BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0280 (rbsk) DE:RIBOKINASE
(293 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75157 ribokinase PAB0280 - Pyrococcus abyssi (strain Orsay... 587 e-167
pir||G71196 probable ribokinase - Pyrococcus horikoshii >gi|3258... 473 e-132
pir||T44955 ribokinase (EC 2.7.1.15) [imported] - Pyrobaculum ae... 141 1e-32
pir||G72752 probable sugar kinase APE0012 - Aeropyrum pernix (st... 137 2e-31
pir||F69152 ribokinase - Methanobacterium thermoautotrophicum (s... 120 2e-26
emb|CAB75572.1| (AJ243655) hypothetical protein [Methanobacteriu... 116 4e-25
emb|CAB66287.1| (AL136519) carbohydrate kinase [Streptomyces coe... 109 3e-23
pir||C69113 ribokinase - Methanobacterium thermoautotrophicum (s... 109 5e-23
pir||B83403 ribokinase PA1950 [imported] - Pseudomonas aeruginos... 106 3e-22
gi|11497968 carbohydrate kinase, pfkB family [Archaeoglobus fulg... 103 2e-21
sp|O27587|YF44_METTH HYPOTHETICAL SUGAR KINASE MTH1544 >gi|74300... 100 2e-20
sp|P44331|RBSK_HAEIN RIBOKINASE >gi|1075217|pir||B64073 ribokina... 100 3e-20
dbj|BAB07447.1| (AP001519) ribokinase [Bacillus halodurans] 99 7e-20
pir||D75260 probable carbohydrate kinase - Deinococcus radiodura... 99 7e-20
gb|AAG20057.1| (AE005085) sugar kinase; Suk [Halobacterium sp. N... 99 7e-20
gb|AAK40370.1| Ribokinase (rbsK-1) [Sulfolobus solfataricus] 98 2e-19
pir||E72516 probable ribokinase APE2106 - Aeropyrum pernix (stra... 98 2e-19
pir||D82497 ribokinase VCA0131 [imported] - Vibrio cholerae (gro... 98 2e-19
pir||T20529 hypothetical protein F07A11.5 - Caenorhabditis elega... 94 1e-18
sp|P42414|IOLC_BACSU IOLC PROTEIN >gi|7475652|pir||C69645 myo-in... 93 4e-18
sp|O60116|RBSK_SCHPO PUTATIVE RIBOKINASE >gi|7493292|pir||T39594... 93 4e-18
dbj|BAB06038.1| (AP001515) myo-inositol catabolism [Bacillus hal... 92 6e-18
sp|Q57849|Y406_METJA HYPOTHETICAL SUGAR KINASE MJ0406 >gi|212924... 92 9e-18
pir||E72311 ribokinase - Thermotoga maritima (strain MSB8) >gi|4... 90 2e-17
emb|CAA04719.1| (AJ001389) RBSK [Rhizobium etli] 88 1e-16
gb|AAD50017.1|AC007651_12 (AC007651) Similar to ribokinase [Arab... 86 4e-16
pir||T07588 fructokinase (EC 2.7.1.4) 1 - tomato >gi|2102691|gb|... 85 7e-16
dbj|BAB11252.1| (AB010074) fructokinase 1 [Arabidopsis thaliana] 85 7e-16
dbj|BAB07443.1| (AP001519) 2-keto-3-deoxygluconate kinase [Bacil... 85 9e-16
gb|AAF35840.1|AF205034_3 (AF205034) ScrK [Clostridium acetobutyl... 82 6e-15
sp|P05054|RBSK_ECOLI RIBOKINASE >gi|66667|pir||KIECRB ribokinase... 82 8e-15
sp|O59128|YE59_PYRHO HYPOTHETICAL SUGAR KINASE PH1459 >gi|743422... 82 1e-14
dbj|BAB16906.1| (AP002863) contains ESTs AU029689(EE1266),C91697... 81 1e-14
pir||T01971 fructokinase (EC 2.7.1.4) - Arabidopsis thaliana >gi... 80 2e-14
gb|AAK42589.1| Ribokinase (rbsK-2) [Sulfolobus solfataricus] 80 3e-14
gb|AAF79436.1|AC025808_18 (AC025808) F18O14.35 [Arabidopsis thal... 78 1e-13
dbj|BAB05576.1| (AP001513) fructokinase [Bacillus halodurans] 77 2e-13
pir||T46874 ribokinase homolog [imported] - Sulfolobus solfatari... 77 3e-13
gb|AAC98130.1| (AF098273) 2-keto-3-deoxy-gluconate kinase [Bacil... 74 2e-12
pir||E75385 carbohydrate kinase, PfkB family - Deinococcus radio... 74 2e-12
pir||A75599 ribokinase - Deinococcus radiodurans (strain R1) >gi... 74 2e-12
gi|11545855 ribokinase [Homo sapiens] >gi|10799803|emb|CAC12877.... 74 2e-12
gb|AAG12908.1|AC020665_17 (AC020665) fructokinase, putative; 800... 73 3e-12
gb|AAF80125.1|AC024174_7 (AC024174) Contains similarity to a fru... 73 4e-12
pir||G75112 fructokinase (EC 2.7.1.4) PAB0482 - Pyrococcus abyss... 73 5e-12
sp|P40713|SCRK_ECOLI FRUCTOKINASE >gi|1073355|pir||S52161 probab... 72 9e-12
gb|AAF80126.1|AC024174_8 (AC024174) Contains similarity to a fru... 72 9e-12
sp|P36945|RBSK_BACSU RIBOKINASE >gi|7427979|pir||D69690 ribokina... 70 3e-11
pir||T49289 fructokinase-like protein - Arabidopsis thaliana >gi... 70 3e-11
gi|10383797 ribokinase; Rbk1p [Saccharomyces cerevisiae] 70 3e-11
sp|P25332|RBSK_YEAST PROBABLE RIBOKINASE >gi|279503|pir||KIBYRB ... 69 6e-11
pir||D64937 probable sugar kinase (EC 2.7.1.-) - Escherichia col... 69 6e-11
gb|AAB51108.1| (U62329) fructokinase [Lycopersicon esculentum] >... 69 6e-11
sp|P77493|YDJH_ECOLI HYPOTHETICAL SUGAR KINASE IN ANSA-GAPA INTE... 69 6e-11
pir||A82433 fructokinase VCA0656 [imported] - Vibrio cholerae (g... 69 6e-11
gb|AAK43293.1| Fructokinase [Sulfolobus solfataricus] 69 8e-11
sp|P37829|SCRK_SOLTU FRUCTOKINASE >gi|626018|pir||S39997 fructok... 69 8e-11
sp|O34768|YDJE_BACSU HYPOTHETICAL SUGAR KINASE IN GUTA-COTA INTE... 69 8e-11
pir||H72394 fructokinase - Thermotoga maritima (strain MSB8) >gi... 69 8e-11
pir||D75288 carbohydrate kinase, PfkB family - Deinococcus radio... 69 8e-11
>pir||E75157 ribokinase PAB0280 - Pyrococcus abyssi (strain Orsay)
>gi|5457850|emb|CAB49340.1| (AJ248284) RIBOKINASE
[Pyrococcus abyssi]
Length = 293
Score = 587 bits (1497), Expect = e-167
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG
Sbjct: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGANRWKEVNT 120
AVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGANRWKEVNT
Sbjct: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGANRWKEVNT 120
Query: 121 EYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKELDILMMNEDEF 180
EYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKELDILMMNEDEF
Sbjct: 121 EYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKELDILMMNEDEF 180
Query: 181 KAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGF 240
KAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGF
Sbjct: 181 KAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGF 240
Query: 241 LYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELKLNLPI 293
LYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELKLNLPI
Sbjct: 241 LYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELKLNLPI 293
>pir||G71196 probable ribokinase - Pyrococcus horikoshii
>gi|3258283|dbj|BAA30966.1| (AP000007) 296aa long
hypothetical ribokinase [Pyrococcus horikoshii]
Length = 296
Score = 473 bits (1203), Expect = e-132
Identities = 228/292 (78%), Positives = 263/292 (89%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
MR DVICMGNLNYDI F++E+FP HEKVNAK V+TGLGGSAGNTATWL+ LGLKVGFIG
Sbjct: 1 MRLDVICMGNLNYDITFILERFPEFHEKVNAKEVYTGLGGSAGNTATWLSLLGLKVGFIG 60
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGANRWKEVNT 120
+VGNDDFGRLHLEFF++IGVDT GIKVV++ TG+AV MV GEDKRIVKYPGANR+KEV
Sbjct: 61 SVGNDDFGRLHLEFFKKIGVDTRGIKVVDEPTGVAVMMVIGEDKRIVKYPGANRFKEVRE 120
Query: 121 EYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKELDILMMNEDEF 180
+YLK ARHLHLSSNP+ L+ +AV AK LGLTVSFDPGEMEVP+++E+++DILMMNEDEF
Sbjct: 121 DYLKLARHLHLSSNPLSLVEKAVTLAKNLGLTVSFDPGEMEVPKNIEEKVDILMMNEDEF 180
Query: 181 KAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGF 240
K KYG L I VK+RIAIATLNGGGALVRD+ G+V+EVRGLSAKA+DTTGGGD+FNAGF
Sbjct: 181 KRKYGDLKNITKVKSRIAIATLNGGGALVRDQNGKVYEVRGLSAKAVDTTGGGDSFNAGF 240
Query: 241 LYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELKLNLP 292
+YGFL+GWDVV+SAKLGMLLAYLTVQ+VGARSAV PL+E+KK A EL L+LP
Sbjct: 241 IYGFLNGWDVVSSAKLGMLLAYLTVQKVGARSAVIPLEEVKKKANELNLDLP 292
>pir||T44955 ribokinase (EC 2.7.1.15) [imported] - Pyrobaculum aerophilum
>gi|4099074|gb|AAD00536.1| (U82374) ribokinase
[Pyrobaculum aerophilum]
Length = 305
Score = 141 bits (351), Expect = 1e-32
Identities = 99/301 (32%), Positives = 150/301 (48%), Gaps = 20/301 (6%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V +GNLN+DI + + PG E V A ++TG GGSA N A +AK+GL FIGAVG
Sbjct: 3 VASIGNLNFDIYLKVSELPGPDENVEALDLYTGGGGSAANFAVAIAKMGLSARFIGAVGE 62
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVKGED-KRIVKYPGANRW---KEVN 119
D G + L R GVD S +K V +G+ V +V + KR+V Y GAN ++
Sbjct: 63 DPLGEISLRELRAEGVDVSFVKRVRGVRSGVVVVLVHPDGVKRMVSYRGANLGLTPADLT 122
Query: 120 TEYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGE------MEVPRDVEKELDIL 173
+ +H+HL++ ELI +A E A+E+G ++S D G +E+ R + +D++
Sbjct: 123 VDKFAGVKHIHLATGRTELILKAKEIAREIGASISVDGGTALARKGLEIVRAAVEGVDVV 182
Query: 174 MMNEDEFKAKYGSLDR-------IKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKA 226
MN E + + D +++K + TL GA V + G + V A
Sbjct: 183 FMNHVEAQLVANAGDHKSAVEKLARELKVGELVVTLGPIGA-VAFKNGRLLHVDAFKVNA 241
Query: 227 IDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQE 286
+DTTG GD F A ++ +L G D+ A + V AR++ R DE+ +
Sbjct: 242 VDTTGAGDCFAAAYITMYLRGRDLYERLLFANAAAAIKVTRPSARASPR-YDEVVAFLES 300
Query: 287 L 287
L
Sbjct: 301 L 301
>pir||G72752 probable sugar kinase APE0012 - Aeropyrum pernix (strain K1)
>gi|5103400|dbj|BAA78921.1| (AP000058) 310aa long
hypothetical sugar kinase [Aeropyrum pernix]
Length = 310
Score = 137 bits (341), Expect = 2e-31
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 18/303 (5%)
Query: 6 ICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGND 65
+ +G+ D+ +E+ PG+ E+ K +GGSA N A L +LG++ G IG +G D
Sbjct: 9 VAVGHALVDLRLYVERIPGVDEEAVIKDETRSVGGSAANVAVVLRRLGVQSGIIGKIGLD 68
Query: 66 DFGRLHLEFFREIGVDTSGIKV-VNDATGIAVTMVKGEDK-RIVKYPGANRW---KEVNT 120
DFGR+ ++ GVD SG++V + D TG +V + E I + GA E++
Sbjct: 69 DFGRIAVDNLMREGVDISGLRVSLRDRTGFSVVVRDKEGSITIYSFKGAAEKLEPGEIDA 128
Query: 121 EYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGEM------EVPRDVEKELDILM 174
+ + R++H+H++S + + VE AK+ +TVS+DPG + E ++ ++DI+
Sbjct: 129 DAIGRSKHVHVASLRPDTTLKTVEIAKKRSITVSWDPGRVLSKMGAERLANIISKVDIIF 188
Query: 175 MNEDEFKAKYGSLD------RIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAID 228
+N +E K G D +K + +I + L G+ + GEV + +D
Sbjct: 189 VNRNEAKNLTGYHDYRQAARHLKKLGPKIVVIKLGASGSYILYSDGEVFVPAIKPERVVD 248
Query: 229 TTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELK 288
TTG GD++ AGF+ G L G+ + ++ ++A + V +G+ +A +E+ + A+EL
Sbjct: 249 TTGAGDSYAAGFIAGLLRGYTIEKASLYATIVASIKVSRLGSNAAPSH-EEVVEKARELG 307
Query: 289 LNL 291
+ +
Sbjct: 308 VEI 310
>pir||F69152 ribokinase - Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621467|gb|AAB84910.1| (AE000825) ribokinase
[Methanobacterium thermoautotrophicum]
Length = 298
Score = 120 bits (299), Expect = 2e-26
Identities = 94/287 (32%), Positives = 137/287 (46%), Gaps = 14/287 (4%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
MRFD + +G LN D + ++E+ G E+ +G+ GGSA NT L++LGL+ IG
Sbjct: 1 MRFDAVGLGALNMDQLHMVERIAGPDEETFVRGLVESCGGSAANTMIGLSRLGLRTAHIG 60
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKY-PGAN---RWK 116
V +D G L GV + +G + V + R + PG N R
Sbjct: 61 KVADDREGGLLRSNLSSEGVTDFTVVADTGRSGRVMGFVDPDGNRALYVDPGVNDTLRVD 120
Query: 117 EVNTEYLKRARHLHLSSNPIELIREAVE--KAKELGLTVSFDPGEMEVPR------DVEK 168
EV E L LHL+S + I VE +A + +TVS DPG + R D+ +
Sbjct: 121 EVADEAL-NTELLHLTSFAGDGINVQVEVIEALDESVTVSLDPGHIYASRGVSELSDILE 179
Query: 169 ELDILMMNEDEFKAKYGSLDRIKDVK-ARIAIATLNGGGALVRDEKGEVHEVRGLSAKAI 227
DIL+ N+ E + GS D + I + + G VR GE V LS + +
Sbjct: 180 RTDILLTNQRELELMTGSADPEEAASLLGIGVVVVKMGARGVRAWDGESVMVDALSTECV 239
Query: 228 DTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAV 274
DTTG GDAFNAGF+Y +L G+ + S + G +A + GA ++
Sbjct: 240 DTTGAGDAFNAGFIYAWLEGFGLEVSCRFGNYIASRCIGGYGATESL 286
>emb|CAB75572.1| (AJ243655) hypothetical protein [Methanobacterium
thermoautotrophicum]
Length = 312
Score = 116 bits (287), Expect = 4e-25
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 16/288 (5%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
M FD + +G LN D + ++E+ G E+V + + GGSA NT LA+LGL+ FIG
Sbjct: 1 MLFDAVGLGALNMDQLHMVERIAGPDEEVFVRSILESCGGSAANTIIGLARLGLRTAFIG 60
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKY-PGAN---RWK 116
V D G + E + GV +G + V + R + PG N
Sbjct: 61 KVAGDREGSILRENLKGGGVADYVAVSDEGRSGRVMGFVDPQGNRALYVDPGVNDTLSMD 120
Query: 117 EVNTEYLKRARHLHLSS---NPIELIREAVEKAKELGLTVSFDPGEMEVPR------DVE 167
EV E LK R LHL+S + I + RE + + +TVS DPG + R +
Sbjct: 121 EVREEALK-TRLLHLTSFAGSGIRVQREVLGVIDD-SVTVSLDPGHLYAERGASELEGIL 178
Query: 168 KELDILMMNEDEFKAKYGSLD-RIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKA 226
+ DIL++N E + GS D + + + + + G VR G V L
Sbjct: 179 ERTDILLVNRRELEILTGSPDPAMASAELGVDVVVMKMGSEGVRAFDGSEVMVEALETSC 238
Query: 227 IDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAV 274
DTTG GDAFNAGFLY +LSG + S G +A ++ GA S++
Sbjct: 239 RDTTGAGDAFNAGFLYAWLSGHGLEVSCLFGNYMASRCIEGYGATSSL 286
>emb|CAB66287.1| (AL136519) carbohydrate kinase [Streptomyces coelicolor A3(2)]
Length = 306
Score = 109 bits (271), Expect = 3e-23
Identities = 87/289 (30%), Positives = 129/289 (44%), Gaps = 19/289 (6%)
Query: 3 FDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAV 62
+D++ +G+ N D+V +E+ P E V + GG GN A A+LG + + V
Sbjct: 4 YDLLVVGSANADLVIGVERRPAAGETVLGSDLAVHPGGKGGNQAVAAARLGARTALLARV 63
Query: 63 GNDDFGRLHLEFFREIGVDTSGIKVVNDATGIA-VTMVKGEDKRIVKYPGANRWKEVNTE 121
G+DD+GRL L+ R GVDT G+ V TG+A +T+ D IV PGAN + +
Sbjct: 64 GDDDYGRLLLDSQRAAGVDTVGVLVGGAPTGVALITVDPSGDNSIVVSPGAN-GRLAPGD 122
Query: 122 YLKRARHLHLS-------SNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKELDILM 174
A H S P+E + E V V +P++V D L+
Sbjct: 123 VRAAASLFHASRVVSTQLEIPLETVVEVVRSLAPDSRFVLNPSPPRPLPQEVLTACDPLI 182
Query: 175 MNEDEFKAKYGSL---DRIKD-------VKARIAIATLNGGGALVRDEKGEVHEVRGLSA 224
+NE E K G +R +D R + TL GALV G V V +
Sbjct: 183 VNEHEAKVILGDSLVGERPEDWARVLLAKGPRSVVVTLGAEGALVASAAGGVVRVPSVKV 242
Query: 225 KAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSA 273
A+DTTG GDAF A + +G + ++A + V + GA+ +
Sbjct: 243 DAVDTTGAGDAFTAALAWRLGTGESLADAAAYAARVGAAAVTKAGAQES 291
>pir||C69113 ribokinase - Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622976|gb|AAB86307.1| (AE000937) ribokinase
[Methanobacterium thermoautotrophicum]
Length = 278
Score = 109 bits (269), Expect = 5e-23
Identities = 82/280 (29%), Positives = 129/280 (45%), Gaps = 20/280 (7%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+ +G N D +F +++F ++ + GGSA N A W++ LG + A G
Sbjct: 4 VVSVGTCNMDFIFRVQEFVEPDSEMYIDDIHILPGGSALNFAVWISALGFSSDIVAATGG 63
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKR-IVKYPGANRWKEVNT--- 120
D +G + GV T + VV TG+A V G +R I Y GAN E+ T
Sbjct: 64 DMYGEIIRSRLESEGVSTGCLSVVEKPTGMAFISVDGSGRRSIYSYMGANAELEIGTPEG 123
Query: 121 EYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGE------MEVPRDVEKELDILM 174
++ A +HLS +E+ + E + V F PG ++V V ++ ++L
Sbjct: 124 RCIRAADAVHLSGCYVEVAQRVAEIRE-----VYFSPGRLLAGYGLDVLEPVLRKTEVLF 178
Query: 175 MNEDEFKAKYGS----LDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTT 230
+N+DE + GS + R+ V + T GGA + E++ A AIDTT
Sbjct: 179 LNDDELEILTGSRKSGISRLLGVGVDYVVVTHGPGGASFFSADHSL-EMKVEDAGAIDTT 237
Query: 231 GGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGA 270
G GDAF AGF+ +L G++ + + G A + GA
Sbjct: 238 GAGDAFAAGFMSEWLRGYEPLECLRGGHRAALKVISRFGA 277
>pir||B83403 ribokinase PA1950 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9947947|gb|AAG05338.1|AE004621_9 (AE004621)
ribokinase [Pseudomonas aeruginosa]
Length = 308
Score = 106 bits (263), Expect = 3e-22
Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 30/307 (9%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
M+ V+ +G+LN D+V + P E + + T GG N A A+LG +V IG
Sbjct: 1 MQAKVLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAEVAMIG 60
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGI-KVVNDATGIAVTMVKGEDKR-IVKYPGANRWKEV 118
+G+D +G + G+D G+ +V +++G+A+ +V + IV G N
Sbjct: 61 CLGDDAYGDQLYRALQAEGIDCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNG---- 116
Query: 119 NTEYLKRARHLHL----------SSNPIELIREAVEKAKELGLTVSFD--PGEMEVPRDV 166
+ ARH HL +P+E + + +A LG TV + P +VP +
Sbjct: 117 HLSPAVLARHEHLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPAEW 176
Query: 167 EKELDILMMNE-----------DEFKAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGE 215
+D L+ NE D ++ + +R++++ A I TL GAL+ E G
Sbjct: 177 LPLVDYLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGE-GR 235
Query: 216 VHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVR 275
V KA+DTT GD F GF G D + + G A ++V +GA++++
Sbjct: 236 VEHFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIP 295
Query: 276 PLDEIKK 282
+E+++
Sbjct: 296 SREEVER 302
>gi|11497968 carbohydrate kinase, pfkB family [Archaeoglobus fulgidus]
>gi|3915361|sp|O29891|Y356_ARCFU HYPOTHETICAL SUGAR
KINASE AF0356 >gi|7430035|pir||D69294 carbohydrate
kinase, pfkB family homolog - Archaeoglobus fulgidus
>gi|2650279|gb|AAB90880.1| (AE001080) carbohydrate
kinase, pfkB family [Archaeoglobus fulgidus]
Length = 250
Score = 103 bits (255), Expect = 2e-21
Identities = 76/245 (31%), Positives = 123/245 (50%), Gaps = 21/245 (8%)
Query: 49 LAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKR-IV 107
L++LG++ +IG VG+D+ GR+ L F GV T + +G A+ V + R I+
Sbjct: 3 LSRLGIETAYIGKVGSDEEGRILLADFEREGVSTDFVIRAEGRSGTAMIFVDEKGNRAIL 62
Query: 108 KYPGAN---RWKEVNTEYLKRARHLHLSS----NPIELIREAVEKAKELGLTVSFDPGEM 160
PG N + E++ + ++ +HL+S N ++ + +E +VSFDPG
Sbjct: 63 VDPGVNDTIAYDEIDVDSARKYDLIHLTSFICKNGLDSLNSQKRIVEEFD-SVSFDPGMP 121
Query: 161 EVPR---DVEKELD---ILMMNEDEFKAKYG-----SLDRIKDVKARIAIATLNGGGALV 209
R D+EK L I + N E + + + +R ++ I L G +
Sbjct: 122 YAERGLGDMEKILKNTTIFLPNRQEIEMLFSEDYRTAAERCIEMGIEIVAVKLGSEGCWI 181
Query: 210 RDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVG 269
+ EV V+ +S K +DTTG GDAFNAGFLYG+L G D+ +LG +A +++ G
Sbjct: 182 KKGDREV-TVKPVSTKVVDTTGAGDAFNAGFLYGYLKGKDIEECGRLGNFVAAKCIEKYG 240
Query: 270 ARSAV 274
AR +
Sbjct: 241 AREGL 245
>sp|O27587|YF44_METTH HYPOTHETICAL SUGAR KINASE MTH1544 >gi|7430033|pir||A69073
ribokinase - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622665|gb|AAB86018.1| (AE000915)
ribokinase [Methanobacterium thermoautotrophicum]
Length = 309
Score = 100 bits (246), Expect = 2e-20
Identities = 76/294 (25%), Positives = 139/294 (46%), Gaps = 17/294 (5%)
Query: 4 DVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVG 63
D++ +G+ +D + +++FP + K + GG+A N A ++LGL+ + AVG
Sbjct: 6 DLLAVGHTAFDYIIHLDEFPEPNTSTAIKRMRNLHGGAAANVALVGSRLGLRTSLVSAVG 65
Query: 64 NDDFGRLHLEFFREIGVD-TSGIKVVNDATGIAVTMVKGEDKRI-VKYPGANRW---KEV 118
D G + E G+D S I V +++T A M + +I Y GA R+ E
Sbjct: 66 GDFEGSEYRELLESSGIDIESMILVADESTPTAFVMTDSDHNQISYFYWGAARYFKDAET 125
Query: 119 NTEYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGE---MEVPRDVEKEL---DI 172
+ +K AR +HL++ E A+ LG +SFDPG+ M +E+ + DI
Sbjct: 126 PADAIKSARAVHLATGDPSFNCRCGEFARSLGKIISFDPGQDLHMYSRSQLERAVGVCDI 185
Query: 173 LMMNEDEFKAKYGSLD----RIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAID 228
L N E L ++++ + + T G+++ + +V ++ + +A+D
Sbjct: 186 LFGNHHEIDRICSKLSVDIHGLREMGPGVVVKTYGKEGSIIYSD--DVIKIDAIPREAVD 243
Query: 229 TTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKK 282
TG GD++ AGF+ +L G D+ + +A V++ G ++ + E K
Sbjct: 244 PTGAGDSYRAGFMRAYLRGADLKTCGRFASAVASFIVEDEGTQTNIPDTGEAVK 297
>sp|P44331|RBSK_HAEIN RIBOKINASE >gi|1075217|pir||B64073 ribokinase (EC 2.7.1.15) -
Haemophilus influenzae (strain Rd KW20)
>gi|1573486|gb|AAC22163.1| (U32732) ribokinase (rbsK)
[Haemophilus influenzae Rd]
Length = 306
Score = 99.8 bits (245), Expect = 3e-20
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 21/294 (7%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
MR + +G++N D V + F E + + GG N A A+LG KV FI
Sbjct: 1 MRKTLTVLGSINADHVISVPYFTKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFIS 60
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVN-DATGIA-VTMVKGEDKRIVKYPGANRW--- 115
+G+D G+ F + G+DT+ I V+ + TG+A + + K + IV GAN
Sbjct: 61 CIGSDSIGKTMKNAFAQEGIDTTHINTVSQEMTGMAFIQVAKSSENSIVLASGANSHLSE 120
Query: 116 ---KEVNTEYLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRD-VEKELD 171
++ + + L P+ + A + AK+ G+ V +P ++ D + +D
Sbjct: 121 MVVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLNPAPAQILSDELLSLID 180
Query: 172 ILMMNEDEFKAKYG--SLDRIKDVKA---------RIAIATLNGGGALVRDEKGEVHEVR 220
I+ NE E + G D VKA + TL G V KG+ ++
Sbjct: 181 IITPNETEAEILTGVEVADEQSAVKAASVFHDKGIETVMITLGAKGVFV-SRKGKSRIIK 239
Query: 221 GLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAV 274
G +AIDTT GD FN GF+ L + + G A ++V + GA+S++
Sbjct: 240 GFCVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSI 293
>dbj|BAB07447.1| (AP001519) ribokinase [Bacillus halodurans]
Length = 294
Score = 98.7 bits (242), Expect = 7e-20
Identities = 78/293 (26%), Positives = 126/293 (42%), Gaps = 16/293 (5%)
Query: 4 DVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVG 63
++ +G++N D+V + + P E V K T GG N A A+LG V IG VG
Sbjct: 5 NITVVGSINMDMVTITDVVPVQGETVLGKDFRTVPGGKGANQAVAAARLGANVRMIGRVG 64
Query: 64 NDDFGRLHLEFFREIGVDTSGIKVVNDAT-GIAVTMVKGEDKRIVKYPGANRWKEVNTEY 122
+D FG + E + G+ T +K V D T G+A ++ D RI+ GAN + V +Y
Sbjct: 65 DDPFGHVLTENLAKEGIITDSVKPVTDCTSGVATILLSDRDNRIIVTKGAN--EHVTPDY 122
Query: 123 LKRARHLHLSSN--------PIELIREAVEKAKELGLTVSFDPG-EMEVPRDVEKELDIL 173
+ +S+ P+E + +E + +T +P ++P + +
Sbjct: 123 VAAFEQELAASDVVLLQLEIPLETVAYVLEFCAKHHVTTVLNPAPAQKLPDAAWTDATYI 182
Query: 174 MMNEDEFKAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGG 233
NE+E +G D R + G + E E +V + +DTTG G
Sbjct: 183 SPNENECLQLFGD---EPDANLRQKLIMTKGADGVQFYENDEQVQVESFRVEPVDTTGAG 239
Query: 234 DAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQE 286
D FN F L G V + + A L+VQ GA+ + +++ QE
Sbjct: 240 DTFNGAFAVA-LGGGTVKEAVRFANAAAALSVQSFGAQGGMPTKAQVQSFLQE 291
>pir||D75260 probable carbohydrate kinase - Deinococcus radiodurans (strain R1)
>gi|6460378|gb|AAF12093.1|AE002084_6 (AE002084)
carbohydrate kinase, putative [Deinococcus radiodurans]
Length = 343
Score = 98.7 bits (242), Expect = 7e-20
Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 29/266 (10%)
Query: 39 GGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTM 98
GGSA N A W A+LG F+G +G D FG L R GV + TG+ + +
Sbjct: 46 GGSAANLAVWAARLGAPTTFVGKIGQDRFGELATAELRAEGVRAEVLASAAHPTGVILAL 105
Query: 99 VKGEDKRIVKYPGANRW----KEVNTEYLKRARHLHLSS------NPIELIREAVEKAKE 148
+ +R + W +E+ + L A HLHL++ P EA AK
Sbjct: 106 IDRRGQRAMLTGQGADWELLPEELPRDVLSSAGHLHLTAWSLFRDPPRAAALEAARIAKA 165
Query: 149 LGLTVSFDPGEMEVPRDVEKE----------LDILMMNEDEFKAKYGSLD--------RI 190
G T+S DPG ++ + + +E D++ N+DE +A G D R
Sbjct: 166 GGATLSLDPGSFQMIQQLGREAFLNIVDALPFDVMFPNDDEARAMSGERDNEAALTWLRA 225
Query: 191 KDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDV 250
+ +A IA+ ++ GAL+ + +V +D TG GDAF FL +L D
Sbjct: 226 RYPRALIAL-KMDEDGALIEGPQTARVQVPATRDPLVDATGAGDAFGGAFLSQWLRHHDA 284
Query: 251 VNSAKLGMLLAYLTVQEVGARSAVRP 276
+A++ + + V GAR P
Sbjct: 285 ERAARVAVQVGGWVVSRFGARPPADP 310
>gb|AAG20057.1| (AE005085) sugar kinase; Suk [Halobacterium sp. NRC-1]
Length = 295
Score = 98.7 bits (242), Expect = 7e-20
Identities = 87/284 (30%), Positives = 125/284 (43%), Gaps = 21/284 (7%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+ G++N+D+ ++ P + GGSA N A LA + G +G+VG+
Sbjct: 4 VVAAGHVNWDVTLRVDALPEPDGEAEIVSQRRSGGGSAANVACALAGFDIDAGLVGSVGD 63
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVND-ATGIAVTMVKGE-DKRIVKYPGANRWKEVNTEY 122
D+ G L + GVD +G++VV+ T + +V + ++ GAN + V
Sbjct: 64 DEHGLLAQRELQAAGVDLAGLRVVDGLETSVKYLLVDSRGEVMVLGNDGAN--EAVAPGD 121
Query: 123 LKRA------RHLHLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKEL---DIL 173
L A H+HL+S A+E TVSFDPG RD L DIL
Sbjct: 122 LDPAVVGADCEHVHLTSQRPATAARLTALAREHDATVSFDPGRRLRDRDYGDALARTDIL 181
Query: 174 MMNEDEFKAKYGSLDRIKDVKA----RIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDT 229
+N++E A LD A R+ + GA V G V G + +DT
Sbjct: 182 FVNDNEAGA---VLDDDGGPTAPDSDRVVVVKHGSEGATVHTPSGSVTH-PGFAVDPVDT 237
Query: 230 TGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSA 273
TG GDAF AGF+ L G D + + G L Q GAR+A
Sbjct: 238 TGAGDAFAAGFVAVVLDGGDHERALEFGNACGALAAQHEGARTA 281
>gb|AAK40370.1| Ribokinase (rbsK-1) [Sulfolobus solfataricus]
Length = 293
Score = 97.5 bits (239), Expect = 2e-19
Identities = 88/296 (29%), Positives = 138/296 (45%), Gaps = 20/296 (6%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
+I +G+ N D++ + K P I E V A ++ GG N A ++LG V I AVG+
Sbjct: 2 IIVVGSYNVDVILKVNKIPEIGETVIADELYITHGGKGSNQAVSASRLGSHVKIIVAVGD 61
Query: 65 DDFGRLHLEFFREIGVDTSGIKV---VNDATGIAVTMVKGEDKRIVKYPGANRWKEVNTE 121
D G +EF++ +D S +KV +N T KG + IV GAN + ++ +
Sbjct: 62 DKHGTDAIEFWKSENIDVSKVKVKSGINTGTAYIFVDKKGRN-IIVVNRGANYY--LSED 118
Query: 122 YLKRARHLHLSSNPIELIREAVEK--AKELGLTVSFDPGEMEV-PRDVEKELDILMMNED 178
L + + +E IRE+V K AKE +P + ++ +DI+ NE
Sbjct: 119 DLNNSLEGDILLMQLE-IRESVVKKAAKEFNGIKILNPAPANLKDTEILSLVDIITPNEI 177
Query: 179 EFKA-------KYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTG 231
EFK +YG +K VK + I TL GAL+ G+ + ID TG
Sbjct: 178 EFKELVNTDDFEYGLNLLLKKVK-KAVIVTLGERGALLATRDGKKVLIPAPKVNVIDETG 236
Query: 232 GGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQEL 287
GD FNA G+D+ + + +A L+V ++GA LDE+ + +E+
Sbjct: 237 AGDVFNAALSVYLEKGYDLETAVEYANKVAALSVTKIGALGP--KLDEVVRFLEEI 290
>pir||E72516 probable ribokinase APE2106 - Aeropyrum pernix (strain K1)
>gi|5105805|dbj|BAA81117.1| (AP000063) 313aa long
hypothetical ribokinase [Aeropyrum pernix]
Length = 313
Score = 97.5 bits (239), Expect = 2e-19
Identities = 81/270 (30%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 6 ICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGND 65
I +GN+N DI +++ PG E V A+ + G+GG+A N A +A+LG K + G +
Sbjct: 12 IAVGNINLDISLSVDRLPGPEEVVFARDAWIGVGGAATNYAIAVAQLGQKPVLVAVAGRE 71
Query: 66 DFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGED--KRIVKYPGANR--WKEVNTE 121
++ R GVD S +K V+ +G+ V MV D + +V GAN K + E
Sbjct: 72 MERLGVVDTLRRRGVDVSRVKTVDRPSGVVVVMVVASDSHRSMVSMRGANEELLKYIEEE 131
Query: 122 YLKRAR---HLHLSSNPIELIREAVEKAKELGLTVSFDPG--EMEVPRDVEKEL---DIL 173
L H+H++S P + + A G T+S+DPG + P+ + L D +
Sbjct: 132 PLDGVSGECHVHMASVPPQALDFAPG-----GCTLSYDPGGEAFKRPKSLWSRLPRVDWM 186
Query: 174 MMNEDEFKAKYGSLD-----RIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAID 228
+N E K GS D R+ + + + GGA V + V R + +D
Sbjct: 187 FINTPELKGMSGSGDLAAAYRLLESGLKRLVLKHGRGGATVVERGFCVTLDRTPVLEPVD 246
Query: 229 TTGGGDAFNAGFLYGFLSGWDVVNSAKLGM 258
TG GDAF+A F +GW V + +L +
Sbjct: 247 VTGAGDAFDAAFNIAVKAGWSVEEALRLAV 276
>pir||D82497 ribokinase VCA0131 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9657519|gb|AAF96045.1| (AE004354) ribokinase
[Vibrio cholerae]
Length = 306
Score = 97.5 bits (239), Expect = 2e-19
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 21/302 (6%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
++ +G++N D V + FP E ++ + GG N A A++ VGFI VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQADVGFIACVGD 63
Query: 65 DDFGRLHLEFFREIGVDTSGIKV-VNDATGIAVTMVKGEDKRIVKYPGANRWK------E 117
D FG E F+ G++T+G+K+ N TGIA+ V + + K E
Sbjct: 64 DSFGINIRESFKLDGINTAGVKLQPNCPTGIAMIQVSDSGENSICISAEANAKLTAAAIE 123
Query: 118 VNTEYLKRARHLHLS-SNPIELIREAVEKAKELGLTVSFDPG-EMEVPRDVEKELDILMM 175
+ ++ AR+L + P++ I +A ++AK V +P E+P ++ K +D++
Sbjct: 124 PDLAAIRDARYLLMQLETPLDGILKAAQEAKTAKTNVILNPAPARELPDELLKCVDLITP 183
Query: 176 NEDEFKAKYG-----------SLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSA 224
NE E + G + D + I I TL G + + G + G
Sbjct: 184 NETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITLGSKGVWL-SQNGRGQRIPGFVV 242
Query: 225 KAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIA 284
KA DTT GD FN + G L + ++ K A ++V GA++++ E++
Sbjct: 243 KATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTRFGAQTSIPTRAEVEAFL 302
Query: 285 QE 286
E
Sbjct: 303 AE 304
>pir||T20529 hypothetical protein F07A11.5 - Caenorhabditis elegans
>gi|3875535|emb|CAA91318.1| (Z66511) contains similarity
to Pfam domain: PF00294 (pfkB family carbohydrate
kinase), Score=164.6, E-value=3.4e-51, N=1~cDNA EST
yk71c2.5 comes from this gene~cDNA EST yk71c2.3 comes
from this gene~cDNA EST yk280h9.3 comes from this
gene~cDNA EST yk2>
Length = 343
Score = 94.4 bits (231), Expect = 1e-18
Identities = 84/301 (27%), Positives = 137/301 (44%), Gaps = 24/301 (7%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
++ G++ D+V + FP E V G GG N A A+LG+ V IG VG
Sbjct: 37 IVVFGSIVQDLVSYTDSFPRPGESVRGHNFKLGSGGKGANQAVAAARLGINVSMIGMVGE 96
Query: 65 DDFGRLHLEFFREIGVDTSGI---KVVNDATGIAVTMVKGEDKRIVKYPGAN-----RWK 116
D FG +++ GVDTS + K + AT +T+ K + IV GAN
Sbjct: 97 DMFGDSNIKDLSSNGVDTSCVGRTKKTHTATA-TITVNKEGENNIVVTLGANLEMSPEIA 155
Query: 117 EVNTEYLKRARHLHLSSNPIEL-IREAVEKAKELGLTVSFD--PGEMEVPRDVEKELDIL 173
+ N+ + ++ + E R A E A+ G+T + PG+ + + + + +DI+
Sbjct: 156 DANSSKIAGSKMVICQGEIDEKGNRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVDII 215
Query: 174 MMNEDEFKAKYG-SLDRIKDVK----------ARIAIATLNGGGALVRDE-KGEVHEVRG 221
NE+E + G + + +KD + + AI TL G G L+ + +V
Sbjct: 216 CTNENEAEFITGIAQNNVKDAEKAARAMLKMGPQHAIITLGGKGVLLASKGVDDVEHTAV 275
Query: 222 LSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIK 281
+ A+DTTG GD F ++G + S + LA L+V G +S+ LDEI+
Sbjct: 276 IKVDAVDTTGAGDCFCGSLAAHLVAGHPISASIRSAANLAALSVTRHGTQSSYWKLDEIR 335
Query: 282 K 282
+
Sbjct: 336 Q 336
>sp|P42414|IOLC_BACSU IOLC PROTEIN >gi|7475652|pir||C69645 myo-inositol catabolism iolC -
Bacillus subtilis >gi|709983|dbj|BAA03292.1| (D14399)
hypothetical protein [Bacillus subtilis]
>gi|2636520|emb|CAB16010.1| (Z99124) alternate gene
name: yxdC~myo-inositol catabolism [Bacillus subtilis]
Length = 325
Score = 92.8 bits (227), Expect = 4e-18
Identities = 83/316 (26%), Positives = 146/316 (45%), Gaps = 37/316 (11%)
Query: 3 FDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAV 62
FD++ +G D+ + P +K V GGS N A AKLGLK GFIG +
Sbjct: 11 FDIVAIGRACIDLNAVEYNRPMEETMTFSKYV----GGSPANIAIGSAKLGLKAGFIGKI 66
Query: 63 GNDDFGRLHLEFFREIGVDTSGIKVVNDA--TGIAVT-MVKGEDKRIVKYPG--ANRW-- 115
+D GR + R+ GVDT+ + V D G+A T ++ E+ I+ Y A+ +
Sbjct: 67 PDDQHGRFIESYMRKTGVDTTQMIVDQDGHKAGLAFTEILSPEECSILMYRDDVADLYLE 126
Query: 116 -KEVNTEYLKRARHLHLSSNPI------ELIREAVEKAKELGLTVSFD----PGEMEVPR 164
EV+ +Y+ A+ L +S + E + +AV+ AK+ + V F+ P +
Sbjct: 127 PSEVSEDYIANAKMLLVSGTALAKSPSREAVLKAVQYAKKHQVKVVFELDYRPYTWQSSD 186
Query: 165 D-------VEKELDILMMNEDEFK--------AKYGSLDRIKDVKARIAIATLNGGGALV 209
+ V ++ DI++ DEF + S++ + A + + G+
Sbjct: 187 ETAVYYSLVAEQSDIVIGTRDEFDVMENRTGGSNEESVNHLFGHSADLVVIKHGVEGSYA 246
Query: 210 RDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVG 269
+ GEV + K + T G GD++ + F+YG +SG D+ + K G A + V +
Sbjct: 247 YSKSGEVFRAQAYKTKVLKTFGAGDSYASAFIYGLVSGKDIETALKYGSASASIVVSKHS 306
Query: 270 ARSAVRPLDEIKKIAQ 285
+ A+ +EI+++ +
Sbjct: 307 SSEAMPTAEEIEQLIE 322
>sp|O60116|RBSK_SCHPO PUTATIVE RIBOKINASE >gi|7493292|pir||T39594 ribokinase - fission
yeast (Schizosaccharomyces pombe)
>gi|3133096|emb|CAA19022.1| (AL023554) ribokinase; pfkB
family carbohydrate kinase [Schizosaccharomyces pombe]
Length = 318
Score = 92.8 bits (227), Expect = 4e-18
Identities = 83/308 (26%), Positives = 139/308 (44%), Gaps = 33/308 (10%)
Query: 4 DVICMGNLNYDIVFLMEKFPGIHEKVNAK--GVFTGLGGSAGNTATWLAKLG----LKVG 57
+++ +G++N D+V + P E ++ + G TG GG N A +A+L KV
Sbjct: 3 NIVVLGSMNTDLVMRTKICPSGGETIHGEPDGFSTGNGGKGANQAVAVARLSNPADTKVS 62
Query: 58 FIGAVGNDDFGRLHLEFFREIGVDTSGIKVV-NDATGIAVTMVKGE-DKRIVKYPGANRW 115
+G VG+D FG L ++ GV+ +K + N +TG+A+ +V+ + RI+ GAN
Sbjct: 63 MLGCVGDDAFGVEMLSGLKKDGVNVDNVKKIENKSTGVAMIIVEETGENRILLSEGANG- 121
Query: 116 KEVNTEYLKRARHLHLSSN--------PIELIREAVEKAKELGLTVSFDPGE-MEVPRDV 166
V+T ++K + N P+E + A++ A + G+ V +P + + D+
Sbjct: 122 -NVDTAFVKAMEQRISTCNLLIMQLEIPLEAVEIALQIAHKHGVDVLMNPAPAIPLSHDM 180
Query: 167 EKELDILMMNEDEFKAKYGSLDR---IKDVKA-----------RIAIATLNGGGALVRDE 212
L+ NE E D +++V A + I TL GA +
Sbjct: 181 ISYCAYLVPNEHEAAILLNQADSPATLENVDAYASKLLSFGVRKAVIITLGSQGAYYKSA 240
Query: 213 KGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARS 272
GE V KA+DTT GD F F G + +S + + +TVQ GA S
Sbjct: 241 NGESALVSACKVKAVDTTAAGDTFIGAFSNSIAHGQPLKDSLEFAAKCSAITVQRKGAAS 300
Query: 273 AVRPLDEI 280
++ L E+
Sbjct: 301 SIPSLLEV 308
>dbj|BAB06038.1| (AP001515) myo-inositol catabolism [Bacillus halodurans]
Length = 331
Score = 92.4 bits (226), Expect = 6e-18
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 38/318 (11%)
Query: 3 FDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAV 62
FD+I +G D+ + P +K V GGS N +KLGLK GFIG +
Sbjct: 11 FDLIAIGRACIDLNAVEYNRPMEETMTFSKYV----GGSPANIVIGSSKLGLKAGFIGKI 66
Query: 63 GNDDFGRLHLEFFREIGVDTSGIKVVNDA--TGIAVTMVKG-EDKRIVKY--PGANRW-- 115
+D GR + R +GVDTS + V + TG+A T +K E+ I+ Y A+ +
Sbjct: 67 ADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLS 126
Query: 116 -KEVNTEYLKRARHLHLSSNPI------ELIREAVEKAKELGLTVSFD----PGEMEVPR 164
+EVN Y++R++ L +S + E + +A+ AK + V F+ P E P
Sbjct: 127 PEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPE 186
Query: 165 D-------VEKELDILMMNEDEF-----KAKYGSLDR----IKDVKARIAIATLNGGGAL 208
+ V ++ DI++ +EF + + G D + + + G+
Sbjct: 187 ETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSF 246
Query: 209 VRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEV 268
+ GE + K + T G GD++ + FLY +SG + + K G A + V +
Sbjct: 247 AYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIVVSKH 306
Query: 269 GARSAVRPLDEIKKIAQE 286
+ A+ ++EI+ + ++
Sbjct: 307 SSSDAMPSVEEIEALIEK 324
>sp|Q57849|Y406_METJA HYPOTHETICAL SUGAR KINASE MJ0406 >gi|2129241|pir||F64350 ribokinase
(EC 2.7.1.15) - Methanococcus jannaschii
>gi|1592288|gb|AAB98396.1| (U67493) ribokinase (rbsK)
[Methanococcus jannaschii]
Length = 302
Score = 91.7 bits (224), Expect = 9e-18
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 18/290 (6%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
+ C+G+ D +F +EKFP + + GG+A NTA + KLG+ + VG
Sbjct: 8 ITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGY 67
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKY---PGANRWKEVNTE 121
D + + + + ++ S + + + +D + + A +KE+N
Sbjct: 68 DFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPP 127
Query: 122 YLKRARHLHLSSNPIELIREAVEKAKELGLTVSFDPGE------MEVPRDVEKELDILMM 175
+H+++ E + +KA L VSFDPG+ E+ ++ + + L M
Sbjct: 128 NF-NTEIVHIATGDPEFNLKCAKKAYGNNL-VSFDPGQDLPQYSKEMLLEIIEHTNFLFM 185
Query: 176 NEDEFKAKYGSL-----DRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTT 230
N+ EF+ L D ++ V A I G +D+K E+ ++ + K ID T
Sbjct: 186 NKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTKDKKIEIPCIK--AGKVIDPT 243
Query: 231 GGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEI 280
G GD++ AGFL ++ G+D+ +G A V+ G ++ + D++
Sbjct: 244 GAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKV 293
>pir||E72311 ribokinase - Thermotoga maritima (strain MSB8)
>gi|4981498|gb|AAD36039.1|AE001759_3 (AE001759)
ribokinase [Thermotoga maritima]
Length = 299
Score = 90.5 bits (221), Expect = 2e-17
Identities = 86/302 (28%), Positives = 138/302 (45%), Gaps = 32/302 (10%)
Query: 8 MGNLNYDIVFLMEKF--PGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLK-VGFIGAVGN 64
+G+ N DIV ++ F PG +K VF G G N A +AK+G K F+ +GN
Sbjct: 8 VGSSNIDIVLKVDHFTKPGETQKAIEMNVFPG--GKGANQAVTVAKIGEKGCRFVTCIGN 65
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMV-KGEDKRIVKYPGANRWKEVNTEYL 123
DD+ L +E + ++G+ +G V+ TG A V K RI+ +PGAN E+ E +
Sbjct: 66 DDYSDLLIENYEKLGI--TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANA--ELKKELI 121
Query: 124 KRARHLHLSSNPIELIREAV------EKAKELGLTVSFDPGEME-VPRDVEKELDILMMN 176
LS + I L++ + E AK V FDP + + ++ + LD L N
Sbjct: 122 DWNT---LSESDILLLQNEIPFETTLECAKRFNGIVIFDPAPAQGINEEIFQYLDYLTPN 178
Query: 177 EDEFKAK----YGSL-------DRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAK 225
E E +A +G ++ ++ + I L G L+ + K E K
Sbjct: 179 EKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVN-KNEKKHFPTFKVK 237
Query: 226 AIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQ 285
A+DTT GD FN F G + + G A ++V +GA+S++ +E++ +
Sbjct: 238 AVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFLK 297
Query: 286 EL 287
L
Sbjct: 298 NL 299
>emb|CAA04719.1| (AJ001389) RBSK [Rhizobium etli]
Length = 300
Score = 88.2 bits (215), Expect = 1e-16
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 24/296 (8%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
+ G++N D++ ++ P E V T GG N A + G V GAVG
Sbjct: 2 ITVFGSINMDLIATTDRLPKPGETVAGNSFATAAGGKGANQALAARRAGRYVHMAGAVGK 61
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGE-DKRIVKYPGANRW-----KEV 118
D F L + G D S +K V+ TG A+ +V G+ + I PGAN E
Sbjct: 62 DGFAADALALLDDAGTDLSLVKHVDGPTGTALILVGGDGENMIAVVPGANGLVTAADAET 121
Query: 119 NTEYLKRARHLHLSSN-PIELIREAVEKAKELGLT--VSFDPGEMEVPRDVEKELDILMM 175
+ L L P++ + A+ +A+ G+T ++ P + PR + + DI++
Sbjct: 122 AVGKMSEGDILMLQLEVPVDAVERALSEARVRGVTSILNLAPLTPDAPR-LGRLADIVIA 180
Query: 176 NEDEF-----------KAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSA 224
NE EF +A+ +L R+ + I TL GG ++ G + +GL
Sbjct: 181 NETEFERLAGQDGMDAEAREAALHRLHQETGQTLIVTL-GGDGVIAIRNGVISRAQGLKI 239
Query: 225 KAIDTTGGGDAFNAGFLYGFLSGWDVVNSA-KLGMLLAYLTVQEVGARSAVRPLDE 279
+ +DT G GD F F G + SA + + L + GA+ ++ PL +
Sbjct: 240 EPVDTVGAGDTFCGYFTASLDEGLRIFASALRRAAVAGSLACLKAGAQPSI-PLSQ 294
>gb|AAD50017.1|AC007651_12 (AC007651) Similar to ribokinase [Arabidopsis thaliana]
Length = 378
Score = 86.2 bits (210), Expect = 4e-16
Identities = 85/315 (26%), Positives = 140/315 (43%), Gaps = 34/315 (10%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
++ +G+ N DI +E+ P E ++AK T GG N A AKL F+G +G
Sbjct: 70 LVVVGSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAACGAKLMYPTYFVGRLGE 129
Query: 65 DDFGRLHLEFFREIGVDTSGI------KVVNDATGIAVTMVKGEDKR-IVKYPGAN--RW 115
D G+L E +G D G+ V N+ TG AV M++ + + I+ GAN W
Sbjct: 130 DAHGKLIAE---ALGDDGCGVHLDYVRSVNNEPTGHAVVMLQSDGQNSIIIVGGANMKAW 186
Query: 116 KEV----NTEYLKRARHLHLSSNPIELIREAVEKA-KELGLTVSFDPGEME--VPRDVEK 168
E+ + E ++ A + L + I V KA K+ G+ V D G M+ +P ++
Sbjct: 187 PEIMSDDDLEIVRNAGIVLLQREIPDSINIQVAKAVKKAGVPVILDVGGMDTPIPNELLD 246
Query: 169 ELDILMMNEDEFKAKYG----SLDRIKDVKAR--------IAIATLNGGGALVRDEKGEV 216
+DIL NE E G + ++I A+ + + + G AL + +
Sbjct: 247 SIDILSPNETELSRLTGMPTETFEQISQAVAKCHKLGVKQVLVKLGSKGSALFIQGEKPI 306
Query: 217 HEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRP 276
+ +A+ +DTTG GD F A F + G + A L VQ + A+
Sbjct: 307 QQSIIPAAQVVDTTGAGDTFTAAFAVAMVEGKSHEECLRFAAAAASLCVQ---VKGAIPS 363
Query: 277 LDEIKKIAQELKLNL 291
+ + K + + LK ++
Sbjct: 364 MPDRKSVLKLLKFSI 378
>pir||T07588 fructokinase (EC 2.7.1.4) 1 - tomato >gi|2102691|gb|AAB57733.1|
(U64817) fructokinase [Lycopersicon esculentum]
Length = 347
Score = 85.4 bits (208), Expect = 7e-16
Identities = 78/275 (28%), Positives = 124/275 (44%), Gaps = 48/275 (17%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+C G + D + G+ A GG+ N A ++KLG FIG VG+
Sbjct: 28 VVCFGEMLIDFI---PTVAGV-SLAEAPAFEKAPGGAPANVAVCISKLGGSSAFIGKVGD 83
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVKGEDKR---IVKYPGAN---RWKE 117
D+FGR+ + ++ VD SG++ +DA T +A + E +R + P A+ R E
Sbjct: 84 DEFGRMLADILKQNNVDNSGMRFDHDARTALAFITLTAEGEREFVFFRNPSADMLLRESE 143
Query: 118 VNTEYLKRARHLHLSSNPIELIRE--------AVEKAKELGLTVSFDPGEMEVP------ 163
++ + +K+A H S I LI E A++ AK G +S+DP + +P
Sbjct: 144 LDVDLIKKATIFHYGS--ISLIDEPCRSTHLAAMDIAKRSGSILSYDP-NLRLPLWPSED 200
Query: 164 ------RDVEKELDILMMNEDEFKAKYGS---------LDRIKDVKARIAIATLNGGGA- 207
V DI+ ++EDE G+ L R+ ++ + T G
Sbjct: 201 AARSGIMSVWNLADIIKISEDEISFLTGADDPNDDEVVLKRLFHPNLKLLLVTEGSAGCR 260
Query: 208 -LVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFL 241
++ KG V+ ++ KA+DTTG GDAF G L
Sbjct: 261 YYTKEFKGRVNSIK---VKAVDTTGAGDAFTGGVL 292
>dbj|BAB11252.1| (AB010074) fructokinase 1 [Arabidopsis thaliana]
Length = 343
Score = 85.4 bits (208), Expect = 7e-16
Identities = 88/324 (27%), Positives = 144/324 (44%), Gaps = 55/324 (16%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+C G + D V + G A GG+ N A +++LG FIG VG+
Sbjct: 24 VVCFGEMLIDFVPTV----GGVSLAEAPAFKKAPGGAPANVAVGVSRLGGSSAFIGKVGD 79
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVKGEDKR---IVKYPGANRW---KE 117
D+FGR+ + R VD SG++ ++A T +A ++G+ +R ++P A+ E
Sbjct: 80 DEFGRMLADILRLNNVDNSGMRFDHNARTALAFVTLRGDGEREFLFFRHPSADMLLLESE 139
Query: 118 VNTEYLKRARHLHLSSNPIELIRE--------AVEKAKELGLTVSFDPGEMEVP-----R 164
++ +++A+ H S I LI E A++ AK G +S+DP + +P
Sbjct: 140 LDKNLIQKAKIFHYGS--ISLIEEPCRSTQLVAMKIAKAAGSLLSYDP-NLRLPLWPSEE 196
Query: 165 DVEKEL-------DILMMNEDEFKAKYGSLDRIKD-----------VKARIAIATLNGGG 206
KE+ D++ ++EDE G D D +K + NG
Sbjct: 197 AARKEIMSIWNLADVIKISEDEITFLTGGDDPYDDDVVLQKLFHPNLKLLVVSEGPNGCR 256
Query: 207 ALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKL---GMLLA-- 261
++ KG V G+ K +DTTG GDAF +G L S ++ K +L A
Sbjct: 257 YYTQEFKG---RVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANA 313
Query: 262 --YLTVQEVGARSAVRPLDEIKKI 283
+TV E GA A+ +D ++ +
Sbjct: 314 CGAITVTERGAIPAMPSMDAVQDL 337
>dbj|BAB07443.1| (AP001519) 2-keto-3-deoxygluconate kinase [Bacillus halodurans]
Length = 317
Score = 85.0 bits (207), Expect = 9e-16
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 37 GLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVNDA-TGIA 95
G+GG+ N A +AKLG VG++ VGND+ G+ + R GVDTS + + + A TG+
Sbjct: 30 GVGGAESNVAIGVAKLGHSVGWVSKVGNDELGKYVISAIRGEGVDTSQVVLDDGAPTGLY 89
Query: 96 VTMVKGEDKRIVKY----PGANRW--KEVNTEYLKRARHLH-------LSSNPIELIREA 142
+ +D V Y A+R +++N Y+K+A+ +H LS + EL
Sbjct: 90 LKEKLRDDFNRVYYYRAGSAASRLGVEDINWAYMKQAKIIHITGITPLLSDSCYELCHAV 149
Query: 143 VEKAKELGLTVSFDPG-----EMEVPRDVEKEL------DILMMNEDEFKAKYGSLDRIK 191
++ AKE G+ SFDP VP E+ L D++M DE + + D +
Sbjct: 150 LDFAKENGIFASFDPNLRMKLLANVPDGKERLLALASKADLVMPGRDEAAFLFDT-DELA 208
Query: 192 DVKARI------AIATLNGG-GALVRDEKGEVHEVRGLSA-KAIDTTGGGDAFNAGFLYG 243
+ +R+ ++ +G GA +E E V K +D G GD F AG L
Sbjct: 209 QMFSRLLTGRTTSVVIKDGAKGAHFMEEGKEPQFVPSCPVDKVVDPVGAGDGFAAGVLAS 268
Query: 244 FLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQ 285
L G + + +G + L V G + ++++ +Q
Sbjct: 269 LLEGKSMEEAVSVGTQIGALVVMAKGDMEGLPEREQLEAFSQ 310
>gb|AAF35840.1|AF205034_3 (AF205034) ScrK [Clostridium acetobutylicum]
Length = 316
Score = 82.3 bits (200), Expect = 6e-15
Identities = 76/322 (23%), Positives = 141/322 (43%), Gaps = 54/322 (16%)
Query: 4 DVICMGNLNYDIVF-----LMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGF 58
+V+C+G L D + + K +K GG+ N ++KLG F
Sbjct: 3 NVLCIGELLIDFICSDIDTTLSKGENFKKKA---------GGAPANVTAAISKLGGSASF 53
Query: 59 IGAVGNDDFGRLHLEFFREIGVDTSGIKVVND-ATGIAVTMVKGEDKRIVKY----PGAN 113
+G VGND FG E E+ VDTS + + N+ +T +A ++ +R + G
Sbjct: 54 LGKVGNDPFGHFLKETLDEVKVDTSMLIMDNNSSTTLAFVSLQANGERDFVFNRGADGLL 113
Query: 114 RWKEVNTEYLKRARHLH-------LSSNPIELIREAVEKAKELGLTVSFDPGEME----- 161
R+ E+N + + + +H L + + +E+AK+ G+ +SFDP +
Sbjct: 114 RYDEINLDKVYSNKIIHFGSATALLGGEMTDTYLKIMEEAKKRGIIISFDPNYRDNLWEN 173
Query: 162 -------VPRDVEKELDILMMNEDEFKAKYGSLDRIKDVKA-----RIAIATLNGGGALV 209
+ R + D + ++++E K G + VK ++ TL G ++
Sbjct: 174 RTEEFIAISRKCIELADFVKLSDEELKIISGEKNIKNGVKLLASNNKVIAVTLGKEGTMI 233
Query: 210 RDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGF---LSGWDVVN-------SAKLGML 259
+ + EV + + K+ID+TG GDAF FLY L D+++ + +
Sbjct: 234 SNGE-EVEIIESIKIKSIDSTGAGDAFVGAFLYKLSEALEARDILSDFNKIKENVRFANK 292
Query: 260 LAYLTVQEVGARSAVRPLDEIK 281
+ + ++GA S++ L E++
Sbjct: 293 VGAIVCTKLGAISSLPSLSEVE 314
>sp|P05054|RBSK_ECOLI RIBOKINASE >gi|66667|pir||KIECRB ribokinase (EC 2.7.1.15)
[validated] - Escherichia coli >gi|5822394|pdb|1RK2|B
Chain B, E. Coli Ribokinase Complexed With Ribose And
Adp, Solved In Space Group P212121 >gi|2981974|pdb|1RKD|
E. Coli Ribokinase Complexed With Ribose And Adp
>gi|5822395|pdb|1RK2|C Chain C, E. Coli Ribokinase
Complexed With Ribose And Adp, Solved In Space Group
P212121 >gi|5822393|pdb|1RK2|A Chain A, E. Coli
Ribokinase Complexed With Ribose And Adp, Solved In
Space Group P212121 >gi|5822396|pdb|1RK2|D Chain D, E.
Coli Ribokinase Complexed With Ribose And Adp, Solved In
Space Group P212121 >gi|6137732|pdb|1RKA|A Chain A, The
Apo Form Of E. Coli Ribokinase >gi|6137733|pdb|1RKS|A
Chain A, E. Coli Ribokinase In Complex With D-Ribose
>gi|147516|gb|AAA51476.1| (M13169) ribokinase
[Escherichia coli] >gi|290602|gb|AAA62105.1| (L10328)
ribokinase [Escherichia coli] >gi|1790193|gb|AAC76775.1|
(AE000452) ribokinase [Escherichia coli K12]
Length = 309
Score = 81.9 bits (199), Expect = 8e-15
Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 25/298 (8%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
++ +G++N D + ++ FP E V GG N A + G + FI G+
Sbjct: 7 LVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGD 66
Query: 65 DDFGRLHLEFFREIGVDTSGIKVV-NDATGIAVTMVKGEDKRIVK-YPGAN-----RWKE 117
D G + +D + + V+ ++TG+A+ V GE + ++ + GAN E
Sbjct: 67 DSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVE 126
Query: 118 VNTEYLKRARHLHLS-SNPIELIREAVEKAKELGLTVSFDPG-EMEVPRDVEKELDILMM 175
E + A L + +P+E + A + A + V+ +P E+P ++ +DI+
Sbjct: 127 AQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITP 186
Query: 176 NE-------------DEFKAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGL 222
NE DE AK + K + R + TL G GE V G
Sbjct: 187 NETEAEKLTGIRVENDEDAAKAAQVLHEKGI--RTVLITLGSRGVWA-SVNGEGQRVPGF 243
Query: 223 SAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEI 280
+A+DT GD FN + L + + + A + V GA+ +V +EI
Sbjct: 244 RVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEI 301
>sp|O59128|YE59_PYRHO HYPOTHETICAL SUGAR KINASE PH1459 >gi|7434227|pir||F71020 probable
fructokinase - Pyrococcus horikoshii
>gi|3257883|dbj|BAA30566.1| (AP000006) 310aa long
hypothetical fructokinase [Pyrococcus horikoshii]
Length = 310
Score = 81.5 bits (198), Expect = 1e-14
Identities = 80/280 (28%), Positives = 132/280 (46%), Gaps = 32/280 (11%)
Query: 39 GGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGI-KVVNDATGIAVT 97
GG+ N A +++LG+K I VGND FG +E + VDT GI K TGI
Sbjct: 37 GGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFV 96
Query: 98 MVKGEDKRIVKYPGANRW----KEVNTEYLKRARHLH-----LSSNPI-ELIREAVEKAK 147
+KG + Y + ++N + ++ A+ ++ L+ NP E + + ++K K
Sbjct: 97 QLKGASPSFLLYDDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK 156
Query: 148 ELGLTVSFDPG-EMEVPRDVEKEL-----------DILMMNEDEFKAKYGSLDRIKDVKA 195
L ++FD +++ R E+E+ DI+ +E+E Y ++ +
Sbjct: 157 GSSL-IAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEE--VLYLENQGVEVKGS 213
Query: 196 RIAIATLNGGGA-LVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGF--LSGWDVVN 252
+ TL G L+++E V +V + +DTTG GDAF A L G L G D++
Sbjct: 214 MLTAITLGPKGCRLIKNE--TVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLDLLK 271
Query: 253 SAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELKLNLP 292
K L+A L+ Q+ GA S R DE+ K + ++ P
Sbjct: 272 LGKFANLVAALSTQKRGAWSTPRK-DELLKYKEAREVLAP 310
>dbj|BAB16906.1| (AP002863) contains ESTs AU029689(EE1266),C91697(EE1266)~unknown
protein [Oryza sativa]
Length = 377
Score = 81.1 bits (197), Expect = 1e-14
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 30/295 (10%)
Query: 6 ICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWL-AKLGLKVGFIGAVGN 64
+C+ LN+ + + + + +++ + T GGS NT L A G+ G IGA G+
Sbjct: 67 VCIEELNHILAEVNAQILPCRDDLSS--IRTIAGGSVANTIRGLSAGFGISTGIIGACGD 124
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGANRWK----EVNT 120
D G L + GVD + ++ T A +V R ++ ++ K E
Sbjct: 125 DSQGVLFVSNMSFSGVDLTRLRTKKGHT--AQCLVDASGNRTMRPCLSSAVKLQANEFKK 182
Query: 121 EYLKRARHL--HLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKEL-------- 170
E K ++ L + +E I EA+ AK+ GL+VS D E+ RD +L
Sbjct: 183 EDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLLETGN 242
Query: 171 -DILMMNEDEFKAKYGSLDRIKDVKA--------RIAIATLNGGGALVRDEKGEVHEVRG 221
D+ NEDE + G +A + A+ TL G + + K V
Sbjct: 243 IDLCFANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAAT 302
Query: 222 LSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRP 276
+ A+D TG GD F +GFLYG + G + K+G V+ +G VRP
Sbjct: 303 GESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGE--VRP 355
>pir||T01971 fructokinase (EC 2.7.1.4) - Arabidopsis thaliana
>gi|3695403|gb|AAC62803.1| (AF096373) contains
similarity to the pfkB family of carbohydrate kinases
(Pfam: PF00294, E=1.6e-75) [Arabidopsis thaliana]
>gi|4538955|emb|CAB39779.1| (AL049488) fructokinase-like
protein [Arabidopsis thaliana]
>gi|7267722|emb|CAB78149.1| (AL161516) fructokinase-like
protein [Arabidopsis thaliana]
Length = 324
Score = 80.4 bits (195), Expect = 2e-14
Identities = 71/242 (29%), Positives = 114/242 (46%), Gaps = 36/242 (14%)
Query: 33 GVFTGLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKV-VNDA 91
G GG+ N A + KLG K FIG G+D+FG + + ++ GV++ G+ N
Sbjct: 31 GFLKAPGGAPANVACAITKLGGKSAFIGKFGDDEFGHMLVNILKKNGVNSEGVCFDTNAR 90
Query: 92 TGIA-VTMVKGEDKRIVKY--PGAN---RWKEVNTEYLKRARHLHLSSNPIELIRE---- 141
T +A VT+ K ++ + Y P A+ + E+N + +K+A+ H S I LI E
Sbjct: 91 TALAFVTLKKDGEREFMFYRNPSADMLLKESELNKDLIKKAKIFHYGS--ISLISEPCRT 148
Query: 142 ----AVEKAKELGLTVSFDP-----------GEMEVPRDVEKELDILMMNEDEFKAKYGS 186
A++ AK+ G+ +S+DP +E + + E DI+ +++DE
Sbjct: 149 AHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRG 208
Query: 187 LDRIKDV-------KARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAG 239
DV K ++ I T G +K + V G + KA+DTTG GD+F
Sbjct: 209 DAEKDDVVLSLMHDKLKLLIVTDGEKGCRYYTKKFK-GRVPGYAVKAVDTTGAGDSFVGA 267
Query: 240 FL 241
FL
Sbjct: 268 FL 269
>gb|AAK42589.1| Ribokinase (rbsK-2) [Sulfolobus solfataricus]
Length = 283
Score = 80.0 bits (194), Expect = 3e-14
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 23/293 (7%)
Query: 6 ICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGND 65
+ +G N DI+ ++ P I + GG+A N A + KLG + VG
Sbjct: 4 LAVGRFNIDIIVKLDSIPPIDSSHMTDVLEIMPGGAATNYAVAVTKLGHSAKLLAKVGKS 63
Query: 66 DFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDK-RIVKYPGANRWKEVNTEYLK 124
+ R +E E+GV ++ +N+ + ++ + +V+ GA+ + E +K
Sbjct: 64 EVVRSLMEKVVELGVGLEYVEELNEKPSATLIFLRNDGTLSMVRRLGASIL--LTREDVK 121
Query: 125 RARHL----HLSS-NPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEK-ELDILMMNED 178
R L H +S +P ++R+ K VS+DPG +++E ++DIL +NE
Sbjct: 122 RRFGLFDVIHFASVSPNVVVRDPYAKL------VSYDPGPQA--KNIESVDVDILYVNEK 173
Query: 179 EFKAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNA 238
E++ + K+++AR + + GA + E E K +DTTG GD F+A
Sbjct: 174 EYE-----MIEDKNIRARFIVIKMGKKGAKIITETEECSVEPIQVEKIVDTTGAGDTFDA 228
Query: 239 GFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELKLNL 291
F + D+V S ++ + + L V +G S+ L+E+++ ++ K N+
Sbjct: 229 AFNVTYSEDKDIVKSLQVASVASGLKVSRIGGISS-PTLEEVREYLRKKKPNV 280
>gb|AAF79436.1|AC025808_18 (AC025808) F18O14.35 [Arabidopsis thaliana]
>gi|9795587|gb|AAF98405.1|AC024609_6 (AC024609) Unknown
protein [Arabidopsis thaliana]
Length = 355
Score = 78.0 bits (189), Expect = 1e-13
Identities = 68/256 (26%), Positives = 108/256 (41%), Gaps = 26/256 (10%)
Query: 39 GGSAGNTATWLAK-LGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVT 97
GGS NT L+ G+ G IGA G+D+ G+L + GV S ++ +T V
Sbjct: 74 GGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGSTAQCVC 133
Query: 98 MVKGEDKRIVKYPGANRWKEVNTEYLKRARH-------LHLSSNPIELIREAVEKAKELG 150
+V R ++ P + ++ + L + L + +++I+ A+ AK+ G
Sbjct: 134 LVDDSGNRTMR-PCLSSAVKIQADELSKEDFTGSKWLVLRYAVLNLQVIQAAIRFAKQEG 192
Query: 151 LTVSFDPGEMEVPRDVEKEL---------DILMMNEDEFKAKYGSLDRIKDVKA------ 195
L+VS D E+ R+ + EL D+ NEDE A
Sbjct: 193 LSVSLDLASFEMVRNSKSELRQLLESGNIDLCFANEDEAAELLRGEQEAGPEAALEFLGR 252
Query: 196 --RIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNS 253
R A+ TL G + + +K VH A D TG GD F +GFLYG + G +
Sbjct: 253 HCRWAVVTLGSKGCIAKHDKEVVHISAIGETVATDATGAGDLFASGFLYGLIKGLSLEEC 312
Query: 254 AKLGMLLAYLTVQEVG 269
K+G ++ +G
Sbjct: 313 CKVGSCSGGSVIRALG 328
>dbj|BAB05576.1| (AP001513) fructokinase [Bacillus halodurans]
Length = 319
Score = 77.3 bits (187), Expect = 2e-13
Identities = 86/324 (26%), Positives = 136/324 (41%), Gaps = 53/324 (16%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
M VIC+G D + M+ I++K GG+ N A LAKLG K F+G
Sbjct: 1 MNRGVICLGEALIDFI-PMDSTNEIYQK--------SPGGAPANVAVGLAKLGAKSTFVG 51
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVKGEDKRIVKY---PGANRW- 115
VG+D GR E + V+T + + TG + +R + P A+R+
Sbjct: 52 KVGDDLLGRFLKETLTKANVNTEHMLFSKEVRTGATFVTLAANGERSFDFYINPSADRFL 111
Query: 116 --KEVNTEYLKRARHLHLSSNPIELI--------REAVEKAKELGLTVSFDPG-EMEVPR 164
E+ + LH S I LI R AV AK+ GL +S+DP + +
Sbjct: 112 EKGEIAPTLFEEHGVLHFGS--ISLISEPARTATRHAVSLAKKNGLMISYDPNLRLNLWE 169
Query: 165 DVEK----------ELDILMMNEDEFKAKYG------SLDRIKDVKARIAIATLNGGGAL 208
D E+ E D+L ++E+E G LD++ + TL G++
Sbjct: 170 DEEQARLLITSMLGEADVLKISEEELAFITGEQTIEAGLDQLVAYNIPLVFVTLGEKGSI 229
Query: 209 VRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGF---------LSGWDVVNSAKLGML 259
V G ++ ++ + +DTTG GDAF + L+ LS +V A+ +
Sbjct: 230 V-SYNGIQRKIPAMAVQTVDTTGAGDAFVSAILFKLQEERKQVAELSIKEVEQMARFASV 288
Query: 260 LAYLTVQEVGARSAVRPLDEIKKI 283
L GA +A+ L+++ I
Sbjct: 289 SGGLAAATKGAMTALPTLEKVNDI 312
>pir||T46874 ribokinase homolog [imported] - Sulfolobus solfataricus
>gi|1706952|gb|AAB38089.1| (U52110) ribokinase
[Sulfolobus solfataricus]
Length = 287
Score = 76.9 bits (186), Expect = 3e-13
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 22/272 (8%)
Query: 6 ICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGND 65
+ +G +N DI+ + K P I E + GG+A N A + K G + + +G D
Sbjct: 6 LSVGRINIDIIAKINKIPDIDEFETTDTLEILPGGAAVNYAVAINKFGHSIKILSKIGKD 65
Query: 66 DFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDK-RIVKYPGANRWKEVNTEYLK 124
LE E+GV ++ N +A+ ++ +V+ G++ ++ E +K
Sbjct: 66 SLVSYVLERIAEMGVGLDYVEETNLPQSMALIFLRDNGSISMVRKLGSSIL--LDKEDIK 123
Query: 125 RARHL----HLSS-NPIELIREAVEKAKELGLTVSFDPG--EMEVPRDVEKELDILMMNE 177
+ L H +S +P ++R+ K +++DPG ++P + DI+ +NE
Sbjct: 124 KVFGLFDVIHFASISPDIVVRDPYAKL------ITYDPGPNSSKIPENFGNA-DIIYLNE 176
Query: 178 DEFKAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFN 237
E + +I+ +KAR+ + + GA V E E + +DTTG GD F+
Sbjct: 177 RE-----STKVKIESLKARLIVIKMGSKGAKVISENEECYCEPYKVQTVLDTTGAGDVFD 231
Query: 238 AGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVG 269
A F Y ++ G+ + ++ + + + L V +G
Sbjct: 232 AAFNYAYVQGYSIEDTLRFAVTASALKVMRIG 263
>gb|AAC98130.1| (AF098273) 2-keto-3-deoxy-gluconate kinase [Bacillus
stearothermophilus]
Length = 314
Score = 74.1 bits (179), Expect = 2e-12
Identities = 64/233 (27%), Positives = 103/233 (43%), Gaps = 31/233 (13%)
Query: 38 LGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIK-VVNDATGIAV 96
+GG N A LA+LG +VG+I VG+D+FG+ L F + GVD S +K + N +
Sbjct: 31 IGGRESNVAVGLARLGHRVGWISKVGSDEFGKAILSFLKGEGVDVSRVKWMGNTDRHLLK 90
Query: 97 TMVKGEDKRIVKY---PGANRW--KEVNTEYLKRARHLH-------LSSNPIELIREAVE 144
+ D R+ Y A+R +++ +Y+ A++LH LS N + + A+
Sbjct: 91 EQRRLNDTRVYYYRKGSAASRLTPADLDEKYIAEAKYLHITGITPALSENCRDTVFAAMA 150
Query: 145 KAKELGLTVSFDPG-----------EMEVPRDVEKELDILMMNEDEFKAKYGSL------ 187
A+ G+ + FDP EV + E D+++ E E +G
Sbjct: 151 MARRHGVKIVFDPNLRLKLWNEADRAKEVMLRMAAESDVVLPGEAEASFLFGKHSVEEWG 210
Query: 188 DRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGF 240
R+ D+ A + + L GA + V+G K D G GD F G+
Sbjct: 211 SRLLDMGASLVVIKLGANGAHYFTNAHHEY-VQGFLLKGYDPVGAGDGFVEGY 262
>pir||E75385 carbohydrate kinase, PfkB family - Deinococcus radiodurans (strain
R1) >gi|6459287|gb|AAF11090.1|AE001996_5 (AE001996)
carbohydrate kinase, PfkB family [Deinococcus
radiodurans]
Length = 311
Score = 74.1 bits (179), Expect = 2e-12
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 28/311 (9%)
Query: 1 MRFDVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIG 60
M+F VI G++ D ++ +++ P ++V K GGS G + LA+LG V
Sbjct: 1 MKFYVI--GDVTVDHLYHLDRLPAPGKEVTPKRSTMQPGGSGGTISVTLARLGHTVTLAA 58
Query: 61 AVGNDDFGRLHLEFFREIGVDTSGIKVVND--ATGIAVTMVKGEDKRIVKYPGANRWKE- 117
VG+D F L + GV S I+ + + I V G + ++ ANR +
Sbjct: 59 RVGDDPFAEFALAEIKASGVSLSAIQKDPEHLTSTITVMQTSGGQRAMISDGAANRQLDP 118
Query: 118 --VNTEYLKRARHLHLSSNPI------ELIREAVEKA----KELGLTVSFDPGEME-VPR 164
+ + ++ A L +S+ + E ++A+E A K + + + G +E V
Sbjct: 119 AKLKKKDVESADALIISAYSLTEGPQREYAQKAIEIARGAKKPVPVFIDLGTGAVEKVGT 178
Query: 165 DVEKEL---DILMMNEDEFKAKYGS------LDRIKDVKA-RIAIATLNGGGALVRDEKG 214
+ E+ D L +N+ E A G+ L R+ + R+A+ G + E
Sbjct: 179 GLVAEVRGADYLTLNQHELLALTGTRSLSAGLARLAEAGVERVAVKVGKMGSVVWTPEDT 238
Query: 215 EVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAV 274
E+ + +DTTG GD F A F + LSG + +A++ L VGA+S
Sbjct: 239 ELVDAVLPEGTVVDTTGAGDTFTAAFAHAVLSGLPLTQAARVANAAGALAATAVGAQSKP 298
Query: 275 RPLDEIKKIAQ 285
+ +++++AQ
Sbjct: 299 ILVGDLERVAQ 309
>pir||A75599 ribokinase - Deinococcus radiodurans (strain R1)
>gi|6460552|gb|AAF12258.1|AE001862_84 (AE001862)
ribokinase [Deinococcus radiodurans]
Length = 300
Score = 74.1 bits (179), Expect = 2e-12
Identities = 71/286 (24%), Positives = 115/286 (39%), Gaps = 10/286 (3%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+ +G+ N D V + P E V + T GG N A A+ G V F GA+G
Sbjct: 12 VLVVGSANLDFVTRLSHLPAPGETVLGESYTTAPGGKGANQAVACARAGGAVAFCGALGT 71
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGAN-RWKEVNTEYL 123
D F L RE GV ++ +++ + + I GAN + L
Sbjct: 72 DPFAEPLLASLRESGVQDWTVRASTPTGAAFISVSEAGENCIAVASGANGTLRPEQLPPL 131
Query: 124 KRARHLHLSSN-PIELIREAVEKAKELGLTVSFDPGEME-VPRDVEKELDILMMNEDEFK 181
L L P+E ++ A + A+E G V + +P ++ + +D+L++NE E +
Sbjct: 132 TGVGWLVLQLEIPLETVQAAAQAAREAGAQVVLNAAPARTLPPELLRLVDVLIVNEGELR 191
Query: 182 AKYGSLDRIKDVK------ARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDA 235
G+ D V+ R + TL G L + E+ L DTTG GD
Sbjct: 192 TLIGATDLRAGVRQAQASGPRTVVVTLGERGCLAL-SGDDWTELPALPVPVRDTTGAGDT 250
Query: 236 FNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIK 281
F + G + + + + L GA+ A+ +EI+
Sbjct: 251 FVGVLVAALSRGEPFAAALRWAVAGSALACTREGAQPAMPGREEIQ 296
>gi|11545855 ribokinase [Homo sapiens] >gi|10799803|emb|CAC12877.1| (AJ404857)
ribokinase [Homo sapiens]
Length = 322
Score = 74.1 bits (179), Expect = 2e-12
Identities = 79/299 (26%), Positives = 125/299 (41%), Gaps = 36/299 (12%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+ +G+ D+V L + P E ++ F G GG N A+LG + VG
Sbjct: 18 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGK 77
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVND-ATGIAVTMVKGEDKR-IVKYPGANRWKEVNTEY 122
D FG ++E ++ + T D ATG A +V E + IV GAN +NTE
Sbjct: 78 DSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLL--LNTED 135
Query: 123 LKRARHL---------HLSSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVE--KELD 171
L+ A ++ L P + EA+ A+ G+ F+P D + D
Sbjct: 136 LRAAANVISRAKVMVCQLEITPATSL-EALTMARRSGVKTLFNPAPAIADLDPQFYTLSD 194
Query: 172 ILMMNEDEFKAKYG-SLDRIKDV----------KARIAIATLNGGGALVRDE-KGEVHEV 219
+ NE E + G ++ D ++ I TL G +V + + E +
Sbjct: 195 VFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHI 254
Query: 220 RGLSAKAIDTTGGGDAFNAGF-----LYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSA 273
KA+DTTG GD+F Y LS D++N + +A ++VQ G +S+
Sbjct: 255 PTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSN---FIAAVSVQAAGTQSS 310
>gb|AAG12908.1|AC020665_17 (AC020665) fructokinase, putative; 80047-82040 [Arabidopsis
thaliana] >gi|11054541|gb|AAG27840.1|AC074025_10
(AC074025) fructokinase, putative [Arabidopsis thaliana]
Length = 384
Score = 73.4 bits (177), Expect = 3e-12
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 45/273 (16%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+C G + D V +A GG+ N A +A+LG FIG VG
Sbjct: 66 VVCFGEMLIDFVPTTSGL----SLADAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGE 121
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVKGEDKR---IVKYPGAN---RWKE 117
D+FG + ++ V+ G++ A T +A + E +R + P A+ E
Sbjct: 122 DEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEGEREFMFYRNPSADMLLEESE 181
Query: 118 VNTEYLKRARHLHLSSNPIELIRE--------AVEKAKELGLTVSFDP-----------G 158
++ + +K+A+ H S I LI E A + AKE G+ +S+DP
Sbjct: 182 LDFDLIKKAKIFHYGS--ISLITEPCKSAHISAAKAAKEAGVILSYDPNLRLPLWPSADN 239
Query: 159 EMEVPRDVEKELDILMMNEDEFKAKYGSLDRIKD--------VKARIAIATLNGGGA--L 208
E + + DI+ ++E+E D D K ++ + T G
Sbjct: 240 AREEILSIWETADIIKISEEEIVFLTKGEDPYDDNVVRKLFHPKLKLLLVTEGPEGCRYY 299
Query: 209 VRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFL 241
+D G VH GL +DTTG GDAF AG L
Sbjct: 300 TKDFSGRVH---GLKVDVVDTTGAGDAFVAGIL 329
>gb|AAF80125.1|AC024174_7 (AC024174) Contains similarity to a fructokinase from Lycopersicon
esculentum gi|1915974 and is a member of the pfkB
carbohydrate kinase family PF|00294. [Arabidopsis
thaliana]
Length = 345
Score = 73.0 bits (176), Expect = 4e-12
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 33 GVFTGLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVNDA- 91
G GG+ N A +++LG + F+G +G+DDFG + R+ GVD GI A
Sbjct: 35 GFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGAR 94
Query: 92 TGIAVTMVKGEDKR---IVKYPGAN---RWKEVNTEYLKRARHLHLSSNPIELIRE---- 141
T +A ++ + +R + P A+ R E+N E ++ A+ H S I LI E
Sbjct: 95 TALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGS--ISLITEPCRS 152
Query: 142 ----AVEKAKELGLTVSFDPGEME----VPRDVEKELDILMMNEDEFKAKYGSLDRIKDV 193
A+E AKE G +S+DP E P + ++ + D K L+ + +
Sbjct: 153 AHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTEN 212
Query: 194 KA--------------RIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAG 239
K ++ + TL G +K V A+DTTG GD+F
Sbjct: 213 KTMDDKTAMSLWHPNLKLLLVTLGEKGCTYFTKKFH-GSVETFHVDAVDTTGAGDSFVGA 271
Query: 240 FLYGFLSGWDVV-NSAKLGMLLAY 262
L + V+ + A+L +L +
Sbjct: 272 LLQQIVDDQSVLEDEARLRKVLRF 295
>pir||G75112 fructokinase (EC 2.7.1.4) PAB0482 - Pyrococcus abyssi (strain
Orsay) >gi|5458127|emb|CAB49616.1| (AJ248285)
FRUCTOKINASE (EC 2.7.1.4) [Pyrococcus abyssi]
Length = 305
Score = 72.6 bits (175), Expect = 5e-12
Identities = 72/275 (26%), Positives = 121/275 (43%), Gaps = 33/275 (12%)
Query: 39 GGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGI-KVVNDATGIAVT 97
GG+ N A +A+LG + VG+D FG +E R V T GI K TGI
Sbjct: 35 GGAPANVAVGIARLGFDSCLVSKVGDDPFGEFLVESLRRENVKTDGIVKDEEKHTGIVFV 94
Query: 98 MVKGEDKRIVKYPGAN----RWKEVNTEYLKRARHLHLSSNPI------ELIREAVEKAK 147
+ G + Y G R +++N E + +R +H S + E + + +++ K
Sbjct: 95 QLTGVSPSFILYDGVAYFNLRREDINWELINSSRIVHFGSVILARSPSRETVLDVIKRVK 154
Query: 148 ELGLTVSFDPG-EMEV----PRDVEKELDILMMNEDEFKAKYGSLDRIKD----VKARIA 198
+ VSFD +++ D+ + ++ + D KA +D ++D V+ ++
Sbjct: 155 TI---VSFDVNLRLDLWKNRGEDMLRTIEEAIKLADIVKASEEEVDYLEDNGIEVEGKLI 211
Query: 199 IATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNS----- 253
A G + K +V G +DTTG GDAF A L G + ++ N
Sbjct: 212 TAITMGS----KGAKLNGIQVPGYKVNPVDTTGAGDAFTAALLVGIMKVREITNENLEKI 267
Query: 254 AKLGMLLAYLTVQEVGARSAVRPLDEIK-KIAQEL 287
K L+A L+ + GA S + + +K K A+E+
Sbjct: 268 GKFANLVAALSTLKRGAWSVPKVEELLKYKEAREI 302
>sp|P40713|SCRK_ECOLI FRUCTOKINASE >gi|1073355|pir||S52161 probable fructokinase (EC
2.7.1.4) - Escherichia coli >gi|608707|emb|CAA57218.1|
(X81461) D-fructokinase [Escherichia coli]
Length = 305
Score = 71.8 bits (173), Expect = 9e-12
Identities = 74/240 (30%), Positives = 105/240 (42%), Gaps = 36/240 (15%)
Query: 39 GGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVN-DATGIAVT 97
GG+ N A +A+LG GFIG VG+D FG L GVD + +K T +
Sbjct: 28 GGAPANVAVGIARLGGTSGFIGRVGDDPFGALMQRTLLTEGVDITYLKQDEWHRTSTVLV 87
Query: 98 MVKGEDKRIVKY---PGANRWKEVNTEYLKRARH---LHLSSNPIELIRE--------AV 143
+ + +R + P A+ + E T L RH LHL S I L E A+
Sbjct: 88 DLNDQGERSFTFMVRPSADLFLE--TTDLPCWRHGEWLHLCS--IALSAEPSRTSAFTAM 143
Query: 144 EKAKELGLTVSFDPGEME-----------VPRDVEKELDILMMNEDEFKAKYGSLDRIKD 192
+ G VSFDP E R + D++ ++E+E++ G +D
Sbjct: 144 TAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQLADVVKLSEEEWRLISGKTQNDRD 203
Query: 193 VKA---RIAIATL---NGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLS 246
+ A IA L G +V +G+VH G+S +D+TG GDAF AG L G S
Sbjct: 204 ICALAKEYEIAMLLVTKGAEGVVVCYRGQVHHFAGMSVNCVDSTGAGDAFVAGLLTGLSS 263
>gb|AAF80126.1|AC024174_8 (AC024174) Contains similarity to a fructokinase from Solanum
tuberosum gi|585973 and is a member of the pfkB
carbohydrate kinase family PF|00294. [Arabidopsis
thaliana]
Length = 329
Score = 71.8 bits (173), Expect = 9e-12
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 42/247 (17%)
Query: 31 AKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVND 90
+ G GG+ N A +++LG + F+G +G+D+FG + R+ VD GI
Sbjct: 34 SSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEFGHMLAGILRKNDVDDQGINFDKG 93
Query: 91 A-TGIAVTMVKGEDKR---IVKYPGAN---RWKEVNTEYLKRARHLHLSSNPIELIRE-- 141
A T +A ++ + +R + P A+ R E+N E ++ A+ H S I LI E
Sbjct: 94 ARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGS--ISLITEPC 151
Query: 142 ------AVEKAKELGLTVSFDPGEME----VPRDVEKEL-------DILMMNEDEFKAKY 184
A+E AKE G +S+DP E P + K++ DI+ +++ E +
Sbjct: 152 RSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQIMSIWDKADIIKVSDVELEFLT 211
Query: 185 GSLDRIKDVKA--------RIAIATL--NGGGALVRDEKGEVHEVRGLSAKAIDTTGGGD 234
G+ I D A ++ + TL NG +D G V A+DTTG GD
Sbjct: 212 GN-KTIDDETAMSLWHPNLKLLLVTLGENGCRYYTKDFHGSVET---FHVDAVDTTGAGD 267
Query: 235 AFNAGFL 241
+F L
Sbjct: 268 SFVGALL 274
>sp|P36945|RBSK_BACSU RIBOKINASE >gi|7427979|pir||D69690 ribokinase (EC 2.7.1.15) -
Bacillus subtilis >gi|1894761|emb|CAB07465.1| (Z92953)
ribokinase [Bacillus subtilis]
>gi|2636117|emb|CAB15609.1| (Z99122) ribokinase
[Bacillus subtilis]
Length = 293
Score = 70.2 bits (169), Expect = 3e-11
Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 13/291 (4%)
Query: 4 DVICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVG 63
++ +G+ + D+V +K P E V T GG N A A+LG +V +G VG
Sbjct: 3 NICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVG 62
Query: 64 NDDFGRLHLEFFREIGVDTSGIK-VVNDATGIAVTMVKGEDKRIVKYPGANRWKEVNTEY 122
+D +G L + GV T ++ V + +G A ++ D IV GAN ++ Y
Sbjct: 63 DDHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVLAEGDNSIVVVKGAN--DDITPAY 120
Query: 123 LKRARH--------LHLSSNPIELIREAVEKAKELGLTVSFDPGEME-VPRDVEKELDIL 173
A L P E + E + + + +P + ++ L
Sbjct: 121 ALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPARPLKQETIDHATYL 180
Query: 174 MMNEDEFKAKYGSLDRIKDVKARIAIATLNGGGALVRDEKGEVHE-VRGLSAKAIDTTGG 232
NE E + L + + A + G VR G + + +DTTG
Sbjct: 181 TPNEHEASILFPELTISEALALYPAKLFITEGKQGVRYSAGSKEVLIPSFPVEPVDTTGA 240
Query: 233 GDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKI 283
GD FNA F G D+ + + A L+V GA+ + +E++++
Sbjct: 241 GDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEEL 291
>pir||T49289 fructokinase-like protein - Arabidopsis thaliana
>gi|6996284|emb|CAB75445.1| (AL138659) fructokinase-like
protein [Arabidopsis thaliana]
Length = 326
Score = 69.9 bits (168), Expect = 3e-11
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 44/249 (17%)
Query: 30 NAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVN 89
+A G GG+ N A +++LG + F+G +G+D+FG + ++ GV GI
Sbjct: 32 DAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGDDEFGHMLAGILKQNGVSAEGINFDT 91
Query: 90 DA-TGIAVTMVKGEDKR---IVKYPGAN---RWKEVNTEYLKRARHLHLSSNPIELIRE- 141
A T +A ++ + +R + P A+ R E+N + ++ A+ H S I LI E
Sbjct: 92 GARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLDVIRSAKVFHYGS--ISLIVEP 149
Query: 142 -------AVEKAKELGLTVSFDPGEMEVP-----RDVEKEL-------DILMMNEDEFKA 182
A+E AKE G +S+DP + +P + +K++ +++ ++++E
Sbjct: 150 CRSAHLKAMEVAKEAGALLSYDP-NLRLPLWPSKEEAQKQILSIWDKAEVIKVSDEELMF 208
Query: 183 KYGSLDRIKDVKA--------RIAIATLNGGGA--LVRDEKGEVHEVRGLSAKAIDTTGG 232
GS D++ D A ++ + TL G + +G V A+DTTG
Sbjct: 209 LTGS-DKVDDETALSLWHSNLKLLLVTLGEKGCRYYTKSFRGSVDP---FHVDAVDTTGA 264
Query: 233 GDAFNAGFL 241
GD+F L
Sbjct: 265 GDSFVGALL 273
>gi|10383797 ribokinase; Rbk1p [Saccharomyces cerevisiae]
Length = 333
Score = 69.9 bits (168), Expect = 3e-11
Identities = 79/333 (23%), Positives = 137/333 (40%), Gaps = 55/333 (16%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLG-----LKVGFI 59
+ +G+LNYD+ ++ P E A T GG N A + KL V I
Sbjct: 3 ITVIGSLNYDLDTFTDRLPNAGETFRANHFETHAGGKGLNQAAAIGKLKNPSSRYSVRMI 62
Query: 60 GAVGNDDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVK---GEDKRIVKYPGAN-- 113
G VGND FG+ + + GVD + + TG A +++ G RI+ GAN
Sbjct: 63 GNVGNDTFGKQLKDTLSDCGVDITHVGTYEGINTGTATILIEEKAGGQNRILIVEGANSK 122
Query: 114 ------RWKEVNTEYLKRARHL---HLSSNPIELIREAVEKAKELGLTVSFDPGEME-VP 163
+ E+ E + ++ H +P+ +I+ A + ++P + +P
Sbjct: 123 TIYDPKQLCEIFPEGKEEEEYVVFQHEIPDPLSIIKWI--HANRPNFQIVYNPSPFKAMP 180
Query: 164 RDVEKELDILMMNE------------------------DEFKAKYGSL-----DRIKDVK 194
+ + +D+L++NE D+F +Y + +++ + K
Sbjct: 181 KKDWELVDLLVVNEIEGLQIVESVFDNELVEEIREKIKDDFLGEYRKICELLYEKLMNRK 240
Query: 195 AR-IAIATLNGGGALV-RDEKGEVHEVRGL-SAKAIDTTGGGDAFNAGFLYGFLSGWDVV 251
R I + TL G L E EV + + + +DTTG GD F G + G +
Sbjct: 241 KRGIVVMTLGSRGVLFCSHESPEVQFLPAIQNVSVVDTTGAGDTFLGGLVTQLYQGETLS 300
Query: 252 NSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIA 284
+ K L + LT+Q GA ++ +++K A
Sbjct: 301 TAIKFSTLASSLTIQRKGAAESMPLYKDVQKDA 333
>sp|P25332|RBSK_YEAST PROBABLE RIBOKINASE >gi|279503|pir||KIBYRB ribokinase (EC 2.7.1.15)
- yeast (Saccharomyces cerevisiae)
>gi|4492|emb|CAA40228.1| (X56909) ribokinase
[Saccharomyces cerevisiae] >gi|1907178|emb|CAA42303.1|
(X59720) YCR036w, len:333 [Saccharomyces cerevisiae]
Length = 333
Score = 69.1 bits (166), Expect = 6e-11
Identities = 79/333 (23%), Positives = 137/333 (40%), Gaps = 55/333 (16%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLG-----LKVGFI 59
+ +G+LNYD+ ++ P E A T GG N A + KL V I
Sbjct: 3 ITVIGSLNYDLDTFTDRLPNAGETFRANHFETHAGGKGLNQAAAIGKLKNPSSRYSVRMI 62
Query: 60 GAVGNDDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVK---GEDKRIVKYPGAN-- 113
G VGND FG+ + + GVD + + TG A +++ G RI+ GAN
Sbjct: 63 GNVGNDTFGKQLKDTLSDCGVDITHVGTYEGINTGTATILIEEKAGGQNRILIVEGANSK 122
Query: 114 ------RWKEVNTEYLKRARHL---HLSSNPIELIREAVEKAKELGLTVSFDPGEME-VP 163
+ E+ E + ++ H +P+ +I+ A + ++P + +P
Sbjct: 123 TIYDPKQLCEIFPEGKEEEEYVVFQHEIPDPLSIIKWI--HANRPNFQIVYNPSPFKTMP 180
Query: 164 RDVEKELDILMMNE------------------------DEFKAKYGSL-----DRIKDVK 194
+ + +D+L++NE D+F +Y + +++ + K
Sbjct: 181 KKDWELVDLLVVNEIEGLQIVESVFDNELVEEIREKIKDDFLGEYRKICELLYEKLMNRK 240
Query: 195 AR-IAIATLNGGGALV-RDEKGEVHEVRGL-SAKAIDTTGGGDAFNAGFLYGFLSGWDVV 251
R I + TL G L E EV + + + +DTTG GD F G + G +
Sbjct: 241 KRGIVVMTLGSRGVLFCSHESPEVQFLPAIQNVSVVDTTGAGDTFLGGLVTQLYQGETLS 300
Query: 252 NSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIA 284
+ K L + LT+Q GA ++ +++K A
Sbjct: 301 MAIKFSTLASSLTIQRKGAAESMPLYKDVQKDA 333
>pir||D64937 probable sugar kinase (EC 2.7.1.-) - Escherichia coli (strain
K-12) >gi|1742883|dbj|BAA15563.1| (D90820)
2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) (2-keto-3-
Deoxygluconokinase) (3-deoxy-2-oxo-d-gluconate kinase)
(Kdg kinase). [Escherichia coli]
>gi|1742891|dbj|BAA15570.1| (D90821)
2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) (2-keto-3-
Deoxygluconokinase) (3-deoxy-2-oxo-d-gluconate kinase)
(Kdg kinase). [Escherichia coli]
>gi|1788071|gb|AAC74842.1| (AE000272) putative kinase
[Escherichia coli K12]
Length = 322
Score = 69.1 bits (166), Expect = 6e-11
Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 43/317 (13%)
Query: 4 DVICMGNLNYDI--------VFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLK 55
DVIC+G DI +F ++ +P + + GG A N AT +++LG +
Sbjct: 12 DVICIGAAIVDIPLQPVSKNIFDVDSYP-------LERIAMTTGGDAINEATIISRLGHR 64
Query: 56 VGFIGAVGNDDFGRLHLEFFREIGVDTSGIKV-VNDATGIAVTMVKGEDKR-IVKYPGAN 113
+ +G D G+ L+ R+ +D +K V+ T I V +V + +R V +
Sbjct: 65 TALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGS 124
Query: 114 RWK----EVNTEYLKRARHLHLSS---NPI---ELIREAVEKAKELGLTVSFD---PGEM 160
WK +V+ +A+ L L+S +P+ + + E +AK + + D P
Sbjct: 125 LWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLN 184
Query: 161 EVPRDVEKEL---DILMMNEDEFKAKYG--SLDRIKDVKARIAIATL----NGGGALVR- 210
E D+ + L D L N E K G +LD I D + T+ G ++
Sbjct: 185 ETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKR 244
Query: 211 -DEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVG 269
D +V V G++A IDT G GD F +GF+ L G ++ A+ A ++V VG
Sbjct: 245 GDMTMKVPAVAGITA--IDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVG 302
Query: 270 ARSAVRPLDEIKKIAQE 286
A + V+ ++++ +E
Sbjct: 303 ATTGVKNRKLVEQLLEE 319
>gb|AAB51108.1| (U62329) fructokinase [Lycopersicon esculentum]
>gi|2102693|gb|AAB57734.1| (U64818) fructokinase
[Lycopersicon esculentum]
Length = 328
Score = 69.1 bits (166), Expect = 6e-11
Identities = 67/246 (27%), Positives = 111/246 (44%), Gaps = 40/246 (16%)
Query: 31 AKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVND 90
A G GG+ N A + +LG K F+G +G+D+FG + + GV GI
Sbjct: 34 APGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQAEGINFDKG 93
Query: 91 A-TGIAVTMVKGEDKR---IVKYPGANRW---KEVNTEYLKRARHLHLSSNPIELIRE-- 141
A T +A ++ + +R + P A+ E+N + ++ A+ H S I LI E
Sbjct: 94 ARTALAFVTLRADGEREFMFYRNPSADMLLTPAELNLDLIRSAKVFHYGS--ISLIVEPC 151
Query: 142 ------AVEKAKELGLTVSFDPGEMEVP-----RDVEKEL-------DILMMNEDEFKAK 183
A+E AKE G +S+DP + +P + +K++ D++ +++ E +
Sbjct: 152 RAAHMKAMEVAKEAGALLSYDP-NLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFL 210
Query: 184 YGSLDRIKDVKA--------RIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDA 235
GS ++I D A ++ + TL G +K V G K +DTTG GD+
Sbjct: 211 TGS-NKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKKFH-GTVGGFHVKTVDTTGAGDS 268
Query: 236 FNAGFL 241
F L
Sbjct: 269 FVGALL 274
>sp|P77493|YDJH_ECOLI HYPOTHETICAL SUGAR KINASE IN ANSA-GAPA INTERGENIC REGION
Length = 315
Score = 69.1 bits (166), Expect = 6e-11
Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 43/317 (13%)
Query: 4 DVICMGNLNYDI--------VFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLK 55
DVIC+G DI +F ++ +P + + GG A N AT +++LG +
Sbjct: 5 DVICIGAAIVDIPLQPVSKNIFDVDSYP-------LERIAMTTGGDAINEATIISRLGHR 57
Query: 56 VGFIGAVGNDDFGRLHLEFFREIGVDTSGIKV-VNDATGIAVTMVKGEDKR-IVKYPGAN 113
+ +G D G+ L+ R+ +D +K V+ T I V +V + +R V +
Sbjct: 58 TALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGS 117
Query: 114 RWK----EVNTEYLKRARHLHLSS---NPI---ELIREAVEKAKELGLTVSFD---PGEM 160
WK +V+ +A+ L L+S +P+ + + E +AK + + D P
Sbjct: 118 LWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLN 177
Query: 161 EVPRDVEKEL---DILMMNEDEFKAKYG--SLDRIKDVKARIAIATL----NGGGALVR- 210
E D+ + L D L N E K G +LD I D + T+ G ++
Sbjct: 178 ETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKR 237
Query: 211 -DEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQEVG 269
D +V V G++A IDT G GD F +GF+ L G ++ A+ A ++V VG
Sbjct: 238 GDMTMKVPAVAGITA--IDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVG 295
Query: 270 ARSAVRPLDEIKKIAQE 286
A + V+ ++++ +E
Sbjct: 296 ATTGVKNRKLVEQLLEE 312
>pir||A82433 fructokinase VCA0656 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9658072|gb|AAF96557.1| (AE004395)
fructokinase [Vibrio cholerae]
Length = 323
Score = 69.1 bits (166), Expect = 6e-11
Identities = 69/248 (27%), Positives = 108/248 (42%), Gaps = 33/248 (13%)
Query: 39 GGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKV--VNDATGIAV 96
GG+ N A +A+L + F G VGND FGR + + VD + V+ + + V
Sbjct: 44 GGAPANVAVAIARLCGRSAFFGRVGNDPFGRFMQQTLTDEQVDCQHLYFDPVHRTSTVVV 103
Query: 97 TMVKGEDKRI--VKYPGANRWKEVNT-EYLKRARHLHLSSNPIELIRE--------AVEK 145
+ + ++ + P A+++ +++ + LH+ S I L + A+ +
Sbjct: 104 DLDEHGERSFTFMVKPSADQFLQLSDIPSFQNGEWLHVCS--IALANQPSRSSTFAAIAQ 161
Query: 146 AKELGLTVSFDPGEMEVPRDVEKEL-----------DILMMNEDEFKAKYGS------LD 188
KE+G VSFDP E +EL D++ +E+E + G+ L
Sbjct: 162 MKEVGGYVSFDPNLREEVWSEPQELQATVMRAVGLADVVKFSEEELQFLTGTQSIEEGLQ 221
Query: 189 RIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGW 248
I D + + + TL GALV V G + K IDTTG GDAF G LY
Sbjct: 222 AIADFQIPLVVVTLGAKGALVVTPNSR-QIVSGKAVKPIDTTGAGDAFVGGLLYRLSVAQ 280
Query: 249 DVVNSAKL 256
D N A +
Sbjct: 281 DWHNQATI 288
>gb|AAK43293.1| Fructokinase [Sulfolobus solfataricus]
Length = 313
Score = 68.7 bits (165), Expect = 8e-11
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 38 LGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAV 96
+ GS N + + L I VGND+FG+ +E+ R G+DTS IKV N++ TGI
Sbjct: 32 VAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYF 91
Query: 97 TM------VKGEDKRIVKYPGANRW--KEVNTEYLKRARHLH-------LSSNPIELIRE 141
+K E K +R +++N Y++ +R +H +S N E + +
Sbjct: 92 IQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIK 151
Query: 142 AVEKAKELGLTVSFDP---GEMEVPRDV------EKELDILMMNEDEFKAKYGSLD---- 188
A E AK L + P +E ++ + ++++L+ + D+ K D
Sbjct: 152 AFELAKSRSLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTDPDEA 211
Query: 189 --RIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLS 246
+ K++ ++ + L GA+ + + + D TG GDA F+ +L
Sbjct: 212 YRKYKELGVKVLLYKLGSKGAIAYKDNVKAFK-DAYKVPVEDPTGAGDAMAGTFVSLYLQ 270
Query: 247 GWDVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIKKIAQELK 288
G D+ S G+ + L + G L++ ++ E K
Sbjct: 271 GKDIEYSLAHGIAASTLVITVRGDNELTPTLEDAERFLNEFK 312
>sp|P37829|SCRK_SOLTU FRUCTOKINASE >gi|626018|pir||S39997 fructokinase (EC 2.7.1.4) -
potato >gi|297015|emb|CAA78283.1| (Z12823) fructokinase
[Solanum tuberosum] >gi|1095321|prf||2108342A
fructokinase [Solanum tuberosum]
Length = 319
Score = 68.7 bits (165), Expect = 8e-11
Identities = 65/235 (27%), Positives = 104/235 (43%), Gaps = 28/235 (11%)
Query: 31 AKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGIKVVND 90
A G GG+ N A + +LG K F+G +G+D+FG + + GV GI
Sbjct: 35 APGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKG 94
Query: 91 A-TGIAVTMVKGEDKR---IVKYPGANRW---KEVNTEYLKRARHLHLSSNPIELIRE-- 141
A T +A ++ + +R + P A+ E+N + ++ A+ H S I LI E
Sbjct: 95 ARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLDLIRSAKVFHYGS--ISLIVEPC 152
Query: 142 ------AVEKAKELGLTVSFDPG-EMEVPRDVEKELDILMMNEDEFKAKYGSLDRIKDVK 194
A+E AKE G +S+DP + + + + +++ E + GS D+I D
Sbjct: 153 RSAHLKAMEVAKEAGALLSYDPNLRLPLWSSEAEARKAIKVSDVELEFLTGS-DKIDDES 211
Query: 195 A--------RIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFL 241
A ++ + TL G +K V G K +DTTG GD+F L
Sbjct: 212 AMSLWHPNLKLLLVTLGEKGCNYYTKKFH-GSVGGFHVKTVDTTGAGDSFVGALL 265
>sp|O34768|YDJE_BACSU HYPOTHETICAL SUGAR KINASE IN GUTA-COTA INTERGENIC REGION
>gi|7434222|pir||A69789 fructokinase homolog ydjE -
Bacillus subtilis >gi|2522009|dbj|BAA22760.1| (AB007638)
sugar transport protein [Bacillus subtilis]
>gi|2632930|emb|CAB12436.1| (Z99107) similar to
fructokinase [Bacillus subtilis]
Length = 320
Score = 68.7 bits (165), Expect = 8e-11
Identities = 86/317 (27%), Positives = 134/317 (42%), Gaps = 47/317 (14%)
Query: 5 VICMGNLNYDIVFLMEKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAVGN 64
V+C+G L D F + + E + GG+ N + +AKLG F G VG
Sbjct: 6 VVCIGELLIDF-FCTDVDVDLME---GRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGK 61
Query: 65 DDFGRLHLEFFREIGVDTSGIKVVNDA-TGIAVTMVKGEDKR-IVKYPGAN---RWKEVN 119
D FG + VDTS + + A T +A +K +R V GA+ ++++
Sbjct: 62 DPFGYFLKRTLDAVHVDTSMLVMDEKAPTTLAFVSLKQNGERDFVFNRGADALFTLEDID 121
Query: 120 TEYLKRARHLH------LSSNPI-ELIREAVEKAKELGLTVSFDPGEME----------- 161
E L A+ LH L S+P + AK+ G +SFDP E
Sbjct: 122 QEKLNEAKILHFGSATALLSDPFCSAYLRLMSIAKDNGQFISFDPNYREDLWRGRVSEFV 181
Query: 162 -VPRDVEKELDILMMNEDEFKAKYGSLDRIK------DVKARIAIATLNGGGALVRDEKG 214
V + D + ++++E + G D K ++ A I TL G L+ + K
Sbjct: 182 SVAKKAIAVSDFVKVSDEELEIISGVKDHEKGVAILHEIGANIVAVTLGKSGTLLSNGK- 240
Query: 215 EVHEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNS-----AKLGMLLAY------L 263
+ + + +ID+TG GDAF LY L+ D + S KL ++A+ L
Sbjct: 241 DREIIPSIPVTSIDSTGAGDAFVGAALYQ-LANTDQIQSVDADFVKLREIVAFANKVGAL 299
Query: 264 TVQEVGARSAVRPLDEI 280
++GA A+ LDEI
Sbjct: 300 VCTKIGAIDALPSLDEI 316
>pir||H72394 fructokinase - Thermotoga maritima (strain MSB8)
>gi|4980795|gb|AAD35384.1|AE001711_7 (AE001711)
fructokinase [Thermotoga maritima]
Length = 315
Score = 68.7 bits (165), Expect = 8e-11
Identities = 73/283 (25%), Positives = 120/283 (41%), Gaps = 48/283 (16%)
Query: 39 GGSAGNTATWLAKLGLKVGFIGAVGNDDFGRLHLEFFREIGVDTSGI-----------KV 87
GGS N A L +LG +V F+G +G D F LE ++ G+DT+ I V
Sbjct: 33 GGSPLNVAVALKRLGREVSFLGKLGGDQFSEFLLEVMKKEGIDTTHIIFDSSCKTTLAFV 92
Query: 88 VNDATG---IAVTMVKGEDKRIVKYPGANRWKEVNTEYLKRA-RHLHLSSNPIELIREAV 143
DA G K D + R +EVN + + + H+ S +E R A
Sbjct: 93 ARDAQGNPDFVFFREKPADTNL-------RPEEVNIDPAQFSFLHIGSYSLAVEPSRSAY 145
Query: 144 EKAKEL----GLTVSFDPGE-----------MEVPRDVEKELDILMMNEDEFKAKY---- 184
K E G VS+DP ++ ++ ++DI+ +++ + + +
Sbjct: 146 LKVMETFLEEGKPVSYDPNVRPSLIEDRNTFVKDFLEISSKVDIVKLSDKDLEYIFQEDL 205
Query: 185 -GSLDRIKDVKARIAIATLNGGGALVRDEKGEVHEVRGLSAKAIDTTGGGDAFNAGFLYG 243
++D+I + + T+ G LV+ KGE V K +D TG GD+F A ++
Sbjct: 206 ETAVDKIPIKENGLLFVTMGERGCLVK-FKGEKRMVPSFKVKPVDATGCGDSFTAAVIHK 264
Query: 244 FLSGW-----DVVNSAKLGMLLAYLTVQEVGARSAVRPLDEIK 281
+L D V K +A + + VG A+ LDE++
Sbjct: 265 YLEKTPETIEDAVEIGKFANAVAAIVITRVGGVDAMPVLDEVE 307
>pir||D75288 carbohydrate kinase, PfkB family - Deinococcus radiodurans (strain
R1) >gi|6460123|gb|AAF11859.1|AE002063_2 (AE002063)
carbohydrate kinase, PfkB family [Deinococcus
radiodurans]
Length = 383
Score = 68.7 bits (165), Expect = 8e-11
Identities = 80/292 (27%), Positives = 116/292 (39%), Gaps = 35/292 (11%)
Query: 5 VICMGNLNYDIVFLM--EKFPGIHEKVNAKGVFTGLGGSAGNTATWLAKLGLKVGFIGAV 62
V+ +G N D+ + E PG N GG A N A LA+LG+ + AV
Sbjct: 76 VVVVGGANMDLKARVRGEAVPGTS---NPGVTSQSPGGVARNVAENLARLGVSAALVSAV 132
Query: 63 GNDDFGRLHLEFFREIGVDTSGIKVVNDATGIAVTMVKGEDKRIVKYPGANRWKEVNTEY 122
G D G + L GVD SG+ V+ A + T V G ++ A E T
Sbjct: 133 GPDSLGDVLLRETEAAGVDVSGVLRVSGAATGSYTAVLGAGGELLLAVAAMDVMEHLTPA 192
Query: 123 LKRARHLHL---------SSNPIELIREAVEKAKELGLTVSFDPGEMEVPRDVEKELDI- 172
R L + P + + + A E G+ V ++P + VP+ +
Sbjct: 193 ALRGLRASLRGAAWVVADGNLPADTLPTLLALAAETGVRVVYEP--VSVPKAARLRPALA 250
Query: 173 -------LMMNEDEFKAKYGSLDRIKDVKARIAIATLNGGGALV----RDEKGEV----- 216
+ N E A G R A L+ GA + R E+G V
Sbjct: 251 AGHVPYAVTPNLAELAALVGREVADSPAAIREAALELHALGAELVWVRRGERGSVLSLPD 310
Query: 217 --HEVRGLSAKAIDTTGGGDAFNAGFLYGFLSGWDVVNSAKLGMLLAYLTVQ 266
HE+ L A +D TG GDA A FL G ++G +++A+ G A LTV+
Sbjct: 311 ESHELPALPAAVVDVTGAGDAMLAAFLAGLVAGLTPLHAAREGHAAAALTVE 362
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.400
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109837956
Number of Sequences: 2977
Number of extensions: 4716196
Number of successful extensions: 13280
Number of sequences better than 1.0e-10: 60
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 13192
Number of HSP's gapped (non-prelim): 60
length of query: 293
length of database: 189,106,746
effective HSP length: 55
effective length of query: 238
effective length of database: 156,189,961
effective search space: 37173210718
effective search space used: 37173210718
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)