BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0314 (PAB0314) DE:Hypothetical protein
(425 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75164 hypothetical protein PAB0314 - Pyrococcus abyssi (st... 867 0.0
pir||G71177 hypothetical protein PH1701 - Pyrococcus horikoshii ... 791 0.0
pir||F64485 hypothetical protein MJ1487 - Methanococcus jannasch... 291 1e-77
pir||A72408 conserved hypothetical protein - Thermotoga maritima... 248 8e-65
gb|AAB97826.1| (AF013216) unknown [Myxococcus xanthus] 237 2e-61
pir||H72516 hypothetical protein APE2109 - Aeropyrum pernix (str... 198 1e-49
emb|CAC11633.1| (AL445064) P-methyltransferase related protein [... 90 4e-17
pir||B69023 conserved hypothetical protein MTH1171 - Methanobact... 83 6e-15
pir||E72242 Mg-protoporphyrin IX monomethyl ester oxidative cycl... 75 1e-12
sp|Q58275|Y865_METJA HYPOTHETICAL PROTEIN MJ0865 >gi|2128548|pir... 71 3e-11
sp|Q9ZCE8|Y808_RICPR HYPOTHETICAL PROTEIN RP808 >gi|7445345|pir|... 70 5e-11
gi|11498846 conserved hypothetical protein [Archaeoglobus fulgid... 69 9e-11
>pir||D75164 hypothetical protein PAB0314 - Pyrococcus abyssi (strain Orsay)
>gi|5457905|emb|CAB49395.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 425
Score = 867 bits (2215), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MSVEVAVRITRRNHNAFVHLLAALESQGYDLSNVLVTKDINEIIKARPSVILYSFYSQEV 60
MSVEVAVRITRRNHNAFVHLLAALESQGYDLSNVLVTKDINEIIKARPSVILYSFYSQEV
Sbjct: 1 MSVEVAVRITRRNHNAFVHLLAALESQGYDLSNVLVTKDINEIIKARPSVILYSFYSQEV 60
Query: 61 DGVKREVEILKSKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKLRGN 120
DGVKREVEILKSKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKLRGN
Sbjct: 61 DGVKREVEILKSKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKLRGN 120
Query: 121 GYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCY 180
GYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCY
Sbjct: 121 GYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCY 180
Query: 181 YCQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKIEKVEALLRALQ 240
YCQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKIEKVEALLRALQ
Sbjct: 181 YCQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKIEKVEALLRALQ 240
Query: 241 PLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHK 300
PLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHK
Sbjct: 241 PLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHK 300
Query: 301 VEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGGKVRAHYFMPLP 360
VEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGGKVRAHYFMPLP
Sbjct: 301 VEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGGKVRAHYFMPLP 360
Query: 361 GTPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINISRRLQKLIEEFYEEPMSYHGN 420
GTPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINISRRLQKLIEEFYEEPMSYHGN
Sbjct: 361 GTPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINISRRLQKLIEEFYEEPMSYHGN 420
Query: 421 VKVIC 425
VKVIC
Sbjct: 421 VKVIC 425
>pir||G71177 hypothetical protein PH1701 - Pyrococcus horikoshii
>gi|3258131|dbj|BAA30814.1| (AP000007) 428aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 428
Score = 791 bits (2021), Expect = 0.0
Identities = 374/424 (88%), Positives = 404/424 (95%)
Query: 2 SVEVAVRITRRNHNAFVHLLAALESQGYDLSNVLVTKDINEIIKARPSVILYSFYSQEVD 61
S+EVAVR+TRRNHNAFVHLLAALESQGYDLSN+LVTKD+NEI+KA+P V+LYSFYSQEVD
Sbjct: 5 SMEVAVRLTRRNHNAFVHLLAALESQGYDLSNILVTKDLNEIVKAKPKVVLYSFYSQEVD 64
Query: 62 GVKREVEILKSKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKLRGNG 121
VK+EVEILK K+ + VAGGYHAIAMPKHTL VLGFDIAVIGEGEE LY LL L+ +
Sbjct: 65 EVKKEVEILKEKINPILVAGGYHAIAMPKHTLNVLGFDIAVIGEGEETLYRLLTSLKKSN 124
Query: 122 YKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCYY 181
YK+TK+LT++KGLAFYLG F FTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCYY
Sbjct: 125 YKITKELTDIKGLAFYLGERFFFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCYY 184
Query: 182 CQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKIEKVEALLRALQP 241
CQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILK+EKVEALLRALQP
Sbjct: 185 CQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKVEKVEALLRALQP 244
Query: 242 LRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHKV 301
LRKEGRRLFYGTFPSEVRP+FVTRET+ELLV YTDT+R+AIGAQSGD+AMLKAMHR+HKV
Sbjct: 245 LRKEGRRLFYGTFPSEVRPDFVTRETLELLVKYTDTKRIAIGAQSGDNAMLKAMHRLHKV 304
Query: 302 EHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGGKVRAHYFMPLPG 361
EHV+NAVEL+LEYGL PVVDFIVGLPNE+PESQ+KSIELMKWIMRKGGKVRAHYFMPLPG
Sbjct: 305 EHVINAVELSLEYGLEPVVDFIVGLPNESPESQKKSIELMKWIMRKGGKVRAHYFMPLPG 364
Query: 362 TPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINISRRLQKLIEEFYEEPMSYHGNV 421
TPWARCKPSPLS EMKKFLGRMAAEGKIEGSWGVQINISRRLQKL+EEFYEEPMSYHG V
Sbjct: 365 TPWARCKPSPLSNEMKKFLGRMAAEGKIEGSWGVQINISRRLQKLMEEFYEEPMSYHGKV 424
Query: 422 KVIC 425
K++C
Sbjct: 425 KMLC 428
>pir||F64485 hypothetical protein MJ1487 - Methanococcus jannaschii
>gi|1592124|gb|AAB99497.1| (U67589) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 426
Score = 291 bits (736), Expect = 1e-77
Identities = 165/423 (39%), Positives = 250/423 (59%), Gaps = 26/423 (6%)
Query: 5 VAVRITRRNHNAFVHLLAALESQGYDLSNVLV----TKDI---NEIIKARPSVIL-YSFY 56
+ V T+ + N+F L+ ALE Y N+ + KDI E++K V++ SF+
Sbjct: 7 LVVYYTKLHKNSFNALIGALEIDEY-FDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFF 65
Query: 57 SQEVDGVKREVEILKSKV-----KAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALY 111
+ E+ + LK+K K +++AGG H PK TL+ LGFD+ IGEGEE
Sbjct: 66 TTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLK-LGFDVVCIGEGEETFP 124
Query: 112 NLLLKLRGNGYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEI 171
+ + + +D +VKG+A+ +F++TG K D K+PP+P +EI
Sbjct: 125 EFIKAVNED-----EDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEI 179
Query: 172 SRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKY-----SRRMKDMRYITPNAFAYGSPGG- 225
+RGCP+ CY+CQTP G ++RHR ++ I KY R +KD+R+ITPNAF YGS G
Sbjct: 180 TRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGK 239
Query: 226 ILKIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQ 285
L I+K+E LL +++ + R+F+GTFPSEVRPE V ET++L++ Y D + L IGAQ
Sbjct: 240 TLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQ 299
Query: 286 SGDDAMLKAMHRVHKVEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIM 345
SG + +L+ HR H VE V NAV +A + GL VDFI GLP ET E K+I++MK ++
Sbjct: 300 SGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLI 359
Query: 346 RKGGKVRAHYFMPLPGTPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINISRRLQK 405
+ G K+ AH FMPLP TP+A+ P + +++ + + +G G+W Q I++++ K
Sbjct: 360 KMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWHNQEIIAQKISK 419
Query: 406 LIE 408
++
Sbjct: 420 YLK 422
>pir||A72408 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4980678|gb|AAD35275.1|AE001703_4 (AE001703)
conserved hypothetical protein [Thermotoga maritima]
Length = 397
Score = 248 bits (627), Expect = 8e-65
Identities = 151/409 (36%), Positives = 224/409 (53%), Gaps = 33/409 (8%)
Query: 5 VAVRITRRNHNAFVHLLAALESQGYDLSNVLVTKDINEIIKARPSVILYSFYSQEVDGVK 64
+ R + N + LL+ + S+ D+ V + + +++ YSF S ++D V+
Sbjct: 3 ILFREMKNNWYSLAALLSTIYSRHLDVEARPVKFEEIKKFPPEKTIVAYSFMSFDLDTVR 62
Query: 65 REVEILKSKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKLRGNGYKV 124
EV+ LK + + +AGG H A P+ LR +GFD G+GEE N+L L G K+
Sbjct: 63 EEVKTLKERGYTL-IAGGPHVTADPEGCLR-MGFDHVFTGDGEE---NILKFLMGERKKI 117
Query: 125 TKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCYYCQT 184
F G +K + +PP+ + P+EI+RGCPF C YCQT
Sbjct: 118 -------------------FDGISKRVNLNHYPPFLPSKGIYMPIEITRGCPFSCAYCQT 158
Query: 185 PYAKGFRMRHRPIDQIVKYSRR-----MKDMRYITPNAFAYGSPGGIL-KIEKVEALLRA 238
P G R+RHR +D +V Y++ K R+I PN+F YGS G+ +EK+E LL
Sbjct: 159 PIIAGRRVRHRDVDVVVHYAKLGVKHGRKLARFIAPNSFGYGSKNGVTPNVEKIEELLYG 218
Query: 239 LQPLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRV 298
L+ + E +++GTFPSEVRPE VT E ++++ Y + R + IGAQSG D +LK + R
Sbjct: 219 LKKVGIE--EIYFGTFPSEVRPESVTDEVLKVVKKYVNNRSIVIGAQSGSDRILKIIKRG 276
Query: 299 HKVEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIE-LMKWIMRKGGKVRAHYFM 357
H VE V A+E +G P VDFI G P ET E K+ ++K + R G K+ AH FM
Sbjct: 277 HTVEQVEEAIEKISLHGFIPHVDFIFGFPFETEEDVEKTFSFIVKIVERYGAKIHAHTFM 336
Query: 358 PLPGTPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINISRRLQKL 406
PLPGT P L+E KFLGR+A++G ++G W Q ++R++ ++
Sbjct: 337 PLPGTELFNAGPGRLTEVHYKFLGRLASKGILDGYWMKQEMLARKVYEI 385
>gb|AAB97826.1| (AF013216) unknown [Myxococcus xanthus]
Length = 427
Score = 237 bits (598), Expect = 2e-61
Identities = 143/403 (35%), Positives = 216/403 (53%), Gaps = 25/403 (6%)
Query: 16 AFVHLLAALESQG--------YDLSNVLVTKDINEIIKARPSVIL-YSFYSQEVDGVKRE 66
AF L A+ES + S + I E + A +V+ +SFYS E
Sbjct: 20 AFTVLAGAVESDPALADVTLHFPRSRETLLDTIRERVDAGDTVVAAWSFYSASFAPAAEE 79
Query: 67 VEILKSKVKA---VFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLK-LRGNGY 122
+ ++ +++ + +AGG HA A TL+ GFD+ +GEGE +L LL + LRG
Sbjct: 80 LAWVRERLEGRDVLCIAGGVHATAETLQTLQA-GFDLVAVGEGEYSLRALLGRVLRGEVP 138
Query: 123 KVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCYYC 182
+ E G+A+ G V G + FPP+ +EI+RGC + C +C
Sbjct: 139 R------ETHGVAYLKDGKLVQHGRGEGVQLDDFPPFAARNGQYGAIEITRGCIYACRFC 192
Query: 183 QTPYAKGFRMRHRPIDQIVKYSRRMK-----DMRYITPNAFAYGSPGGILKIEKVEALLR 237
QTP+ R RHR + + ++R ++ D+R+ITP + +YG+ + ++ VEALL
Sbjct: 193 QTPFMSKARFRHRSVANVAHWARELRRSGRRDIRFITPTSMSYGTADESVNLDAVEALLA 252
Query: 238 ALQPLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHR 297
A++ R++YGTFPSEVRPE VT E +ELL Y L IG QSG + +L++ R
Sbjct: 253 AVKEAMAPDGRVYYGTFPSEVRPEHVTPEALELLKRYVHNDNLIIGGQSGSERILQSTRR 312
Query: 298 VHKVEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGGKVRAHYFM 357
H VE VV A +A+E G P VDFI+GLP E PE ++ LM+ + G +V H FM
Sbjct: 313 GHDVETVVRATRIAVECGFVPNVDFILGLPGEEPEDVDATVALMEKLAGLGARVHGHTFM 372
Query: 358 PLPGTPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQINIS 400
PLPGTP+ P + E ++ L R+A++G++ G W Q+ ++
Sbjct: 373 PLPGTPFRDAPPGSVDEATQRKLDRLASQGRLYGHWKQQVALA 415
>pir||H72516 hypothetical protein APE2109 - Aeropyrum pernix (strain K1)
>gi|5105808|dbj|BAA81120.1| (AP000063) 447aa long
hypothetical protein [Aeropyrum pernix]
Length = 447
Score = 198 bits (497), Expect = 1e-49
Identities = 132/395 (33%), Positives = 202/395 (50%), Gaps = 26/395 (6%)
Query: 15 NAFVHLLAALESQGYDLSNVLVTKDINEIIK-----ARPSVILYSFYSQEVDGVKREVEI 69
NAF + +AL G D+ +V + + +++ R V++Y S ++ EI
Sbjct: 9 NAFAPVASALAGSGVDVRIEMVEESPDPVVRELVRRGRRVVVMYGVSSPAF--LELAGEI 66
Query: 70 LKSKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKL-RGNGYKVTKDL 128
+ A V GG HA LR LG AV+G+GE A ++ ++ G+G +
Sbjct: 67 SRVSRLAPTVVGGPHATGAYWQVLR-LGAAAAVVGDGEIAAVEIVRRIAEGSGLEEPPPN 125
Query: 129 TEVKGLAFYLGGDFVF--TGFAKVEDFWKFPPYPEGLKLISPMEISRGCPFGCYYCQTPY 186
T A GG F A+++D+ P YP L L P+EI RGC + C +CQ P+
Sbjct: 126 T-----AIMAGGRFKVGPVKLARLDDY--SPHYPR-LGLFPPIEIMRGCSYRCMFCQVPW 177
Query: 187 AKGFRMRHRPIDQIVK-----YSRRMKDMRYITPNAFAYGSPGGILKIEKVEALLRALQP 241
++R R ++ + + ++R++ P FAYGS L+ A+ L
Sbjct: 178 EFKSQVRFRSVESVAAAAADYVAAGKSEIRFVAPIGFAYGSED--LRTPNPAAVEELLSR 235
Query: 242 LRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHKV 301
+R G + + G+FPSE RPEFVT E + ++ RR++IG QSG D +L+ + R H V
Sbjct: 236 VRAVGGKPYLGSFPSETRPEFVTPEILRVVRRLAYNRRISIGLQSGSDMLLERVGRGHGV 295
Query: 302 EHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGGKVRAHYFMPLPG 361
E V A LA+EYG TPVVD I G+P E+ E +++ M + G ++R H+F+PLPG
Sbjct: 296 EEAVRAAGLAIEYGFTPVVDIIFGMPGESYEDVVETVNAMYRLSSMGARLRLHHFLPLPG 355
Query: 362 TPWARCKPSPLSEEMKKFLGRMAAEGKIEGSWGVQ 396
TP AR P PL +K + ++ G +EG W Q
Sbjct: 356 TPLARSPPKPLHPLYRKAVLKLLGRGVLEGHWEEQ 390
>emb|CAC11633.1| (AL445064) P-methyltransferase related protein [Thermoplasma
acidophilum]
Length = 529
Score = 90.1 bits (220), Expect = 4e-17
Identities = 84/348 (24%), Positives = 150/348 (42%), Gaps = 60/348 (17%)
Query: 47 RPSVILYSFYSQEVDGVKREVEILKSKVKAVF----VAGGYHAIAMPKHTLRVLGFDIAV 102
RP VI + ++ ++ L ++KA++ VAGG+ A +P L GFDI V
Sbjct: 67 RPDVIGITLHATAAHAFSQD---LAKRIKAIYNPLIVAGGHQATFVPGELLDN-GFDIIV 122
Query: 103 IGEGEEALYNLLLKLRGNGYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPE- 161
+GEG+EA ++L R N D +++ G+ F G + T ++ D P P
Sbjct: 123 LGEGDEAFRDVLEHYRDNA-----DFSDIPGIIFKSGNMKIRTEKRELIDDLDRLPIPAF 177
Query: 162 -------------GLKLISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRMK 208
G ++ +E +RGCP+ C +C G + R++ D+I++ R +K
Sbjct: 178 DLVDKERYTFKVFGEGSVATVETARGCPYACDFCSVTPTWGNKWRNKSNDRIMEELRIVK 237
Query: 209 DMRY----ITPNAFAYGSPGGILKIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVT 264
+ Y T + F + P K+ LF ++ +F+
Sbjct: 238 SLGYRWVFFTDDIFV-------------------VYPNVKQRSDLFDRIIEEDLGLKFIV 278
Query: 265 RETIELLVDYTDTRRLA---------IGAQSGDDAMLKAMHRVHKVEHVVNAVELALEYG 315
+ ++ D R A +G +SG + +LKAMH+ VNAV++ +
Sbjct: 279 QMRADVTSKNPDLIRKASQAGLTIAFLGIESGSEEVLKAMHKGIMTSASVNAVKILTQNN 338
Query: 316 LTPVVDFIVGLPNETPESQRKSIELMKWIMRKG-GKVRAHYFMPLPGT 362
+ + ++G P E+ K+I+ + + R G ++ + PLPGT
Sbjct: 339 IVVLGGMMLGAPYESFRDMMKTIKFSRVLARAGIDAIQISTYTPLPGT 386
>pir||B69023 conserved hypothetical protein MTH1171 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622278|gb|AAB85660.1| (AE000886)
phosphonoacetaldehyde methylase [Methanobacterium
thermoautotrophicum]
Length = 438
Score = 83.1 bits (202), Expect = 6e-15
Identities = 95/335 (28%), Positives = 141/335 (41%), Gaps = 54/335 (16%)
Query: 61 DGVKREVEILK--------------SKVKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEG 106
DGVK E+ + +K+ V GG +I P+ R L D+ V+GEG
Sbjct: 37 DGVKSEIVFISLQSTIHLLRYRDIINKMGGFRVVGGPVSID-PEMVFRYLDVDLVVMGEG 95
Query: 107 EEALYNLLLKLRGNGYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYP-----E 161
E+ + ++ GN +V G AF V + + P P E
Sbjct: 96 EDKVGPVMELAAGNCKP-----EDVPGAAFRSPEGIVVSESSPCPMERPLPLVPGDISRE 150
Query: 162 GLKLISP-MEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAY 220
++ S +E RGCP C +CQ P G +R RP+ I+ R +K FA
Sbjct: 151 DIRGASVYIETHRGCPGNCTFCQVPEFFGRNVRSRPLKDIIMEVRELKSSG---ARRFAI 207
Query: 221 GSPGGIL---------KIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVTRETIELL 271
G L E LLR + + R L T P ++R + V+ E ++ +
Sbjct: 208 SGGTGTLYGSSKFRGIDEEAFRDLLRCISEVTGS-RNL---TVP-DIRVDMVSPEILDAI 262
Query: 272 VDYTDTRRLAIGAQSGDDAMLKAMHRVHKVEHVVNAVELALEYGLTPVVDFIVGLPNETP 331
+YT+ + G +SG ML+ M + + VV AVELA EY L FIVG P E
Sbjct: 263 SEYTNGW-VFYGIESGSRRMLRKMKKGITPDQVVEAVELAREYNLKVAGSFIVGYPGEDD 321
Query: 332 ESQRKSIELMKWIMRKGGKVRAHYFM----PLPGT 362
+ ++++EL +M YF+ PLPGT
Sbjct: 322 DDYQETLELADELMLD------DYFVSIAEPLPGT 350
>pir||E72242 Mg-protoporphyrin IX monomethyl ester oxidative cyclase-related
protein - Thermotoga maritima (strain MSB8)
>gi|4982104|gb|AAD36604.1|AE001800_14 (AE001800)
Mg-protoporphyrin IX monomethyl ester oxidative
cyclase-related protein [Thermotoga maritima]
Length = 441
Score = 75.3 bits (182), Expect = 1e-12
Identities = 79/350 (22%), Positives = 152/350 (42%), Gaps = 37/350 (10%)
Query: 53 YSFYSQEVDGVKRE------VEILKSKVKA---VFVAGGYHAIAMPKHTLRVLGFDIAVI 103
++F +V G+ + VE + K KA V GG HA A L+ D V+
Sbjct: 55 FNFRDYDVVGISADTVRFPVVERIAKKAKAQNVTVVMGGPHATAYYHEILQKGLCDYVVL 114
Query: 104 GEGEEALYNLLLKLRGNGYKVTKDLTEVKGLAFYLGGDFVFTGFAKVEDFWKFPPYPEGL 163
GEGE A +L+ + N + + G+A+ G+ + +E+ P +P+
Sbjct: 115 GEGERAFSDLVESIASN-----EKYPLIPGVAYMKDGEVIALPSRFLENLDDLP-FPDRE 168
Query: 164 KL-----------ISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRMKDMRY 212
K+ + + SRGCPF C +C G R+R R I+ ++ + +K + Y
Sbjct: 169 KVHLYRTKFAGERATSLITSRGCPFNCEFCSASQFMGRRIRWRSIENVIDELKILKKLGY 228
Query: 213 ITPNAFAYGSPGGILKIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVTRETIELLV 272
+ + + ++V L + +RK+ R ++ ++ E + RE + +
Sbjct: 229 ---GSVIFFDDNFTINPKRVVNLCEEM--MRKDLRFKWWAFSRAD---ELLGREDMVEAM 280
Query: 273 DYTDTRRLAIGAQSGDDAMLKAMHRVHKVEHVVNAVELALEYGLTPVVDFIVGLPNETPE 332
R L IG +S +D +L+ + K + + ++L +Y + F++G +T +
Sbjct: 281 SKAGCRMLFIGFESANDEVLEEYGKNLKSDIAFDVMKLLKKYKVDVFASFVIGALKDTRK 340
Query: 333 SQRKSIELMKWIMRKGGKVRAHYFMPLPGTP-WARCKPSPLSEEMKKFLG 381
+ K+++ K + K V+ P PGT + + K ++ +KF G
Sbjct: 341 TIEKTVKFAKKL--KASIVQFSILTPYPGTALFEKLKHLIFEKDWRKFDG 388
>sp|Q58275|Y865_METJA HYPOTHETICAL PROTEIN MJ0865 >gi|2128548|pir||A64408 conserved
hypothetical protein MJ0865 - Methanococcus jannaschii
>gi|1591549|gb|AAB98870.1| (U67530) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 449
Score = 70.6 bits (170), Expect = 3e-11
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 43/325 (13%)
Query: 24 LESQGYDLSNVLVTKDINEIIKARPSVILYSFYS----------QEVDGVKREVEILKSK 73
L+ +GY NV + + I++ + + VI++S YS + +D +K+ + K+K
Sbjct: 31 LKHKGY---NVHLVRKIDKTLFLKSDVIIFSLYSTLHILDKNIREAIDFIKK---VRKNK 84
Query: 74 VKAVFVAGGYHAIAMPKHTLRVLGFDIAVIGEGEEALYNLLLKLRGNGYKVTKDLTEVKG 133
K V+VAG P+ L L D ++GEGE ++ G K +G
Sbjct: 85 TK-VYVAGCVSTY--PEIILNELNVDGVIVGEGEITTPKII-----EGDK--------EG 128
Query: 134 LAFYLGGDFVFTGFAKVEDF-WKFPPYPEGLKLISP------MEISRGCPFGCYYCQTPY 186
LA+ G + V + D P P+ ++ S +E RGC C +CQ P
Sbjct: 129 LAYKEGDEIVINYPKEKPDLNHPLPLIPKDIEQQSIRGANVYIETHRGCLGNCTFCQVPK 188
Query: 187 AKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKIEKVEALLRALQPLRKEG 246
G +R R ++ +V+ + K R G G + +K + + L K
Sbjct: 189 FFGKTIRSRDVEDVVEEVKAFK--RAGAKRIAISGGTGSLYAFKKSINRDKFFELLEKVS 246
Query: 247 RRLFYGTFP-SEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDDAMLKAMHRVHKVEHVV 305
+ ++R ++V E +E + +YT + G +SG D +LK M + E +
Sbjct: 247 EVIGKNNLSVPDMRVDYVDEEILEAIKNYT-IGWVFYGIESGSDKILKDMKKGTNREKNL 305
Query: 306 NAVELALEYGLTPVVDFIVGLPNET 330
+A++LA + G+ FIV P ET
Sbjct: 306 DAIKLAKDCGVKVAGSFIVAYPTET 330
>sp|Q9ZCE8|Y808_RICPR HYPOTHETICAL PROTEIN RP808 >gi|7445345|pir||B71642 hypothetical
protein RP808 - Rickettsia prowazekii
>gi|3861335|emb|CAA15234.1| (AJ235273) unknown
[Rickettsia prowazekii]
Length = 445
Score = 69.9 bits (168), Expect = 5e-11
Identities = 58/215 (26%), Positives = 99/215 (45%), Gaps = 18/215 (8%)
Query: 159 YPEGLKLISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRM-----KDMRYI 213
YP+G S + + GC C +C PY +G R ++Q+ + S + K++ +
Sbjct: 148 YPQGAS--SFISVQEGCDKFCTFCVVPYTRGAEFS-RSVEQVYRESLKAVSNDAKEIILL 204
Query: 214 TPNAFAYGSPGGILKIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVTRETIE-LLV 272
N AY G KI + LL+ L + R + + P ++ + + E L+
Sbjct: 205 GQNVNAYHGKGPKDKIFTLADLLKCLAQIPNLARLRYMTSHPIDMTDDLIKLHGTEPKLM 264
Query: 273 DYTDTRRLAIGAQSGDDAMLKAMHRVHKVEHVVNAVELALEYGLTPVV--DFIVGLPNET 330
+ L + QSG + +LKAM+R H ++ N + E V+ DFIVG P ET
Sbjct: 265 PF-----LHLPVQSGSNKILKAMNRKHDRDYYFNIINRLREARSDIVLSSDFIVGFPGET 319
Query: 331 PESQRKSIELMKWIMRKGGKVRAHYFMPLPGTPWA 365
+ +++L+ + K G+ + + P PGTP A
Sbjct: 320 EQDFEDTLDLVHRV--KYGQCYSFKYSPRPGTPGA 352
>gi|11498846 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|6226417|sp|O29021|YC47_ARCFU HYPOTHETICAL PROTEIN
AF1247 >gi|7429893|pir||F69405 conserved hypothetical
protein AF1247 - Archaeoglobus fulgidus
>gi|2649334|gb|AAB89997.1| (AE001018) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 405
Score = 69.1 bits (166), Expect = 9e-11
Identities = 67/217 (30%), Positives = 100/217 (45%), Gaps = 23/217 (10%)
Query: 166 ISPMEISRGCPFGCYYCQTPYAKGFRMRHRPIDQIVKYSRRM-----KDMRYITPNAFAY 220
I+ + IS GC C +C T +A+G R+R +D IV+ + R ++++ + + AY
Sbjct: 115 IAIVSISEGCLGKCSFCATKFARG-RLRSFSMDAIVREAERAVRAGYREIQLTSQDTGAY 173
Query: 221 GSPGGILKIEKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRR- 279
G G + + LLR + + E R + P+ R EL+ Y+ +
Sbjct: 174 GMDKGRAMLPE---LLRKISEIEGEFR-----VRVGMMNPQHAVRMLDELINAYSSEKIY 225
Query: 280 --LAIGAQSGDDAMLKAMHRVHKVEHVVNAVELALEYGLTPVV---DFIVGLPNETPESQ 334
L I QSGD+ +L+ M R H VE V VE A V+ D IVG P ET E+
Sbjct: 226 KFLHIPVQSGDNRILEDMKRNHTVEDYVEVVE-AFRNSFDDVLISTDIIVGFPTETEEAF 284
Query: 335 RKSIELMKWIMRKGGKVRAHYFMPLPGTPWARCKPSP 371
KS EL+K + V + GTP AR + P
Sbjct: 285 WKSYELIK--ETRPDIVNITRYSARKGTPAARLRDIP 319
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.141 0.418
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162300881
Number of Sequences: 2977
Number of extensions: 7155970
Number of successful extensions: 22969
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 22941
Number of HSP's gapped (non-prelim): 12
length of query: 425
length of database: 189,106,746
effective HSP length: 54
effective length of query: 371
effective length of database: 156,788,448
effective search space: 58168514208
effective search space used: 58168514208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 166 (69.1 bits)