BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0257 (gap) DE:glyceraldehyde 3-phosphate dehydrogenase (gap)
(334 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9V1P1|G3P_PYRAB GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 665 0.0
sp|O59494|G3P_PYRHO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 628 e-179
sp|P20286|G3P_PYRWO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 622 e-177
gi|11499321 glyceraldehyde 3-phosphate dehydrogenase (gap) [Arch... 377 e-104
sp|P10618|G3P_METFE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 377 e-103
sp|P19314|G3P_METBR GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 367 e-100
sp|P19315|G3P_METFO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 367 e-100
pir||S13773 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (... 365 e-100
sp|O27090|G3P_METTH GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 355 4e-97
emb|CAC12230.1| (AL445066) probable glyceraldehyde-3-phosphate d... 354 8e-97
sp|Q58546|G3P_METJA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 332 4e-90
pir||S51230 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.1... 331 8e-90
pdb|1B7G|O Chain O, Glyceraldehyde 3-Phosphate Dehydrogenase >gi... 331 8e-90
gb|AAK40848.1| Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) ... 330 1e-89
sp|P39460|G3P_SULSO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 330 1e-89
gb|AAF97190.1|AF268611_13 (AF268611) glyceraldehyde-3-phosphate ... 321 9e-87
gb|AAG18725.1| (AE004977) glyceraldehyde 3-phosphate dehydrogena... 315 4e-85
sp|Q9YFS9|G3P_AERPE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GA... 311 8e-84
>sp|Q9V1P1|G3P_PYRAB GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|7431523|pir||E75153 glyceraldehyde 3-phosphate
dehydrogenase (gap) PAB0257 - Pyrococcus abyssi (strain
Orsay) >gi|5457818|emb|CAB49308.1| (AJ248284)
glyceraldehyde 3-phosphate dehydrogenase (gap)
[Pyrococcus abyssi]
Length = 334
Score = 665 bits (1696), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLS 60
MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLS
Sbjct: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLS 60
Query: 61 RFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVS 120
RFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVS
Sbjct: 61 RFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVS 120
Query: 121 FVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADYVYAVMIRRAADPNDIKRGPIN 180
FVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADYVYAVMIRRAADPNDIKRGPIN
Sbjct: 121 FVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADYVYAVMIRRAADPNDIKRGPIN 180
Query: 181 AIKPSVEVPSHHGPDVQTVIPINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFEN 240
AIKPSVEVPSHHGPDVQTVIPINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFEN
Sbjct: 181 AIKPSVEVPSHHGPDVQTVIPINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFEN 240
Query: 241 TTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQES 300
TTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQES
Sbjct: 241 TTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQES 300
Query: 301 DVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
DVVPENVDAIRAMFELADKEESIKKTNKSLGILK
Sbjct: 301 DVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
>sp|O59494|G3P_PYRHO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|7434738|pir||G71194 probable
glyceraldehyde-3-phosphate dehydrogenase - Pyrococcus
horikoshii >gi|3258267|dbj|BAA30950.1| (AP000007) 334aa
long hypothetical glyceraldehyde-3-phosphate
dehydrogenase [Pyrococcus horikoshii]
Length = 334
Score = 628 bits (1602), Expect = e-179
Identities = 305/334 (91%), Positives = 326/334 (97%)
Query: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLS 60
MKVKVGVNGYGTIGKRVAYA+TKQDDMEL+G+ KTKPDFEAYRAKELGIPVYAA+EEF+
Sbjct: 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIP 60
Query: 61 RFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVS 120
RFE GFEV GTLNDLLEKVD+IVDATPGG+GAKNKPLYEKAGVKA+FQGGEKA+VAEVS
Sbjct: 61 RFEKEGFEVAGTLNDLLEKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKADVAEVS 120
Query: 121 FVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADYVYAVMIRRAADPNDIKRGPIN 180
FVAQANYE ALGK+YVRVVSCNTTGLVRTL+AIREYADYVYAVMIRRAADPND KRGPIN
Sbjct: 121 FVAQANYEAALGKNYVRVVSCNTTGLVRTLSAIREYADYVYAVMIRRAADPNDTKRGPIN 180
Query: 181 AIKPSVEVPSHHGPDVQTVIPINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFEN 240
AIKP+VEVPSHHGPDVQTVIPINIETMAFVVPTT+MHVHSVMVELKKPLT++DVIDIFEN
Sbjct: 181 AIKPTVEVPSHHGPDVQTVIPINIETMAFVVPTTLMHVHSVMVELKKPLTKDDVIDIFEN 240
Query: 241 TTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQES 300
TTRVLLFEKEKGF+STAQIIEFARDLHREWNNLYEIAVWKESIN+KGNRL+YIQAVHQES
Sbjct: 241 TTRVLLFEKEKGFDSTAQIIEFARDLHREWNNLYEIAVWKESINIKGNRLFYIQAVHQES 300
Query: 301 DVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
DV+PEN+DAIRAMFELADK +SIKKTNKSLGILK
Sbjct: 301 DVIPENIDAIRAMFELADKWDSIKKTNKSLGILK 334
>sp|P20286|G3P_PYRWO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|66030|pir||DEQYG glyceraldehyde-3-phosphate
dehydrogenase (NAD(P)+) (EC 1.2.1.-) - Pyrococcus woesei
>gi|151735|gb|AAA73180.1| (M83988) glyceraldehyde
3-phosphate dehydrogenase [Pyrococcus woesei]
Length = 334
Score = 622 bits (1587), Expect = e-177
Identities = 302/334 (90%), Positives = 321/334 (95%)
Query: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLS 60
MK+KVG+NGYGTIGKRVAYA+TKQDDMEL+GV KTKPDFEAYRAKELGIPVYAA+EEFL
Sbjct: 1 MKIKVGINGYGTIGKRVAYAVTKQDDMELIGVTKTKPDFEAYRAKELGIPVYAASEEFLP 60
Query: 61 RFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVS 120
RFE GFEVEGTLNDLLEKVD+IVDATPGG+G KNK LYEKAGVKA+FQGGEKA VA+VS
Sbjct: 61 RFEKAGFEVEGTLNDLLEKVDIIVDATPGGMGEKNKQLYEKAGVKAIFQGGEKAEVAQVS 120
Query: 121 FVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADYVYAVMIRRAADPNDIKRGPIN 180
FVAQANYE ALGK YVRVVSCNTTGLVRTLNAI++Y DYVYAVMIRRAADPNDIKRGPIN
Sbjct: 121 FVAQANYEAALGKDYVRVVSCNTTGLVRTLNAIKDYVDYVYAVMIRRAADPNDIKRGPIN 180
Query: 181 AIKPSVEVPSHHGPDVQTVIPINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFEN 240
AIKPSV +PSHHGPDVQTVIPINIET AFVVPTTIMHVHS+MVELKKPLTREDVIDIFEN
Sbjct: 181 AIKPSVTIPSHHGPDVQTVIPINIETSAFVVPTTIMHVHSIMVELKKPLTREDVIDIFEN 240
Query: 241 TTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQES 300
TTRVLLFEKEKGFESTAQ+IEFARDLHREWNNLYEIAVWKESINVKGNRL+YIQAVHQES
Sbjct: 241 TTRVLLFEKEKGFESTAQLIEFARDLHREWNNLYEIAVWKESINVKGNRLFYIQAVHQES 300
Query: 301 DVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
DV+PEN+DAIRAMFE+A+K ESIKKTNKSLGILK
Sbjct: 301 DVIPENIDAIRAMFEIAEKWESIKKTNKSLGILK 334
>gi|11499321 glyceraldehyde 3-phosphate dehydrogenase (gap) [Archaeoglobus
fulgidus] >gi|3122123|sp|O28542|G3P_ARCFU GLYCERALDEHYDE
3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|7431517|pir||C69466 probable
glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (EC
1.2.1.-) - Archaeoglobus fulgidus
>gi|2648817|gb|AAB89515.1| (AE000983) glyceraldehyde
3-phosphate dehydrogenase (gap) [Archaeoglobus fulgidus]
Length = 340
Score = 377 bits (958), Expect = e-104
Identities = 195/339 (57%), Positives = 251/339 (73%), Gaps = 7/339 (2%)
Query: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLS 60
MKVKV +NGYGTIGKRVA A++ QDDME+VGV KT+PDFEA + P+Y A E +
Sbjct: 2 MKVKVAINGYGTIGKRVADAVSLQDDMEVVGVTKTRPDFEAKLGAKR-YPLYVAKPENVE 60
Query: 61 RFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKP-LYEKAGVKAVFQGGEKANVAEV 119
FE G E++GT+ DLL K D++VD +P VGA+NK YEKAG+KA+FQGGEK +VAEV
Sbjct: 61 LFERAGIEIQGTIEDLLPKADIVVDCSPNKVGAENKAKYYEKAGIKAIFQGGEKKDVAEV 120
Query: 120 SFVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKRG 177
SF A ANY++A+GKSYVRVVSCNTTGL R + ++ + A M+RR DP + K+G
Sbjct: 121 SFNALANYDEAVGKSYVRVVSCNTTGLTRLIYMLKTNFSIGRIRATMLRRVVDPKEDKKG 180
Query: 178 PINAIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVI 235
+N I P V +PSHHGPDV+TV+P ++I T AF +PTT+MHVHS+ VE+++ + EDV+
Sbjct: 181 LVNGIMPDPVAIPSHHGPDVKTVLPDVDIVTTAFKLPTTLMHVHSLCVEMREAVKAEDVV 240
Query: 236 DIFENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQA 295
R++L E GF STA++IEFAR+L ++ LYE VW+ESI V GN L+ QA
Sbjct: 241 SALSEEPRIMLISAEDGFTSTAKVIEFARELRLRYD-LYENIVWRESIGVDGNDLFVTQA 299
Query: 296 VHQESDVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
VHQE+ VVPEN+DAIRAMFELA+KEESI+KTN+SLGI K
Sbjct: 300 VHQEAIVVPENIDAIRAMFELAEKEESIRKTNESLGIGK 338
>sp|P10618|G3P_METFE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|80948|pir||JT0286 glyceraldehyde-3-phosphate
dehydrogenase (EC 1.2.1.12) - Methanothermus fervidus
>gi|7546392|pdb|1CF2|O Chain O, Three-Dimensional
Structure Of D-Glyceraldehyde-3-Phosphate Dehydrogenase
From The Hyperthermophilic Archaeon Methanothermus
Fervidus >gi|7546390|pdb|1CF2|P Chain P,
Three-Dimensional Structure Of
D-Glyceraldehyde-3-Phosphate Dehydrogenase From The
Hyperthermophilic Archaeon Methanothermus Fervidus
>gi|7546393|pdb|1CF2|Q Chain Q, Three-Dimensional
Structure Of D-Glyceraldehyde-3-Phosphate Dehydrogenase
From The Hyperthermophilic Archaeon Methanothermus
Fervidus >gi|7546391|pdb|1CF2|R Chain R,
Three-Dimensional Structure Of
D-Glyceraldehyde-3-Phosphate Dehydrogenase From The
Hyperthermophilic Archaeon Methanothermus Fervidus
>gi|149792|gb|AAA88227.1| (M19980)
glyceraldehyde-3-phosphate dehydrogenase [Methanothermus
fervidus]
Length = 337
Score = 377 bits (957), Expect = e-103
Identities = 183/334 (54%), Positives = 253/334 (74%), Gaps = 4/334 (1%)
Query: 5 VGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRFES 64
V +NGYGT+GKRVA AI +QDDM+++GV KT+PDFEA A + G +Y A E + FE
Sbjct: 4 VAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEK 63
Query: 65 VGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFVAQ 124
G EV GT++D+L++ D+++D TP G+GAKN +Y++ G+KA+FQGGEK +SF +
Sbjct: 64 AGIEVAGTVDDMLDEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEKHEDIGLSFNSL 123
Query: 125 ANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKRGPINAI 182
+NYE++ GK Y RVVSCNTTGL RTL + + V AV++RR ADP + +GPINAI
Sbjct: 124 SNYEESYGKDYTRVVSCNTTGLCRTLKPLHDSFGIKKVRAVIVRRGADPAQVSKGPINAI 183
Query: 183 KPSV-EVPSHHGPDVQTVIPINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFENT 241
P+ ++PSHHGPDV+TV+ INI+TMA +VPTT+MH H+VMVE+++ T +D+ID+FE+T
Sbjct: 184 IPNPPKLPSHHGPDVKTVLDINIDTMAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDT 243
Query: 242 TRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQESD 301
RV+L E G STA+I+E+A++L R N+L+EI VW+ESI V N +YY+QAVHQESD
Sbjct: 244 PRVILISAEDGLTSTAEIMEYAKELGRSRNDLFEIPVWRESITVVDNEIYYMQAVHQESD 303
Query: 302 VVPENVDAIRAMFEL-ADKEESIKKTNKSLGILK 334
+VPENVDA+RA+ E+ DK +SI KTNK++ IL+
Sbjct: 304 IVPENVDAVRAILEMEEDKYKSINKTNKAMNILQ 337
>sp|P19314|G3P_METBR GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|7427721|pir||S02804 glyceraldehyde-3-phosphate
dehydrogenase (NAD(P)+) (EC 1.2.1.-) - Methanobacterium
bryantii >gi|44175|emb|CAA32780.1| (X14631) GAPDH (AA 1
- 338) [Methanobacterium bryantii]
Length = 338
Score = 367 bits (932), Expect = e-100
Identities = 190/335 (56%), Positives = 245/335 (72%), Gaps = 6/335 (1%)
Query: 5 VGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRFES 64
VG+NGYGTIGKRVA A++ QDDM++VGV K PDFEA A E G +Y + E S FE
Sbjct: 4 VGINGYGTIGKRVADAVSAQDDMKIVGVTKRSPDFEARMAVENGYDLYISVPERESSFEE 63
Query: 65 VGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKP-LYEKAGVKAVFQGGEKANVAEVSFVA 123
G +V GT ++LLEK+D++VD TP G+GAKNK YEK G+KA+FQGGEK + +SF +
Sbjct: 64 AGIKVTGTADELLEKLDIVVDCTPEGIGAKNKEGTYEKMGLKAIFQGGEKHDQIGLSFNS 123
Query: 124 QANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKRGPINA 181
+NY +GK Y RVVSCNTTGL RTLN I + V AVM+RR ADP +K+GPINA
Sbjct: 124 FSNYNDVIGKDYARVVSCNTTGLCRTLNPINDLCGIKKVRAVMVRRGADPGQVKKGPINA 183
Query: 182 IKPSVE-VPSHHGPDVQTVI-PINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFE 239
I P+ VPSHHGPDVQTV+ +NI TMA +VPTT+MH H++MVEL+ ++ +D+ +
Sbjct: 184 IVPNPPTVPSHHGPDVQTVMYDLNITTMALLVPTTLMHQHNLMVELESSVSVDDIKEKLN 243
Query: 240 NTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQE 299
T RVLL + +G STA +E+A+DL R N+L+EI VW+ES+N+ LYY+QA+HQE
Sbjct: 244 ETPRVLLLKAGEGLTSTAGFMEYAKDLGRSRNDLFEIGVWEESLNIVDGELYYMQAIHQE 303
Query: 300 SDVVPENVDAIRAMFELA-DKEESIKKTNKSLGIL 333
SDVVPENVDAIRAM E+ D +SI+KTNK++GIL
Sbjct: 304 SDVVPENVDAIRAMLEMENDPSKSIQKTNKAMGIL 338
>sp|P19315|G3P_METFO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|80909|pir||S02803 glyceraldehyde-3-phosphate
dehydrogenase NAD(P) (EC 1.2.1.-) - Methanobacterium
formicicum >gi|4456664|emb|CAB37402.1| (X14632)
glyceraldehyde 3-phosphate dehydrogenase
(phosphorylating) [Methanobacterium formicicum]
Length = 338
Score = 367 bits (932), Expect = e-100
Identities = 188/335 (56%), Positives = 246/335 (73%), Gaps = 6/335 (1%)
Query: 5 VGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRFES 64
VG+NGYGTIGKRVA A++ QDDM++VGV K PDFEA A E G +Y + E + FE
Sbjct: 4 VGINGYGTIGKRVADAVSAQDDMKIVGVTKRSPDFEARMAVEKGYDLYISAPERENSFEE 63
Query: 65 VGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKP-LYEKAGVKAVFQGGEKANVAEVSFVA 123
G +V GT +L EK+D++VD TP G+GAKNK YEK G+KA FQGGEK + +SF +
Sbjct: 64 AGIKVTGTAEELFEKLDIVVDCTPEGIGAKNKEGTYEKMGLKATFQGGEKHDQIGLSFNS 123
Query: 124 QANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKRGPINA 181
+NY+ +GK Y RVVSCNTTGL RTLN I + V AVM+RR ADP+ +K+GPINA
Sbjct: 124 FSNYKDVIGKDYARVVSCNTTGLCRTLNPINDLCGIKKVRAVMVRRGADPSQVKKGPINA 183
Query: 182 IKPSVE-VPSHHGPDVQTVI-PINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFE 239
I P+ VPSHHGPDVQTV+ +NI TMA +VPTT+MH H++MVEL+ ++ +D+ D
Sbjct: 184 IVPNPPTVPSHHGPDVQTVMYDLNITTMALLVPTTLMHQHNLMVELESSVSIDDIKDKLN 243
Query: 240 NTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQE 299
T RVLL + ++G STA+ +E+A++L R N+L+EI VW+ES+N+ LYY+QA+HQE
Sbjct: 244 ETPRVLLLKAKEGLGSTAEFMEYAKELGRSRNDLFEIGVWEESLNIVDGELYYMQAIHQE 303
Query: 300 SDVVPENVDAIRAMFELADK-EESIKKTNKSLGIL 333
SDVVPENVDAIRAM E+ D +SI+KTNK++GIL
Sbjct: 304 SDVVPENVDAIRAMLEMEDNPSKSIEKTNKAMGIL 338
>pir||S13773 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (EC 1.2.1.-) -
Methanobacterium formicicum
Length = 338
Score = 365 bits (926), Expect = e-100
Identities = 187/335 (55%), Positives = 245/335 (72%), Gaps = 6/335 (1%)
Query: 5 VGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRFES 64
VG+NGYGTIGKRVA A++ QDDM++VGV K PDFEA A G +Y + E + FE
Sbjct: 4 VGINGYGTIGKRVADAVSAQDDMKIVGVTKRSPDFEARMAVXKGYDLYISAPERENSFEE 63
Query: 65 VGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKP-LYEKAGVKAVFQGGEKANVAEVSFVA 123
G +V GT +L EK+D++VD TP G+GAKNK YEK G+KA FQGGEK + +SF +
Sbjct: 64 AGIKVTGTAEELFEKLDIVVDCTPEGIGAKNKEGTYEKMGLKATFQGGEKHDQIGLSFNS 123
Query: 124 QANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKRGPINA 181
+NY+ +GK Y RVVSCNTTGL RTLN I + V AVM+RR ADP+ +K+GPINA
Sbjct: 124 FSNYKDVIGKDYARVVSCNTTGLCRTLNPINDLCGIKKVRAVMVRRGADPSQVKKGPINA 183
Query: 182 IKPSVE-VPSHHGPDVQTVI-PINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFE 239
I P+ VPSHHGPDVQTV+ +NI TMA +VPTT+MH H++MVEL+ ++ +D+ D
Sbjct: 184 IVPNPPTVPSHHGPDVQTVMYDLNITTMALLVPTTLMHQHNLMVELESSVSIDDIKDKLN 243
Query: 240 NTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQE 299
T RVLL + ++G STA+ +E+A++L R N+L+EI VW+ES+N+ LYY+QA+HQE
Sbjct: 244 ETPRVLLLKAKEGLGSTAEFMEYAKELGRSRNDLFEIGVWEESLNIVDGELYYMQAIHQE 303
Query: 300 SDVVPENVDAIRAMFELADK-EESIKKTNKSLGIL 333
SDVVPENVDAIRAM E+ D +SI+KTNK++GIL
Sbjct: 304 SDVVPENVDAIRAMLEMEDNPSKSIEKTNKAMGIL 338
>sp|O27090|G3P_METTH GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|7431516|pir||E69001 probable
glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (EC
1.2.1.-) - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2622111|gb|AAB85505.1| (AE000874)
glyceraldehyde 3-phosphate dehydrogenase
[Methanobacterium thermoautotrophicum]
Length = 337
Score = 355 bits (901), Expect = 4e-97
Identities = 181/336 (53%), Positives = 242/336 (71%), Gaps = 5/336 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
+ V +NGYGTIGKRVA A+ QDDM++ GV KTKPDFEA A E G +Y + E F
Sbjct: 2 ISVAINGYGTIGKRVADAVAAQDDMKVAGVSKTKPDFEARVAIEKGYDLYVSIPEREKLF 61
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
G V GT+ D+LE+ D++VDATP G+GAKN +Y + G+KA+FQGGEK + +SF
Sbjct: 62 GEAGIPVSGTVEDMLEEADIVVDATPEGIGAKNLEMYREKGIKAIFQGGEKHDAIGLSFN 121
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKRGPIN 180
+ ANY+++LG Y RVVSCNTTGL RTL I + V AVM+RR ADP +K+GPIN
Sbjct: 122 SFANYDESLGADYTRVVSCNTTGLCRTLKPIDDLCGIKKVRAVMVRRGADPVQVKKGPIN 181
Query: 181 AIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIF 238
AI P+ VPSHHGPD++TV+ +NI T+A +VPTT+MH H++MVEL+ P+ +++
Sbjct: 182 AIVPNPPTVPSHHGPDLKTVMKGVNIHTVALLVPTTLMHQHNIMVELEDPVEADEIKARL 241
Query: 239 ENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQ 298
+ TTRV+L +G STA+I+E+A++L R N+L+EI VW+ESINV L+Y+QAVHQ
Sbjct: 242 DETTRVMLVRASEGLASTAEIMEYAKELGRSRNDLFEIPVWEESINVVDGELFYMQAVHQ 301
Query: 299 ESDVVPENVDAIRAMFEL-ADKEESIKKTNKSLGIL 333
ESD VPE+VDAIRA+ EL D +SI KTN+++GIL
Sbjct: 302 ESDAVPESVDAIRALLELEEDNMKSIMKTNRAMGIL 337
>emb|CAC12230.1| (AL445066) probable glyceraldehyde-3-phosphate dehydrogenase
[Thermoplasma acidophilum]
Length = 338
Score = 354 bits (899), Expect = 8e-97
Identities = 169/335 (50%), Positives = 245/335 (72%), Gaps = 4/335 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
++VG+NGYGTIG+RVA A++ QDDM + G+VKTKPD+ + A ++ ++ + F
Sbjct: 2 IRVGINGYGTIGRRVARAVSLQDDMIVTGIVKTKPDYVSMVASR-DFKIFVPDKSYEKAF 60
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
+ G +VEGT+ +L++ ++IVDATP G G KNK LY K +KA+F+GGE+ +A+ SF
Sbjct: 61 QDAGIKVEGTVENLIDDSEIIVDATPEGQGEKNKDLYVKRRIKAIFEGGEEPEIAQASFN 120
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYAD--YVYAVMIRRAADPNDIKRGPIN 180
A +N+E+A K YVRVVSCNTT L RTL+ +RE YV A ++RRA DPND K+GPIN
Sbjct: 121 AYSNFEEARSKDYVRVVSCNTTALARTLHPLRERFGIRYVDATIVRRATDPNDSKKGPIN 180
Query: 181 AIKPSVEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIFE 239
A++PS+ +PSHH PD++TV+ +N+ T+A PTT+MHVH+V VEL+K ++ DVI+ +
Sbjct: 181 AVEPSLSIPSHHAPDLRTVMSGLNVSTIAIKAPTTLMHVHAVRVELEKDASKNDVIEAWR 240
Query: 240 NTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQE 299
+ R++ K G ST Q+++ AR+ R+ ++LYEIAVW +S++V+GN + YIQAVHQE
Sbjct: 241 SYRRIMEIGKNSGITSTGQMMDLAREFGRDRSDLYEIAVWSQSVSVQGNHVSYIQAVHQE 300
Query: 300 SDVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
SDVVPENVDAIR+MF++AD++ S+ T+ L I K
Sbjct: 301 SDVVPENVDAIRSMFDIADRDRSVSMTDSKLKIEK 335
>sp|Q58546|G3P_METJA GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|2117521|pir||A64443 glyceraldehyde-3-phosphate
dehydrogenase (EC 1.2.1.12) - Methanococcus jannaschii
>gi|1591778|gb|AAB99147.1| (U67557) glyceraldehyde
3-phosphate dehydrogenase [Methanococcus jannaschii]
Length = 343
Score = 332 bits (842), Expect = 4e-90
Identities = 176/342 (51%), Positives = 238/342 (69%), Gaps = 10/342 (2%)
Query: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAA--NEEF 58
M KV +NGYG+IGKRVA A++ QDDME++GV KTKPDFEA A E G ++ A + E
Sbjct: 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNER 60
Query: 59 LSRFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKN-KPLYEKAGVKAVFQGGEKANVA 117
+ FE G VEGT+ D++E D++VD P +G +N + +Y+ VKA+ QGGEKA
Sbjct: 61 VKLFEDAGIPVEGTILDIIEDADIVVDGAPKKIGKQNLENIYKPHKVKAILQGGEKAKDV 120
Query: 118 EVSFVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADYVYA--VMIRRAADPNDIK 175
E +F A +Y + GK YVRVVSCNTTGL R L AI AD A V++RRAADPND K
Sbjct: 121 EDNFNALWSYNRCYGKDYVRVVSCNTTGLCRILYAINSIADIKKARIVLVRRAADPNDDK 180
Query: 176 RGPINAIKPS-VEVPSHHGPDVQTVIPI---NIETMAFVVPTTIMHVHSVMVELKKPLTR 231
GP+NAI P+ V VPSHHGPDV +V+P I T A +VPTT+MH+H++MVE+ ++R
Sbjct: 181 TGPVNAITPNPVTVPSHHGPDVVSVVPEFEGKILTSAVIVPTTLMHMHTLMVEVDGDVSR 240
Query: 232 EDVIDIFENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLY 291
+D+++ + T R++ E GF STA+IIE+ RDL R ++ E+ VW+ESINV N ++
Sbjct: 241 DDILEAIKKTPRIITVRAEDGFSSTAKIIEYGRDLGRLRYDINELVVWEESINVLENEIF 300
Query: 292 YIQAVHQESDVVPENVDAIRAMFEL-ADKEESIKKTNKSLGI 332
+QAVHQES V+PEN+D IRAM ++ D +SI+KTNK++GI
Sbjct: 301 LMQAVHQESIVIPENIDCIRAMLQMEEDNFKSIEKTNKAMGI 342
>pir||S51230 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - Sulfolobus
solfataricus >gi|809766|emb|CAA47040.1| (X66409)
glyceraldehyde 3-phosphate dehydrogenase [Sulfolobus
solfataricus] >gi|738459|prf||2001200A glyceraldehyde
phosphate dehydrogenase [Sulfolobus solfataricus]
Length = 341
Score = 331 bits (839), Expect = 8e-90
Identities = 164/336 (48%), Positives = 238/336 (70%), Gaps = 4/336 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
+ V VNGYGTIGKRVA AI KQ DM+LVGV KT P++EA+ A G +YA ++ + +F
Sbjct: 2 INVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGYRIYALPQQSIKKF 61
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
E G V GT++ L++ D++VD TP GVGA+ KP+Y + A+FQGGEKA VA++SF
Sbjct: 62 EESGIPVAGTVDYLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFS 121
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYA--DYVYAVMIRRAADPNDIKRGPIN 180
A NY +ALGK Y+RVVSCNTT L+RT+ + + + + V A ++RRAAD ++K+GPIN
Sbjct: 122 ALCNYNEALGKKYIRVVSCNTTALLRTICTVNKVSKVENVRATIVRRAADQKEVKKGPIN 181
Query: 181 AIKPS-VEVPSHHGPDVQTVI-PINIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIF 238
++ P VPSHH DV +VI ++I TMA + PTT+MH+H + + LK + ++D++ +
Sbjct: 182 SLVPDPATVPSHHAKDVNSVIRNLDIATMAVIAPTTLMHMHFINITLKDKVEKKDILSVL 241
Query: 239 ENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQ 298
ENT R++L + E+TA+++E ARDL R+ N++ E+ ++ +SI VK + + + AVHQ
Sbjct: 242 ENTPRIVLISSKYDAEATAELVEVARDLKRDRNDIPEVMIFSDSIYVKDDEVMLMYAVHQ 301
Query: 299 ESDVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
ES VVPEN+DAIRA +L E+S++ TN+SLGILK
Sbjct: 302 ESIVVPENIDAIRASMKLMSAEDSMRITNESLGILK 337
>pdb|1B7G|O Chain O, Glyceraldehyde 3-Phosphate Dehydrogenase
>gi|6435784|pdb|1B7G|Q Chain Q, Glyceraldehyde
3-Phosphate Dehydrogenase
Length = 340
Score = 331 bits (839), Expect = 8e-90
Identities = 166/336 (49%), Positives = 237/336 (70%), Gaps = 5/336 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
V V VNGYGTIGKRVA AI KQ DM+LVGV KT P++EA+ A GI +Y + + +F
Sbjct: 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQS-IKKF 60
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
E G V GT+ DL++ D++VD TP GVGA+ KP+Y + A+FQGGEKA VA++SF
Sbjct: 61 EESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFS 120
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYA--DYVYAVMIRRAADPNDIKRGPIN 180
A NY +ALGK Y+RVVSCNTT L+RT+ + + + + V A ++RRAAD ++K+GPIN
Sbjct: 121 ALCNYNEALGKKYIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAADQKEVKKGPIN 180
Query: 181 AIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIF 238
++ P VPSHH DV +VI ++I TMA + PTT+MH+H + + LK + ++D++ +
Sbjct: 181 SLVPDPATVPSHHAKDVNSVIRNLDIATMAVIAPTTLMHMHFINITLKDKVEKKDILSVL 240
Query: 239 ENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQ 298
ENT R++L + E+TA+++E ARDL R+ N++ E+ ++ +SI VK + + + AVHQ
Sbjct: 241 ENTPRIVLISSKYDAEATAELVEVARDLKRDRNDIPEVMIFSDSIYVKDDEVMLMYAVHQ 300
Query: 299 ESDVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
ES VVPEN+DAIRA +L E+S++ TN+SLGILK
Sbjct: 301 ESIVVPENIDAIRASMKLMSAEDSMRITNESLGILK 336
>gb|AAK40848.1| Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (gap) [Sulfolobus
solfataricus]
Length = 340
Score = 330 bits (838), Expect = 1e-89
Identities = 165/336 (49%), Positives = 237/336 (70%), Gaps = 5/336 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
+ V VNGYGTIGKRVA AI KQ DM+LVGV KT P++EA+ A GI +Y + + +F
Sbjct: 2 INVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQS-IKKF 60
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
E G V GT+ DL++ D++VD TP GVGA+ KP+Y + A+FQGGEKA VA++SF
Sbjct: 61 EESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFS 120
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYA--DYVYAVMIRRAADPNDIKRGPIN 180
A NY +ALGK Y+RVVSCNTT L+RT+ + + + + V A ++RRAAD ++K+GPIN
Sbjct: 121 ALCNYNEALGKKYIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAADQKEVKKGPIN 180
Query: 181 AIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIF 238
++ P VPSHH DV +VI ++I TMA + PTT+MH+H + + LK + ++D++ +
Sbjct: 181 SLVPDPATVPSHHAKDVNSVIRNLDIATMAVIAPTTLMHMHFINITLKDKVEKKDILSVL 240
Query: 239 ENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQ 298
ENT R++L + E+TA+++E ARDL R+ N++ E+ ++ +SI VK + + + AVHQ
Sbjct: 241 ENTPRIVLISSKYDAEATAELVEVARDLKRDRNDIPEVMIFSDSIYVKDDEVMLMYAVHQ 300
Query: 299 ESDVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
ES VVPEN+DAIRA +L E+S++ TN+SLGILK
Sbjct: 301 ESIVVPENIDAIRASMKLMSAEDSMRITNESLGILK 336
>sp|P39460|G3P_SULSO GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|2129442|pir||S63529 glyceraldehyde-3-phosphate
dehydrogenase (EC 1.2.1.12) - Sulfolobus solfataricus
>gi|996076|emb|CAA56460.1| (X80178) gap [Sulfolobus
solfataricus] >gi|6015944|emb|CAB57771.1| (Y18930)
glyceraldehyde-3-phosphate dehydrogenase [Sulfolobus
solfataricus]
Length = 340
Score = 330 bits (838), Expect = 1e-89
Identities = 165/336 (49%), Positives = 237/336 (70%), Gaps = 5/336 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
+ V VNGYGTIGKRVA AI KQ DM+LVGV KT P++EA+ A GI +Y + + +F
Sbjct: 2 INVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQS-IKKF 60
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
E G V GT+ DL++ D++VD TP GVGA+ KP+Y + A+FQGGEKA VA++SF
Sbjct: 61 EESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFS 120
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYA--DYVYAVMIRRAADPNDIKRGPIN 180
A NY +ALGK Y+RVVSCNTT L+RT+ + + + + V A ++RRAAD ++K+GPIN
Sbjct: 121 ALCNYNEALGKKYIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAADQKEVKKGPIN 180
Query: 181 AIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIF 238
++ P VPSHH DV +VI ++I TMA + PTT+MH+H + + LK + ++D++ +
Sbjct: 181 SLVPDPATVPSHHAKDVNSVIRNLDIATMAVIAPTTLMHMHFINITLKDKVEKKDILSVL 240
Query: 239 ENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQ 298
ENT R++L + E+TA+++E ARDL R+ N++ E+ ++ +SI VK + + + AVHQ
Sbjct: 241 ENTPRIVLISSKYDAEATAELVEVARDLKRDRNDIPEVMIFSDSIYVKDDEVMLMYAVHQ 300
Query: 299 ESDVVPENVDAIRAMFELADKEESIKKTNKSLGILK 334
ES VVPEN+DAIRA +L E+S++ TN+SLGILK
Sbjct: 301 ESIVVPENIDAIRASMKLMSAEDSMRITNESLGILK 336
>gb|AAF97190.1|AF268611_13 (AF268611) glyceraldehyde-3-phosphate dehydrogenase [uncultured
marine group II euryarchaeote 37F11]
Length = 345
Score = 321 bits (813), Expect = 9e-87
Identities = 166/339 (48%), Positives = 230/339 (66%), Gaps = 9/339 (2%)
Query: 1 MKVKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEE--F 58
M VKV +NGYGTIGKRVA AI QDDME++GV KT+P F A G P+Y +E
Sbjct: 1 MVVKVAINGYGTIGKRVADAIDAQDDMEIIGVTKTRPSFGCDLAVRKGYPLYCTFDEAYI 60
Query: 59 LSRFESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAE 118
++ F G++ +G L++ DV+VD +PG VGA+N +YE AG+K +FQGGEK +
Sbjct: 61 IAAFAPSGYDCKGGLSEPTRXADVVVDCSPGKVGAQNXEIYEDAGIKWIFQGGEKHAMTG 120
Query: 119 VSFVAQANYEKALGKSYVRVVSCNTTGLVRTLNAIREYADY--VYAVMIRRAADPNDIKR 176
+S+ + N+ + + K RVVSCNTTGL RTL + V MIRRAADP D +
Sbjct: 121 LSYTSSGNHSENMNKQGTRVVSCNTTGLSRTLVPLLRKCGSLSVECTMIRRAADPGDSNK 180
Query: 177 GPINAIKPSVEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKP--LTRED 233
GPINAIKP ++VPSHHGPDV T+ P I+I +MA VPTTIMHVH+++ L ++ E
Sbjct: 181 GPINAIKPVLKVPSHHGPDVMTIRPEISINSMAVAVPTTIMHVHAIVATLPDGHGMSTES 240
Query: 234 VIDIFENTTRVLLFE-KEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYY 292
V++++ + RV++ E G +TA+++EFARD+ R+W +L+EI VW++ + + GN LYY
Sbjct: 241 VLELWGSQPRVVIMNGAETGITTTAEVMEFARDIGRKWGDLHEIFVWEDGVKLDGNSLYY 300
Query: 293 IQAVHQESDVVPENVDAIRAMFEL-ADKEESIKKTNKSL 330
QA+HQESDV+PENVDAIRA+ L D E S+ KT+K++
Sbjct: 301 FQAIHQESDVIPENVDAIRALMGLETDWEVSVSKTDKAI 339
>gb|AAG18725.1| (AE004977) glyceraldehyde 3-phosphate dehydrogenase; GapB
[Halobacterium sp. NRC-1]
Length = 335
Score = 315 bits (799), Expect = 4e-85
Identities = 159/334 (47%), Positives = 221/334 (65%), Gaps = 4/334 (1%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
++VG+NGYGTIGKRVA A+ Q DM + GV KT P+FEA +A++ G +Y A E+ +F
Sbjct: 2 IRVGINGYGTIGKRVADAVAAQPDMTVAGVAKTSPNFEATQARKRGFDLYTAVEDRADQF 61
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
+ G E G ++DL+ DV+VDATP GVGA+N+ Y A++QGGE A+VA+VSF
Sbjct: 62 PAAGIETAGPVDDLIADSDVVVDATPSGVGAENRSRYAAHDTPAIYQGGEDASVADVSFN 121
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVRTLNAIREY--ADYVYAVMIRRAADPNDIKRGPIN 180
A+AN+E A +VRVVSCNTTGL R L +RE + V A ++RR DP RGPIN
Sbjct: 122 ARANFEAAADADHVRVVSCNTTGLSRLLAPLREQYGIEKVRATLVRRGGDPGQTDRGPIN 181
Query: 181 AIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVIDIF 238
I P + +PSHHGPDV T+ P ++I+T+ VP T+MH+HS+ V L++ DV D+
Sbjct: 182 DILPDPITIPSHHGPDVNTIFPDLDIDTLGMKVPATLMHMHSINVTLERDPDAADVRDVL 241
Query: 239 ENTTRVLLFEKEKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQAVHQ 298
+R++L + + G + T + E+A+D+ R +L+E +W ES+ + G Y QA+HQ
Sbjct: 242 AGQSRIMLLDDDLGIDGTGPLKEYAQDMGRPRGDLWENCLWGESVTMDGRDFYCFQAIHQ 301
Query: 299 ESDVVPENVDAIRAMFELADKEESIKKTNKSLGI 332
ESDVVPENVDA+RA+ AD ESI TN +LGI
Sbjct: 302 ESDVVPENVDAVRAIAGDADAAESIATTNDALGI 335
>sp|Q9YFS9|G3P_AERPE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH)
>gi|7431524|pir||H72772 probable glyceraldehyde
3-phosphate dehydrogenase APE0171 - Aeropyrum pernix
(strain K1) >gi|5103561|dbj|BAA79082.1| (AP000058) 346aa
long hypothetical glyceraldehyde 3-phosphate
dehydrogenase [Aeropyrum pernix]
Length = 346
Score = 311 bits (788), Expect = 8e-84
Identities = 172/340 (50%), Positives = 236/340 (68%), Gaps = 11/340 (3%)
Query: 3 VKVGVNGYGTIGKRVAYAITKQDDMELVGVVKTKPDFEAYRAKELGIPVYAANEEFLSRF 62
VKVGVNG+GTIG+RVA AIT Q DM+LVGVVK PD+ A A GIP+Y + F
Sbjct: 7 VKVGVNGFGTIGRRVALAITLQKDMKLVGVVKRTPDYAALYAASRGIPIYTPTAKEAEEF 66
Query: 63 ESVGFEVEGTLNDLLEKVDVIVDATPGGVGAKNKPLYEKAGVKAVFQGGEKANVAEVSFV 122
E G +V GTL +LL +VDV+VDATP G GAKNKPLY +AGVK V+QGGEK VAE SF
Sbjct: 67 EKRGIKVGGTLRELLARVDVVVDATPEGQGAKNKPLYREAGVKQVYQGGEKPEVAEASFS 126
Query: 123 AQANYEKALGKSYVRVVSCNTTGLVR---TLNAIREY-ADYVYAVMIRRAADPNDIKRGP 178
NYE++ G+ +RVVSCNTTGL+R TLN RE+ + V AV++RR ADP ++K+GP
Sbjct: 127 TLCNYEESKGRGSLRVVSCNTTGLLRLICTLN--REFGVESVRAVLVRRGADPKEVKKGP 184
Query: 179 INAIKPS-VEVPSHHGPDVQTVIP-INIETMAFVVPTTIMHVHSVMVELKKPLTREDVID 236
I++I + +PSHH DV+TV+P ++I+T A VPTT MH+H V ++L KP+ + +V++
Sbjct: 185 IDSIVLNPPTLPSHHAVDVRTVLPWLDIKTAAVAVPTTFMHMHHVTLKLAKPVEKREVLE 244
Query: 237 IFENTTRVLLFEK-EKGFESTAQIIEFARDLHREWNNLYEIAVWKESINVKGNRLYYIQA 295
+ R++L + G +ST+Q+++ AR L R ++ E+ V++ES+ V G + QA
Sbjct: 245 TLASAPRIMLVSSGDTGIKSTSQLVDAAR-LSRMGYDIPELVVFEESVAVDGREVMLFQA 303
Query: 296 VHQESDVVPENVDAIRAMFEL-ADKEESIKKTNKSLGILK 334
VHQES VVPEN+DAIRA+ +E++K T+ SLG+ K
Sbjct: 304 VHQESIVVPENIDAIRAVASSPLTLDETLKATDGSLGLRK 343
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.135 0.376
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118179882
Number of Sequences: 2977
Number of extensions: 4901779
Number of successful extensions: 13412
Number of sequences better than 1.0e-10: 18
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13332
Number of HSP's gapped (non-prelim): 18
length of query: 334
length of database: 189,106,746
effective HSP length: 59
effective length of query: 275
effective length of database: 153,796,013
effective search space: 42293903575
effective search space used: 42293903575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 165 (68.7 bits)