BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0260 (ogt) DE:methylated-DNA-protein-cysteine
methyltransferase (ogt)
(172 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75154 methylated-DNA--protein-cysteine S-methyltransferase... 352 1e-96
pir||D71195 methylated-DNA--protein-cysteine S-methyltransferase... 274 5e-73
pir||T44680 methylated-DNA--protein-cysteine S-methyltransferase... 175 3e-43
pir||H64490 methylated-DNA--protein-cysteine S-methyltransferase... 78 5e-14
pir||H72320 methylated-DNA--protein-cysteine S-methyltransferase... 68 5e-11
>pir||A75154 methylated-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.63)
PAB0260 [similarity] - Pyrococcus abyssi (strain Orsay)
>gi|5457822|emb|CAB49312.1| (AJ248284)
methylated-DNA-protein-cysteine methyltransferase (ogt)
[Pyrococcus abyssi]
Length = 172
Score = 352 bits (894), Expect = 1e-96
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 MLSCESFKIKGREIIICVIWEEGIQGIVYSLDGREFLEKQLSRLISMLNKRGVSLSLKER 60
MLSCESFKIKGREIIICVIWEEGIQGIVYSLDGREFLEKQLSRLISMLNKRGVSLSLKER
Sbjct: 1 MLSCESFKIKGREIIICVIWEEGIQGIVYSLDGREFLEKQLSRLISMLNKRGVSLSLKER 60
Query: 61 HSKYPELVFNVLTGKISNEEGFEELSLEGLTDFEIRVYSWLVKNVKRGEVITYGKVAKEL 120
HSKYPELVFNVLTGKISNEEGFEELSLEGLTDFEIRVYSWLVKNVKRGEVITYGKVAKEL
Sbjct: 61 HSKYPELVFNVLTGKISNEEGFEELSLEGLTDFEIRVYSWLVKNVKRGEVITYGKVAKEL 120
Query: 121 KTSALAIGGAMKRNPYPIVVPCHRVVGKKDPWLYTPKPEYKKFLLEVEGWTS 172
KTSALAIGGAMKRNPYPIVVPCHRVVGKKDPWLYTPKPEYKKFLLEVEGWTS
Sbjct: 121 KTSALAIGGAMKRNPYPIVVPCHRVVGKKDPWLYTPKPEYKKFLLEVEGWTS 172
>pir||D71195 methylated-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.63)
PH1835 [similarity] - Pyrococcus horikoshii
>gi|3258272|dbj|BAA30955.1| (AP000007) 175aa long
hypothetical methylated-DNA--protein-cysteine
methyltransferase [Pyrococcus horikoshii]
Length = 175
Score = 274 bits (693), Expect = 5e-73
Identities = 131/172 (76%), Positives = 149/172 (86%)
Query: 1 MLSCESFKIKGREIIICVIWEEGIQGIVYSLDGREFLEKQLSRLISMLNKRGVSLSLKER 60
ML+ ++FKI GREI+I V+WEE IQGI YSLDG EFL+ QLSR+ S L RGV ++L E
Sbjct: 4 MLTYKTFKILGREILIGVVWEEKIQGIAYSLDGLEFLKDQLSRVTSHLKSRGVKVNLLEE 63
Query: 61 HSKYPELVFNVLTGKISNEEGFEELSLEGLTDFEIRVYSWLVKNVKRGEVITYGKVAKEL 120
S+YP+LVF+VL GKI NE+GFEELSLEGLT FEI+VYSWLVKNVKRGEVITYGKVAK L
Sbjct: 64 KSRYPDLVFDVLKGKIGNEKGFEELSLEGLTRFEIKVYSWLVKNVKRGEVITYGKVAKAL 123
Query: 121 KTSALAIGGAMKRNPYPIVVPCHRVVGKKDPWLYTPKPEYKKFLLEVEGWTS 172
KTS +A+GGAMKRNPYPI+VPCHRVVGK +PWLYTPKP YKKFLLEVEGW S
Sbjct: 124 KTSPIAVGGAMKRNPYPIIVPCHRVVGKNNPWLYTPKPSYKKFLLEVEGWIS 175
>pir||T44680 methylated-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.63)
[validated] - Pyrococcus sp >gi|6980764|pdb|1MGT|A Chain
A, Crystal Structure Of O6-Methylguanine-Dna
Methyltransferase From Hyperthermophilic Archaeon
Pyrococcus Kodakaraensis Strain Kod1
>gi|3253067|dbj|BAA29044.1| (D86335) methylated DNA
protein cysteine methyltransferase [Pyrococcus sp.]
Length = 174
Score = 175 bits (439), Expect = 3e-43
Identities = 96/175 (54%), Positives = 115/175 (64%), Gaps = 4/175 (2%)
Query: 1 MLSCESFKIKGREIIICVIWEEGIQGIVYSLDGREFLEKQLSRLISMLNKRGVSLSLKER 60
MLS E F++ R + I VI+ +QGI ++ D R L K++ L L KRGVS+SL +
Sbjct: 1 MLSVEKFRVGERVVWIGVIFSGRVQGIAFAFD-RGTLMKRIHDLAEHLGKRGVSISLDVQ 59
Query: 61 HSKYPELVFNVLTGKISNEEGFEELSLEGLTDFEIRVYSWLVKNVKRGEVITYGKVAKEL 120
S YPE VF VL G++ N ELS EG+T FE +VY WL KNVKRG VITYG +AK L
Sbjct: 60 PSDYPEKVFKVLIGELDNASFLRELSFEGVTPFEKKVYEWLTKNVKRGSVITYGDLAKAL 119
Query: 121 KTSALAIGGAMKRNPYPIVVPCHRVVGKKDPWLYTPKPEYKKFLLEVEG---WTS 172
TS A+GGAMKRNPYPIVVPCHRVV Y+ E KKFLLE+EG WTS
Sbjct: 120 NTSPRAVGGAMKRNPYPIVVPCHRVVAHDGIGYYSSGIEEKKFLLEIEGVKEWTS 174
>pir||H64490 methylated-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.63)
- Methanococcus jannaschii >gi|1592159|gb|AAB99547.1|
(U67593) methylated-DNA-protein-cysteine
methyltransferase, putative (ogt) [Methanococcus
jannaschii]
Length = 167
Score = 78.4 bits (190), Expect = 5e-14
Identities = 41/112 (36%), Positives = 71/112 (62%), Gaps = 2/112 (1%)
Query: 58 KERHSKYPELVFNVLTGKISNEEGFEELSLE-GLTDFEIRVYSWLVKNVKRGEVITYGKV 116
++ H K E++ + +I +++ E +S + + +F +V +VK+++ G+ +TYG +
Sbjct: 44 EDEHLKVAEIILKLYFAEIDDKKVRELISYKLEVPEFTKKVLD-IVKDIEFGKTLTYGDI 102
Query: 117 AKELKTSALAIGGAMKRNPYPIVVPCHRVVGKKDPWLYTPKPEYKKFLLEVE 168
AK+L TS A+G A+KRNP P+++PCHRVV K Y+ + KKF+LE E
Sbjct: 103 AKKLNTSPRAVGMALKRNPLPLIIPCHRVVAKNSLGGYSYGLDKKKFILERE 154
>pir||H72320 methylated-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.63)
- Thermotoga maritima (strain MSB8)
>gi|4981422|gb|AAD35968.1|AE001754_5 (AE001754)
methylated-DNA-protein-cysteine methyltransferase
[Thermotoga maritima]
Length = 139
Score = 68.3 bits (164), Expect = 5e-11
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 91 TDFEIRVYSWLVKNVKRGEVITYGKVAKELKTSALAIGGAMKRNPYPIVVPCHRVVGKKD 150
T F+ RV+ V+ + GE TY ++AK+L TS A+G A+ +NP P+ +PCHRVV KK
Sbjct: 59 TPFQKRVWEE-VRKIPYGETKTYSEIAKKLGTSPRAVGQALSKNPLPLYIPCHRVVSKKG 117
Query: 151 PWLYTPKPEYKKFLLEVE 168
++ E+KK+L+++E
Sbjct: 118 LGGFSAGLEWKKYLIDLE 135
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.139 0.413
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65749231
Number of Sequences: 2977
Number of extensions: 2520721
Number of successful extensions: 5867
Number of sequences better than 1.0e-10: 5
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5862
Number of HSP's gapped (non-prelim): 5
length of query: 172
length of database: 189,106,746
effective HSP length: 52
effective length of query: 120
effective length of database: 157,985,422
effective search space: 18958250640
effective search space used: 18958250640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)