/236 (34%), Positives = 130/236 (54%), Gaps = 18/236 (7%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+ + VE + YG + + RD++ +GEF+ ++GPSG GKST + GL
Sbjct: 1 MSFVSVEQLDKSYGATSIF--RDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVD-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTR---VGLVFQNPDSQLF-NMTVLEEVAFALENLGVE 116
G + +DG V L + + +VFQ+ LF NMTV + VAF L V
Sbjct: 57 ---SGRILIDG-----EDVVPLPPQKRGIAMVFQS--YALFPNMTVQQNVAFGLRMQKVP 106
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
E+ +R+ A++LV+L + +P LSGG+ QR+A+A LV +P++L+LDEP S LD
Sbjct: 107 AAELKQRVAEAIELVELGEYAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDA 166
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
R+ + +R + +E +T + V H+ + L +DRIV+ + GR+V G E ++
Sbjct: 167 RIRKHLREQIRRIQQELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETLY 222
>dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-binding protein in
thrW-argF intergenic region. [Escherichia coli]
Length = 348
Score = 127 bits (316), Expect = 1e-28
Identities = 75/232 (32%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N +E+ NV+ ++G++ + ++NL + +G+ + ++GPSG GK+T + GL S
Sbjct: 5 NFVELRNVTKRFGSNTV--IDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPS--- 59
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
EG +F+DG + S+ + + +VFQ+ LF +M++ E V + L+ LGV R E+
Sbjct: 60 --EGQIFIDGEDVTHRSIQQRD--ICMVFQS--YALFPHMSLGENVGYGLKMLGVPRAEL 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R++ AL +V L + F +SGG++QR+A L++KPKVL+ DEP S LD R
Sbjct: 114 KARVKEALAMVDLEGFEDRFVDQISGGQQQRVAWPRALILKPKVLLFDEPLSNLDANLRR 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ +R L K+ IT + V H+ +D ++V + G ++ G P++++
Sbjct: 174 SMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLY 225
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 127 bits (315), Expect = 2e-28
Identities = 78/231 (33%), Positives = 124/231 (52%), Gaps = 9/231 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M IEVEN+ KYG+ A ++ ++ VKKGE +GP+G+GK+T L L+ +
Sbjct: 1 MYAIEVENLVKKYGDFTA--VKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G V G + + E+ ++G+VFQ+P +T E + G++ E+
Sbjct: 57 ---SGKAIVAGHDVVKEP-QEVRKKIGIVFQDPSLDR-ELTAYENMYIHGMIYGLKGREL 111
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+I LK V+LW ++ SGG ++RL IA L+ +P++L LDEPT LDP R
Sbjct: 112 KEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRA 171
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+ +R + +E ++TI L H D + ADRI + D G+++ EG EE+
Sbjct: 172 HIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
>pir||C82957 probable ATP-binding component of ABC transporter PA5503 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951839|gb|AAG08888.1|AE004963_1 (AE004963) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 335
Score = 127 bits (315), Expect = 2e-28
Identities = 80/236 (33%), Positives = 126/236 (52%), Gaps = 12/236 (5%)
Query: 3 IIEVENV--SFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+IE +V +++ + +L+ LN++ G+ G+IG SG+GKST +N L S
Sbjct: 1 MIEFHDVHKTYRVAGREIPALQPTRLNIQAGQIFGLIGHSGAGKSTLLRLINRLEEPS-- 58
Query: 61 GEFEGNVFVDGLNTRE---HSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLG-VE 116
G + V+G + + RVG++FQ+ + L + TV + +A L G
Sbjct: 59 ---GGRILVEGEDVTALDAEGLRRFRQRVGMIFQH-FNLLSSKTVADNIAMPLRLAGGFS 114
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
R E+ R+ L V L D ++P LSGG+KQR+ IA L +P +L+ DE TS LDP
Sbjct: 115 RAEVDARVSELLARVGLSDHARKYPAQLSGGQKQRVGIARALACRPSILLCDEATSALDP 174
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
VL L+ +N+E K+TI+L+ H D + D++ V DGG +V +G +VF
Sbjct: 175 QTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDGGAIVEQGDVADVF 230
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 126 bits (314), Expect = 2e-28
Identities = 82/229 (35%), Positives = 131/229 (56%), Gaps = 13/229 (5%)
Query: 1 MNIIEVENVSFKYGNS--KAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M +IE+ +V Y + + ++L V++ V+ GEF+ I+GPSGSGKST L + G +
Sbjct: 1 MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTL-LNMIGCLDKP 59
Query: 59 INGEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLG 114
GE V ++G+ T S EL+ +G +FQ + + +T LE V + G
Sbjct: 60 TKGE----VIINGVKTSGLSDRELTKLRRDSIGFIFQQYNL-IPTLTALENVELPMIFRG 114
Query: 115 VEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
V R E RR + LK+V + + + P +SGG++QR+AIA L PK+L+ DEPT L
Sbjct: 115 VARAERERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTGNL 174
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVV 223
D +V+ +++ LN+E +T++LV H+ L E+ADR++ G+VV
Sbjct: 175 DTKSGRQVMGILKNLNEENGVTVVLVTHDPS-LSEYADRVIRIRDGKVV 222
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 126 bits (314), Expect = 2e-28
Identities = 78/234 (33%), Positives = 129/234 (54%), Gaps = 12/234 (5%)
Query: 1 MNIIE---VENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPH 57
MN +E VEN+ KYG+ +A +R ++ V++GE +GP+G+GK+T L L+
Sbjct: 1 MNKVEAIIVENLVKKYGDFEA--VRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKP 58
Query: 58 SINGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
+ G V G + + S E+ ++G+VFQ+P +T E + G++
Sbjct: 59 T-----SGRAIVAGHDVVKES-REVRKKIGVVFQDPSVDR-ELTAWENMYIHGRIYGLKG 111
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+E+ ++I LK V+LW+ ++ SGG ++RL IA L+ +P+VL LDEPT LDP
Sbjct: 112 QELKKKIEELLKFVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQ 171
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
R + ++ + +E +TI L H D + ADRI + D G+++ EG EE+
Sbjct: 172 TRAHIWEYIKTMKEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEEL 225
>gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacterium tumefaciens]
Length = 502
Score = 126 bits (314), Expect = 2e-28
Identities = 88/236 (37%), Positives = 128/236 (53%), Gaps = 18/236 (7%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
++V + YG+ L+ V+L+VK G IIGPSGSGKST LN L+
Sbjct: 266 LDVRRLGMAYGDLDV--LKGVDLSVKPGSVTCIIGPSGSGKSTLLRGLNRLVEPK----- 318
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNM----TVLEEVAFALENL-GVERE 118
G++ +DG + L RVG+VFQ+ FN+ T LE V +L+ + G+
Sbjct: 319 SGDILIDGESILAMKPETLRRRVGMVFQH-----FNLFPDHTALENVMLSLKKIKGLPAA 373
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E R + L V L ++ P LSGG++QR+AIA L M+P+V++ DE TS LDP
Sbjct: 374 EAERIAKAGLADVGLASRQHHRPGGLSGGQQQRVAIARALAMEPEVILFDEVTSALDPEL 433
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ VL+L+ L +T+++V H F AD++V D GRVV G PE +F+N
Sbjct: 434 VKGVLNLMAELG-TRGMTMVVVTHEMGFARRVADQVVFMDEGRVVEAGTPEAIFDN 488
>emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coelicolor]
Length = 253
Score = 126 bits (314), Expect = 2e-28
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 24/243 (9%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+++ E V +G + L+ ++L VK+GE +IGPSGSGKSTF +N L IN
Sbjct: 4 MVKAEGVHKSFGAVEV--LKGIDLEVKQGEVFCLIGPSGSGKSTFLRCINHL--EKINA- 58
Query: 63 FEGNVFVDG------------LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA 109
G ++VDG ++ VA +G+VFQ LF +MT +E V A
Sbjct: 59 --GRLYVDGELVGYRQKGDKLYELKDSEVALKRRDIGMVFQR--FNLFPHMTAVENVMEA 114
Query: 110 -LENLGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLD 168
++ G+ R + R R L+ V L DK +P LSGG++QR+AIA L M PK+++ D
Sbjct: 115 PVQVKGMSRAQARERARGLLERVGLADKAGNYPSQLSGGQQQRVAIARALAMDPKLMLFD 174
Query: 169 EPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKP 228
EPTS LDP +VL ++R L E +T+++V H F E D +V D G VV G P
Sbjct: 175 EPTSALDPELVGDVLDVMRDL-AESGMTMVVVTHEMGFAREVGDSLVFMDNGVVVESGNP 233
Query: 229 EEV 231
+V
Sbjct: 234 RDV 236
>dbj|BAB06710.1| (AP001517) phosphate ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 278
Score = 126 bits (314), Expect = 2e-28
Identities = 83/237 (35%), Positives = 130/237 (54%), Gaps = 13/237 (5%)
Query: 5 EVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFE 64
E +++ YG K ++L+++NL++ + E IIGPSG GKST+ TLN ++ +
Sbjct: 33 ETRDLNLWYG--KDHALKNINLSIYEKEVTAIIGPSGCGKSTYLKTLNRMVELVPSVRIS 90
Query: 65 GNVFVDGLNTREHS--VAELSTRVGLVFQNPDSQLFNMTVLEEVAFA-----LENLGVER 117
GN+ G N + S V EL TRVG+VFQ P+ F ++ + VA+ + N +
Sbjct: 91 GNISYRGRNILDKSFQVEELRTRVGMVFQKPNP--FPKSIFDNVAYGPRIHGIRNKKILS 148
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
E + R +R A ++ D+ E LSGG++QRL IA L ++P V+++DEPTS LDP
Sbjct: 149 EIVERSLRGAAIWDEVKDRLHENAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPK 208
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
++ L++ L KE +II+V HN +D+ F G VV + +F N
Sbjct: 209 STLKIEELIQELKKE--YSIIIVTHNMQQAARISDKTAFFLNGEVVEYDSTDIIFSN 263
>pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226117|gb|AAF41290.1| (AE002440) sulfate ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 357
Score = 126 bits (313), Expect = 3e-28
Identities = 83/238 (34%), Positives = 135/238 (55%), Gaps = 16/238 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I ++N++ +GN A L+++NLNV G+ + ++GPSG GK+T + GL + +G
Sbjct: 3 ITIQNLNKHFGNFHA--LKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGL--ENADG-- 56
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVERE---- 118
GN+ DG + V E +VG VFQ+ LF +M V + VAF L L
Sbjct: 57 -GNILFDGQDVTAKHVRE--RKVGFVFQH--YALFRHMNVFDNVAFGLTVLPKSERPSKG 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
++ ++ LKLV+L + +P LSGG++QR+A+A L ++PK+L+LDEP LD
Sbjct: 112 QIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKV 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
R+E+ + +R ++ +T ILV H+ + LE +D IVV + G++ G E ++ E
Sbjct: 172 RKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPE 229
>pir||B45917 nucleotide-binding protein proV - Salmonella typhimurium (fragment)
>gi|552022|gb|AAA88621.1| (M26063) proV gene product
[Salmonella typhimurium]
Length = 290
Score = 125 bits (312), Expect = 4e-28
Identities = 76/218 (34%), Positives = 121/218 (54%), Gaps = 10/218 (4%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
++D +L +++GE I+G SGSGKST LN LI + G V +DG++ + S A
Sbjct: 44 VKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT-----RGQVLIDGVDIAKISDA 98
Query: 81 ELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDK 136
EL ++ +VFQ+ + + +MTVL+ AF +E G+ +E + AL+ V L +
Sbjct: 99 ELREVRRKKIAMVFQS-FALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQVGLENY 157
Query: 137 REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKIT 196
+P LSGG +QR+ +A L + P +L++DE S LDPL R E+ + L + + T
Sbjct: 158 AHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRT 217
Query: 197 IILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
I+ + H+ D + DRI + G VV G P+E+ N
Sbjct: 218 IVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255
>pir||S74808 ABC-type transport protein slr1735 - Synechocystis sp. (strain PCC
6803) >gi|1652851|dbj|BAA17769.1| (D90909) ABC
transporter [Synechocystis sp.]
Length = 252
Score = 125 bits (312), Expect = 4e-28
Identities = 92/230 (40%), Positives = 126/230 (54%), Gaps = 13/230 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFE-GNVFVDGLNTREHSV 79
LR V + + + IIGPSG GKSTF LN L P S G E V + G + +
Sbjct: 24 LRGVTGEIYPKDVISIIGPSGCGKSTFLRCLNRLEPIS-GGRLEVAGVDLSGAKIDQKHL 82
Query: 80 AELSTRVGLVFQNPDSQLF-NMTVLEEVAFALEN-LGVEREEMWRRIRWALKLVKLWDKR 137
+L RVG+VFQ+ LF ++TVL+ + A L + E R L V L K
Sbjct: 83 RQLRVRVGMVFQH--FNLFPHLTVLQNLLLAPRKVLRIPMAEAKDRALTYLDKVGLGTKA 140
Query: 138 EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITI 197
+ +P LSGG+KQR+AIA L MKP++L+ DEPTS LDP EVL++++ L EE +T+
Sbjct: 141 DNYPDQLSGGQKQRVAIARGLCMKPEILLFDEPTSALDPELVGEVLNVMKQL-AEEGMTM 199
Query: 198 ILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE------FLERI 241
+V H F E ++R+ F+ G + EG P EVF N + FL RI
Sbjct: 200 AVVTHEMQFAREVSNRVFFFNQGIIEEEGDPNEVFRNPKSDRLRAFLSRI 249
>pir||E83478 probable ATP-binding component of ABC transporter PA1339 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947279|gb|AAG04728.1|AE004563_5 (AE004563) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 244
Score = 125 bits (312), Expect = 4e-28
Identities = 86/237 (36%), Positives = 139/237 (58%), Gaps = 14/237 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I ++NVS YG+ + L D + V KGE + + GPSGSGKST +N L P
Sbjct: 1 MISIKNVSKWYGDFQV--LTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQ---- 54
Query: 63 FEGNVFVDGLNTREH--SVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVERE 118
+G++ VDG + + ++ +L +RVG+VFQ+ +LF ++++ E + A ++ LG +E
Sbjct: 55 -KGDIVVDGTSIADPKTNLPKLRSRVGMVFQH--FELFPHLSITENLTIAQIKVLGRSKE 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E ++ L+ V L + + P LSGG++QR+AIA L M P V++ DEPTS LDP
Sbjct: 112 EATKKGLALLERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEM 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV 235
EVL ++ L E +T++ V H F + A+R++ D G++V + + EE F +V
Sbjct: 172 VNEVLDVMVQL-AHEGMTMMCVTHEMGFARKVANRVIFMDRGQIVEDCEKEEFFGDV 227
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 125 bits (311), Expect = 6e-28
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 26/231 (11%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
MNI+E+ N+S ++G+ Y+++ + LNV++GE LG++GP+GSGK+T + G++P+
Sbjct: 1 MNILEISNLSVRFGDF--YAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMVPY--- 55
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
E + +T VG + QN L N++V E + F G+E E
Sbjct: 56 ---------------EGEIRNYATSVGWMPQNSPLYL-NLSVEENLRFFASLYGIEDE-- 97
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
RR+ LKLV+L R+ NLSGG +QR +A ++ P++LVLDEPT+ +DP R
Sbjct: 98 -RRVEEMLKLVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRV 156
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
L +E K TI++ H D E +R+V+ G + EG PEE+
Sbjct: 157 SFWEQFEKLREEGK-TILVTTHYMD-EAERCERLVLIRNGSKIAEGTPEEI 205
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 125 bits (310), Expect = 7e-28
Identities = 83/238 (34%), Positives = 119/238 (49%), Gaps = 15/238 (6%)
Query: 1 MNIIEVENVSFKYGNSKAY---------SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTL 51
MN+IEV N+ Y +L+ + VKKGE G++GP+G+GK+T L
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 52 NGLIPHSINGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALE 111
L+ S G V GL+ + + E+ R+ LV + + + +T E + +
Sbjct: 61 TTLLEPS-----SGEAKVLGLDVVKDA-REIRKRINLVAEGERTLYWRLTAYENLRYFAS 114
Query: 112 NLGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPT 171
+ R E +RI LK+V LWD+R + N S G KQRLAIA L+ P+VL LDEPT
Sbjct: 115 IYYIPRREAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPT 174
Query: 172 SQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPE 229
LD V LVR L EE T++L H + E DRI + D G+++ PE
Sbjct: 175 LGLDVQSAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPE 232
>emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lactis]
Length = 368
Score = 124 bits (309), Expect = 1e-27
Identities = 78/247 (31%), Positives = 138/247 (55%), Gaps = 19/247 (7%)
Query: 3 IIEVENVSFKYGNSKAY--SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
IIE+ N+S ++ ++++ L+++KG+ G+IG SG+GKST T+N L+
Sbjct: 4 IIELNNLSVQFHQKGRLVTAVKNATLHIEKGDIYGVIGYSGAGKSTLVRTIN-LLQKPTE 62
Query: 61 GEF--EGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGV 115
G+ G D N + + A+L ++G++FQ+ + L TV VAFAL++ +
Sbjct: 63 GQIVINGEKIFDSENPVKFTGAKLREFRQKIGMIFQH-FNLLSEKTVFNNVAFALQHSQI 121
Query: 116 E----------REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVL 165
E ++E ++ LKLV L D +++P LSGG+KQR+AIA L P++L
Sbjct: 122 EDKNGKKRYLTKKEKNDKVTELLKLVDLADLSDKYPAQLSGGQKQRVAIARALANDPEIL 181
Query: 166 VLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVME 225
+ DE TS LDP ++L L++ L+++ IT++L+ H + E A+++ V G ++ +
Sbjct: 182 ISDEGTSALDPKTTNQILDLLKSLHEKLGITVVLITHEMQVVKEIANKVAVMQNGEIIEQ 241
Query: 226 GKPEEVF 232
++F
Sbjct: 242 NSLIDIF 248
>pir||F81947 probable amino acid permease ATP-binding protein NMA1000 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379702|emb|CAB84269.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 251
Score = 124 bits (309), Expect = 1e-27
Identities = 87/240 (36%), Positives = 142/240 (58%), Gaps = 15/240 (6%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSING 61
+I++ N+ +G + LR +NL+V KG+ + I+GPSGSGK+TF LN L +P
Sbjct: 1 MIKIRNIHKTFGKNTI--LRGINLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQI 58
Query: 62 EFEGN--VFVD-GLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVER 117
EF+ + +D +H + L + G+VFQ + LF + T LE V + V+
Sbjct: 59 EFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYN--LFPHKTALENVMEG--PVAVQG 114
Query: 118 EEMWRRIRWALKLVK---LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
+ + ALKL++ L DK + +P LSGG++QR+ IA L ++P++++ DEPTS L
Sbjct: 115 KPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSAL 174
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
DP ++VL+ ++ L + E T+++V H F LE A +VV DGG +V +G P+E+F++
Sbjct: 175 DPELVQDVLNAMKELAR-EGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPKELFDH 233
>pir||F83122 probable ATP-binding component of ABC transporter PA4192 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950402|gb|AAG07579.1|AE004835_8 (AE004835) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 247
Score = 124 bits (309), Expect = 1e-27
Identities = 88/234 (37%), Positives = 132/234 (55%), Gaps = 14/234 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I +E V+ YG ++L DV+ V +GE + + GPSGSGKST TLN L P I G
Sbjct: 1 MIRLEKVNKWYG--AYHALADVDEQVGRGEVVVVCGPSGSGKSTLIRTLNRLEP--IQG- 55
Query: 63 FEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENL-GVERE 118
G + +DG ++ + + +G VFQ LF ++ VL+ A L G++
Sbjct: 56 --GRILIDGQDIHAPGLDLNRFRSHIGFVFQQ--FNLFPHLNVLDNCTLASLRLRGLKPA 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E R+ L+ V L DK FP LSGG++QR+AIA L M+P +++ DEPTS LDP
Sbjct: 112 EARRQAMALLERVGLADKAAAFPARLSGGQQQRVAIARALAMEPPLMLFDEPTSALDPEM 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
EVL ++R L + + +T+++V H F + ADR++ D GRV+ P++ F
Sbjct: 172 VGEVLLVMRDLAR-DGMTMVVVTHEMGFAHDVADRVLFMDAGRVLERASPDDFF 224
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 124 bits (308), Expect = 1e-27
Identities = 83/234 (35%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IEVE++S YG++ A +++V+ +V+KGE LG +GP+G+GK+T L G IP +
Sbjct: 1 MIEVEHLSKVYGSTTA--IQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATT--- 55
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
G V V G + E S+A + R+G + +NP +MTV + F GV+ + +
Sbjct: 56 --GTVRVAGFDVHEQSLA-VRKRIGYLPENPPLY-GDMTVASFLNFVASIKGVKPGDRRQ 111
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R+ WA++ +L +KR+ LS G KQR+ IA +V P V++LDEPT LDP EV
Sbjct: 112 RVIWAMERCQLTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEV 171
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
+L++ L ++ TIIL H + DR+ + + GRVV P+ + ++
Sbjct: 172 RNLIKSLAEDH--TIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNLLAELK 223
>pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA0687 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658105|gb|AAF96587.1| (AE004398) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 351
Score = 124 bits (308), Expect = 1e-27
Identities = 75/233 (32%), Positives = 134/233 (57%), Gaps = 12/233 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N + ++N+ ++G++ + +++L +KKG + ++GPSG GK+T + GL +
Sbjct: 5 NFVVLKNICKRFGSNTV--IGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPT--- 59
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
G +F+DG + E S+ + + +VFQ+ LF +M++ E VA+ L+ L + EE+
Sbjct: 60 --SGQIFIDGEDVTERSIQQRD--ICMVFQS--YALFPHMSLYENVAYGLKMLKLPSEEV 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ ALK+V L E + +SGG++QR+A+A LV+KPKVL+ DEP S LD R
Sbjct: 114 RQRVDEALKIVDLEGMGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRR 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+ +R L + IT + V H+ +D ++V G ++ G P+E+++
Sbjct: 174 SMRETIRELQQRFDITSLYVTHDQAEAFAVSDTVIVMKQGDIMQIGTPQELYK 226
>gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus solfataricus]
Length = 225
Score = 123 bits (307), Expect = 2e-27
Identities = 80/230 (34%), Positives = 135/230 (57%), Gaps = 12/230 (5%)
Query: 1 MNIIEVENVSFKY-GNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
M++I +ENV+ Y GN K +LRD+NL++ +GEF+ I+GPSGSGKST L++ G++
Sbjct: 1 MSVIRLENVTKIYEGNVKTIALRDINLSIDEGEFISILGPSGSGKSTL-LSILGILDRPS 59
Query: 60 NGEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLGV 115
+G V++ ++ + S E+S +G VFQN + + ++VL+ V L G+
Sbjct: 60 ----QGKVYIYEVDVTKLSDNEISKIRNEYIGFVFQN-FNLIQRLSVLQNVELPLVARGI 114
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+++ +LKLV L + P LSGG++QR+AIA L PK+++ DEPT LD
Sbjct: 115 PKKKREEIAINSLKLVGLDGLINKKPSELSGGQQQRVAIARALAQNPKIILADEPTGNLD 174
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVME 225
+ V+++ + +N+E K TI +V H+ + + + R + G++V E
Sbjct: 175 SSNAKIVMNIFKKINEEFKTTIAVVTHDRE-VASYTKRKIYIRDGKIVGE 223
>pir||I41113 abc protein - Escherichia coli >gi|145169|gb|AAC36869.1| (L08626)
putative [Escherichia coli] >gi|739998|prf||2004284B abc
gene [Escherichia coli]
Length = 203
Score = 123 bits (307), Expect = 2e-27
Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 11/205 (5%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+I++ N++ F G +L +V+L+V G+ G+IG SG+GKST +N L
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLL-----E 55
Query: 61 GEFEGNVFVDGLNTREHSVAELST---RVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
EG+V VDG S +EL+ ++G++FQ+ + L + TV VA LE +
Sbjct: 56 RPTEGSVLVDGQELTTLSESELTKARRQIGMIFQH-FNLLSSRTVFGNVALPLELDNTPK 114
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
+E+ RR+ L LV L DK + +P NLSGG+KQR+AIA L PKVL+ E TS LDP
Sbjct: 115 DEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCVEATSALDPA 174
Query: 178 GREEVLSLVRLLNKEEKITIILVEH 202
+L L++ +N+ +TI+L+ H
Sbjct: 175 TTRSILELLKDINRRLGLTILLITH 199
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 123 bits (307), Expect = 2e-27
Identities = 82/238 (34%), Positives = 134/238 (55%), Gaps = 16/238 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I ++N++ +GN A L+++NLNV G+ + ++GPSG GK+T + GL + +G
Sbjct: 3 ITIQNLNKHFGNFHA--LKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGL--ENADG-- 56
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVERE---- 118
G + DG + V E +VG VFQ+ LF +M V + VAF L L
Sbjct: 57 -GKILFDGQDVTAKHVRE--RKVGFVFQH--YALFRHMNVFDNVAFGLTVLPKSERPSKG 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
++ ++ LKLV+L + +P LSGG++QR+A+A L ++PK+L+LDEP LD
Sbjct: 112 QIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKV 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
R+E+ + +R ++ +T ILV H+ + LE +D IVV + G++ G E ++ E
Sbjct: 172 RKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPE 229
>sp|Q58206|Y796_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0796
>gi|2127938|pir||D64399 glutamine transport ATP-binding
protein Q homolog - Methanococcus jannaschii
>gi|1591493|gb|AAB98791.1| (U67524) ABC transporter,
ATP-binding protein [Methanococcus jannaschii]
Length = 235
Score = 123 bits (306), Expect = 2e-27
Identities = 85/239 (35%), Positives = 135/239 (55%), Gaps = 25/239 (10%)
Query: 3 IIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+I+++NV+ +K G Y+L++VNLN+K+GEF+ I+GPSGSGKST LN I ++
Sbjct: 1 MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTM---LN--IIGCLD 55
Query: 61 GEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFNM----TVLEEVAFAL-- 110
EG V++D + T + EL+ ++G VFQ FN+ T LE V L
Sbjct: 56 KPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQ-----FNLIPLLTALENVELPLIF 110
Query: 111 -ENLGVEREEMWRRIRWALKLVKLWDKREEFPPN-LSGGEKQRLAIASVLVMKPKVLVLD 168
+ EE +R LK+ +L ++ PN LSGG++QR+AIA L P +++ D
Sbjct: 111 KYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILAD 170
Query: 169 EPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGK 227
EPT LD E+++ L++ LN+E+ T+++V H+ + + +RI+ G V E K
Sbjct: 171 EPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN-VARFGERIIYLKDGEVEREEK 228
>sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|2052275|emb|CAA38188.1| (X54292) malK [Salmonella
typhimurium]
Length = 369
Score = 123 bits (306), Expect = 2e-27
Identities = 88/290 (30%), Positives = 150/290 (51%), Gaps = 33/290 (11%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +++ NV+ +G+ +D+NL++ GEF+ +GPSG GKST + GL +
Sbjct: 1 MASVQLRNVTKAWGD--VVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETIT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++F+ TR + + VG+VFQ+ + +++V E ++F L+ G ++E M
Sbjct: 57 ---SGDLFIG--ETRMNDIPPAERGVGMVFQSY-ALYPHLSVAENMSFGLKLAGAKKEVM 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ ++++L E P LSGG++Q +AI LV +P+V +LDEP S LD R
Sbjct: 111 NQRVNQVAEVLQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRV 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE------- 233
++ + L+K T+I V H+ + AD+IVV D GRV GKP E++
Sbjct: 171 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFV 230
Query: 234 -------NVEFL---------ERIGIRIPTRVKIGYELKKRGITRRAVLS 267
+ FL E++ + +P R +I ++ RG+ A +S
Sbjct: 231 AGFIGSPKMNFLPVKVTATAIEQVQVELPNRQQIWLPVESRGVQVGANMS 280
>pir||D71649 glutamine transport ATP-binding protein glnq (glnQ2) RP868 -
Rickettsia prowazekii >gi|3861393|emb|CAA15292.1|
(AJ235273) GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ
(glnQ2) [Rickettsia prowazekii]
Length = 240
Score = 123 bits (306), Expect = 2e-27
Identities = 90/248 (36%), Positives = 134/248 (53%), Gaps = 19/248 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I +E VS YG K Y++++++LN E IIGPSGSGK+T LN L S
Sbjct: 1 MIILEKVSKHYG--KNYAIKNIDLNFTTKETTVIIGPSGSGKTTLLRILNNLEEPS---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALEN-LGVEREEM 120
G VD + +L +VG+VFQN LF + TV E + + N L + +E+
Sbjct: 55 -SGTFLVDQQKLMQKDRRKLCLKVGMVFQN--FNLFPHFTVGENLMYTPVNVLKLPKEQA 111
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
L KL K +P +LSGG+KQR+AIA L+MKP++L+ DEPTS LDP +
Sbjct: 112 ISMAIELLTKFKLIQKFYAYPTSLSGGQKQRIAIARALMMKPEILLFDEPTSALDPENIK 171
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE---- 236
+V+ + LL + ++++++V H+ F ADRI+ D G+++ E F+
Sbjct: 172 DVIENINLL--KTQMSMVVVTHHLKFAKLIADRIIFMDQGQILANQPANEFFKKPASHRA 229
Query: 237 --FLERIG 242
FLE IG
Sbjct: 230 RLFLENIG 237
>gb|AAF25533.1|AF104994_3 (AF104994) ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 239
Score = 123 bits (306), Expect = 2e-27
Identities = 87/231 (37%), Positives = 130/231 (55%), Gaps = 11/231 (4%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+++ E V +G + L+ ++L VK+GE +IGPSGSGKSTF +N L + + +
Sbjct: 1 MVKAEGVHKSFGAVEV--LKGIDLEVKQGEVFCLIGPSGSGKSTFLRCINHLEKINADVD 58
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVEREEM 120
EG+ + ++ VA +G+VFQ LF +MT +E V A ++ G+ R +
Sbjct: 59 AEGDKLYE---LKDSEVALKRRDIGMVFQR--FNLFPHMTAVENVMEAPVQVKGMSRAQA 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R R L+ V L DK +P LSGG++QR+AIA L M PK+++ DEPTS LDP
Sbjct: 114 RERARGLLERVGLADKAGNYPSQLSGGQQQRVAIARALAMDPKLMLFDEPTSALDPELVG 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+VL ++R L E +T+++V H F E D +V D G VV G P +V
Sbjct: 174 DVLDVMRDL-AESGMTMVVVTHEM-FAREVGDSLVFMDNGVVVESGNPRDV 222
>pir||D82879 ABC Transporter UU538 [imported] - Ureaplasma urealyticum
>gi|6899542|gb|AAF30951.1|AE002152_10 (AE002152) ABC
Transporter [Ureaplasma urealyticum]
Length = 433
Score = 123 bits (306), Expect = 2e-27
Identities = 66/181 (36%), Positives = 107/181 (58%), Gaps = 2/181 (1%)
Query: 81 ELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKR-EE 139
EL RVG VFQ P+ QLF T+ +++ F NLGV++ E +R ++ L + L D E
Sbjct: 226 ELRRRVGFVFQFPEYQLFKDTIEKDIMFGPVNLGVKKSEAKKRAKFYLNKLGLGDDYLER 285
Query: 140 FPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIIL 199
P LSGG+K+R+AIA +L ++ +LV DEPT+ LDP G E++ ++ L K T+ +
Sbjct: 286 SPFGLSGGQKRRVAIAGILAIQNDILVFDEPTAGLDPAGEHEMMQII-LDAKANNKTVFV 344
Query: 200 VEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVKIGYELKKRG 259
+ H + +LE AD ++V D G ++ G P E+F + + I++P + + EL K+
Sbjct: 345 ITHTMEHVLEVADEVIVMDEGEIIKTGTPYEIFFDQHIINSTSIQVPRVIAVINELIKKD 404
Query: 260 I 260
+
Sbjct: 405 L 405
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 123 bits (306), Expect = 2e-27
Identities = 74/230 (32%), Positives = 135/230 (58%), Gaps = 9/230 (3%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N+IEV ++S Y N + ++ +N+ ++KGE +G++GP+G+GKST ++ LI +
Sbjct: 591 NMIEVIDLSKTYRNRQV--VKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPT--- 645
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
G+V + G + + S A + + +G+V Q + ++T E +AF + G++ EE+
Sbjct: 646 --SGDVLIKGGSIHKQSKA-IRSILGVVPQEI-AVYHDLTARENLAFFGKIYGLKGEELK 701
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
R+ L+LV L +++ + SGG K+RL IA L+ +P+++++DEPT +DP R
Sbjct: 702 HRMESTLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSH 761
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+L V+ LN+E ++T+I H + + DR+ + D G V+ G +EV
Sbjct: 762 ILETVKTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEV 811
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 123 bits (305), Expect = 3e-27
Identities = 78/235 (33%), Positives = 127/235 (53%), Gaps = 5/235 (2%)
Query: 1 MNIIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M I VEN+S FK G ++ ++ +V++ + G G++GPSG GK+TF + GL +
Sbjct: 1 MTTIRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPT 60
Query: 59 INGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
+ N V + R ++ + +VFQN + NMTV + +AF L+ V ++
Sbjct: 61 SGYIYFDNEAVS--SPRRVMMSPEKRGIAMVFQNW-ALYPNMTVFDNIAFPLKLAKVPKD 117
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
++ +++ + + L +P LSGG+ QR AIA LV PKVL+LDEP S LD
Sbjct: 118 KIENKVKEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFSNLDAQI 177
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
RE +LVR + +E K+T ++V H+ + A++ V G+ G P E++E
Sbjct: 178 RESARALVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPTEIYE 232
>pir||H81391 amino-acid ABC transporter ATP-binding protein Cj0469 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967940|emb|CAB75107.1| (AL139075) amino-acid ABC
transporter ATP-binding protein [Campylobacter jejuni]
Length = 253
Score = 123 bits (305), Expect = 3e-27
Identities = 83/239 (34%), Positives = 135/239 (55%), Gaps = 16/239 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+I+++EN+ YG+ A L+D+NL VK E + I+GPSG GKST +NGL +
Sbjct: 1 MSILKIENLQKYYGSHHA--LKDINLEVKAKEVVVILGPSGCGKSTLLRCINGLEEIA-- 56
Query: 61 GEFEGNVFVDG--LNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVER- 117
GN+++D ++ + +VG+VFQ+ +LF +EE L + V++
Sbjct: 57 ---SGNIYIDNEKIDKDFKEWPRMRQKVGMVFQS--YELFEHLSVEE-NILLGPMKVQKR 110
Query: 118 --EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+E+ + + L+ V L K +P LSGG+KQR+AI L M P++++ DE T+ LD
Sbjct: 111 KKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALD 170
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
P EVL ++ L K E +T+++V H F AD+I+ D G+++ E P+ F+N
Sbjct: 171 PEIVREVLEVMLNLAK-EGMTMLIVTHEMGFAKAVADKIIFMDEGKIIEENDPKSFFKN 228
>gb|AAD51880.1|AF102556_4 (AF102556) ATP-binding protein [Salmonella enteritidis]
Length = 315
Score = 122 bits (304), Expect = 4e-27
Identities = 78/223 (34%), Positives = 119/223 (52%), Gaps = 16/223 (7%)
Query: 38 GPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTRE---HSVAELSTRVGLVFQNPD 94
G SG+GKST TLN L S +G V V+G+ ++ + R+G++FQ+
Sbjct: 16 GTSGAGKSTLLRTLNALTRPS-----QGRVNVNGVEISALDGKALRQARQRIGMIFQH-F 69
Query: 95 SQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAI 154
+ + TV + VAF+L+ G ER ++ R+ L LV L DK FP LSGG+KQR+ I
Sbjct: 70 NLMHTRTVAQNVAFSLKAAGWERSKIAPRVAEILTLVGLADKANRFPVQLSGGQKQRVGI 129
Query: 155 ASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRI 214
A + P VL+ DEPTS LD +L+L+R +N + ITI+L+ H + + DR+
Sbjct: 130 ARAIANHPDVLLCDEPTSALDLETSATILALLRQINAQLGITIVLITHEMNVIKSICDRV 189
Query: 215 VVFDGGRVVMEGK-------PEEVFENVEFLERIGIRIPTRVK 250
V GG+VV G+ P+ F + + +P R++
Sbjct: 190 AVMSGGKVVESGEVFDEFAHPQHAFTQQLVSHTLNLTLPERLR 232
>pir||F81348 ABC transport system ATP-binding protein Cj0774c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968220|emb|CAB73039.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 336
Score = 122 bits (304), Expect = 4e-27
Identities = 82/262 (31%), Positives = 137/262 (51%), Gaps = 30/262 (11%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I+++N+ YG K + DV+L +KKGE I+G SG+GKST +NGL +
Sbjct: 1 MIKIKNLKKYYG--KELVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQ---- 54
Query: 63 FEGNVFV------DGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVE 116
EG++ V D + + L +G++FQN + + V E VA L +
Sbjct: 55 -EGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQN-FALMERKNVFENVAMPLRTHYTQ 112
Query: 117 --------------REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKP 162
+E+ +++ L++V L K + +P LSGG+KQR+AIA L + P
Sbjct: 113 CKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNP 172
Query: 163 KVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV 222
K+L+ DE TS LDP + +L L+ +N E IT++LV H D + + A + ++ + G++
Sbjct: 173 KILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQI 232
Query: 223 VMEGKPEEVF--ENVEFLERIG 242
+ G +E+F N + E +G
Sbjct: 233 IGSGAIDELFLRPNAKMKEFLG 254
>gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD)
[Archaeoglobus fulgidus] >gi|7445611|pir||A69471
dipeptide ABC transporter, ATP-binding protein (dppD)
homolog - Archaeoglobus fulgidus
>gi|2648781|gb|AAB89480.1| (AE000980) dipeptide ABC
transporter, ATP-binding protein (dppD) [Archaeoglobus
fulgidus]
Length = 313
Score = 122 bits (302), Expect = 6e-27
Identities = 77/245 (31%), Positives = 146/245 (59%), Gaps = 21/245 (8%)
Query: 1 MNIIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI--P 56
M ++++EN++ F+ ++ +V+++V+KGEF+ I+G SG GKST ++ LI P
Sbjct: 1 MMLLDIENLTTIFRTRRGVVRAVDNVSMSVEKGEFISIVGESGCGKSTLAHSVMRLIDYP 60
Query: 57 HSINGEFEGNVFVDG---LNTREHSVAEL-STRVGLVFQNPDSQLFNMTVLEEVA----- 107
I+G G + DG L+ + + E+ +++G+VFQ+P + ++ LE++
Sbjct: 61 GEISG---GKIIFDGVDLLSLGDEEMREIRGSKIGMVFQDP---MTSLDPLEKIGDQISE 114
Query: 108 FALENLGVEREEMWRRIRWALKLVKLWDKR-EEFPPNLSGGEKQRLAIASVLVMKPKVLV 166
+E++ V ++E W+ R L+ V L +R + +P LSGG++QR+ IA + + PK+L+
Sbjct: 115 TIMEHMDVTKKEAWQMAREMLEKVGLQPERVDSYPHQLSGGQRQRVMIAMAISLNPKLLI 174
Query: 167 LDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEG 226
DEPT+ LD + +E+++ L+ + +E + ++L+ H+ E +DRI V G +V G
Sbjct: 175 ADEPTTALDVIVQEKIMDLLEDMKREGR-AVMLITHDFALAAERSDRIAVMYAGWLVELG 233
Query: 227 KPEEV 231
K E++
Sbjct: 234 KAEKL 238
>pir||G70390 phosphate transport ATP binding protein - Aquifex aeolicus
>gi|2983537|gb|AAC07112.1| (AE000720) phosphate
transport ATP binding protein [Aquifex aeolicus]
Length = 257
Score = 121 bits (301), Expect = 8e-27
Identities = 81/242 (33%), Positives = 132/242 (54%), Gaps = 15/242 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I+V+N++F YGN A L+D+ V + + IIGPSG GK+T N + +
Sbjct: 9 IDVKNLNFWYGNYHA--LKDITFPVYENKITAIIGPSGCGKTTLLRCFNRMHDLYEGARY 66
Query: 64 EGN--VFVDGLNTREHSVAEL--STRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
EG ++ D +N +V L R+G+VFQ P+ F ++ E VA+ L+ G++++
Sbjct: 67 EGEAILYPDEINLIGKNVDPLLVRMRIGMVFQKPNP--FPKSIYENVAYGLKLRGIKKKS 124
Query: 120 MW-RRIRWALKLVKLW----DKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
+ ++ AL+ LW D+ E +LSGG++QRL IA + ++P+VL++DEPTS L
Sbjct: 125 ILDEKVEKALRDAALWDEVKDRLHENAYSLSGGQQQRLCIARAIAVEPEVLLMDEPTSAL 184
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
DP+ ++ L+ L K K+TII+V HN +D G ++ G E++F
Sbjct: 185 DPISTAKIEDLIVELKK--KVTIIIVTHNMQQAARVSDFTAFMYMGELIEFGPTEKIFTK 242
Query: 235 VE 236
E
Sbjct: 243 PE 244
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 121 bits (301), Expect = 8e-27
Identities = 79/234 (33%), Positives = 129/234 (54%), Gaps = 10/234 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M I V N+ +G KA V+ VK GEF+ ++GPSG GK+T L L G+ +
Sbjct: 1 MPSIRVVNLKKYFGKVKAVD--GVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G ++ D + + + VG+VFQN + +MTV E +AF L + ++E+
Sbjct: 57 ---SGEIYFDDVLVND--IPPKYREVGMVFQNY-ALYPHMTVFENIAFPLRARRISKDEV 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ + + + + + P LSGG++QR+A+A LV +PKVL+ DEP S LD R
Sbjct: 111 EKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRM 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ + ++ L +E IT + V H+ + A RI VF+ G++V G P+EV+++
Sbjct: 171 IMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDS 224
>pir||S05329 inner membrane protein malK - Salmonella typhimurium
Length = 369
Score = 121 bits (300), Expect = 1e-26
Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 33/290 (11%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +++ NV+ +G+ +D+NL++ GEF+ +GPSG GKST + GL +
Sbjct: 1 MASVQLRNVTKAWGD--VVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETIT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++F+ TR + + VG+VFQ+ + +++V E ++F + G ++E M
Sbjct: 57 ---SGDLFIG--ETRMNDIPPAERGVGMVFQSY-ALYPHLSVAENMSFRPQAAGAKKEVM 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ ++++L E P LSGG++Q +AI LV +P+V +LDEP S LD R
Sbjct: 111 NQRVNQVAEVLQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRV 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE------- 233
++ + L+K T+I V H+ + AD+IVV D GRV GKP E++
Sbjct: 171 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFV 230
Query: 234 -------NVEFL---------ERIGIRIPTRVKIGYELKKRGITRRAVLS 267
+ FL E++ + +P R +I ++ RG+ A +S
Sbjct: 231 AGFIGSPKMNFLPVKVTATAIEQVQVELPNRQQIWLPVESRGVQVGANMS 280
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 121 bits (300), Expect = 1e-26
Identities = 81/233 (34%), Positives = 130/233 (55%), Gaps = 16/233 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M++IE+ ++ YG+ K L DVNL V++GE LGIIGP+G+GKST L + L+ +
Sbjct: 2 MHVIELSGITKSYGDIKV--LEDVNLKVREGETLGIIGPTGAGKSTL-LRIMDLLERPDD 58
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
GE + G N + E+ R+G+VFQN + +F TV E + + G E
Sbjct: 59 GE----ILFMGENVDDLKPLEVRRRMGMVFQN--TPVFRGTVAESILYGPRIRGERPHES 112
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
++ L+ + L LSGGE+QRLA+A VL+ +P+V++LDE TS LDP+ R
Sbjct: 113 --EVKDVLETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRS 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+ ++ L+ +T+I H+ + ADRI + + ++ G+P E+F+
Sbjct: 171 RMEDVIAELD----VTVIFTTHDLLQGQKLADRIAILNRS-ILQTGEPREIFK 218
>pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumoniae (strain
CWL029) >gi|4376554|gb|AAD18429.1| (AE001613) Dipeptide
Transporter ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163441|gb|AAF73675.1| (AE002208) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978654|dbj|BAA98490.1| (AP002546) dipeptide
transporter ATPase [Chlamydophila pneumoniae J138]
Length = 341
Score = 121 bits (300), Expect = 1e-26
Identities = 84/238 (35%), Positives = 131/238 (54%), Gaps = 10/238 (4%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSING 61
II V++VS K G+ L V+ +V GE GI+G SGSGK+T L+ L +P S G
Sbjct: 8 IISVQDVSKKLGDH--ILLSKVSFSVYPGEVFGIVGHSGSGKTTLLRCLDFLDMPTS--G 63
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNM-TVLEEVAFALE--NLGVERE 118
F + L T++ S S +V + QN LF+ TV E +A+ L + + +
Sbjct: 64 SISVAGFDNSLPTQKFSRRNFSKKVAYISQNYG--LFSSKTVFENIAYPLRIHHSEMSKS 121
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E+ ++ L + L+ + + +P NLSGG+KQ++AIA +V +P+V++ DE TS LDP
Sbjct: 122 EVEEQVYDTLNFLNLYHRHDAYPGNLSGGQKQKVAIARAIVCQPEVVLCDEITSALDPKS 181
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
E ++ + LN+E IT++LV H D + + ++V G V G EE+F N E
Sbjct: 182 TENIIERLLQLNQERGITLVLVSHEIDVVKKICSHVLVMHQGAVEELGTTEELFLNSE 239
>pir||D72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981700|gb|AAD36228.1|AE001772_7 (AE001772)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 323
Score = 121 bits (300), Expect = 1e-26
Identities = 74/246 (30%), Positives = 136/246 (55%), Gaps = 16/246 (6%)
Query: 1 MNIIEVENVSFKY--GNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M ++E++NVS +Y G ++ +V+ +++KGE LG++G SG GKST ++ L+P
Sbjct: 1 MKVLELKNVSVRYKTGEKTVNAVENVSFHLEKGETLGLVGESGCGKSTLGFSIMRLLPKG 60
Query: 59 INGEFEGNVFVDGLNTREHSVAEL----STRVGLVFQNPDSQLFNMTVLEEVAFALENLG 114
+ +G++ ++G++ S E+ ++V ++FQ+P + L + +E+ +E +
Sbjct: 61 T--KIDGSIKIEGIDISSLSDEEMRQIRGSKVAMIFQDPMTSLNPILRIED--HFVEMIL 116
Query: 115 VEREEMWRRIRWALKLVKLWD------KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLD 168
R E+ + L L D + +++P SGG +QR+ IA +V+ P VL+ D
Sbjct: 117 THRPELSKEDARELAAKALEDVGINRNRLKDYPFQFSGGMRQRVMIALSIVLNPAVLIAD 176
Query: 169 EPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKP 228
EPT+ LD + + +++ L+ L KE + +IL+ H+ + E ADRI V G +V
Sbjct: 177 EPTTSLDVIVQAQIMELLEKLTKEHRTAMILITHDMGLVAEAADRIGVMYAGHLVELASK 236
Query: 229 EEVFEN 234
E +F N
Sbjct: 237 ERIFTN 242
>pir||E81023 ABC transporter, ATP-binding protein NMB1948 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7227207|gb|AAF42277.1| (AE002543) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 245
Score = 121 bits (300), Expect = 1e-26
Identities = 85/250 (34%), Positives = 128/250 (51%), Gaps = 26/250 (10%)
Query: 16 SKAYSLRD---------VNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGN 66
SK Y RD +L ++ GE G++G SG+GKST +N L+ +G+ N
Sbjct: 8 SKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAGKSTLLRLIN-LLERPDSGKV--N 64
Query: 67 VFVDGLNTREHS-VAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIR 125
V L + + + + +G+VFQ + L N TV + VAF LE G E++ R++
Sbjct: 65 VCGQELTALDAAALRQARQNIGMVFQQ-FNLLSNRTVADNVAFPLEIAGWPSEKIKARVK 123
Query: 126 WALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSL 185
L++V L ++ +P LSGG+KQR+ IA L KP+V++ DEPTS LDP VL
Sbjct: 124 ECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKPQVILADEPTSALDPATTRSVLEC 183
Query: 186 VRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRI 245
+ +NK +TI++V H + DR + D G+V VE +E G +I
Sbjct: 184 LEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKV------------VEIVEVRGNQI 231
Query: 246 PTRVKIGYEL 255
+ IG EL
Sbjct: 232 HAQSDIGREL 241
>pir||E81968 probable ABC transport ATP-binding subunit NMA0504 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379248|emb|CAB83797.1| (AL162753) putative ABC
transport ATP-binding subunit [Neisseria meningitidis
Z2491]
Length = 245
Score = 121 bits (300), Expect = 1e-26
Identities = 86/250 (34%), Positives = 126/250 (50%), Gaps = 26/250 (10%)
Query: 16 SKAYSLRD---------VNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGN 66
SK Y RD +L ++ GE G++G SG+GKST +N L+ G+ N
Sbjct: 8 SKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAGKSTLLRLIN-LLERPDTGKV--N 64
Query: 67 VFVDGLNTREHS-VAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIR 125
V L + + + + +G+VFQ + L N TV + VAF LE G E++ R+
Sbjct: 65 VCGQELTALDAAALRQARQNIGMVFQQ-FNLLSNRTVADNVAFPLEIAGWPSEKIKARVA 123
Query: 126 WALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSL 185
L++V L ++ +P LSGG+KQR+ IA L KP+V++ DEPTS LDP VL
Sbjct: 124 ECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKPQVILADEPTSALDPATTRSVLEC 183
Query: 186 VRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRI 245
+ +NK +TI++V H + DR + D G+V VE +E G +I
Sbjct: 184 LEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKV------------VEIVEVRGNQI 231
Query: 246 PTRVKIGYEL 255
R IG EL
Sbjct: 232 HARSDIGREL 241
>pir||A72452 probable peptide transport ATP-binding protein APE2261 - Aeropyrum
pernix (strain K1) >gi|5105962|dbj|BAA81273.1|
(AP000064) 320aa long hypothetical peptide transport
ATP-binding protein [Aeropyrum pernix]
Length = 320
Score = 120 bits (299), Expect = 1e-26
Identities = 83/249 (33%), Positives = 140/249 (55%), Gaps = 21/249 (8%)
Query: 1 MNIIEVENVSFKYGNSKAY--SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI--P 56
M +++++++ Y ++ V+L+V KGE++ I+G SGSGKST L++ LI P
Sbjct: 5 MAVLDIQDLKVHYYTLTGIVRAVDGVSLSVNKGEWISIVGESGSGKSTLALSIPRLIMPP 64
Query: 57 HSINGEFEGNVFVDGLNTREHSVAEL----STRVGLVFQNPDSQLFNM-TVLEEVA---- 107
I G G + G++ + EL +G+VFQ+P + L TV ++A
Sbjct: 65 GRIVG---GRILYSGVDLLSLAGEELRRYRGREIGMVFQDPTAYLDPYRTVGSQIAESLL 121
Query: 108 -FALENLGVEREEMWRRIRWALKLVKL-WDKREEFPPNLSGGEKQRLAIASVLVMKPKVL 165
L + G E E M AL+LV + D+ +P LSGG++QR+AIA+ + ++PK+L
Sbjct: 122 EHGLASSGSEAESMAGD---ALELVGIPRDRASVYPHQLSGGQRQRVAIAAAVALEPKIL 178
Query: 166 VLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVME 225
+ DEPT+ LD + + +++ L++ L +E +T++LV H+ E++DRI V G +V
Sbjct: 179 IADEPTTALDVVVQAKIMDLMKKLQEERGLTVMLVTHDIGLAAEYSDRIAVMYAGELVEI 238
Query: 226 GKPEEVFEN 234
G E+V N
Sbjct: 239 GPAEDVVSN 247
>gi|9507703 hypothetical protein [Plasmid pNZ4000] >gi|5123519|gb|AAD40358.1|
(AF036485) hypothetical protein [Plasmid pNZ4000]
Length = 266
Score = 120 bits (299), Expect = 1e-26
Identities = 78/249 (31%), Positives = 133/249 (53%), Gaps = 9/249 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M IE+ +++F Y +++SL DV + I+G +G+GKST L GL+
Sbjct: 1 MPTIELNHLTFTYPE-RSFSL-DVEDKHFADPMVAIVGQNGAGKSTLFKLLTGLLTPQT- 57
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G + +DG N + E +VG+ FQNPD QLFN TV EV + + + + + +
Sbjct: 58 ----GVIKIDGENFNDLKPVEKLLKVGITFQNPDDQLFNPTVQREVEWNVAQVMDDHDTI 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
RR ALK V L DK E P +LS E++ L++A+VL + P + + DEP LD R
Sbjct: 114 TRRALAALKRVGLDDKTAENPYDLSLSERKLLSVATVLAVDPAIYLFDEPMMSLDWESRR 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
++ ++ L + ++ + H+ D++ + + V + G+ G P E+F + E ++R
Sbjct: 174 KLTAIFHQL-ADSGHQVVTITHDMDWVAAEFESVYVMEHGKFGFAGSPRELFSDHELVQR 232
Query: 241 IGIRIPTRV 249
+G+ +P R+
Sbjct: 233 VGL-LPPRI 240
>gb|AAG18995.1| (AE004999) phosphate transport ATP-binding; PstB2 [Halobacterium
sp. NRC-1]
Length = 281
Score = 120 bits (299), Expect = 1e-26
Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 14/241 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+I ++ YG+ +A L V++++ + + IIGPSG GKSTF +N +
Sbjct: 35 VIRARDLDVFYGSERA--LESVDIDIPEQQVTAIIGPSGCGKSTFLRCINRMNDRIDAAR 92
Query: 63 FEGNVFVDGLNTREHSV--AELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
+G++ + G N + +V L RVG+VFQ P+ F ++ + VA+ LE VE +
Sbjct: 93 IDGDLTLRGTNVYDAAVDPVALRRRVGMVFQEPNP--FPKSIYDNVAYGLEIQDVEGDHD 150
Query: 121 WRRIRWALKLVKLWDK----REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ +L+ LWD+ + LSGG++QRL IA + P+VL++DEP S LDP
Sbjct: 151 -EIVEQSLRRAALWDEVSHQLDSSGVALSGGQQQRLCIARAIAPDPEVLLMDEPASALDP 209
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVF-DGGRVVMEGKPEEVFENV 235
+ +V L+ L E+ T+++V HN +D+ VF GG++V G +++FEN
Sbjct: 210 VATSQVEDLIEEL--AEEYTVVIVTHNMQQAARISDKTAVFLTGGKLVEFGDTDQIFENP 267
Query: 236 E 236
E
Sbjct: 268 E 268
>gb|AAD22041.1| (AF118229) ATP-binding cassette protein PstB [Streptococcus
pneumoniae]
Length = 250
Score = 120 bits (298), Expect = 2e-26
Identities = 76/241 (31%), Positives = 134/241 (55%), Gaps = 13/241 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M V ++ YG+ +A L+++++ + + + +IGPSG GKSTF TLN + +
Sbjct: 1 MGTFSVRHLDLFYGDFQA--LKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPS 58
Query: 61 GEFEGNVFVD--GLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGV-ER 117
EG V +D + + + ++ +L RVG+VFQ P+ F M++ + VA+ G+ ++
Sbjct: 59 CHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNP--FAMSIYDNVAYGPRTHGIRDK 116
Query: 118 EEMWRRIRWALKLVKLW----DKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQ 173
+++ + +LK +W D ++ +LSGG++QRL IA L ++P +L++DEPTS
Sbjct: 117 KQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSA 176
Query: 174 LDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
LDP+ ++ L++ L K+ TII+V HN +D+ F G + G +VF
Sbjct: 177 LDPISTLKIEDLIQQLKKD--YTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFT 234
Query: 234 N 234
N
Sbjct: 235 N 235
>pir||G72578 probable ABC transporter ATP-binding protein APE1911 - Aeropyrum
pernix (strain K1) >gi|5105603|dbj|BAA80916.1|
(AP000062) 284aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 284
Score = 120 bits (298), Expect = 2e-26
Identities = 87/243 (35%), Positives = 129/243 (52%), Gaps = 20/243 (8%)
Query: 24 VNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNT-REHSVAEL 82
V+L V +GE +G++GP+G+GK+T GL G V ++GL+ RE E
Sbjct: 13 VDLEVGRGEAVGLVGPNGAGKTTLIKVSLGLARRD-----GGRVLLNGLDPWREPRARE- 66
Query: 83 STRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREEFPP 142
VG+VF+ P+ +M V+E + A +G R+ WA++ L + P
Sbjct: 67 --GVGVVFERPNLPS-SMPVVEFLESAAAIIGSSPS----RVDWAIRAAGLEGHEWKTFP 119
Query: 143 NLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEH 202
LS G KQR AIA L+ +P+ LV DEPTS LDPL R EVL L+ LN+E +++++ H
Sbjct: 120 QLSAGLKQRAAIAHALLGEPRFLVADEPTSNLDPLERREVLRLLARLNREHGLSLLVSSH 179
Query: 203 NTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRV-----KIGYELKK 257
LL A RI V GGR+ EG PE++F L R+ P+ +G+E ++
Sbjct: 180 VIVELLRVATRIYVLAGGRLAAEGSPEDLFRRAG-LARLRTSNPSLAAELLRSLGFEARE 238
Query: 258 RGI 260
G+
Sbjct: 239 DGL 241
>pir||E70141 oligopeptide transport ATP-binding protein oppD - Lyme disease
spirochete >gi|2281462|gb|AAC46287.1| (AF000366)
oligopeptide permease homolog D [Borrelia burgdorferi]
>gi|2688243|gb|AAC66722.1| (AE001140) oligopeptide ABC
transporter, ATP-binding protein (oppD) [Borrelia
burgdorferi]
Length = 290
Score = 120 bits (297), Expect = 2e-26
Identities = 77/253 (30%), Positives = 133/253 (52%), Gaps = 11/253 (4%)
Query: 2 NIIEVEN--VSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
NI+E++N + F+ ++ + + +VNL+VK+GE I+G SGSGKS + + L+P
Sbjct: 5 NILEIKNLTIEFRLKHTTIHPVSNVNLSVKRGEIRAIVGESGSGKSVTSMAILKLLPELT 64
Query: 60 NGEFEGNVFVDGLNTREHSVAEL----STRVGLVFQNPDSQLFNM----TVLEEVAFALE 111
G + + + + S EL ++ ++FQ+P + L T LEE +
Sbjct: 65 TVYKSGEILFENQDLLKLSEKELLKIRGNKISMIFQDPMTSLNPFLRISTQLEETIILHQ 124
Query: 112 NLGV-EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEP 170
LG E +E + + +V ++ + FP SGG +QR+ IA L P +L+ DEP
Sbjct: 125 GLGKKEAKEKAIEMLKTVGVVNAEERIKHFPHQFSGGMRQRVMIAMALSCHPSLLIADEP 184
Query: 171 TSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEE 230
T+ LD +E++L L++ L+K+ + I + H+ + E D + V G++V EG EE
Sbjct: 185 TTALDVTIQEQILLLIKNLSKKFNTSTIFITHDLAVVAEICDTVSVMYQGKIVEEGTVEE 244
Query: 231 VFENVEFLERIGI 243
+F N + IG+
Sbjct: 245 IFNNPKHPYTIGL 257
>pir||D69763 ferrichrome ABC transporter (ATP-binding p) homolog yclP - Bacillus
subtilis >gi|1805452|dbj|BAA09014.1| (D50453) homologue
of iron dicitrate transport ATP-binding protein FecE of
E. coli [Bacillus subtilis] >gi|2632683|emb|CAB12190.1|
(Z99106) similar to ferrichrome ABC transporter
(ATP-binding protein) [Bacillus subtilis]
Length = 252
Score = 119 bits (296), Expect = 3e-26
Identities = 78/246 (31%), Positives = 128/246 (51%), Gaps = 10/246 (4%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++EV NVS +YG L + ++ ++KG+ IGP+G+GKST ++ LI
Sbjct: 1 MVEVRNVSKQYGGKVV--LEETSVTIQKGKITSFIGPNGAGKSTLLSIMSRLIKKD---- 54
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFAL--ENLGVEREEM 120
G +++DG EL+ ++ ++ Q + +T+ + V+F + G EE
Sbjct: 55 -SGEIYIDGQEIGACDSKELAKKMSILKQANQINI-RLTIKDLVSFGRFPYSQGRLTEED 112
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
W I AL +KL D ++++ LSGG+ QR IA V+ + LDEP + LD
Sbjct: 113 WVHINQALSYMKLEDIQDKYLDQLSGGQCQRAFIAMVIAQDTDYIFLDEPLNNLDMKHSV 172
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
E++ L++ L +E TI++V H+ +F ++D IV GR+V EG PEE+ E E
Sbjct: 173 EIMKLLKRLVEELGKTIVIVIHDINFASVYSDYIVALKNGRIVKEGPPEEMIETSVLEEI 232
Query: 241 IGIRIP 246
+ IP
Sbjct: 233 YDMTIP 238
>sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
Length = 371
Score = 119 bits (295), Expect = 4e-26
Identities = 77/232 (33%), Positives = 131/232 (56%), Gaps = 10/232 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++++NV+ +G + +D+NL++ +GEF+ +GPSG GKST + GL +
Sbjct: 1 MASVQLQNVTKAWG--EVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETIT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++F+ + AE VG+VFQ+ + +++V E ++F L+ G ++E +
Sbjct: 57 ---SGDLFIGEKRMNDTPPAERG--VGMVFQSY-ALYPHLSVAENMSFGLKPAGAKKEVI 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ ++++L + P LSGG++QR+AI LV +P V +LDEP S LD R
Sbjct: 111 NQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRV 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
++ + L+K T+I V H+ + AD+IVV D GRV GKP E++
Sbjct: 171 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222
>sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YTMN
>gi|7442519|pir||F69641 histidine transport protein hisP
- Bacillus subtilis >gi|2293251|gb|AAC00329.1|
(AF008220) putative amino acid transporter [Bacillus
subtilis] >gi|2635399|emb|CAB14894.1| (Z99118) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis] >gi|2635418|emb|CAB14912.1| (Z99119) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis]
Length = 259
Score = 119 bits (295), Expect = 4e-26
Identities = 95/256 (37%), Positives = 141/256 (54%), Gaps = 31/256 (12%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
+IE++N+ ++G + L+ +NL V+KGE + IIGPSGSGK+TF LN L
Sbjct: 1 MIEIKNIHKQFGIH--HVLKGINLTVRKGEVVTIIGPSGSGKTTFLRCLNLL-----ERP 53
Query: 63 FEGNVFVDG--LNTREHSVAE---LSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVE 116
EG + + +N R S E L + +VFQ LF + TV+E V +E L +
Sbjct: 54 DEGIISIHDKVINCRFPSKKEVHWLRKQTAMVFQQ--YHLFAHKTVIENV---MEGLTIA 108
Query: 117 REEMWRRIRWA-----LKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPT 171
R+ M ++ +A L+ V L DK +P LSGG+KQR+ IA L + P VL+ DEPT
Sbjct: 109 RK-MRKQDAYAVAENELRKVGLQDKLNAYPSQLSGGQKQRVGIARALAIHPDVLLFDEPT 167
Query: 172 SQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+ LDP EVL ++ + K T+I+V H +F +D++V D G +V +G PEEV
Sbjct: 168 AALDPELVGEVLEVMLEIVK-TGATMIVVTHEMEFARRVSDQVVFMDEGVIVEQGTPEEV 226
Query: 232 FENV------EFLERI 241
F + +FL R+
Sbjct: 227 FRHTKKDRTRQFLRRV 242
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 119 bits (295), Expect = 4e-26
Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 12/222 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSI 59
M IEV ++ + + + +L VNL V GEF+ I+GPSGSGKST + L +P S
Sbjct: 1 MKAIEVRDLRKSFDSGRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVPDS- 59
Query: 60 NGEFEGNVFVDGLN-TREHSVAEL-STRVGLVFQNPDSQLFNMTVLEEVAFALENLGVER 117
G + V G + +RE ++ L + +G VFQ + + N+T LE V + V+
Sbjct: 60 -----GTICVAGRDLSRERDLSRLRAEEIGFVFQL-HNLIPNLTALENVEIPM--FAVKH 111
Query: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
E M R L+ V L DK P LSGGE+QR+AIA L P +++ DEPT LD
Sbjct: 112 ENMEERAMELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSR 171
Query: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDG 219
+ VL +R L ++E +T+++V H D + I + DG
Sbjct: 172 TSQRVLRKLRELQEDEGVTLVVVTHEPDVAAMASRTIRILDG 213
>pir||MMECMK inner membrane protein malK - Escherichia coli
>gi|409797|gb|AAC43129.1| (U00006) cytoplasmic membrane
protein for maltose uptake [Escherichia coli]
>gi|1790467|gb|AAC77005.1| (AE000476) ATP-binding
component of transport system for maltose [Escherichia
coli K12]
Length = 371
Score = 118 bits (294), Expect = 5e-26
Identities = 77/232 (33%), Positives = 131/232 (56%), Gaps = 10/232 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++++NV+ +G + +D+NL++ +GEF+ +GPSG GKST + GL +
Sbjct: 1 MASVQLQNVTKAWG--EVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETIT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++F+ + AE VG+VFQ+ + +++V E ++F L+ G ++E +
Sbjct: 57 ---SGDLFIGEKRMNDTPPAERG--VGMVFQSY-ALYPHLSVAENMSFGLKLAGAKKEVI 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ ++++L + P LSGG++QR+AI LV +P V +LDEP S LD R
Sbjct: 111 NQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRV 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
++ + L+K T+I V H+ + AD+IVV D GRV GKP E++
Sbjct: 171 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222
>gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]
Length = 336
Score = 118 bits (294), Expect = 5e-26
Identities = 71/236 (30%), Positives = 136/236 (57%), Gaps = 16/236 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+++ + +++ +G++K L++++L V + E + ++G SG GK+T + GL+P
Sbjct: 1 MSVLTINHLNLNFGSTKV--LQNLHLAVNQNEIICLLGASGCGKTTLLKAIAGLLPIE-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLG-VERE 118
+G++ + G + +V E ++GL+FQ D LF ++TV + + F L L V+++
Sbjct: 57 ---QGDIHLAGECLKSKAVEE--RQIGLIFQ--DYALFPHLTVADNIQFGLSKLPKVQQK 109
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
+ ++ L +V L FP LSGG++QR+AIA L +P++L+LDEP S +D
Sbjct: 110 AITEKM---LSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFSNIDSQT 166
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
R ++ ++ + K + + I V H+ + AD+I V D G+++ GKP E++ +
Sbjct: 167 RYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNELYHS 222
>gb|AAD10861.1| (U60994) orf k; putative ATP-binding cassette transport system;
similar to ATP-binding protein and to components of ABC
transport systems [Leuconostoc lactis]
Length = 247
Score = 118 bits (294), Expect = 5e-26
Identities = 75/239 (31%), Positives = 135/239 (56%), Gaps = 9/239 (3%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+++++ +S YG + L ++N ++ K + ++GPSGSGKST TLNGL P
Sbjct: 5 DLVKISKLSKFYGKKQV--LHNINFSIPKNKVTVLLGPSGSGKSTLIRTLNGLEPFQAGA 62
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVER-EE 119
N +D + ++ ++ ++G+VFQ+ D LF NM+V++ V + + E
Sbjct: 63 IEVFNQVID--SHTKNGWRDIRGKIGMVFQSYD--LFPNMSVIKNVTLGPVKVQKRKVSE 118
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
+ R LK V L + +P NLSGG+KQR+AI L+++P +++ DE T+ LDP
Sbjct: 119 VLTAARALLKEVGLAEYENAYPRNLSGGQKQRVAIVRALILRPSLILFDEITASLDPEMV 178
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
VL +++ L + K+T+++V H +F + AD++V + G++V G ++ F+ + L
Sbjct: 179 RGVLEILKKL-ADGKLTMVVVTHEMNFAQQIADQVVFLEEGKIVEIGGGQDFFDQPKTL 236
>gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC18650.1|
(AF242881) motB [Agrobacterium tumefaciens]
Length = 394
Score = 118 bits (293), Expect = 7e-26
Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 18/240 (7%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSINGE 62
I + V+ YG K S D+NL+++ GEF+ ++GPSGSGK+T +TL G I P + +
Sbjct: 44 ISIAGVTKSYGPVKVLS--DINLHIRSGEFMTLLGPSGSGKTTLLMTLAGFIRPDFGSLK 101
Query: 63 F-EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
F E V + + R VG++FQN LF +M+V +A+ L+ G +RE +
Sbjct: 102 FGEEEVILRAPHLRG---------VGMMFQN--YALFPHMSVEANIAYPLKIRGEDRETI 150
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+R L+ V+L LSGG++QR+A+A +V KPK+L++DEP S LD RE
Sbjct: 151 KARVRDVLETVQLGGYGSRRISELSGGQRQRIALARAIVFKPKILLMDEPLSALDKNLRE 210
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE--NVEFL 238
+ +R ++++ +T +LV H+ L +DRI V G++ E ++ N EF+
Sbjct: 211 LMQLELRTMHEQLGMTTVLVTHDQREALTMSDRIAVLRNGKIAQIDTSETLYSEPNSEFV 270
>sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN Y4FO
>gi|2182398|gb|AAB91671.1| (AE000073) Y4fO [Rhizobium
sp. NGR234]
Length = 339
Score = 118 bits (292), Expect = 9e-26
Identities = 81/256 (31%), Positives = 132/256 (50%), Gaps = 13/256 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
+RD+NL+V G F+ ++GPSGSGKS+ T+ GL+P G V ++G + ++
Sbjct: 28 VRDLNLDVADGAFVSLLGPSGSGKSSVLRTIAGLLP-----ALGGRVLLEGQDIT--ALP 80
Query: 81 ELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREE 139
VG+VFQN LF M+ E +AFAL + E+ RR+ ++ + D+ ++
Sbjct: 81 PERRNVGIVFQN--YALFPTMSAFENIAFALRVAKKSKAEVERRVGEVAEMAGISDQLDK 138
Query: 140 FPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIIL 199
P N+SGG++QR+AIA LV +VL+ DEP S LD R + ++ L E T I
Sbjct: 139 KPANMSGGQQQRVAIARALVTGSRVLLFDEPLSNLDAKVRAAMRKEIKRLQSELGFTAIF 198
Query: 200 VEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE---FLERIGIRIPTRVKIGYELK 256
V H+ + L +D IVV + G++ G ++ E IG+ + L
Sbjct: 199 VTHDQEDALTMSDLIVVLNHGKIEQIGDGRTLYRKPATPFICEFIGVSNELAPPLAARLL 258
Query: 257 KRGITRRAVLSYEEII 272
+ R+ L +E+++
Sbjct: 259 GYDVKGRSFLRHEDVL 274
>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445942|pir||B69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 228
Score = 118 bits (292), Expect = 9e-26
Identities = 80/229 (34%), Positives = 129/229 (55%), Gaps = 15/229 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLR---DVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPH 57
M ++E+ NV +K ++ Y +R V+++V++GEF+ I+GPSGSGKST L L G +
Sbjct: 1 MKVVELRNV-YKIYRTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKSTL-LNLIGCLDK 58
Query: 58 SINGEFEGNVFVDGLNT---REHSVAELST-RVGLVFQNPDSQLFNMTVLEEVAFALENL 113
GE V ++G+ T ++ + EL +G +FQ + + +T LE V +
Sbjct: 59 PTEGE----VLINGVETSSLNDNRLTELRRDTIGFIFQTYNL-IPTLTALENVELPMIFK 113
Query: 114 GVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQ 173
GV R E R + LK V L + P +SGG++QR+AIA L PK+L+ DEPT
Sbjct: 114 GVGRREREERAKELLKNVGLEKEMNRKPNEMSGGQQQRVAIARALANNPKILLCDEPTGN 173
Query: 174 LDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV 222
LD E+V+ ++R N+ +T+ILV H+ L ++ DR++ G++
Sbjct: 174 LDTKSGEQVMEIIRHQNEVLGVTVILVTHDPS-LAKYGDRVIRLRDGKI 221
>pir||A64455 methyl coenzyme M reductase (EC 1.8.-.-) component A2 -
Methanococcus jannaschii >gi|1592327|gb|AAB99247.1|
(U67565) methyl coenzyme M reductase system, component
A2 (atwA) [Methanococcus jannaschii]
Length = 539
Score = 117 bits (291), Expect = 1e-25
Identities = 77/244 (31%), Positives = 134/244 (54%), Gaps = 20/244 (8%)
Query: 2 NIIEVENVSFKYGNSKAYSLR---DVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
+II++ENVS Y + + ++ +V LN+++ E G++G SG+GK+T + G++P S
Sbjct: 286 DIIKLENVSKHYCSVERGVIKAVDNVTLNIREREIFGLVGTSGAGKTTLAKIIAGVLPPS 345
Query: 59 INGEF---EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLG 114
G++ G+ +VD +G++FQ + L+ + T+LE + E +G
Sbjct: 346 -KGKYWFRVGDEWVDMTKPGPMGRGRAKRYIGILFQ--EYALYPHRTILENLT---EAIG 399
Query: 115 VEREEMWRRIRWALKLVKLWDKREE-------FPPNLSGGEKQRLAIASVLVMKPKVLVL 167
+E + + R++ LV + EE +P LS GE+ R A+A VL+ +P+V++L
Sbjct: 400 LELPDEFARMKAVYTLVSVGFSEEEAEEILDKYPHELSVGERHRCALAQVLIKEPRVVIL 459
Query: 168 DEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGK 227
DEPT +DP+ R V + E + T I+V H+ DF+L DR + G+++ GK
Sbjct: 460 DEPTGTMDPITRNTVAESIHKSRIELEQTYIIVSHDMDFVLNVCDRAGLMRNGKLIKVGK 519
Query: 228 PEEV 231
PEE+
Sbjct: 520 PEEI 523
Score = 108 bits (267), Expect = 8e-23
Identities = 77/271 (28%), Positives = 131/271 (47%), Gaps = 35/271 (12%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL------ 54
M ++EV+NV+ K+G+ L++++ +++GE LGI+G SG+GKS L G+
Sbjct: 6 MMLLEVKNVTKKFGDKVV--LKNISFTLEEGESLGILGKSGAGKSVLLHMLRGMDGYEPT 63
Query: 55 ------------------------IPHSINGEFEGNVFVDGLNTREHSVAELSTRVGLVF 90
P G + VD N ++++ L ++ ++
Sbjct: 64 EGQIIYHVSYCEKCGYVDVPSKAGTPCKKCGNELKKIEVDFWNDKKYTY-NLKRKIAIML 122
Query: 91 QNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQ 150
Q + TVLE + AL G E +E +K+VKL + +LSGGEKQ
Sbjct: 123 QRTFALYGEKTVLENILEALHQAGYEGKEAIDMALKLIKMVKLEHRITHIARDLSGGEKQ 182
Query: 151 RLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEH 210
R+ +A + +P + + DEPT LDP + V S ++ L + KI++IL H + + E
Sbjct: 183 RVVLARQIAKEPFIFLADEPTGTLDPQTAKLVHSALKELVIKNKISLILTSHWPEVIAEL 242
Query: 211 ADRIVVFDGGRVVMEGKPEEVFENVEFLERI 241
++ + D G ++MEG EEV +F+E +
Sbjct: 243 TEKAIWLDKGEIIMEGTSEEVVN--KFMETV 271
>gi|11498986 branched-chain amino acid ABC transporter, ATP-binding protein
(braF-4) {Methanococcus jannasch [Archaeoglobus
fulgidus] >gi|7445945|pir||E69423 branched-chain amino
acid ABC transporter, ATP-binding protein (braF-4)
homolog - Archaeoglobus fulgidus
>gi|2649182|gb|AAB89855.1| (AE001008) branched-chain
amino acid ABC transporter, ATP-binding protein (braF-4)
{Methanococcus jannasch [Archaeoglobus fulgidus]
Length = 274
Score = 117 bits (291), Expect = 1e-25
Identities = 88/256 (34%), Positives = 134/256 (51%), Gaps = 30/256 (11%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M I++ +N+S + KA L VN+ V+KG +IGP+GSGK+TF T++G
Sbjct: 18 MKILQTQNLSKFFDGLKA--LNRVNIGVEKGSITLVIGPNGSGKTTFINTVSGFYRAD-- 73
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLV--FQNPDSQLFNMTVLEEVAFALENLGV--- 115
EG VF +G + E+S R+G+V FQ P L MTVLE + A E G
Sbjct: 74 ---EGKVFFEGKDITNKPPHEIS-RLGIVRTFQIPQP-LKKMTVLENLLIAPEGYGERIF 128
Query: 116 ---------EREEMWR---RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPK 163
E EE+ RI LKL LWD + NLSGG+ + L +A ++ K
Sbjct: 129 HSVSGRWLKEEEEIVEKAFRILEFLKLDHLWDSEAQ---NLSGGQLKLLEVARAMMKDAK 185
Query: 164 VLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVV 223
+L++DEP + ++P+ +L L K+ ++ ++VEH D +L++ D I V G V+
Sbjct: 186 LLIMDEPIAGVNPVLSHSMLERFVEL-KKMGVSFLIVEHRLDIVLKYTDHIYVMANGSVI 244
Query: 224 MEGKPEEVFENVEFLE 239
EGK E++ N + +E
Sbjct: 245 AEGKEEDILNNPKVVE 260
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 117 bits (290), Expect = 2e-25
Identities = 85/260 (32%), Positives = 142/260 (53%), Gaps = 17/260 (6%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
I+E + +S K+G K YS+R++ ++VKKG+ G +GP+G+GKST + GL+ H GE
Sbjct: 6 ILETKKLSKKFG--KEYSVRNLTISVKKGDIFGFLGPNGAGKSTTMKMILGLL-HPTEGE 62
Query: 63 FEGNVFVDGL-NTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
+ VF L N+ ++SV + VG + + P S N++ LE + + L + +
Sbjct: 63 VK--VFGKKLDNSVKNSVLK---DVGCLIEEP-SFYPNLSGLENLKLVQKLLNLP----Y 112
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
I L +VKL D++ + N S G KQRL IA L+ PK+L+LDEPT+ LDP G E
Sbjct: 113 HNIEKVLNIVKLEDQKNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPTGIRE 172
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEF---L 238
+ L++ L ++ IT+++ H + + A+ + + G ++ EG+ ++ E F
Sbjct: 173 IRELIKSLPEKYGITVLISSHLLSEIEQIANTVAIIKKGELLYEGELSKLEEQPIFEIQT 232
Query: 239 ERIGIRIPTRVKIGYELKKR 258
I +GY +KK+
Sbjct: 233 NLINQSFEVLQGLGYTVKKQ 252
>pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AAC07884.1|
(AE000776) ABC transporter [Aquifex aeolicus]
Length = 251
Score = 117 bits (290), Expect = 2e-25
Identities = 85/244 (34%), Positives = 131/244 (52%), Gaps = 16/244 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M+++EV+N++ Y + L DV+ VK GE L I+G SGSGKS+ T+ L+P
Sbjct: 1 MSLLEVKNLNLWYREKQV--LFDVSFEVKIGEILCIVGESGSGKSSILFTILRLLPPY-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPD---SQLFNMTVLEEVAFALENL 113
G+V G + S E+ + VG+VFQ P LF + E + L +
Sbjct: 57 ARVSGSVKFLGRELLKLSEREMKSIRGKEVGMVFQEPSLYLDPLFTVGSQIEETY-LSHF 115
Query: 114 GVEREEMWRRIRWALK---LVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEP 170
R E + A+K + K +K +P LSGG KQR+ IA+ +V +PK+++ DEP
Sbjct: 116 KAGRREAYEACIKAMKKAGIPKPEEKYRMYPHQLSGGLKQRVCIANAIVCEPKLVLADEP 175
Query: 171 TSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEE 230
T+ LD + +L+L R + KEE +IL+ H+ + E DR++V G+VV EG E
Sbjct: 176 TTALDVSVQRRILALFRNM-KEEGKAVILITHDFGVVAEVGDRVIVLKDGKVVEEGDVFE 234
Query: 231 VFEN 234
+F+N
Sbjct: 235 IFDN 238
>pir||D64507 methyl coenzyme M reductase system, component A2 homolog -
Methanococcus jannaschii
Length = 558
Score = 117 bits (290), Expect = 2e-25
Identities = 94/300 (31%), Positives = 141/300 (46%), Gaps = 66/300 (22%)
Query: 3 IIEVENVSFKY---GNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHS 58
II+V NVS +Y + +LR+V+ +VK+GE L IIGPSG GK+ + GL +P
Sbjct: 257 IIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVGKTVIMRLMAGLELPD- 315
Query: 59 INGEFEGNVFVDGLNTREHSVA--ELSTRVGLV---FQNPDSQLFNMTVLEEVAF----A 109
EG + VDG++ + EL R+G++ F P Q + + A
Sbjct: 316 -----EGKIIVDGIDITNYGWERIELRKRIGIMHQEFSLPYYQTVENLLKYRLGLKGEKA 370
Query: 110 LENLGVEREEMWRRIRWALKLVKLWDKREE-------------------FPP-------- 142
+ + + EE+ + L +L D E FPP
Sbjct: 371 IAHAKAKAEELGLSPKIVDALYQLIDVPESERISKLQKMGLTEDIIYKLFPPVVESFEPE 430
Query: 143 ------------------NLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLS 184
LSGG+K R+A+A L+ KPK+L LDEP LDP+ +V +
Sbjct: 431 EILEALDLGKDILKKKVIELSGGQKVRVAMALQLITKPKILFLDEPFGDLDPITLRDVAN 490
Query: 185 LVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIR 244
++++N+ TI+LV H +F+ E +DR ++ D R+VMEG PEEV E EF+ R R
Sbjct: 491 YLKIINERFGTTIVLVSHCVEFIKEISDRAILLDENRLVMEGNPEEVCE--EFIRRSNAR 548
Score = 108 bits (266), Expect = 1e-22
Identities = 84/251 (33%), Positives = 129/251 (50%), Gaps = 22/251 (8%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++V+N++ KYG+ KA L V+ KKGE LGI+G SG+GKST L G + +
Sbjct: 4 MITVKVKNLTKKYGDFKA--LDKVSFEAKKGEILGIVGKSGAGKSTLIRILRGSLDYD-- 59
Query: 61 GEFEGNVFVDGL--NTREHSVAELSTRVGL----VFQNPDSQLFNMTVLEEVAFALENLG 114
EG V + G N +E + L L V N +L+ + + LE
Sbjct: 60 ---EGEVEILGRKDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEE-- 114
Query: 115 VEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLA----IASVLVMKPKVLVLDEP 170
E EE + LKLV L K++ F LSGGEKQRL IA + VL+LDEP
Sbjct: 115 -EWEEYEKTAIEILKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEP 173
Query: 171 TSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEE 230
+ P ++++L +++ + + IT+I+ H + DR+++ + G+V M+G EE
Sbjct: 174 ATMACPASKQKLLDVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEE 233
Query: 231 VFENVEFLERI 241
V EFL+++
Sbjct: 234 VLN--EFLKKM 242
>gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, component A2-like
[Methanococcus jannaschii]
Length = 555
Score = 117 bits (290), Expect = 2e-25
Identities = 94/300 (31%), Positives = 141/300 (46%), Gaps = 66/300 (22%)
Query: 3 IIEVENVSFKY---GNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHS 58
II+V NVS +Y + +LR+V+ +VK+GE L IIGPSG GK+ + GL +P
Sbjct: 254 IIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVGKTVIMRLMAGLELPD- 312
Query: 59 INGEFEGNVFVDGLNTREHSVA--ELSTRVGLV---FQNPDSQLFNMTVLEEVAF----A 109
EG + VDG++ + EL R+G++ F P Q + + A
Sbjct: 313 -----EGKIIVDGIDITNYGWERIELRKRIGIMHQEFSLPYYQTVENLLKYRLGLKGEKA 367
Query: 110 LENLGVEREEMWRRIRWALKLVKLWDKREE-------------------FPP-------- 142
+ + + EE+ + L +L D E FPP
Sbjct: 368 IAHAKAKAEELGLSPKIVDALYQLIDVPESERISKLQKMGLTEDIIYKLFPPVVESFEPE 427
Query: 143 ------------------NLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLS 184
LSGG+K R+A+A L+ KPK+L LDEP LDP+ +V +
Sbjct: 428 EILEALDLGKDILKKKVIELSGGQKVRVAMALQLITKPKILFLDEPFGDLDPITLRDVAN 487
Query: 185 LVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIR 244
++++N+ TI+LV H +F+ E +DR ++ D R+VMEG PEEV E EF+ R R
Sbjct: 488 YLKIINERFGTTIVLVSHCVEFIKEISDRAILLDENRLVMEGNPEEVCE--EFIRRSNAR 545
Score = 108 bits (266), Expect = 1e-22
Identities = 84/251 (33%), Positives = 129/251 (50%), Gaps = 22/251 (8%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++V+N++ KYG+ KA L V+ KKGE LGI+G SG+GKST L G + +
Sbjct: 1 MITVKVKNLTKKYGDFKA--LDKVSFEAKKGEILGIVGKSGAGKSTLIRILRGSLDYD-- 56
Query: 61 GEFEGNVFVDGL--NTREHSVAELSTRVGL----VFQNPDSQLFNMTVLEEVAFALENLG 114
EG V + G N +E + L L V N +L+ + + LE
Sbjct: 57 ---EGEVEILGRKDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEE-- 111
Query: 115 VEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLA----IASVLVMKPKVLVLDEP 170
E EE + LKLV L K++ F LSGGEKQRL IA + VL+LDEP
Sbjct: 112 -EWEEYEKTAIEILKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEP 170
Query: 171 TSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEE 230
+ P ++++L +++ + + IT+I+ H + DR+++ + G+V M+G EE
Sbjct: 171 ATMACPASKQKLLDVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEE 230
Query: 231 VFENVEFLERI 241
V EFL+++
Sbjct: 231 VLN--EFLKKM 239
>gb|AAB59057.1| (J01648) malK [Escherichia coli]
Length = 370
Score = 116 bits (289), Expect = 2e-25
Identities = 76/228 (33%), Positives = 128/228 (55%), Gaps = 10/228 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++++NV+ +G + +D+NL++ +GEF+ +GPSG GKST + GL +
Sbjct: 1 MASVQLQNVTKAWG--EVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETIT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G++F+ + AE VG+VFQ+ + +++V E ++F L+ G ++E +
Sbjct: 57 ---SGDLFIGEKRMNDTPPAERG--VGMVFQSY-ALYPHLSVAENMSFGLKPAGAKKEVI 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R+ ++++L + P LSGG++QR+AI LV +P V +LDEP S LD R
Sbjct: 111 NQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRV 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKP 228
++ + L+K T+I V H+ + AD+IVV D GRV GKP
Sbjct: 171 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKP 218
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 116 bits (289), Expect = 2e-25
Identities = 70/232 (30%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+ + ++N++ +G KA + +++L +K+G + ++GPSG GK+T + GL
Sbjct: 5 DFLVLKNITKAFG--KAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGL-----EN 57
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
G +F+DG + + S+ + +VFQ+ LF +M++ + V + L+ G+ +EE
Sbjct: 58 PTSGQIFIDGEDVTKSSIQNRD--ICIVFQS--YALFPHMSIGDNVGYGLKMQGIGKEER 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R++ AL+LV L + F +SGG++QR+A+A LV+KPKVL+ DEP S LD R
Sbjct: 114 AQRVKEALELVDLAGFEDRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRR 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
+ +R L + IT + V H+ +D ++V + G+++ + +E++
Sbjct: 174 SMREKIRELQQRLGITSLYVTHDQTEAFAVSDEVIVMNKGKIMQKAPAKELY 225
>sp|P02915|HISP_SALTY HISTIDINE TRANSPORT ATP-BINDING PROTEIN HISP >gi|72452|pir||QREBPT
histidine transport protein hisP - Salmonella
typhimurium >gi|47734|emb|CAA24662.1| (V01373) reading
frame of hisP [Salmonella typhimurium]
>gi|154128|gb|AAA75581.1| (J01805) hisP gene product
[Salmonella typhimurium] >gi|223502|prf||0809313D
protein hidP [Salmonella typhimurium]
Length = 258
Score = 116 bits (288), Expect = 3e-25
Identities = 87/252 (34%), Positives = 137/252 (53%), Gaps = 32/252 (12%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N + V ++ +YG + L+ V+L + G+ + IIG SGSGKSTF +N L S
Sbjct: 5 NKLHVIDLHKRYGGHEV--LKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPS--- 59
Query: 62 EFEGNVFVDGLNTR-------------EHSVAELSTRVGLVFQNPDSQLFN----MTVLE 104
EG + V+G N ++ + L TR+ +VFQ+ FN MTVLE
Sbjct: 60 --EGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQH-----FNLWSHMTVLE 112
Query: 105 EVAFA-LENLGVEREEMWRRIRWALKLVKLWDKRE-EFPPNLSGGEKQRLAIASVLVMKP 162
V A ++ LG+ + + R L V + ++ + ++P +LSGG++QR++IA L M+P
Sbjct: 113 NVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEP 172
Query: 163 KVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV 222
VL+ DEPTS LDP EVL +++ L +E K T+++V H F + ++ G++
Sbjct: 173 DVLLFDEPTSALDPELVGEVLRIMQQLAEEGK-TMVVVTHEMGFARHVSSHVIFLHQGKI 231
Query: 223 VMEGKPEEVFEN 234
EG PE+VF N
Sbjct: 232 EEEGDPEQVFGN 243
>pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permease From
Salmonella Typhimurium
Length = 262
Score = 116 bits (288), Expect = 3e-25
Identities = 87/252 (34%), Positives = 137/252 (53%), Gaps = 32/252 (12%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N + V ++ +YG + L+ V+L + G+ + IIG SGSGKSTF +N L S
Sbjct: 5 NKLHVIDLHKRYGGHEV--LKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPS--- 59
Query: 62 EFEGNVFVDGLNTR-------------EHSVAELSTRVGLVFQNPDSQLFN----MTVLE 104
EG + V+G N ++ + L TR+ +VFQ+ FN MTVLE
Sbjct: 60 --EGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQH-----FNLWSHMTVLE 112
Query: 105 EVAFA-LENLGVEREEMWRRIRWALKLVKLWDKRE-EFPPNLSGGEKQRLAIASVLVMKP 162
V A ++ LG+ + + R L V + ++ + ++P +LSGG++QR++IA L M+P
Sbjct: 113 NVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEP 172
Query: 163 KVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV 222
VL+ DEPTS LDP EVL +++ L +E K T+++V H F + ++ G++
Sbjct: 173 DVLLFDEPTSALDPELVGEVLRIMQQLAEEGK-TMVVVTHEMGFARHVSSHVIFLHQGKI 231
Query: 223 VMEGKPEEVFEN 234
EG PE+VF N
Sbjct: 232 EEEGDPEQVFGN 243
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 116 bits (288), Expect = 3e-25
Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 14/237 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++E++ V+ +YG A +RD++L+V++GE L ++GPSG GK+T L GL
Sbjct: 26 VLELDGVTKEYGAETA--VRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGL-----ERP 78
Query: 63 FEGNVFVDGLNTR--EHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
G + +D + VA +G+VFQ D LF +++V E VAF L + + +
Sbjct: 79 TGGTIELDAQRVAGPDTFVAAEDREIGIVFQ--DFALFPHLSVAENVAFGLTDR--DEDA 134
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
R+ L LV + + + LSGG++QR+A+A L +P +L+LDEP S LD R
Sbjct: 135 TAARVDEMLALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLR 194
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
E+ VR + KE +T + V H+ + L +DR+ V + G + G PE VFE+ E
Sbjct: 195 VEMREEVRRILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDPEGVFEHPE 251
>pir||C72576 probable glutamine transport ATP-binding protein APE1891 -
Aeropyrum pernix (strain K1) >gi|5105583|dbj|BAA80896.1|
(AP000062) 238aa long hypothetical glutamine transport
ATP-binding protein [Aeropyrum pernix]
Length = 238
Score = 116 bits (287), Expect = 4e-25
Identities = 83/225 (36%), Positives = 121/225 (52%), Gaps = 13/225 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSINGEFEGNVFVDGLNTREHSV 79
L+ V++++ GE L I+GPSGSGKST + L+ P S + F G VD +
Sbjct: 10 LKGVDVSLSYGEKLVIMGPSGSGKSTLLKAIPRLVEPDSGSIVFRG---VDVTRLSGSQL 66
Query: 80 AELSTRVGLVFQNPDSQLFNMTVLEEVAFALEN-LGVEREEMWRRIRWALKLVKLWDKRE 138
+ ++G + Q+ S +MTVL + + LE LG+ R + R L ++ + D
Sbjct: 67 RMVRRKIGYLPQSY-SLFPHMTVLRNITYPLEKALGLSRRDAEERAVKYLSMLGIEDLAH 125
Query: 139 EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSL---VRLLNKEEKI 195
P LSGG++QR A+A L M+P +L+LDEPTS LDP R +VL V L K
Sbjct: 126 RHPARLSGGQQQRAALARALAMEPDILLLDEPTSALDPESRADVLEALFRVATLGK---- 181
Query: 196 TIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
+I+V H DF ++ ADR+ + G V EGKP E+ E E + R
Sbjct: 182 AMIVVTHEADFAVKVADRMAFMEDGIVKEEGKPSELVEGSERVRR 226
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 116 bits (287), Expect = 4e-25
Identities = 71/245 (28%), Positives = 140/245 (56%), Gaps = 13/245 (5%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
II++ ++ +Y + Y++ ++L+++KGE G++GP+G+GK+T L + GL +
Sbjct: 5 IIKLNEITKRYDDH--YAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPT---- 58
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF--NMTVLEEVAFALENLGVEREEM 120
G V V G+++ ++ + E+ +VG + PD+ F +MT +E + + G+++ E
Sbjct: 59 -SGTVQVAGIDSTKYPI-EVKRKVGYL---PDNVGFYPDMTGMENLLYTASLNGIQKIEA 113
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R L+ V L + ++ S G KQRL +A VL+ P++++LDEPT +DP G
Sbjct: 114 IERANTLLEKVGLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVR 173
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
+ L L+R LN+ E +T++L H+ + + DR+ +F G+++ G +++ + + E
Sbjct: 174 DFLHLIRNLNQNENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHES 233
Query: 241 IGIRI 245
+ I +
Sbjct: 234 VVIHV 238
>sp|P46920|OPAA_BACSU GLYCINE BETAINE TRANSPORT ATP-BINDING PROTEIN OPUAA
>gi|2119776|pir||I40535 probable glycine betaine/proline
ABC transporter - Bacillus subtilis
>gi|984803|gb|AAC43455.1| (U17292) ATPase [Bacillus
subtilis]
Length = 418
Score = 115 bits (286), Expect = 5e-25
Identities = 79/227 (34%), Positives = 122/227 (52%), Gaps = 14/227 (6%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDG---LNTREH 77
+ + V GE I+G SGSGKST LN LI + GN+++DG N +
Sbjct: 49 VNQADFEVYDGEIFVIMGLSGSGKSTLVRMLNRLIEPTA-----GNIYIDGDMITNMSKD 103
Query: 78 SVAELSTR-VGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWD 135
+ E+ + + +VFQ LF + T+LE + LE GV+++E ++ +LKLV L
Sbjct: 104 QLREVRRKKISMVFQK--FALFPHRTILENTEYGLELQGVDKQERQQKALESLKLVGLEG 161
Query: 136 KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKI 195
++P LSGG +QR+ +A L P +L++DE S LDPL R+++ + L+
Sbjct: 162 FEHQYPDQLSGGMQQRVGLARALTNDPDILLMDEAFSALDPLIRKDMQDELLDLHDNVGK 221
Query: 196 TIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--EFLER 240
TII + H+ D L DRIV+ G +V G PEE+ N E++E+
Sbjct: 222 TIIFITHDLDEALRIGDRIVLMKDGNIVQIGTPEEILMNPSNEYVEK 268
>dbj|BAA08932.1| (D50453) glycine betain/L-proline transport ATPase [Bacillus
subtilis] >gi|2632584|emb|CAB12092.1| (Z99105) glycine
betaine ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 418
Score = 115 bits (286), Expect = 5e-25
Identities = 79/227 (34%), Positives = 122/227 (52%), Gaps = 14/227 (6%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDG---LNTREH 77
+ + V GE I+G SGSGKST LN LI + GN+++DG N +
Sbjct: 49 VNQADFEVYDGEIFVIMGLSGSGKSTLVRMLNRLIEPTA-----GNIYIDGDMITNMSKD 103
Query: 78 SVAELSTR-VGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWD 135
+ E+ + + +VFQ LF + T+LE + LE GV+++E ++ +LKLV L
Sbjct: 104 QLREVRRKKISMVFQK--FALFPHRTILENTEYGLELQGVDKQERQQKALESLKLVGLEG 161
Query: 136 KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKI 195
++P LSGG +QR+ +A L P +L++DE S LDPL R+++ + L+
Sbjct: 162 FEHQYPDQLSGGMQQRVGLARALTNDPDILLMDEAFSALDPLIRKDMQDELLDLHDNVGK 221
Query: 196 TIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--EFLER 240
TII + H+ D L DRIV+ G +V G PEE+ N E++E+
Sbjct: 222 TIIFITHDLDEALRIGDRIVLMKDGNIVQIGTPEEILMNPSNEYVEK 268
>gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protein [Bacillus
firmus]
Length = 366
Score = 115 bits (286), Expect = 5e-25
Identities = 74/233 (31%), Positives = 131/233 (55%), Gaps = 9/233 (3%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I+++N+ +K + ++ D NL++K EF+ +GPSG GKST + GL S
Sbjct: 4 IQLKNI-YKIYDGDVTAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDIS----- 57
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
+G++++ + R + VA + +VFQN + +M V E +AF L+ +++E+ RR
Sbjct: 58 KGDLYIG--DRRVNDVAPKDRDIAMVFQNY-ALYPHMNVYENMAFGLKLRKFKKDEIDRR 114
Query: 124 IRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVL 183
+R A K++ L + P +SGG++QR+A+ +V P+V ++DEP S LD R ++
Sbjct: 115 VRDAAKILGLEAMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMR 174
Query: 184 SLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
+ + L+K + T I V H+ + A RIV+ G + G P++V++N E
Sbjct: 175 AEITKLHKRLQTTTIYVTHDQTEAMTMATRIVIMKDGFIQQVGTPKDVYDNPE 227
>pir||D83281 histidine transport protein HisP PA2926 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949020|gb|AAG06314.1|AE004718_11 (AE004718)
histidine transport protein HisP [Pseudomonas
aeruginosa]
Length = 255
Score = 115 bits (286), Expect = 5e-25
Identities = 91/251 (36%), Positives = 137/251 (54%), Gaps = 32/251 (12%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++VE++ +YG+ + LR V+L KG+ + IIG SGSGKSTF +N L
Sbjct: 1 MYSLQVEDIHKRYGSHEV--LRGVSLRAGKGDVISIIGSSGSGKSTFLRCVNFL-----E 53
Query: 61 GEFEGNVFV--DGLNTREHSVAELS-----------TRVGLVFQNPDSQLFNM----TVL 103
G++ V + L TR ++ EL +R+ +VFQ+ FN+ TVL
Sbjct: 54 KPCAGHIRVGDEELRTRPGALGELRAADPRQLQRIRSRLAMVFQH-----FNLWSHLTVL 108
Query: 104 EEVAFALEN-LGVEREEMWRRIRWALKLVKLWDKRE-EFPPNLSGGEKQRLAIASVLVMK 161
E V N L + R++ R R L V L +K E ++P LSGG++QR+AIA L M+
Sbjct: 109 ENVVECPVNVLRMNRDDAVARARHYLAKVGLAEKVERQYPCELSGGQQQRVAIARALAME 168
Query: 162 PKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGR 221
P+V++ DEPTS LDP EVL +++ L EE T++LV H F + + ++ G
Sbjct: 169 PQVMLFDEPTSALDPELVGEVLKVMQQL-AEEGRTMVLVTHEMAFARQVSSHVIFLHQGV 227
Query: 222 VVMEGKPEEVF 232
+ EG P++VF
Sbjct: 228 IEEEGTPDQVF 238
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 115 bits (286), Expect = 5e-25
Identities = 66/227 (29%), Positives = 128/227 (56%), Gaps = 9/227 (3%)
Query: 20 SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSV 79
++++VN+ + GE +G++GP+G+GKST ++ LI + G + ++G+N H
Sbjct: 16 AVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPT-----SGEIKLNGINIISHP- 69
Query: 80 AELSTRVGLVFQNPDSQLFN-MTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKRE 138
++ +G+V Q + L+ ++ E + F ++ + + RI+ AL++V L D+++
Sbjct: 70 GDIRKILGVVPQ--ELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIVGLKDRQK 127
Query: 139 EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITII 198
+ SGG K+R+ IA+ L+ +PK+L+LDEPT +DP R +L VR LN+ E T++
Sbjct: 128 DLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNENEGTTVL 187
Query: 199 LVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRI 245
H + + + DR+ + D G ++ G EE+ + + I + +
Sbjct: 188 YTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLSILSTEDTIKVEL 234
>sp|P54954|YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YXEO
>gi|7442525|pir||A70076 ABC-type transport protein yxeO
- Bacillus subtilis >gi|1408500|dbj|BAA08331.1| (D45912)
homologous to GlnQ glutamine transport ATP-binding
protein of Bacillus stearothermophilus, belonging to the
ATP-binding cassette (ABC) family [Bacillus subtilis]
>gi|2636494|emb|CAB15984.1| (Z99124) similar to amino
acid ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 249
Score = 115 bits (285), Expect = 6e-25
Identities = 80/231 (34%), Positives = 126/231 (53%), Gaps = 13/231 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFE-GNVFVDGLNTREHSV 79
L ++L VK+GE + IIGPSGSGKST LN L+ G E G ++
Sbjct: 17 LDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLN-LLERPDQGLIEIGEAKLNAEKFTRKEA 75
Query: 80 AELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWA-LKLVKLWDKR 137
L + +VFQN + LF N T L+ + AL + + +RI LK V L K
Sbjct: 76 HRLRQQTAMVFQNYN--LFKNKTALQNITEALIVAQHKPRDEAKRIGMEILKQVGLEHKA 133
Query: 138 EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITI 197
+ +P +SGG++QR+ IA L + P ++LDEPTS LDP VL +++ + E++ T+
Sbjct: 134 DSYPITMSGGQQQRIGIARALAVNPHAILLDEPTSALDPELVTGVLQVIKSI-AEKQTTM 192
Query: 198 ILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE------FLERIG 242
I+V H F E AD+++ G ++ +G PEE+F++ + F++++G
Sbjct: 193 IIVTHEMAFAKEVADQVIFMADGHIIEQGTPEELFDHPKNERTKRFIKQVG 243
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 115 bits (285), Expect = 6e-25
Identities = 83/279 (29%), Positives = 135/279 (47%), Gaps = 28/279 (10%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSIN 60
+IIE E++ KY A ++ VNL V +G G++GP+G+GK+T L ++ P
Sbjct: 3 HIIETEDIKKKYDEFLA--VKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGR 60
Query: 61 GEFEG-NVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENL------ 113
G G ++ D RE +G+VFQ+ L+++ E+L
Sbjct: 61 GTVNGYDIVRDARKVRES--------IGIVFQS--------RALDDILTGREHLEMHAAL 104
Query: 114 -GVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTS 172
GV R+ RRI L+L+ L DK +E+ SGG K+RL I L+ P+VL LDEPT
Sbjct: 105 YGVPRDVRDRRIEEVLELIALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTL 164
Query: 173 QLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
LDP RE + + LN+EE +T++L H + + D + + G ++ P +
Sbjct: 165 GLDPQTRESIWRYIEKLNREEDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLK 224
Query: 233 ENVEFLERIGIRIPTRVKIGYELKKRGITRRAVLSYEEI 271
+ + I +R+ L+K+ + A L +E+
Sbjct: 225 RELG-ADTITVRVDRARGFHEILEKQDYVKEAYLMDDEV 262
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 115 bits (285), Expect = 6e-25
Identities = 72/234 (30%), Positives = 127/234 (53%), Gaps = 10/234 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M++++V ++ L+D++L++++GEF ++GPSG GK+T L G
Sbjct: 1 MSVVDVFKSYRNAAGAETPVLKDIDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQADSG 60
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREE 119
G + G+ V VFQ+ LF +++V + VAF L+ GV E
Sbjct: 61 AVVIGGRDMTGIPAHRRPV-------NTVFQS--YALFPHLSVADNVAFGLKQKGVRGAE 111
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
+ +R+ A++ V++ P LSGG++QR+A+A +V +P+VL+LDEP S LD R
Sbjct: 112 LRQRVERAMETVQIGQFGNRKPDQLSGGQRQRVALARAIVNQPEVLLLDEPLSALDLKLR 171
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+++ + L ++ IT + V H+ + L +DRI V + GR+ G+ E+++E
Sbjct: 172 KQLQVELSNLQEDLGITFVFVTHDQEEALVMSDRIAVMNQGRIEQLGRAEDLYE 225
>sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HISP
>gi|7442522|pir||H65002 histidine transport protein hisP
- Escherichia coli >gi|1788644|gb|AAC75366.1| (AE000319)
ATP-binding component of histidine transport
[Escherichia coli K12] >gi|1799677|dbj|BAA16143.1|
(D90861) histidine transport protein hisP [Escherichia
coli] >gi|1799687|dbj|BAA16152.1| (D90862) histidine
transport protein hisP [Escherichia coli]
Length = 257
Score = 115 bits (284), Expect = 8e-25
Identities = 86/252 (34%), Positives = 138/252 (54%), Gaps = 32/252 (12%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N + V ++ +YG + L+ V+L G+ + IIG SGSGKSTF +N L S
Sbjct: 4 NKLNVIDLHKRYGEHEV--LKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS--- 58
Query: 62 EFEGNVFVDGLNTR-------------EHSVAELSTRVGLVFQNPDSQLFN----MTVLE 104
EG++ V+G ++ + L TR+ +VFQ+ FN MTVLE
Sbjct: 59 --EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQH-----FNLWSHMTVLE 111
Query: 105 EVAFA-LENLGVEREEMWRRIRWALKLVKLWDKRE-EFPPNLSGGEKQRLAIASVLVMKP 162
V A ++ LG+ ++E R L V + ++ + ++P +LSGG++QR++IA L M+P
Sbjct: 112 NVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEP 171
Query: 163 KVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV 222
+VL+ DEPTS LDP EVL +++ L +E K T+++V H F + ++ G++
Sbjct: 172 EVLLFDEPTSALDPELVGEVLRIMQQLAEEGK-TMVVVTHEMGFARHVSTHVIFLHQGKI 230
Query: 223 VMEGKPEEVFEN 234
EG PE++F N
Sbjct: 231 EEEGAPEQLFGN 242
>sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK)
>gi|2338762|gb|AAC45769.1| (AF018073) sorbitol/mannitol
transport ATP-binding transport protein; SmoK
[Rhodobacter sphaeroides]
Length = 332
Score = 115 bits (284), Expect = 8e-25
Identities = 82/263 (31%), Positives = 137/263 (51%), Gaps = 12/263 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M I + NV ++G +A + ++L+++ GEF+ +GPSG GKST + GL S
Sbjct: 1 MGKITLRNVQKRFG--EAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLEDVS-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
+G + +DG + E A+ + +VFQ+ + +MTV + +AF L +E +E+
Sbjct: 57 ---DGQIMIDGRDATEMPPAKRG--LAMVFQSY-ALYPHMTVKKNIAFPLRMAKMEPQEI 110
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
RR+ A K++ L + + P LSGG++QR+AI +V +P + DEP S LD R
Sbjct: 111 ERRVSNAAKILNLTNYLDRRPGQLSGGQRQRVAIGRAIVREPAAFLFDEPLSNLDAALRV 170
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
+ + L++ + T+I V H+ + AD+IVV + GR+ G P ++ N L
Sbjct: 171 NMRLEITELHQSLETTMIYVTHDQVEAMTMADKIVVLNAGRIEQVGSPLTLYRNPANLFV 230
Query: 241 IGIRIPTRVKI--GYELKKRGIT 261
G ++ + G E K G T
Sbjct: 231 AGFIGSPKMNLIEGPEAAKHGAT 253
>gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445711|pir||E69497 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648557|gb|AAB89272.1| (AE000966) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 253
Score = 115 bits (284), Expect = 8e-25
Identities = 78/247 (31%), Positives = 139/247 (55%), Gaps = 13/247 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +IE +VSF Y +S+ S D+NL + +GEF+ ++GP+G+GKST + GL+ +
Sbjct: 1 MKVIEFYDVSFSYNSSEVLS--DLNLGIGRGEFVAVLGPNGAGKSTMLRLILGLLKPT-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQL-FNMTVLEEVAFALENLGVEREE 119
+G V V G N + + RVG + Q + L +TV + + L G + +
Sbjct: 57 ---KGTVKVLGYNAFDER-DKFVGRVGYLPQREEILLEAPLTVSQVIKLPLLARGKKVGD 112
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
++R AL +V L ++ LSGG++Q++ +A L+ P++L+LDEP + +D +
Sbjct: 113 S--KLREALSMVGLDGFGDKLFSELSGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQ 170
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLE 239
E+++ ++ ++ + K T++ V HN + LL + DR+V+ + R++ GKP EVF ++
Sbjct: 171 EKIVEVLAEMSSKGK-TVVAVVHNINPLLHNIDRVVLLN-RRIIAAGKPNEVFSEENIIK 228
Query: 240 RIGIRIP 246
G IP
Sbjct: 229 AYGTSIP 235
>pir||D72083 transport ATP binding protein - Chlamydophila pneumoniae (strain
CWL029) >gi|4376693|gb|AAD18557.1| (AE001624) Transport
ATP Binding Protein [Chlamydophila pneumoniae CWL029]
Length = 659
Score = 115 bits (284), Expect = 8e-25
Identities = 85/246 (34%), Positives = 129/246 (51%), Gaps = 22/246 (8%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N I ENVSF Y K + L++++ + KGE LGI+GP+GSGK+T L L S
Sbjct: 397 NTITFENVSFGYQEDK-HILKNLSFTLHKGEALGIVGPTGSGKTTLVKLLPRLYEVS--- 452
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
+G + +D L E++ L + V QNP LF TV + + +E E +
Sbjct: 453 --QGKILIDSLPITEYNKGSLRNHIACVLQNPF--LFYDTVWNNLTCGKD---MEEEAVL 505
Query: 122 RRIRWA------LKLVK-LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
++ A LKL K + EE NLSGG++QRLAIA L+ +L+LDE TS L
Sbjct: 506 EALKRAYADEFILKLPKGVHSVLEESGKNLSGGQQQRLAIARALLKNASILILDEATSAL 565
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
D + + +++ L + + T I++ H LEH DR++ + G+ + EG EE+ +
Sbjct: 566 DAISENYIKNIIGEL--KGQCTQIIIAHKLT-TLEHVDRVLYIENGQKIAEGTKEELLQT 622
Query: 235 V-EFLE 239
EFL+
Sbjct: 623 CPEFLK 628
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 115 bits (284), Expect = 8e-25
Identities = 80/250 (32%), Positives = 133/250 (53%), Gaps = 14/250 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSI 59
M +IE+EN++ YG KA +++L V+KG G +GP+G+GK+T L++ G+I P S
Sbjct: 1 MKVIEIENLTKSYGKFKAVD--NLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSG 58
Query: 60 NGEFEG-NVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
+ G ++F + + +E R+G + +N + +T + F + ++
Sbjct: 59 SVRLLGYDIFKEPIKAKE--------RLGFLPENA-TIYEELTAWRNLDFFASFYNIPKQ 109
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E +RI LKLV LWD R + S G KQRL +A L+ P++L+LDEPTS LDP G
Sbjct: 110 EKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQG 169
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
V ++ L K++ T+ H + E AD++ + G++ G EE+ + L
Sbjct: 170 ARLVKDII-LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMEL 228
Query: 239 ERIGIRIPTR 248
E I++ T+
Sbjct: 229 EGYEIKVETK 238
>gb|AAF73656.1| (AE002196) ABC transporter, ATP-binding protein [Chlamydophila
pneumoniae AR39] >gi|8978785|dbj|BAA98621.1| (AP002546)
Transport ATP Binding Protein [Chlamydophila pneumoniae
J138]
Length = 659
Score = 115 bits (284), Expect = 8e-25
Identities = 85/246 (34%), Positives = 129/246 (51%), Gaps = 22/246 (8%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N I ENVSF Y K + L++++ + KGE LGI+GP+GSGK+T L L S
Sbjct: 397 NTITFENVSFGYQEDK-HILKNLSFTLHKGEALGIVGPTGSGKTTLVKLLPRLYEVS--- 452
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
+G + +D L E++ L + V QNP LF TV + + +E E +
Sbjct: 453 --QGKILIDSLPITEYNKGSLRNHIACVLQNPF--LFYDTVWNNLTCGKD---MEEEAVL 505
Query: 122 RRIRWA------LKLVK-LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
++ A LKL K + EE NLSGG++QRLAIA L+ +L+LDE TS L
Sbjct: 506 EALKRAYADEFILKLPKGVHSVLEESGKNLSGGQQQRLAIARALLKNASILILDEATSAL 565
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
D + + +++ L + + T I++ H LEH DR++ + G+ + EG EE+ +
Sbjct: 566 DAISENYIKNIIGEL--KGQCTQIIIAHKLT-TLEHVDRVLYIENGQKIAEGTKEELLQT 622
Query: 235 V-EFLE 239
EFL+
Sbjct: 623 CPEFLK 628
>pir||E83248 probable ATP-binding component of ABC transporter PA3187 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949305|gb|AAG06575.1|AE004742_11 (AE004742)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 386
Score = 115 bits (284), Expect = 8e-25
Identities = 73/234 (31%), Positives = 125/234 (53%), Gaps = 8/234 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +E+ N+ YG+ A +LRD+ L + GEFL ++GPSG GKST + GL SI
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGL--ESIT 58
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G G + VDG + S + + +VFQ+ + M+V E +AF L+ + + +
Sbjct: 59 G---GAILVDGQDISGMSPKDRD--IAMVFQSY-ALYPTMSVRENIAFGLKIRKMPQAAI 112
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+ +L+++ E P LSGG++QR+A+ L +PKV + DEP S LD R
Sbjct: 113 DEEVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEPLSNLDAKLRV 172
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
E+ + ++L+++ K T + V H+ + D++ V G + G P++++ +
Sbjct: 173 EMRTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYND 226
>pir||A71351 probable cobalt ABC transporter, ATP-binding protein - syphilis
spirochete >gi|3322495|gb|AAC65214.1| (AE001204) cobalt
ABC transporter, ATP-binding protein [Treponema
pallidum]
Length = 255
Score = 114 bits (283), Expect = 1e-24
Identities = 78/244 (31%), Positives = 122/244 (49%), Gaps = 19/244 (7%)
Query: 3 IIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE 62
++E+ NVS + L V+ V G+ + + G +GSGK+ L GL P S
Sbjct: 18 LLELVNVSKSFERD-CEVLHSVSFRVFPGDCVVLAGANGSGKTVLMNILAGLEPPS---- 72
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWR 122
G V++ T VGL FQN D+Q+ TV E+ AF G R E+
Sbjct: 73 -SGRVYM-----------ARGTTVGLAFQNADTQILGETVFEDCAFGPLQWGYSRAEIDA 120
Query: 123 RIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEV 182
R AL V L D+R+ + LSGGEK+RL +A VL + KV++LDEP + LD +V
Sbjct: 121 RTNSALAAVSLLDRRDHYARALSGGEKRRLTVAGVLALDAKVVILDEPFANLDYPSVRQV 180
Query: 183 LSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIG 242
+ L+ L K T++++ H + +L A R+ + G + +G P++ ++ + G
Sbjct: 181 VQLIISLKHAGK-TLVIITHEVEKILAAATRLCILSKGVISYDGTPQDALDS-KIFSCYG 238
Query: 243 IRIP 246
+R P
Sbjct: 239 LRDP 242
>sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1469284|gb|AAB05030.1| (U05042) afuC gene product
[Actinobacillus pleuropneumoniae]
>gi|1477453|gb|AAB17216.1| (U04954) afuC [Actinobacillus
pleuropneumoniae]
Length = 348
Score = 114 bits (282), Expect = 1e-24
Identities = 71/227 (31%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+ + ++N++ +G KA + +++L +K+G + ++GPSG GK+T + GL
Sbjct: 4 DFLVLKNITKSFG--KATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGL-----EN 56
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
G +F+DG + + S+ + +VFQ+ LF +M++ + V + L GV EE
Sbjct: 57 PTSGQIFIDGEDVTKSSIQNRD--ICIVFQS--YALFPHMSIGDNVGYGLRMQGVSNEER 112
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+R++ AL+LV L + F +SGG++QR+A+A LV+KPKVL+LDEP S LD R
Sbjct: 113 KQRVKEALELVDLAGFADRFVDQISGGQQQRVALARALVLKPKVLILDEPLSNLDANLRR 172
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGK 227
+ +R L + IT + V H+ +D ++V + G ++ + +
Sbjct: 173 SMREKIRELQQRLGITSLYVTHDQTEAFAVSDEVIVMNKGTIMQKAR 219
>pir||E70584 phosphate transport ATP-binding protein pstB - Mycobacterium
tuberculosis (strain H37RV) >gi|2078050|emb|CAB08485.1|
(Z95209) pstB [Mycobacterium tuberculosis]
Length = 276
Score = 114 bits (282), Expect = 1e-24
Identities = 74/225 (32%), Positives = 121/225 (52%), Gaps = 10/225 (4%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREH-SV 79
L V++ ++GP+GSGK+TF TLN + + G+V + G + + V
Sbjct: 37 LDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96
Query: 80 AELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWA-LKLVKLWD--- 135
E RVG++FQ P+ F M++++ V + + + +R + A L V LWD
Sbjct: 97 LEFRRRVGMLFQRPNP--FPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK 154
Query: 136 -KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEK 194
+ + P LSGG++Q L +A L + P+VL+LDEPTS LDP E++ +R L ++
Sbjct: 155 DRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSL--ADR 212
Query: 195 ITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLE 239
+T+I+V HN +DR +F GR+V EG E++F + + E
Sbjct: 213 LTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKHAE 257
>pir||T35450 ABC transporter ATP binding protein - Streptomyces coelicolor
>gi|3319738|emb|CAA19904.1| (AL031035) ABC transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 348
Score = 114 bits (282), Expect = 1e-24
Identities = 82/233 (35%), Positives = 118/233 (50%), Gaps = 12/233 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+++ +E + ++G L DV L V + E + ++GPSGSGKST + GL P
Sbjct: 4 SLLSLEGATVRFGGRAV--LDDVGLGVAEHEVVCVLGPSGSGKSTLLRAVAGLQPLDA-- 59
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEM 120
G V +DG + + V VGL+FQ D QLF V +AF G R E
Sbjct: 60 ---GRVTLDGRD--QSGVPAHKREVGLMFQ--DHQLFPQRDVAGNIAFGPRMRGASRAEQ 112
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
R+ L+LV L LSGGE+QR+A+A L +P++L+LDEP QLD RE
Sbjct: 113 QARVAELLQLVGLPGAARRSVAALSGGEQQRVALARALAPRPRLLMLDEPLGQLDRSLRE 172
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
++ +R L T++ V H+ ADR+VV GR+ G P EV++
Sbjct: 173 RLVVELRELFGRLGTTVLAVTHDQGEAFALADRVVVMRDGRIAQSGTPLEVWQ 225
>pir||F72604 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE1301 - Aeropyrum pernix (strain
K1) >gi|5104978|dbj|BAA80292.1| (AP000061) 248aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 248
Score = 114 bits (282), Expect = 1e-24
Identities = 76/247 (30%), Positives = 136/247 (54%), Gaps = 14/247 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
+++++L+V+KG +IGP+G+GK+T ++G+I + G++ ++G +
Sbjct: 9 IKNLSLSVEKGSITCLIGPNGAGKTTLLKAVSGVIKYERGRVTRGSIQLEGEDITNREPD 68
Query: 81 ELSTRVGLVFQNPDSQLFNMTVLEE----VAFALENLGVEREEMWRRIRWALKLVKLWDK 136
E++ R G+++ ++F EE VA+A G R+++ + + +L ++
Sbjct: 69 EIARR-GVIYVMEGRRIFKELTTEENLVSVAYAA---GASRDDIRSVLSY---FPRLKER 121
Query: 137 REEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKIT 196
E NLSGGE+Q LAIA L+ +PK+L+LDEP+ L P ++ + +++L++EE +T
Sbjct: 122 LGEKAGNLSGGEQQMLAIAMALLYRPKLLMLDEPSLGLAPKITSQIYATIKMLHREEGLT 181
Query: 197 IILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV---FENVEFLERIGIRIPTRVKIGY 253
I+L E N LE +D V + GR+V+EG EE+ + EF +G R Y
Sbjct: 182 ILLAEQNARKALEISDYGYVIENGRIVLEGSAEELRLDKDVAEFYLGMGKRTSYAQVKWY 241
Query: 254 ELKKRGI 260
KKR +
Sbjct: 242 RRKKRWV 248
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 114 bits (282), Expect = 1e-24
Identities = 73/241 (30%), Positives = 129/241 (53%), Gaps = 18/241 (7%)
Query: 1 MNIIEVENVSFKYG----NSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIP 56
M ++ +E+V+ +G N + D+NL + GEF I+GPSGSGKST + GL
Sbjct: 1 MTVVRLEHVTRDFGKNSPNGPHTGVFDINLTINNGEFFVILGPSGSGKSTMLRIIAGLEK 60
Query: 57 HSINGEFEGNVFVDGLNTREHSVAELSTR---VGLVFQNPDSQLFNMTVLEEVAFALENL 113
G++F+D E+ + + + + +VFQN F MTV + +AF L+
Sbjct: 61 VD-----SGHIFLD-----EYEITDFPPKDRDMAMVFQNYALYPF-MTVYDNIAFPLKIQ 109
Query: 114 GVEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQ 173
+ ++E+ R+R KL+ + P +SGG++QR+A+ ++ +P V ++DEP S
Sbjct: 110 KISKQEIDERVREVAKLLDIEGILNMKPGQISGGQRQRVALGRAIIRRPAVFLMDEPLSN 169
Query: 174 LDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
LD R + ++ L+++ IT I V H+ + ADR+ V + G ++ G P +V++
Sbjct: 170 LDAKLRGTMRVELKKLHEQLGITTIYVTHDQIEAMTLADRVGVINRGNLIQVGGPMDVYD 229
Query: 234 N 234
+
Sbjct: 230 S 230
>gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius]
Length = 245
Score = 114 bits (282), Expect = 1e-24
Identities = 72/229 (31%), Positives = 127/229 (55%), Gaps = 11/229 (4%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M + +++V KY N Y+L +NL V+KGEF+ ++G SGSGK+T LN + I+
Sbjct: 1 MKQLVLKDVCKKYPNQLNYALDHINLIVEKGEFVAVMGRSGSGKTTL---LN--VTSIID 55
Query: 61 GEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLGVE 116
GN++ S E + +G VFQ+ L ++T+ E ++ AL V+
Sbjct: 56 KIDSGNIYCADKEISTFSDKEATNFRKNDIGFVFQDY-MLLDSLTIRENISVALSLKNVD 114
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
++ I K L+++ +++P LSGG++QR++I ++ P+++ DEPT LD
Sbjct: 115 SSKIDDLINSYAKRFNLYEQLKKYPYQLSGGQRQRVSIIRAIIKDPEIIFADEPTGALDL 174
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVME 225
EE + ++ +NK EK+TI++V H+ +ADR+++ G++ ME
Sbjct: 175 KSSEETMMILSEINKTEKVTILMVTHDV-LSASYADRVILLKDGKLHME 222
>pir||A27835 histidine transport protein hisP - Escherichia coli
>gi|41705|emb|CAA68511.1| (Y00455) P protein (AA 1-257)
[Escherichia coli]
Length = 257
Score = 113 bits (281), Expect = 2e-24
Identities = 85/252 (33%), Positives = 138/252 (54%), Gaps = 32/252 (12%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
N + V ++ +YG + L+ V+L G+ + IIG SGSGKSTF +N L S
Sbjct: 4 NKLNVIDLHKRYGEHEV--LKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS--- 58
Query: 62 EFEGNVFVDGLNTR-------------EHSVAELSTRVGLVFQNPDSQLFN----MTVLE 104
EG++ V+G ++ + L TR+ +VFQ+ FN MTVLE
Sbjct: 59 --EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQH-----FNLWSHMTVLE 111
Query: 105 EVAFA-LENLGVEREEMWRRIRWALKLVKLWDKRE-EFPPNLSGGEKQRLAIASVLVMKP 162
V A ++ LG+ ++E R L V + ++ + ++P +LSGG++QR++IA L M+P
Sbjct: 112 NVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEP 171
Query: 163 KVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV 222
+VL+ DEPTS LDP E+L +++ L +E K T+++V H F + ++ G++
Sbjct: 172 EVLLFDEPTSALDPELVGELLRIMQQLAEEGK-TMVVVTHEMGFARHVSTHVIFLHQGKI 230
Query: 223 VMEGKPEEVFEN 234
EG PE++F N
Sbjct: 231 EEEGAPEQLFGN 242
>pir||S54863 ABC transporter PstB chain - Mycobacterium tuberculosis
>gi|2127483|pir||JC5101 phosphate specific transporter B
- Mycobacterium tuberculosis >gi|840829|emb|CAA88024.1|
(Z47981) PstB subunit of ABC transporter [Mycobacterium
tuberculosis]
Length = 276
Score = 113 bits (281), Expect = 2e-24
Identities = 76/225 (33%), Positives = 119/225 (52%), Gaps = 10/225 (4%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREH-SV 79
L V++ ++GP+GSGK+TF TLN + + G+V + G + + V
Sbjct: 37 LDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96
Query: 80 AELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWA-LKLVKLWD--- 135
E RVG++FQ P+ F M++++ V A R R + A L V LWD
Sbjct: 97 LEFRRRVGMLFQRPNP--FPMSIMDNVLAACVPTNWCRARNSRGVAQARLTEVGLWDAVK 154
Query: 136 -KREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEK 194
+ + P LSGG++Q L +A L + P+VL+LDEPTS LDP E++ +R L ++
Sbjct: 155 DRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSL--ADR 212
Query: 195 ITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLE 239
+T+I+V HN +DR +F GR+V EG E++F + + E
Sbjct: 213 LTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKHAE 257
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 113 bits (281), Expect = 2e-24
Identities = 71/236 (30%), Positives = 129/236 (54%), Gaps = 12/236 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKST-FCLTLNGLIPHSI 59
M+++ EN+ ++G + Y + VNL +GE +G++GP+G+GK+T F + L ++P S
Sbjct: 1 MDVLRCENLKKRFG--RRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTS- 57
Query: 60 NGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFN-MTVLEEVAFALENLGVERE 118
G + ++ + V + R+G+ + ++ +F +TV E + L ++E
Sbjct: 58 -----GKIIFRDVDITKFPVYRRA-RLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKE 111
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
+ R+I L L + LSGGEK++L +A ++ + P ++LDEP S +DP
Sbjct: 112 KRERKIEELLHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKT 171
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+E+ + L K++ I++ +HN D L+E ADRI V G ++ EG PE + E+
Sbjct: 172 VKEIQKMTLEL-KQKNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILED 226
>pir||C81352 lipid export ABC transport protein Cj0803 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968249|emb|CAB73068.1| (AL139076) lipid export ABC
transport protein [Campylobacter jejuni]
Length = 580
Score = 113 bits (281), Expect = 2e-24
Identities = 77/249 (30%), Positives = 126/249 (49%), Gaps = 15/249 (6%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I ENV F Y N L+ VN + KG+ L ++G SG GKS+ L
Sbjct: 339 ISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEKQ----- 393
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
+G + ++ + ++ L ++GLV QN LFN + +A++ E L E+ +
Sbjct: 394 KGKILLNQEDISTFTIESLHAKIGLVTQN--IYLFNDSFAANIAYS-EELEEEKVIQALK 450
Query: 124 IRWALKLVK----LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
+ A + VK +W + +E NLSGG+KQR+AIA L P VL+ DE TS LD
Sbjct: 451 LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNESE 510
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLE 239
+ ++ + L ++ I ++ +T +E+AD+IVV D G+V+ GK EE+ + +
Sbjct: 511 KAIVKTIENLKQDRLILVVAHRLST---IENADKIVVLDKGKVLAIGKDEELLQTCSLYQ 567
Query: 240 RIGIRIPTR 248
+ + T+
Sbjct: 568 KFKSKEKTK 576
>gb|AAD33527.2|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]
>gi|9755013|gb|AAF98153.1|AF251216_1 (AF251216) FhuC
[Staphylococcus aureus]
Length = 265
Score = 113 bits (281), Expect = 2e-24
Identities = 75/245 (30%), Positives = 128/245 (51%), Gaps = 13/245 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
MN + + V YG++ + DV + G+ IIGP+G GKST L+ L+
Sbjct: 1 MNRLHGQQVKIGYGDNTIINKLDVE--IPDGKVTSIIGPNGCGKSTLLKALSRLLAVK-- 56
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFAL----ENLGVE 116
EG VF+DG N S E++ ++ ++ Q+P+ +TV E V++ + G
Sbjct: 57 ---EGEVFLDGENIHTQSTKEIAKKIAILPQSPEVA-DGLTVGELVSYGRFPHQKGFGRL 112
Query: 117 REEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
E + I WA+++ R +LSGG++QR+ IA L + ++ LDEPT+ LD
Sbjct: 113 TAEDKKEIDWAMEVTGTDTFRHRSINDLSGGQRQRVWIAMALAQRTDIIFLDEPTTYLDI 172
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
+ E+L LV+ LN+E+ TI++V H+ + + +D ++ G ++ G E+V E
Sbjct: 173 CHQLEILELVQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKEGDIIATGSTEDVLTQ-E 231
Query: 237 FLERI 241
LE++
Sbjct: 232 ILEKV 236
>sp|P45031|YRBF_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1087
>gi|1075226|pir||B64182 hypothetical protein HI1087 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574641|gb|AAC22743.1| (U32788) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 264
Score = 113 bits (280), Expect = 2e-24
Identities = 81/251 (32%), Positives = 137/251 (54%), Gaps = 25/251 (9%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNG-LIPHSIN 60
N+IEV+N++FK G+ Y ++NL VKKG+ I+GPSG GK+T + G L+P
Sbjct: 4 NLIEVKNLTFKRGDRVIYD--NLNLQVKKGKITAIMGPSGIGKTTLLKLIGGQLMPE--- 58
Query: 61 GEFEGNVFVDG-----LNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLG 114
+G + DG L+ RE + E+ R+G++FQ+ LF +++ + VAF +
Sbjct: 59 ---QGEILFDGQDICRLSNRE--LYEVRKRMGMLFQS--GALFTDISTFDNVAFPIREHT 111
Query: 115 VEREEMWRRI-RWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQ 173
E + R+I L+ V L P LSGG +R A+A + + P +++ DEP +
Sbjct: 112 HLPENLIRQIVLMKLEAVGLRGAAALMPSELSGGMARRAALARAIALDPDLIMFDEPFTG 171
Query: 174 LDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
DP+ +LSL++ LN+ +T I+V H+ + +L AD + +V+ EG E++ +
Sbjct: 172 QDPISMGVILSLIKRLNEALNLTSIVVSHDVEEVLSIADYAYIIADQKVIAEGTSEQLLQ 231
Query: 234 N-----VEFLE 239
+ V+FL+
Sbjct: 232 SQDLRVVQFLK 242
>gi|11497837 branched-chain amino acid ABC transporter, ATP-binding protein
(braG-1) [Archaeoglobus fulgidus]
>gi|7445709|pir||E69277 branched-chain amino acid ABC
transporter, ATP-binding protein (braG-1) homolog -
Archaeoglobus fulgidus >gi|2650420|gb|AAB91011.1|
(AE001090) branched-chain amino acid ABC transporter,
ATP-binding protein (braG-1) [Archaeoglobus fulgidus]
Length = 224
Score = 113 bits (280), Expect = 2e-24
Identities = 76/237 (32%), Positives = 132/237 (55%), Gaps = 24/237 (10%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M ++EVE ++ YG KA LRDV++ V +GE + ++GP+G+GK+T ++ GL+
Sbjct: 1 MPLLEVERLNAFYG--KAQVLRDVSIAVDEGEAVAVLGPNGAGKTTLLNSICGLV----- 53
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRV--GLVFQNPDSQLF-NMTVLEEVAFALENLGVER 117
+G + DG R+ S + R+ G+ +LF M+V + + A ++
Sbjct: 54 -RADGRIVFDG---RDISALKPHERIKLGIAISPEGRRLFPEMSVEDNLLIAGDS----- 104
Query: 118 EEMWRRIRWALKLV-KLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
++ + + L +KR++ NLSGGE+Q +AIA L+++P++L+LDEP+ L P
Sbjct: 105 ----NKLDFVYNIFPNLKEKRKQKAKNLSGGEQQMIAIARALMLEPRLLLLDEPSMGLAP 160
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
+ E + + + +E I+I+LVE NT + ADR + G++V EG EE+ E
Sbjct: 161 IVVENIAERIETIKEELGISILLVEQNTQMAFDVADRFYILASGQIVREGTIEEMEE 217
>gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeria monocytogenes]
Length = 397
Score = 113 bits (280), Expect = 2e-24
Identities = 77/223 (34%), Positives = 119/223 (52%), Gaps = 14/223 (6%)
Query: 25 NLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVAEL-- 82
+ +V++GE I+G SGSGKST LN LI + G +++DG + EL
Sbjct: 47 SFSVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT-----SGKIWLDGKELSSLNKKELLE 101
Query: 83 --STRVGLVFQNPDSQLF-NMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREE 139
+ +VFQN LF N T+ V + LE G+++EE + +L LV L ++
Sbjct: 102 VRRKSMSMVFQN--FGLFPNRTINRNVEYGLEIQGMDKEEREKNAAESLALVGLAGYGDQ 159
Query: 140 FPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIIL 199
+P LSGG +QR+ +A L P +L++DE S LDPL R+++ + L + K TII
Sbjct: 160 YPSQLSGGMQQRVGLARALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQDKMKKTIIF 219
Query: 200 VEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV--EFLER 240
+ H+ D L D I++ G VV G PEE+ + E++E+
Sbjct: 220 ITHDLDEALRIGDHIMIMRDGSVVQTGSPEEILAHPANEYVEK 262
>sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|1075749|pir||A53290 oligopeptide transport protein
oppD - Lactococcus lactis subsp. lactis
>gi|308850|gb|AAA16163.1| (L18760) ATP binding protein
[Lactococcus lactis]
Length = 338
Score = 113 bits (279), Expect = 3e-24
Identities = 78/245 (31%), Positives = 137/245 (55%), Gaps = 14/245 (5%)
Query: 2 NIIEVENVS--FKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
NI+E + VS F+ ++ D++L++K+GE L I+G SGSGKSTF + GL H+
Sbjct: 5 NILEAKQVSVAFRIAGKFQKAIYDIDLSLKRGEVLAIVGESGSGKSTFATAVMGL--HNP 62
Query: 60 NG-EFEGNVFVDG---LNTREHSVAEL-STRVGLVFQNPDSQLFN-MTVLEEVAFALENL 113
N + G++ +D + S+A + ++VG++FQNP + L M + +++ L
Sbjct: 63 NQTQITGSILLDDEEVIGKTGDSMASIRGSKVGMIFQNPLTALNPLMKIGQQIKEMLAVH 122
Query: 114 GVEREEMWR-RIRWALKLVKLWDKRE---EFPPNLSGGEKQRLAIASVLVMKPKVLVLDE 169
V E + RI L+ V + + + +FP LSGG +QR+ IA + P +++ DE
Sbjct: 123 DVYPENQYESRIFQLLEQVGIPNPKRVVNQFPHQLSGGMRQRVMIAIAIANDPDLIIADE 182
Query: 170 PTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPE 229
PT+ LD + ++L L+ + K++ +IL+ H+ + E AD + V G++V + E
Sbjct: 183 PTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVEKTSVE 242
Query: 230 EVFEN 234
E+F+N
Sbjct: 243 ELFQN 247
>gb|AAA78896.1| (U13043) membrane associated ATPase [Propionibacterium
freudenreichii]
Length = 297
Score = 113 bits (279), Expect = 3e-24
Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 15/262 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDG--LNTREHS 78
L VNL + +G L ++G +GSGK+T L G + + G V DG ++
Sbjct: 21 LDTVNLAIGRGTRLALLGANGSGKTTLLSCLAGSLKPT-----GGAVERDGAPIDWGRKG 75
Query: 79 VAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKRE 138
+ E V +V Q+PD QLF+ V ++V+F NLG+E +E+ R+R AL L+ E
Sbjct: 76 LREHRRHVQMVLQDPDDQLFSADVSQDVSFGPMNLGLEPDEVHARVREALTLLGADHLAE 135
Query: 139 EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITII 198
LS GE++R+A A + M+P VL+LDEPT+ LDPLG ++ + L + TI+
Sbjct: 136 RATHQLSYGERKRVATAGAVAMRPDVLMLDEPTAGLDPLGVHQMRDALDRLT-DAGTTIV 194
Query: 199 LVEHNTDFLLEHADRI-VVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVKIGYELKK 257
+ H+ L+ AD + +V D V +G PE + + + + R + P + + L
Sbjct: 195 MATHDVALALDWADEVAIVCDA--TVHQGAPEALLSDADLVARSHLDTPWPLALAAAL-- 250
Query: 258 RGITRRAVLSYEEIIAEIAKQL 279
G++ R + +E +A +A L
Sbjct: 251 -GLSARP-RNLDEAVAALAPAL 270
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 113 bits (279), Expect = 3e-24
Identities = 74/230 (32%), Positives = 124/230 (53%), Gaps = 9/230 (3%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+II VEN+ K+G+ +A ++ V+ +VKKGE +GP+G+GK+T L L+ +
Sbjct: 3 DIIVVENLVKKFGDFEA--VKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPT--- 57
Query: 62 EFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMW 121
G +V G + + E+ ++G+VFQ+ +T E + + G E++
Sbjct: 58 --SGKAWVAGHDVLKEP-REVRRKIGIVFQDQSLDR-ELTAYENMYIHGKIYGYGGEKLK 113
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
+RI L+ V+L + +++ SGG +RL IA L+ +P+VL LDEPT LDP R
Sbjct: 114 KRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAH 173
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+ + + KE +TI L H D + ADR+ + D G+++ G P E+
Sbjct: 174 MWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTEL 223
>dbj|BAB03338.1| (AB035453) ABC transporter [Staphylococcus aureus]
Length = 253
Score = 113 bits (279), Expect = 3e-24
Identities = 71/231 (30%), Positives = 125/231 (53%), Gaps = 13/231 (5%)
Query: 1 MNIIEVENVSFKYGNSKAYS--LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M I+EV+ ++ YG K LRD+N+++++GEF+ I+G SGSGK+T L+ S
Sbjct: 1 MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGSSGSGKTTLLNVLS-----S 55
Query: 59 INGEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLG 114
I+ +G++ + G + S ELS +G +FQ + L +TV E + L
Sbjct: 56 IDYISQGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNL-LHTLTVKENIMLPLTVQK 114
Query: 115 VEREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQL 174
+++E M R + + + D +++P LSGG++QR + A + P ++ DEPT L
Sbjct: 115 LDKEHMLNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGAL 174
Query: 175 DPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVME 225
D +++L + +N+ K TII+V H+ +A+R+V+ G++ E
Sbjct: 175 DSKSTQDLLKRLTRMNEAFKSTIIMVTHD-PVAASYANRVVMLKDGQIFTE 224
>sp|P45095|DPPD_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD
>gi|1074009|pir||F64188 dipeptide transport ATP-binding
protein dppD - Haemophilus influenzae (strain Rd KW20)
>gi|972897|gb|AAA95974.1| (U17295) DppD [Haemophilus
influenzae] >gi|1574112|gb|AAC22838.1| (U32798)
dipeptide ABC transporter, ATP-binding protein (dppD)
[Haemophilus influenzae Rd]
Length = 330
Score = 112 bits (278), Expect = 4e-24
Identities = 78/248 (31%), Positives = 133/248 (53%), Gaps = 22/248 (8%)
Query: 1 MNIIEVENVSFKYGNSKA--YSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M +++V+ +S +G+ K ++ ++ V +GE LGI+G SGSGKS L + GLI H
Sbjct: 1 MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHP 60
Query: 59 INGEFEGNVFVDGLNTREHSVAELSTR---------VGLVFQNPDSQLFNM-TVLEEVAF 108
G V + L + L ++ V ++FQ+P + L TV ++
Sbjct: 61 ------GRVSAESLQFENTDLLTLESKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIME 114
Query: 109 ALE-NLGVEREEMWRRIRWALKLVKLWDKREE---FPPNLSGGEKQRLAIASVLVMKPKV 164
AL+ + G ++ R LKLV + D +P LSGG QR+ IA + +PK+
Sbjct: 115 ALKTHEGGTKKARKDRTLELLKLVGIPDPESRIDVYPHQLSGGMSQRVMIAMAIACRPKL 174
Query: 165 LVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVM 224
L+ DEPT+ LD + +++ L+ L K+E +++IL+ H+ + E A+RI+V G++V
Sbjct: 175 LIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAAERIIVMYAGQIVE 234
Query: 225 EGKPEEVF 232
EG +++F
Sbjct: 235 EGTAKDIF 242
>gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T45539 moaD
protein [imported] - Agrobacterium tumefaciens plasmid
pTi15955 >gi|2665715|gb|AAB88475.1| (AF242881) moaD
[Agrobacterium tumefaciens]
Length = 588
Score = 112 bits (278), Expect = 4e-24
Identities = 66/247 (26%), Positives = 132/247 (52%), Gaps = 18/247 (7%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSING 61
+++ V+N++ +G + ++D++ ++ G L ++G SGSGKS L + GL+P +
Sbjct: 5 SVLSVKNLNVAFGKKQV--VQDLSFDIAPGSTLAVVGESGSGKSVTSLAIMGLLPVGV-A 61
Query: 62 EFEGNVFVDGLNTREHSVAEL----STRVGLVFQNPDSQLFNMTVLEEVAFALENL---- 113
+ G++ ++G S +E+ ++ ++FQ P + ++ +++V F +
Sbjct: 62 KASGSIQLNGRELLSLSESEMCGIRGGKISMIFQEP---MTSLNPVQKVGFQIGEAIRIH 118
Query: 114 -GVEREEMWRRIRWALKLVKLWDKR---EEFPPNLSGGEKQRLAIASVLVMKPKVLVLDE 169
G+ +E+ + LK V + D + +P SGG +QR+ IA L P +++ DE
Sbjct: 119 RGLRGKELRNAVLEMLKKVGIPDAERRIDNYPHTFSGGMRQRVMIAMALACNPALIIADE 178
Query: 170 PTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPE 229
PT+ LD + ++L L++ L +E + ++ + H+ + E ADR++V GG+VV G +
Sbjct: 179 PTTALDVTVQAQILELLKQLQRETNVALLFITHDMGVVAEIADRVLVMRGGQVVESGPVD 238
Query: 230 EVFENVE 236
VF E
Sbjct: 239 SVFTRPE 245
Score = 90.9 bits (222), Expect = 2e-17
Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 20/244 (8%)
Query: 3 IIEVENVSFKY-------GN--SKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNG 53
I+EV +++ ++ GN +++ + + KGE LG++G SGSGKST +
Sbjct: 286 ILEVRDLTVRFPLRGGLLGNVQGNVHAVEKASFAIGKGETLGLVGESGSGKSTIGKAIID 345
Query: 54 LIPHSINGEFEGNVFVDGLN---TREHSVAELSTRVGLVFQNPDSQLFN-MTVLEEVAFA 109
L P F G++ VDG E S+A L V ++FQ+P L + T+ +
Sbjct: 346 LAPR-----FGGSIVVDGRTIDYADEKSLAVLRRDVQMIFQDPFGSLDSRQTIGSAIVEP 400
Query: 110 LENLGVER-EEMWRRIRWALKLVKLWDKR-EEFPPNLSGGEKQRLAIASVLVMKPKVLVL 167
+ G+ E+ ++ W L+ V L R P SGG++QR+ IA L M PK+++
Sbjct: 401 MYVHGIASGRELREKMEWLLEKVGLDPARASSLPHEFSGGQRQRICIARALSMSPKLIIA 460
Query: 168 DEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGK 227
DE S LD + +++ L+ L E ++ + + H+ + + R+ V G +V G
Sbjct: 461 DEAVSALDVAIKGQIIELMMDLQSEFGVSYLFISHDMAAVEKICTRVAVMYFGELVEIGG 520
Query: 228 PEEV 231
+ V
Sbjct: 521 RDNV 524
>emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aureus]
>gi|9501787|dbj|BAB03336.1| (AB035452) ABC transporter
[Staphylococcus aureus]
Length = 252
Score = 112 bits (278), Expect = 4e-24
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 17/251 (6%)
Query: 1 MNIIEVENVSFKYGNSKAY-SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
M I+ V++VS YG + +L+D+N +++KGEF+ I+GPSGSGK+T L+ SI
Sbjct: 1 MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLS-----SI 55
Query: 60 NGEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFNMTVLEEVAFALENLGV 115
+ G+V +G + + L+ +G +FQ+ S L +TV E + L +
Sbjct: 56 DQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDY-SILPTLTVKENIMLPLSVQKM 114
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
+ M + + ++D ++P LSGG++QR A A V KP+++ DEPT LD
Sbjct: 115 SKATMEENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHKPQIIFADEPTGALD 174
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRV----VMEGKPEEV 231
++L + +NK TI++V H+ A+R+++ G++ EG+ ++
Sbjct: 175 SKSANDLLQRLEEMNKSFDTTIVMVTHD-PVAASFAERVIMLKDGQIHTQLYQEGRSKQA 233
Query: 232 F-ENVEFLERI 241
F E++ L+ +
Sbjct: 234 FYEDIVHLQSV 244
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 112 bits (277), Expect = 5e-24
Identities = 73/235 (31%), Positives = 125/235 (53%), Gaps = 10/235 (4%)
Query: 1 MNIIEVENVSFKYGNSK--AYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58
M+ +++EN+ +Y K LR +NL ++KGEF+ I+GPSG GK+T + GL+
Sbjct: 2 MSYVKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQD 61
Query: 59 INGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
+ VD L ++ RV +V QN F M+V + +AF L+ + + ++
Sbjct: 62 KGHVYLRGEVVDDLPPKDR-------RVAMVPQNYAIYPF-MSVYDNIAFPLKVMHLSKD 113
Query: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
E+ +R+ +++++ + E P LSGG+ QR+AIA LV ++++DEP S LD
Sbjct: 114 EIKKRVLEVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQV 173
Query: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFE 233
R ++ L ++ K TII V H+ L A ++ + G V G P E+++
Sbjct: 174 RVVAREELKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYK 228
>gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPase [Pseudomonas aeruginosa]
Length = 269
Score = 112 bits (277), Expect = 5e-24
Identities = 73/238 (30%), Positives = 126/238 (52%), Gaps = 8/238 (3%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M +E+ N+ YG+ A +LRD+ L + GEFL ++GPSG GKST + GL SI
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGL--ESIT 58
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
G G + VDG + S + + +VFQ+ + M+V E +AF L+ + + +
Sbjct: 59 G---GAILVDGQDISGMSPKDRD--IAMVFQSY-ALYPTMSVRENIAFGLKIRKMPQAAI 112
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
+ +L+++ E P LSGG++QR+A+ L +PKV + DE S LD R
Sbjct: 113 DEEVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEQLSNLDAKLRV 172
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
E+ + ++L+++ K T + V H+ + D++ V G + G P++++ + + L
Sbjct: 173 EMRTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPDNL 230
>sp|P11599|HLYB_PROVU HEMOLYSIN SECRETION ATP-BINDING PROTEIN >gi|72492|pir||LEEBBV
hemolysin secretion protein hlyB - Proteus vulgaris
>gi|45904|emb|CAA31330.1| (X12852) HlyB haemolysin
secretion protein (AA 1 - 707) [Proteus vulgaris]
Length = 707
Score = 111 bits (276), Expect = 7e-24
Identities = 82/243 (33%), Positives = 131/243 (53%), Gaps = 21/243 (8%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I N+ F+Y L ++NLN+K+GE +GI+G SGSGKS TL LI E
Sbjct: 468 ISFRNIRFRYKPDAPIILNNINLNIKQGEIIGIVGRSGSGKS----TLTKLIQRFYIPE- 522
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G V +DG + L +VG+V Q D+ L N ++++ +A A + VE+ +
Sbjct: 523 NGQVLIDGHDLALADPNWLRRQVGVVLQ--DNVLLNRSIIDNIALADPGMPVEKVIHAAK 580
Query: 124 IRWALKLVKLWDKRE-------EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ A + + RE E LSGG++QR+AIA LV PK+L+ DE TS LD
Sbjct: 581 LAGAHDFIS--ELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALD- 637
Query: 177 LGREEVLSLVRLLNKE-EKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENV 235
E ++R ++K + T+I++ H +++ADRI+V + G+++ +GK +E+ +
Sbjct: 638 --YESEHVIMRNMHKICQGRTVIIIAHRLS-TVKNADRIIVMEKGQIIEQGKHKELLSDP 694
Query: 236 EFL 238
E L
Sbjct: 695 ESL 697
>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
>gi|1075335|pir||G64181 ABC-type transport protein
HI1078 - Haemophilus influenzae
>gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 257
Score = 111 bits (276), Expect = 7e-24
Identities = 79/240 (32%), Positives = 131/240 (53%), Gaps = 16/240 (6%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M++++V N+ + + + L+ ++ + KGE + I+GPSGSGK+TF LN L+
Sbjct: 1 MSMLKVSNIQKNFNGN--HVLKGIDFEINKGEVVAILGPSGSGKTTFLRCLN-LLERPEQ 57
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLG-----V 115
G E F DG + S ++S L + S +F L ALEN+ V
Sbjct: 58 GILE---FTDGSLKIDFS-QKISKADELKLRRRSSMVFQQYNLFPHRSALENVMEGMVVV 113
Query: 116 EREEMWRRIRWALKLVK---LWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTS 172
++++ + AL L++ L +K + FP LSGG++QR+ IA L +KP +++LDEPTS
Sbjct: 114 QKQDKAQAREKALSLLEKVGLKNKADLFPSQLSGGQQQRVGIARALAVKPDIILLDEPTS 173
Query: 173 QLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
LDP EVL +++L +E T+I+V H F + ADR+++ G +V + ++ F
Sbjct: 174 ALDPELVGEVLQTLKML-AQEGWTMIIVTHEMQFAKDVADRVILMADGHIVEQNTADKFF 232
>sp|P47546|Y304_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG304
>gi|1361714|pir||F64233 membrane associated ATPase cbiO
homolog - Mycoplasma genitalium
>gi|3844883|gb|AAC71526.1| (U39710) ABC transporter, ATP
binding protein [Mycoplasma genitalium]
Length = 253
Score = 111 bits (276), Expect = 7e-24
Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
L ++ NV+ G L +IG +GSGKST L G + +G +F N +E +
Sbjct: 2 LNQISFNVQDGCHLAVIGHNGSGKSTLVKLLGGFLKAK-----KGTIF---FNDKELTSV 53
Query: 81 ELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWALKLVKLWDKREEF 140
+ ++G++ Q+PD QL T+ +E+ F LEN GV EM + I L +V+L DK+
Sbjct: 54 GFN-KIGILLQDPDVQLLADTLHQELIFTLENHGVLASEMDKIINEVLTVVELKDKQFTP 112
Query: 141 PPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLV-RLLNKEEKITIIL 199
LS GEKQR A +L +KP++ +LDE S LD ++ V + K+ KI I +
Sbjct: 113 LKKLSFGEKQRAVFACLLAVKPQIYLLDEAFSMLDNKISNKLKKFVFDTIKKQNKIVINI 172
Query: 200 VEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERIGIRIPTRVKIGYELKKRG 259
D L AD I+ G ++ + PE ++E ++ +P + + +++ K+
Sbjct: 173 THDFNDLFL--ADEIIFLSKGSLIKKFAPEAIYEQLDLFHNHHFNLPFPLLLAHKVAKQI 230
Query: 260 ITRRAVLSYE--EIIAEIAKQLR 280
+ LS+E +++ I K L+
Sbjct: 231 NKKTPSLSFELNDVVNWICKHLK 253
>dbj|BAB07691.1| (AP001520) ABC transporter required for expression of cytochrome bd
(ATP-binding protein) [Bacillus halodurans]
Length = 575
Score = 111 bits (276), Expect = 7e-24
Identities = 81/240 (33%), Positives = 130/240 (53%), Gaps = 14/240 (5%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
+ +++V+F + + +L+DV+ VK G IIG SGSGKST + P+S
Sbjct: 334 LSLQHVTFTFDGEQRPALQDVSFYVKPGSKTAIIGASGSGKSTIAHLILKSFPYS----- 388
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
+G++ V+G + + + + Q+ + F T+ E + A EN V EEM R
Sbjct: 389 KGSITVNGTELKHIDEKKWWKTINMSLQS--NHFFVGTLEENLRTANENASV--EEMARA 444
Query: 124 IRWA-LKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVL-VLDEPTSQLDPLGREE 181
++ L ++L D+ +E NLSGGEKQRLAIA +L+ + L +LDEPTS LD L E
Sbjct: 445 LQQVELSHLQLGDRVDEKGANLSGGEKQRLAIARLLLRRHATLWILDEPTSSLDALTEER 504
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERI 241
+L L L N+ + T++ + H LE D+I+V D G+++ G E++ E + R+
Sbjct: 505 MLQL--LFNQAKDATVLFISHRLTG-LEDMDQILVVDQGKIIETGTYEQLMEQNGYFRRM 561
>sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|1075084|pir||C64184 oligopeptide transport
ATP-binding protein oppD - Haemophilus influenzae
(strain Rd KW20) >gi|1574676|gb|AAC22775.1| (U32792)
oligopeptide ABC transporter, ATP-binding protein (oppD)
[Haemophilus influenzae Rd]
Length = 323
Score = 111 bits (275), Expect = 9e-24
Identities = 74/252 (29%), Positives = 135/252 (53%), Gaps = 13/252 (5%)
Query: 3 IIEVEN--VSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
+++V+N V FK + ++ D+N + G LGI+G SGSGKS L GL+ + N
Sbjct: 4 LLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLL--AAN 61
Query: 61 GEFEGNVFVDGLNTREHSVAELST----RVGLVFQNPDSQLFN-MTVLEEVAFALE-NLG 114
GE EG+ +G AEL+ ++ ++FQ+P + L M + E++ L+ + G
Sbjct: 62 GEVEGSAIFEGKELVNLPNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHKG 121
Query: 115 VEREEMWRRIRWALKLVKLWDKREE---FPPNLSGGEKQRLAIASVLVMKPKVLVLDEPT 171
+++ + L VK+ + ++ +P SGG +QR+ IA L+ +PK+L+ DEPT
Sbjct: 122 YDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 181
Query: 172 SQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
+ LD + ++++L+ L +E II++ H+ + D+++V GR + G E++
Sbjct: 182 TALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQI 241
Query: 232 FENVEFLERIGI 243
F + IG+
Sbjct: 242 FYHPTHPYSIGL 253
>gi|11498996 iron (III) ABC transporter, ATP-binding protein (hemV-3)
[Archaeoglobus fulgidus] >gi|7430360|pir||H69424
probable iron(III) ABC transporter hemV-3 -
Archaeoglobus fulgidus >gi|2649168|gb|AAB89842.1|
(AE001007) iron (III) ABC transporter, ATP-binding
protein (hemV-3) [Archaeoglobus fulgidus]
Length = 405
Score = 111 bits (275), Expect = 9e-24
Identities = 78/247 (31%), Positives = 129/247 (51%), Gaps = 16/247 (6%)
Query: 6 VENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEG 65
V+ VS K G+ + L+DV V +GE L ++GP+GSGK+T T+ G++ +G
Sbjct: 5 VKGVSVKLGSREV--LKDVTFEVGEGELLALLGPNGSGKTTMLRTIFGMLK-----PLKG 57
Query: 66 NVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFA----LENLGVEREEMW 121
V +DG RE AE + R L F D+ + N+ V++ V L L +EE +
Sbjct: 58 VVLLDG---REVGSAEEAARK-LGFLPQDTPMTNLKVIDVVMLGRTPYLSGLKRPKEEDY 113
Query: 122 RRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREE 181
R ALK V + + LSGGE+Q++ +A V +P++++LDEPT+ LD + E
Sbjct: 114 RAAMEALKEVGMEKMADRLFSELSGGERQKVMLARVFAQQPEIMLLDEPTAHLDIAAQIE 173
Query: 182 VLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLERI 241
++ +VR ++ K I+ + H+ + A +I++ G VV G+PE+V +
Sbjct: 174 IMEIVRSKVEQGKAAIVAI-HDINLASSFATKILMVKDGVVVYAGRPEDVITEESIRDVF 232
Query: 242 GIRIPTR 248
G + R
Sbjct: 233 GADVVVR 239
>gi|10957146 cytolysin B transport protein [Lactococcus lactis]
>gi|11356453|pir||T43109 cytolysin B transport protein -
Lactococcus lactis plasmid pMRC01
>gi|3582216|gb|AAC56012.1| (AE001272) cytolysin B
transport protein [Lactococcus lactis]
Length = 708
Score = 111 bits (275), Expect = 9e-24
Identities = 73/249 (29%), Positives = 131/249 (52%), Gaps = 29/249 (11%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I +++V F+Y +L+ +++++ G+ + ++G SGSGK+T ++ L S
Sbjct: 474 IVMKDVDFRYTPDSKDALKHISIDINAGQTVALVGISGSGKTTLGKIISTLFKPS----- 528
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
+G +F DG+ + H++ L VG + Q ++ L N T++E NL + +
Sbjct: 529 KGQIFFDGVEIKNHNLDSLRKYVGYIPQ--EAHLHNRTIME-------NLLLGSNYPQQE 579
Query: 124 IRWALKLVKLWDKREEFPP-----------NLSGGEKQRLAIASVLVMKPKVLVLDEPTS 172
+ +K D ++ P NLSGG+KQR+ IA +L+ KPK+LV+DE TS
Sbjct: 580 VLNYCNSLKFLDFIQDLPMGYQTVVSEMGGNLSGGQKQRIHIARILLQKPKLLVMDEATS 639
Query: 173 QLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
LD + + EV L KE T +++ H + +L+ AD+I V + GR++ +G +E+
Sbjct: 640 SLDNISQSEV---YEALEKEINCTKVVIAHRLETILK-ADKIFVLENGRIIEQGNHDELL 695
Query: 233 ENVEFLERI 241
N ++I
Sbjct: 696 NNKGIYKKI 704
>sp|P08716|HLYB_ECOLI HEMOLYSIN SECRETION ATP-BINDING PROTEIN, PLASMID
>gi|95928|pir||S10057 ABC-type transport system
ATP-binding protein hlyB [validated] - Escherichia coli
plasmid pHly152 >gi|150683|gb|AAA98234.1| (M14107)
hemolysin B [Escherichia coli] >gi|225075|prf||1208296C
hemolysin hlyB [Escherichia coli]
Length = 707
Score = 111 bits (274), Expect = 1e-23
Identities = 79/242 (32%), Positives = 127/242 (51%), Gaps = 19/242 (7%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I N+ F+Y L ++NL++K+GE +GI+G SGSGKS TL LI E
Sbjct: 468 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKS----TLTKLIQRFYIPE- 522
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G V +DG + L +VG+V Q D+ L N ++++ ++ A + VE+ +
Sbjct: 523 NGQVLIDGHDLALADPNWLRRQVGVVLQ--DNVLLNRSIIDNISLANPGMSVEKVIYAAK 580
Query: 124 IRWALKLVKLWDKRE-------EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ A + + RE E LSGG++QR+AIA LV PK+L+ DE TS LD
Sbjct: 581 LAGAHDFIS--ELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDY 638
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
++ + + K T+I++ H +++ADRI+V + G++V +GK +E+ E
Sbjct: 639 ESEHVIMRNMHKICKGR--TVIIIAHRLS-TVKNADRIIVMEKGKIVEQGKHKELLSEPE 695
Query: 237 FL 238
L
Sbjct: 696 SL 697
>sp|P10089|HLY2_ECOLI HEMOLYSIN SECRETION ATP-BINDING PROTEIN, CHROMOSOMAL
>gi|146380|gb|AAA23976.1| (M10133) chromosomal hemolysin
B (hlyB) [Escherichia coli]
Length = 707
Score = 111 bits (274), Expect = 1e-23
Identities = 79/242 (32%), Positives = 127/242 (51%), Gaps = 19/242 (7%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEF 63
I N+ F+Y L ++NL++K+GE +GI+G SGSGKS TL LI E
Sbjct: 468 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKS----TLTKLIQRFYIPE- 522
Query: 64 EGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRR 123
G V +DG + L +VG+V Q D+ L N ++++ ++ A + VE+ +
Sbjct: 523 NGQVLIDGHDLALADPNWLRRQVGVVLQ--DNVLLNRSIIDNISLANPGMSVEKVIYAAK 580
Query: 124 IRWALKLVKLWDKRE-------EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
+ A + + RE E LSGG++QR+AIA LV PK+L+ DE TS LD
Sbjct: 581 LAGAHDFIS--ELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDY 638
Query: 177 LGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVE 236
++ + + K T+I++ H +++ADRI+V + G++V +GK +E+ E
Sbjct: 639 ESEHVIMRNMHKICKGR--TVIIIAHRLS-TVKNADRIIVMEKGKIVEQGKHKELLSEPE 695
Query: 237 FL 238
L
Sbjct: 696 SL 697
>pir||D72415 zinc ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980616|gb|AAD35218.1|AE001698_7
(AE001698) zinc ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 240
Score = 111 bits (274), Expect = 1e-23
Identities = 74/216 (34%), Positives = 119/216 (54%), Gaps = 23/216 (10%)
Query: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
M I+EV+N++++ + + L++V +V++GEF+GIIGP+G+GK+T L G I +
Sbjct: 1 MKIVEVKNLTYRINDFEI--LKNVTFSVEEGEFVGIIGPNGAGKTTLVRILVGDIKN--- 55
Query: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQL-FNMTVLEEVAFALENLGVEREE 119
+EG V V G ++G + Q Q F +TV E A + G R+
Sbjct: 56 --YEGKVEVRG-------------KIGYLPQLHQVQREFPITVKEFAAMGM--YGRYRKI 98
Query: 120 MWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGR 179
W ++R LK V + K + NLSGGE QRL++A L+ P +LVLDEP + +D +G+
Sbjct: 99 DWEKVRSTLKDVGILHKENDPIKNLSGGEFQRLSLARALLSDPDILVLDEPEAGVDEMGK 158
Query: 180 EEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIV 215
L+ L KE+ IT+I+V H+ + + I+
Sbjct: 159 ASFYELLNRLRKEKNITVIMVSHDIGMVFKECSTIM 194
>sp|P43245|MDR1_RAT MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEIN 1)
>gi|92489|pir||JH0502 p-glycoprotein - rat
Length = 1277
Score = 110 bits (273), Expect = 2e-23
Identities = 86/241 (35%), Positives = 123/241 (50%), Gaps = 20/241 (8%)
Query: 1 MNIIEVENVSFKY-GNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
M +E +NV F Y S+ L+ +NL VK G+ + ++G SG GKST L L
Sbjct: 388 MGNLEFKNVYFNYPSRSEVKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYD--- 444
Query: 60 NGEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREE 119
EG V +DG + R +V L +G+V Q P LF T+ E + + EN V +E
Sbjct: 445 --PIEGEVSIDGQDIRTINVRYLREIIGVVSQEP--VLFATTIAENIRYGREN--VTMDE 498
Query: 120 MWRRIRWA------LKLVKLWDKRE-EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTS 172
+ + ++ A +KL +D E LSGG+KQR+AIA LV PK+L+LDE TS
Sbjct: 499 IEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATS 558
Query: 173 QLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVF 232
LD E + L E T I++ H + +AD I FDGG +V +G EE+
Sbjct: 559 ALDT--ESEAVVQAALDKAREGRTTIVIAHRLS-TVRNADVIAGFDGGVIVEQGNHEELM 615
Query: 233 E 233
+
Sbjct: 616 K 616
Score = 86.2 bits (210), Expect = 4e-16
Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 18/218 (8%)
Query: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
L+ ++ VKKG+ L ++G SG GKST L G VF+DG ++ +V
Sbjct: 1053 LQGLSFEVKKGQTLRLVGSSGCGKSTVVQLLERFY-----NPMAGTVFLDGKEIKQLNV- 1106
Query: 81 ELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEMWRRIRWAL------KLVKLW 134
+ +G+V Q P LF+ ++ E +A+ + V EE+ R R A L + +
Sbjct: 1107 QCVRALGIVSQEPI--LFDCSIAENIAYGDNSRVVSHEEIVRAAREANIHQFIDSLPEKY 1164
Query: 135 DKRE-EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEE 193
+ R + LSGG+KQR+AIA LV +P +L+LDE TS LD E + L E
Sbjct: 1165 NTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDT--ESEKVVQEALDKARE 1222
Query: 194 KITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
T +++ H +++AD IVV G+V G +++
Sbjct: 1223 GRTCVVIAHRLS-TIQNADLIVVIQNGQVKEHGTHQQL 1259
>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp. (strain PCC
6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
transporter [Synechocystis sp.]
Length = 368
Score = 110 bits (273), Expect = 2e-23
Identities = 74/239 (30%), Positives = 124/239 (50%), Gaps = 14/239 (5%)
Query: 2 NIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGL-IPHSIN 60
+++ V+++ + L+ +N N+ GE LG++GPSG GK+T + G P S
Sbjct: 17 SVLTVQDLGKSFRGQSTPVLQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGFETPTSGT 76
Query: 61 GEFEGNVFV--DGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLG--V 115
EG+ +GL E + G+VFQ D LF ++T+ + +AF L + +
Sbjct: 77 VHLEGDCVSGENGLTPPEQR------QTGMVFQ--DYALFPHLTITDNIAFGLRHKSQKL 128
Query: 116 EREEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLD 175
R+++ R+ L LV L + +P LSGG++QR+A+A L KP +++LDEP S LD
Sbjct: 129 NRQQIQGRVAEVLHLVGLTGLEKRYPHELSGGQQQRIALARALAPKPNLILLDEPLSNLD 188
Query: 176 PLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
R+ + +R + K I V H+ + + +DRI V G + G PEE++ +
Sbjct: 189 VQVRQRLRHEIRHILKATGTAAIFVTHDQEEAMAISDRIGVMYRGNLEQIGTPEEIYRS 247
>pir||F75035 iron (iii) abc transporter, ATP-binding protein (hemv-2) PAB1536 -
Pyrococcus abyssi (strain Orsay)
>gi|5458692|emb|CAB50179.1| (AJ248287) iron (III) ABC
transporter, ATP-binding protein (hemV-2) [Pyrococcus
abyssi]
Length = 238
Score = 110 bits (273), Expect = 2e-23
Identities = 91/249 (36%), Positives = 129/249 (51%), Gaps = 31/249 (12%)
Query: 8 NVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNV 67
NVSF YG+ + L++ + +KGE + IIGP+GSGKST + G++ ++
Sbjct: 7 NVSFSYGDFEV--LKNAEFSARKGELVSIIGPNGSGKSTLLKCIAGILKPRGRISYDD-- 62
Query: 68 FVDGLNTREHSVAELSTRVGLVFQNPDSQL--FNMTVLEEVAFALENLGVEREEMWRRIR 125
VD +N R A++ + V P S F+ TV E V G + EE
Sbjct: 63 -VDLVNLRPKERAKIVSYV------PQSSFPEFSFTVEEFVELGTYATGGDVEE------ 109
Query: 126 WALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSL 185
AL++V L KR+E LSGGE Q IA L V++LDEPTS LD +E++ L
Sbjct: 110 -ALRMVGLERKRKELITRLSGGEYQLALIARALAQGSDVMLLDEPTSHLDINHTKEIMDL 168
Query: 186 VRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGK----PEEVFENV-----E 236
+ L K+EK+ II V H+ + L ++D IV+ G VV +GK P EV E V
Sbjct: 169 LTRL-KDEKL-IIAVLHDLNLALNYSDYIVIIKKGIVVWKGKTQELPLEVIEEVYGIKPR 226
Query: 237 FLERIGIRI 245
FLE G+R+
Sbjct: 227 FLESNGVRV 235
>gb|AAC45331.1| (U97348) ATP-binding protein homolog [Lactobacillus fermentum]
Length = 249
Score = 110 bits (272), Expect = 2e-23
Identities = 82/241 (34%), Positives = 122/241 (50%), Gaps = 8/241 (3%)
Query: 4 IEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSINGE 62
+++ N++ +GN L++ L G+ ++GPSGSGKST +LN L+ P S +
Sbjct: 1 MKLTNINKSFGNKNV--LKNTTLEFPAGKTTVMVGPSGSGKSTILRSLNLLVMPESGQYD 58
Query: 63 FEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFA-LENLGVEREEM 120
F+ + + G+VFQ D LF N TVL + + L ++E
Sbjct: 59 FDEHHLDFSQKISNKDKLAIRQETGMVFQ--DYNLFPNKTVLGNIIEGPTQVLKQPKKEA 116
Query: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
L V L D + +P LSGG+ QR+AIA L M PK ++LDEPTS LDP
Sbjct: 117 IANAHNLLTKVGLADYGDAYPNELSGGQAQRVAIARALAMSPKYILLDEPTSALDPELEL 176
Query: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFLER 240
VL ++ L EK ++++V HN F AD+I+ + G ++ +G PEE F ER
Sbjct: 177 SVLHVLLQL-AAEKQSMVIVTHNMVFAKHVADKIIFVENGEILYDGTPEEFFAPDNPNER 235
Query: 241 I 241
I
Sbjct: 236 I 236
>dbj|BAA35517.1| (D90720) Hypothetical ABC transporter ATP-binding protein in bcr
5'region. [Escherichia coli] >gi|4062406|dbj|BAA35524.1|
(D90721) Hypothetical ABC transporter ATP-binding
protein in bcr 5'region. [Escherichia coli]
Length = 659
Score = 110 bits (272), Expect = 2e-23
Identities = 79/252 (31%), Positives = 132/252 (52%), Gaps = 26/252 (10%)
Query: 2 NIIEVEN--VSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSI 59
N++ VEN ++F K ++R+++ ++++GE L I+G SGSGKS L L L+ +
Sbjct: 47 NVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA- 105
Query: 60 NGEFEGNVFVDG--LNTREHSVAELSTR------------VGLVFQNPDSQLFNM-TVLE 104
G V D L R V ELS + + ++FQ P + L + TV E
Sbjct: 106 ----GGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGE 161
Query: 105 EVAFALE-NLGVEREEMWRRIRWALKLVKLWDKR---EEFPPNLSGGEKQRLAIASVLVM 160
++A ++ + REE + L V++ + + +P LSGG +QR+ IA L
Sbjct: 162 QIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSC 221
Query: 161 KPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGG 220
+P VL+ DEPT+ LD + ++L L+++L KE + +I + H+ + E ADR++V G
Sbjct: 222 RPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQG 281
Query: 221 RVVMEGKPEEVF 232
V G E++F
Sbjct: 282 EAVETGTVEQIF 293
Score = 83.1 bits (202), Expect = 3e-15
Identities = 65/223 (29%), Positives = 114/223 (50%), Gaps = 9/223 (4%)
Query: 17 KAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGE--FEGNVFVDGLNT 74
+ +++ V+ ++ GE L ++G SGSGKST L L+ S GE F G +D L+
Sbjct: 372 EVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLV-ESQGGEIIFNGQR-IDTLSP 429
Query: 75 REHSVAELSTRVGLVFQNPDSQLF-NMTVLEEVAFALENLGV-EREEMWRRIRWALKLVK 132
+ + L + +FQ+P + L T+ + + L G+ ++ R+ W L+ V
Sbjct: 430 GK--LQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVG 487
Query: 133 LWDKRE-EFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNK 191
L + +P SGG++QR+ IA L + PKV++ DE S LD R ++++L+ L +
Sbjct: 488 LLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQR 547
Query: 192 EEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFEN 234
+ I + + H+ + + R+ V G++V G VFEN
Sbjct: 548 DFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN 590
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.139 0.392
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102593989
Number of Sequences: 2977
Number of extensions: 4439134
Number of successful extensions: 21532
Number of sequences better than 1.0e-10: 2220
Number of HSP's better than 0.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 1702
Number of HSP's that attempted gapping in prelim test: 16562
Number of HSP's gapped (non-prelim): 2806
length of query: 280
length of database: 189,106,746
effective HSP length: 56
effective length of query: 224
effective length of database: 155,591,474
effective search space: 34852490176
effective search space used: 34852490176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)