BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0323 (gltX) DE:glutamyl-tRNA synthetase (gltX)
(571 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75165 glutamyl-tRNA synthetase (gltx) PAB0323 - Pyrococcus... 1180 0.0
sp|O59314|SYE_PYRHO GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 1095 0.0
sp|Q58772|SYE_METJA GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 592 e-168
sp|P95968|SYE_SULSO GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 548 e-155
gb|AAK40450.1| Glutamyl-tRNA synthetase (gltX) [Sulfolobus solfa... 548 e-155
sp|Q50543|SYE_METTM GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 538 e-152
gi|11497876 glutamyl-tRNA synthetase (gltX) [Archaeoglobus fulgi... 531 e-150
sp|O26157|SYE_METTH GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 531 e-150
sp|Q9Y9H1|SYE_AERPE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 472 e-132
emb|CAC12071.1| (AL445066) glutamyl-tRNA synthetase related prot... 448 e-125
gb|AAG19534.1| (AE005044) glutamyl-tRNA synthetase; GltS [Haloba... 420 e-116
gb|AAF97196.1|AF268611_20 (AF268611) glutamyl-tRNA synthetase [u... 388 e-106
gi|11426207 glutamyl-prolyl tRNA synthetase [Homo sapiens] 280 3e-74
gi|4758294 glutamyl-prolyl tRNA synthetase; glutamate tRNA ligas... 279 5e-74
emb|CAA30354.1| (X07466) glutaminyl-tRNA synthetase [Homo sapiens] 269 7e-71
gi|6324742 glutaminyl-tRNA synthetase; Gln4p [Saccharomyces cere... 260 3e-68
pir||S38809 glutamate--tRNA ligase (EC 6.1.1.17) - human (fragment) 257 2e-67
pir||T27567 hypothetical protein ZC434.5 - Caenorhabditis elegan... 256 5e-67
pir||T37830 probable glutamate--tRNA ligase (EC 6.1.1.17) - fiss... 254 2e-66
gb|AAF56211.1| (AE003745) Aats-glupro gene product [Drosophila m... 254 2e-66
sp|P28668|SYEP_DROME MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE [... 250 3e-65
dbj|BAA90375.1| (AP001081) Similar to glutamyl-tRNA synthetase (... 246 4e-64
gb|AAA78905.1| (U32265) cytosolic glutamyl-tRNA synthetase [Sacc... 242 9e-63
sp|Q9Y7Y8|SYQ_SCHPO PROBABLE GLUTAMINYL-TRNA SYNTHETASE (GLUTAMI... 240 3e-62
gi|6321192 Ygl245wp [Saccharomyces cerevisiae] >gi|1711626|sp|P4... 239 6e-62
pir||T01200 probable glutamate--tRNA ligase (EC 6.1.1.17) F21E10... 239 6e-62
gb|AAC36469.1| (AF067773) glutamyl-tRNA synthetase [Arabidopsis ... 239 6e-62
sp|P56926|SYQ_DEIRA GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 230 3e-59
sp|P43831|SYQ_HAEIN GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 229 8e-59
sp|Q9KTA6|SYQ_VIBCH GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 213 5e-54
sp|P57490|SYQ_BUCAI GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 212 7e-54
dbj|BAB03361.1| (AP002486) ESTs AU097578(E0618),AU085793(C53601)... 210 3e-53
sp|P00962|SYQ_ECOLI GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 209 8e-53
gb|AAA87980.1| (J01617) glutaminyl-tRNA synthetase [Escherichia ... 209 8e-53
pdb|1QTQ|A Chain A, Glutaminyl-Trna Synthetase Complexed With Tr... 209 8e-53
pdb|1EUQ|A Chain A, Crystal Structure Of Glutaminyl-Trna Synthet... 209 8e-53
sp|P52780|SYQ_LUPLU GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 208 1e-52
pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Comp... 208 1e-52
pdb|1QRU|A Chain A, Glutaminyl-Trna Synthetase Mutant I129t Comp... 208 1e-52
pdb|1QRT|A Chain A, Glutaminyl-Trna Synthetase Mutant D235g Comp... 207 2e-52
pir||F83421 glutaminyl-tRNA synthetase PA1794 [imported] - Pseud... 207 2e-52
sp|Q9PDP1|SYQ_XYLFA GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 200 4e-50
sp|O62431|SYQ_CAEEL PROBABLE GLUTAMINYL-TRNA SYNTHETASE (GLUTAMI... 198 2e-49
sp|P57000|SYQ_NEIMA GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 198 2e-49
pir||D81799 glutamine--tRNA ligase (EC 6.1.1.18) NMA1748 [import... 198 2e-49
gb|AAD38643.1|AF145668_1 (AF145668) BcDNA.GH11673 [Drosophila me... 196 5e-49
gb|AAF56434.1| (AE003751) BcDNA:GH11673 gene product [Drosophila... 196 5e-49
sp|P56927|SYQ_NEIMB GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA ... 196 8e-49
gi|4826960 glutaminyl-tRNA synthetase; glutamine-tRNA synthetase... 189 6e-47
gb|AAG35495.1|AF130117_26 (AF130067) PRO2195 [Homo sapiens] 189 6e-47
sp|O67271|SYE_AQUAE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 155 9e-37
gb|AAB62548.1| (AF005489) glutaminyl-tRNA synthetase [Nosema loc... 145 2e-33
gb|AAB62550.1| (AF005491) glutaminyl-tRNA synthetase [Trichomona... 141 2e-32
sp|Q9ZCT8|SYE2_RICPR GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA... 140 3e-32
sp|P22249|SYE_BACST GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 137 3e-31
pir||PC4398 glutamine--tRNA ligase (EC 6.1.1.18) - Vibrio choler... 136 5e-31
sp|Q9ZFA3|SYE_RHOSH GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 134 3e-30
pir||A81337 glutamate--tRNA ligase (EC 6.1.1.17) Cj1288c [import... 133 6e-30
sp|Q9X2I8|SYE2_THEMA GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA... 128 2e-28
gb|AAF49463.1| (AE003527) CG4573 gene product [Drosophila melano... 126 8e-28
dbj|BAB03828.1| (AP001507) glutamyl-tRNA synthetase [Bacillus ha... 126 8e-28
sp|P22250|SYE_BACSU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 125 2e-27
pir||F82019 glutamate--tRNA ligase (EC 6.1.1.17) NMA0250 [import... 122 1e-26
sp|Q9X172|SYE1_THEMA GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA... 122 1e-26
pir||A81247 glutamyl-tRNA synthetase NMB0003 [imported] - Neisse... 121 2e-26
pir||G82104 glutamyl-tRNA synthetase VC2214 [imported] - Vibrio ... 121 3e-26
sp|P43818|SYE_HAEIN GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 120 3e-26
sp|P27000|SYE_THETH GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 120 6e-26
gb|AAA61403.1| (L39015) mitochondrial glutamyl-tRNA synthetase [... 120 6e-26
gi|6324540 Mitochondrial glutamyl-tRNA synthetase; Mse1p [Saccha... 120 6e-26
sp|P04805|SYE_ECOLI GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 118 2e-25
sp|P96551|SYE1_HELPY GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA... 117 3e-25
sp|Q9ZLZ7|SYE1_HELPJ GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA... 116 8e-25
gb|AAB62549.1| (AF005490) glutamyl-tRNA synthetase [Nosema locus... 114 2e-24
sp|P57173|SYE_BUCAI GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 114 3e-24
sp|Q55778|SYE_SYNY3 GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 113 4e-24
sp|Q06560|SYE_CHLPS GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 113 4e-24
sp|O86083|SYE_LACDE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 113 7e-24
gb|AAG28798.1|AC079374_1 (AC079374) glutaminyl-tRNA synthetase (... 112 1e-23
pir||A36909 glutamyl-tRNA synthetase homolog gltX - Chlamydia ps... 112 1e-23
sp|P75114|SYE_MYCPN GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 111 2e-23
pir||F81671 glutamyl-tRNA synthetase TC0730 [imported] - Chlamyd... 109 1e-22
sp|Q43768|SYE_HORVU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 109 1e-22
pir||E83254 glutamyl-tRNA synthetase PA3134 [imported] - Pseudom... 108 1e-22
sp|Q43794|SYE_TOBAC GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 108 1e-22
pir||C82871 glutamyl-tRNA synthetase UU599 [imported] - Ureaplas... 108 2e-22
dbj|BAB10273.1| (AB008266) glutamate-tRNA ligase [Arabidopsis th... 108 2e-22
sp|Q9XCL6|SYE_PSEAE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 107 3e-22
pir||SYRZET glutamate--tRNA ligase (EC 6.1.1.17) - Rhizobium mel... 107 3e-22
sp|P15189|SYE_RHIME GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 107 3e-22
sp|Q9ZLJ1|SYE2_HELPJ GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA... 106 6e-22
sp|P53662|SYE_MYCPU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 106 7e-22
sp|O84451|SYE_CHLTR GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 106 9e-22
sp|P45631|SYE_AZOBR GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 105 1e-21
sp|P47700|SYE_MYCGE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 105 1e-21
gb|AAA61907.1| (U17699) glutamyl tRNA synthetase [Azospirillum b... 105 1e-21
sp|O51345|SYE_BORBU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 105 1e-21
sp|O25360|SYE2_HELPY GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA... 103 6e-21
pir||T32582 hypothetical protein T07A9.2 - Caenorhabditis elegan... 101 2e-20
pir||H75514 glutamyl-tRNA synthetase - Deinococcus radiodurans (... 100 4e-20
pir||C82757 glutamyl-tRNA synthetase XF0822 [imported] - Xylella... 100 5e-20
sp|Q9ZDK3|SYE1_RICPR GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA... 100 7e-20
pir||E75366 glutamyl-tRNA synthetase-related protein - Deinococc... 90 5e-17
gb|AAB36521.1| (U76418) glutamyl-tRNA synthetase [Neisseria gono... 85 2e-15
emb|CAC00262.1| (AL160371) probable glutaminyl-tRNA synthetase [... 84 5e-15
sp|O86528|SYE_STRCO GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 82 1e-14
pir||A83055 probable aminoacyl-transfer RNA synthetase (class I)... 82 2e-14
sp|P31970|SYE_SYNP2 GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 81 3e-14
pir||S35031 glutamate--tRNA ligase (EC 6.1.1.17) - Synechococcus... 81 3e-14
sp|O52914|SYE_CAMJE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LI... 71 4e-11
>pir||G75165 glutamyl-tRNA synthetase (gltx) PAB0323 - Pyrococcus abyssi
(strain Orsay) >gi|5457916|emb|CAB49406.1| (AJ248284)
glutamyl-tRNA synthetase (gltX) [Pyrococcus abyssi]
Length = 571
Score = 1180 bits (3020), Expect = 0.0
Identities = 571/571 (100%), Positives = 571/571 (100%)
Query: 1 MEVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLS 60
MEVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLS
Sbjct: 1 MEVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLS 60
Query: 61 LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAA 120
LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAA
Sbjct: 61 LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAA 120
Query: 121 ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELY 180
ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELY
Sbjct: 121 ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELY 180
Query: 181 YKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA 240
YKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA
Sbjct: 181 YKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA 240
Query: 241 VVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFR 300
VVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFR
Sbjct: 241 VVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFR 300
Query: 301 GQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRL 360
GQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRL
Sbjct: 301 GQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRL 360
Query: 361 GTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVP 420
GTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVP
Sbjct: 361 GTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVP 420
Query: 421 MEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVE 480
MEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVE
Sbjct: 421 MEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVE 480
Query: 481 IVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANV 540
IVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANV
Sbjct: 481 IVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANV 540
Query: 541 KAGEIVQFERFGFVRIDKIEGEKVVAIYAHK 571
KAGEIVQFERFGFVRIDKIEGEKVVAIYAHK
Sbjct: 541 KAGEIVQFERFGFVRIDKIEGEKVVAIYAHK 571
>sp|O59314|SYE_PYRHO GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437749|pir||F71049 glutamine--tRNA ligase (EC
6.1.1.18) - Pyrococcus horikoshii
>gi|3258115|dbj|BAA30798.1| (AP000006) 570aa long
hypothetical glutaminyl-tRNA synthetase [Pyrococcus
horikoshii]
Length = 570
Score = 1095 bits (2801), Expect = 0.0
Identities = 517/571 (90%), Positives = 554/571 (96%), Gaps = 1/571 (0%)
Query: 1 MEVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLS 60
M+VE+IALK+ALINAIEHGGKAN KAVIGKVLGENPELR +A+EI+PIINKVVEEVNSL+
Sbjct: 1 MDVEKIALKHALINAIEHGGKANLKAVIGKVLGENPELRPRAKEIIPIINKVVEEVNSLA 60
Query: 61 LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAA 120
DEQ KL +IYPEYFEKKEEKKE KKGLP LPKAEKGKVVTRFAPNPDGAFHLGNARAA
Sbjct: 61 RDEQLEKLKDIYPEYFEKKEEKKE-KKGLPLLPKAEKGKVVTRFAPNPDGAFHLGNARAA 119
Query: 121 ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELY 180
ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFY+MIIEDLEWLGIKPDEIVYASDRLE+Y
Sbjct: 120 ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYKMIIEDLEWLGIKPDEIVYASDRLEIY 179
Query: 181 YKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA 240
YKYAEELIKMGKAYVCTC PEKFRELRDKGIPCPHRDEPVEVQLERW+KMLNGEYKEGEA
Sbjct: 180 YKYAEELIKMGKAYVCTCPPEKFRELRDKGIPCPHRDEPVEVQLERWKKMLNGEYKEGEA 239
Query: 241 VVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFR 300
VVRIKTDLNHPNPAVRDWPALRI+DNPNHPR GNKYRVWPLYNFASAIDDHELGVTHIFR
Sbjct: 240 VVRIKTDLNHPNPAVRDWPALRIIDNPNHPRTGNKYRVWPLYNFASAIDDHELGVTHIFR 299
Query: 301 GQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRL 360
GQEHAENETRQRYIYEYFGWEYPVT+HHGRLSIEGV+LSKSKTRKGIEEGKYLGWDDPRL
Sbjct: 300 GQEHAENETRQRYIYEYFGWEYPVTIHHGRLSIEGVVLSKSKTRKGIEEGKYLGWDDPRL 359
Query: 361 GTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVP 420
GTIRALRRRGILPEAIKELIIEVGLKKSDAT+SW+NLAAINRKLVDPIANRYFFVADP+P
Sbjct: 360 GTIRALRRRGILPEAIKELIIEVGLKKSDATISWENLAAINRKLVDPIANRYFFVADPIP 419
Query: 421 MEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVE 480
MEVEGAPEFIA+IPLHPDHPERG R L+FTP +P+YVSKDDL+LLKPG+FVRLKDLFNVE
Sbjct: 420 MEVEGAPEFIAEIPLHPDHPERGVRRLKFTPERPVYVSKDDLNLLKPGNFVRLKDLFNVE 479
Query: 481 IVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANV 540
I+EVG+KI+A+F+SFEYEIA+KN+W+M+HWV EGRPCEVIIPEGDEL+VRKGLLEKDA V
Sbjct: 480 ILEVGDKIRARFYSFEYEIAKKNRWKMVHWVTEGRPCEVIIPEGDELVVRKGLLEKDAKV 539
Query: 541 KAGEIVQFERFGFVRIDKIEGEKVVAIYAHK 571
+ EIVQFERFGFVRID+IEG+KV+AIYAHK
Sbjct: 540 QVNEIVQFERFGFVRIDRIEGDKVIAIYAHK 570
>sp|Q58772|SYE_METJA GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|2127936|pir||H64471 glutamate--tRNA ligase (EC
6.1.1.17) - Methanococcus jannaschii
>gi|1592022|gb|AAB99384.1| (U67577) glutamyl-tRNA
synthetase (gltX) [Methanococcus jannaschii]
Length = 553
Score = 592 bits (1509), Expect = e-168
Identities = 300/572 (52%), Positives = 402/572 (69%), Gaps = 22/572 (3%)
Query: 3 VERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSLD 62
+E L AL NAI++ GKANPKAV+G L ENPE RSKA+E++PI+ KVVEEVN LSLD
Sbjct: 1 MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLD 60
Query: 63 EQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAIL 122
E K KL E+ + KK+EKKE+ LP + K KVV RFAPNP G H+G+ARAA+L
Sbjct: 61 EIKKKLEELGEDV--KKKEKKEKGLELPNV----KDKVVMRFAPNPSGPLHIGHARAAVL 114
Query: 123 SYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYK 182
+ + K YGGK ILR +DTDPK PE Y+MI EDL+WLG+K DE+V SDR+ELYY+
Sbjct: 115 NDYFVKKYGGKLILRLEDTDPKRVLPEA--YDMIKEDLDWLGVKVDEVVIQSDRIELYYE 172
Query: 183 YAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVV 242
Y +LI+MG AYVC C PE+FRELR+KG+PC RD +E LE W KMLNGE + V
Sbjct: 173 YGRKLIEMGHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELEN--VAV 230
Query: 243 RIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQ 302
R+KTD+ H NP++RD+P R+ P HPR G+KY V+PL NF+ +DDH LG+TH+ RG+
Sbjct: 231 RLKTDIKHKNPSIRDFPIFRVEKTP-HPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGK 289
Query: 303 EHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGT 362
+H N +Q YIY+YFGWE P +H+G L IE ++LS S KGI+EG Y GWDD RLGT
Sbjct: 290 DHIVNTEKQAYIYKYFGWEMPEFIHYGILKIEDIVLSTSSMYKGIKEGLYSGWDDVRLGT 349
Query: 363 IRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPME 422
+RALRRRGI PEAI E++ +G+K++D SW+NL AIN++L+D A R+FFV +P +
Sbjct: 350 LRALRRRGIKPEAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFFFVWNPKKLI 409
Query: 423 VEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIV 482
+EGA + + K+ +HPD PE G REL F +YV D+L+ RL +LFN+ +
Sbjct: 410 IEGAEKKVLKLRMHPDRPEFGERELIF--DGEVYVVGDELE---ENKMYRLMELFNIVVE 464
Query: 483 EVGEKIKAKFHSFEYEIARKNKWRMIHWVP--EGRPCEVIIPEGDELIVRKGLLEKD-AN 539
+V + AK+HS +++IARKNK ++IHW+P + +V++P+G+ +++G EKD A
Sbjct: 465 KVDDIALAKYHSDDFKIARKNKAKIIHWIPVKDSVKVKVLMPDGE---IKEGFAEKDFAK 521
Query: 540 VKAGEIVQFERFGFVRIDKIEGEKVVAIYAHK 571
V+ +I+QFERFGFVRIDK + + V YAH+
Sbjct: 522 VEVDDIIQFERFGFVRIDKKDNDGFVCCYAHR 553
>sp|P95968|SYE_SULSO GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437750|pir||S75395 probable glutamine--tRNA ligase
(EC 6.1.1.18) - Sulfolobus solfataricus
>gi|1707801|emb|CAA69558.1| (Y08257) glutamyl tRNA
synthetase [Sulfolobus solfataricus]
Length = 575
Score = 548 bits (1397), Expect = e-155
Identities = 296/580 (51%), Positives = 388/580 (66%), Gaps = 22/580 (3%)
Query: 2 EVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSL 61
E+ KYAL NA++H GKA V+ K++ E PELRS AREIV II +++E+VNSL+L
Sbjct: 6 ELRETIYKYALQNAVKHNGKAETGPVMSKIIAERPELRSNAREIVKIIKEIIEQVNSLTL 65
Query: 62 DEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAI 121
++Q ++ YPE E+K+ + E++K LPPLP KG+VVTRFAPNPDG HLGNAR+AI
Sbjct: 66 EQQLTEIKAKYPELLEEKKHE-EKRKVLPPLPNV-KGQVVTRFAPNPDGPLHLGNARSAI 123
Query: 122 LSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYY 181
LSYEYAKMY GKFILRFDDTDPKVKRP Y+ I EDL+WLGIK ++ +YAS+RLELYY
Sbjct: 124 LSYEYAKMYNGKFILRFDDTDPKVKRPILDAYDWIKEDLKWLGIKWEQELYASERLELYY 183
Query: 182 KYAEELIKMGKAYVCTCKPEKFRELRD-----KGIPCPHRDEPVEVQLERWRKMLNGEYK 236
KYA LI+ G AYV TC FR+ RD K C HR E LE + KML G++K
Sbjct: 184 KYARYLIEKGYAYVDTCDSSIFRKFRDSRGKMKEPECLHRSSSPESNLELFEKMLGGKFK 243
Query: 237 EGEAVVRIKTDLNHPNPAVRDWPALRIVD---NPNHPRAGNKYRVWPLYNFASAIDDHEL 293
EGEAVVR+KTDL+ P+P+ DW LRI+D NP HPR G+KY VWP YNFAS IDDHEL
Sbjct: 244 EGEAVVRLKTDLSDPDPSQIDWVMLRIIDTAKNP-HPRVGSKYWVWPTYNFASIIDDHEL 302
Query: 294 GVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYL 353
G+TH+ R +EH N +QRYI EY GWE+P + GRL +EG ++SKSK R +E+G
Sbjct: 303 GITHVLRAKEHMSNTEKQRYISEYMGWEFPEVLQFGRLRLEGFMMSKSKIRGMLEKG--T 360
Query: 354 GWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYF 413
DDPRL T+ LRRRGILP+ IK++II+VG+K +DAT+S++N+AAINRK +DP+A R
Sbjct: 361 NRDDPRLPTLAGLRRRGILPDTIKDVIIDVGVKVTDATISFENIAAINRKKLDPVAKRIM 420
Query: 414 FVADPVPMEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRL 473
FV D VE AKIPL P E R + PG I + +D + S +RL
Sbjct: 421 FVKDAEEFSVELPESLNAKIPLIPSKQEM-NRTIIVNPGDKILIESNDAE---DNSILRL 476
Query: 474 KDLFNVEIVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVII--PEGDELIVRK 531
+L NV++ + K+ FHS + A+K +++ WV V++ E DE+ +
Sbjct: 477 MELCNVKVDKHNRKL--IFHSKTLDEAKKVNAKIVQWVKSNEKVPVMVEKAERDEIKMIN 534
Query: 532 GLLEK-DANVKAGEIVQFERFGFVRIDKIEGEKVVAIYAH 570
G EK A+++ EIVQF RFGFVR+D+ + + +++H
Sbjct: 535 GYAEKIAADLEIDEIVQFYRFGFVRVDRKDENMLRVVFSH 574
>gb|AAK40450.1| Glutamyl-tRNA synthetase (gltX) [Sulfolobus solfataricus]
Length = 575
Score = 548 bits (1397), Expect = e-155
Identities = 296/580 (51%), Positives = 388/580 (66%), Gaps = 22/580 (3%)
Query: 2 EVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSL 61
E+ KYAL NA++H GKA V+ K++ E PELRS AREIV II +++E+VNSL+L
Sbjct: 6 ELRETIYKYALQNAVKHNGKAETGPVMSKIIAERPELRSNAREIVKIIKEIIEQVNSLTL 65
Query: 62 DEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAI 121
++Q ++ YPE E+K+ + E++K LPPLP KG+VVTRFAPNPDG HLGNAR+AI
Sbjct: 66 EQQLTEIKAKYPELLEEKKHE-EKRKVLPPLPNV-KGQVVTRFAPNPDGPLHLGNARSAI 123
Query: 122 LSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYY 181
LSYEYAKMY GKFILRFDDTDPKVKRP Y+ I EDL+WLGIK ++ +YAS+RLELYY
Sbjct: 124 LSYEYAKMYNGKFILRFDDTDPKVKRPILDAYDWIKEDLKWLGIKWEQELYASERLELYY 183
Query: 182 KYAEELIKMGKAYVCTCKPEKFRELRD-----KGIPCPHRDEPVEVQLERWRKMLNGEYK 236
KYA LI+ G AYV TC FR+ RD K C HR E LE + KML G++K
Sbjct: 184 KYARYLIEKGYAYVDTCDSSIFRKFRDSRGKMKEPECLHRSSSPESNLELFEKMLGGKFK 243
Query: 237 EGEAVVRIKTDLNHPNPAVRDWPALRIVD---NPNHPRAGNKYRVWPLYNFASAIDDHEL 293
EGEAVVR+KTDL+ P+P+ DW LRI+D NP HPR G+KY VWP YNFAS IDDHEL
Sbjct: 244 EGEAVVRLKTDLSDPDPSQIDWVMLRIIDTAKNP-HPRVGSKYWVWPTYNFASIIDDHEL 302
Query: 294 GVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYL 353
G+TH+ R +EH N +QRYI EY GWE+P + GRL +EG ++SKSK R +E+G
Sbjct: 303 GITHVLRAKEHMSNTEKQRYISEYMGWEFPEVLQFGRLRLEGFMMSKSKIRGMLEKG--T 360
Query: 354 GWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYF 413
DDPRL T+ LRRRGILP+ IK++II+VG+K +DAT+S++N+AAINRK +DP+A R
Sbjct: 361 NRDDPRLPTLAGLRRRGILPDTIKDVIIDVGVKVTDATISFENIAAINRKKLDPVAKRIM 420
Query: 414 FVADPVPMEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRL 473
FV D VE AKIPL P E R + PG I + +D + S +RL
Sbjct: 421 FVKDAEEFSVELPESLNAKIPLIPSKQEM-NRTIIVNPGDKILIESNDAE---DNSILRL 476
Query: 474 KDLFNVEIVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVII--PEGDELIVRK 531
+L NV++ + K+ FHS + A+K +++ WV V++ E DE+ +
Sbjct: 477 MELCNVKVDKHNRKL--IFHSKTLDEAKKVNAKIVQWVKSNEKVPVMVEKAERDEIKMIN 534
Query: 532 GLLEK-DANVKAGEIVQFERFGFVRIDKIEGEKVVAIYAH 570
G EK A+++ EIVQF RFGFVR+D+ + + +++H
Sbjct: 535 GYAEKIAADLEIDEIVQFYRFGFVRVDRKDENMLRVVFSH 574
>sp|Q50543|SYE_METTM GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|2127692|pir||S65787 glutamate--tRNA ligase (EC
6.1.1.17) [validated] - Methanobacterium
thermoautotrophicum (strain Marburg)
>gi|1051202|gb|AAC43972.1| (U37405) glutamyl-tRNA
synthetase [Methanobacterium thermoautotrophicum]
>gi|1587650|prf||2207186A Glu-tRNA synthetase
[Methanobacterium thermoautotrophicum]
Length = 552
Score = 538 bits (1370), Expect = e-152
Identities = 279/575 (48%), Positives = 389/575 (67%), Gaps = 27/575 (4%)
Query: 1 MEVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLS 60
M VE + +YAL+NA++H GKANP AV+G V+ PELR +A E+ + VE+VNSL
Sbjct: 1 MMVEDLVYRYALMNAVKHKGKANPGAVMGAVMSNEPELRKRAPEVKEAVQAAVEKVNSLK 60
Query: 61 LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAA 120
+EQ++++ + E E+K++K++ + LP + KG+VV RFAPNP G H+G+ARAA
Sbjct: 61 PEEQQSEMERLGLEIRERKQKKRQGLRNLPDV----KGEVVLRFAPNPSGPLHIGHARAA 116
Query: 121 ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELY 180
IL++EYA+ Y GK ILR +DTDP+ R +P Y+MI DLEWLG++ DE + SDR+E+Y
Sbjct: 117 ILNHEYARRYDGKLILRIEDTDPR--RVDPEAYDMIPSDLEWLGVEWDETIIQSDRMEIY 174
Query: 181 YKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA 240
Y+Y E LI+ G AYVCTC PE FRE +++G C RD V L+RWR+M E EG A
Sbjct: 175 YEYTERLIERGGAYVCTCTPEAFREFKNEGKACHCRDLGVRENLQRWREMF--EMPEGSA 232
Query: 241 VVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFR 300
VVR+KTDL HPNPA+RDW ++RIV+ HPR G +YRV+P+ NF+ A+DDH LGVTH+ R
Sbjct: 233 VVRVKTDLQHPNPAIRDWVSMRIVE-AEHPRTGTRYRVYPMMNFSVAVDDHLLGVTHVLR 291
Query: 301 GQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRL 360
G++H N +Q Y+Y + GWE PV +H+GRL ++ + LS S R+GI EGKY GWDDPRL
Sbjct: 292 GKDHLANSEKQEYLYRHLGWEPPVFIHYGRLKMDDIALSTSGAREGIVEGKYSGWDDPRL 351
Query: 361 GTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVP 420
GTIRA+ RRGI +AI++L++E+G+K +D+T+SW + +NR +++ A RYFF ADPV
Sbjct: 352 GTIRAIARRGIRSDAIRKLMVEIGVKIADSTMSWKKIYGLNRNILEEEARRYFFAADPVR 411
Query: 421 MEVEGAPEFI-AKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNV 479
E+EG P I + LHPD PE G R L +Y+ + D L+ G +RL D NV
Sbjct: 412 FEIEGLPGPIRVERSLHPDKPELGNRILEL--NGDVYLPRGD---LREGP-LRLIDAVNV 465
Query: 480 EIVEVGEKIKAKFHSFEYEIARKNKWRMIHWVP--EGRPCEVIIPEGDELIVRKGLLEKD 537
I GE ++HS E AR+ + MIHWVP V++P+ E+ +G++E D
Sbjct: 466 -IYSDGE---LRYHSEGIEEARELQAAMIHWVPAESALKAVVVMPDASEI---EGVIEGD 518
Query: 538 AN-VKAGEIVQFERFGFVRIDKIEGEKVVAIYAHK 571
A+ ++ ++VQ ERFGF R+D GE++V YAHK
Sbjct: 519 ASELEVDDVVQLERFGFARVDS-SGERLVFYYAHK 552
>gi|11497876 glutamyl-tRNA synthetase (gltX) [Archaeoglobus fulgidus]
>gi|3334355|sp|O29979|SYE_ARCFU GLUTAMYL-TRNA SYNTHETASE
(GLUTAMATE--TRNA LIGASE) (GLURS) >gi|7437751|pir||D69282
glutamyl-tRNA synthetase (gltX) homolog - Archaeoglobus
fulgidus >gi|2650372|gb|AAB90966.1| (AE001087)
glutamyl-tRNA synthetase (gltX) [Archaeoglobus fulgidus]
Length = 551
Score = 531 bits (1354), Expect = e-150
Identities = 283/572 (49%), Positives = 386/572 (67%), Gaps = 26/572 (4%)
Query: 3 VERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSLD 62
++ + +KY + NA ++G KA+ KAV+GKV+ ENPELR KA+E++ ++ + + E +LS +
Sbjct: 1 MKEVIMKYVVQNAAKYG-KASEKAVMGKVMAENPELRKKAKEVLELVKECITEFEALSEE 59
Query: 63 EQKAKLMEIYPEYFEKKEEKKE-EKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAI 121
+K E+ +Y E K+E E K LP L AEKGKVV RFAPNP+G LG+AR I
Sbjct: 60 VRK----ELIKKYSMDSEAKRELETKKLPELEGAEKGKVVMRFAPNPNGPPTLGSARGII 115
Query: 122 LSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYY 181
++ EYAKMY GK+I+RFDDTDP+ KRP YE +ED+EWLG KPDE++YAS R+ +YY
Sbjct: 116 VNGEYAKMYEGKYIIRFDDTDPRTKRPMIEAYEWYLEDIEWLGYKPDEVIYASRRIPIYY 175
Query: 182 KYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAV 241
YA +LI+MGKAY C C E+F++ RD G CPHR+ VE LE W +ML G+Y+EGE V
Sbjct: 176 DYARKLIEMGKAYTCFCSQEEFKKFRDSGEECPHRNISVEDTLEVWERMLEGDYEEGEVV 235
Query: 242 VRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRG 301
+RIKTD+ H +PA+RDW A RI+ +HP G+KY V+P +F SAI+DH LG+THI RG
Sbjct: 236 LRIKTDMRHKDPAIRDWVAFRII-KESHPLVGDKYVVYPTLDFESAIEDHLLGITHIIRG 294
Query: 302 QEHAENETRQRYIYEYFGWEYPVTVHHGRLSI-EGVILSKSKTRKGIEEGKYLGWDDPRL 360
++ ++E RQRYIYEYFGW YP+T H GR+ I E LS S +K IE GKY GWDDPRL
Sbjct: 295 KDLIDSERRQRYIYEYFGWIYPITKHWGRVKIFEFGKLSTSSIKKDIERGKYEGWDDPRL 354
Query: 361 GTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVP 420
T+RA RRRG PEAIK + +G+ ++D +VS NL A NRK++D ANRYFF+ PV
Sbjct: 355 PTLRAFRRRGFEPEAIKSFFLSLGVGENDVSVSLKNLYAENRKIIDRKANRYFFIWGPVK 414
Query: 421 MEVEGAPE-FIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNV 479
+E+ PE ++PL+P E+ R + IYV+KDD + LK G VRLKD NV
Sbjct: 415 IEIVNLPEKKEVELPLNPHTGEK----RRLKGERTIYVTKDDFERLK-GQVVRLKDFCNV 469
Query: 480 EIVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCE-VIIPEGDELIVRKGLLEKDA 538
+ E KA+F FE E +K K +IHW+PE + +I E + +GL+E++A
Sbjct: 470 LLDE-----KAEFMGFELEGVKKGK-NIIHWLPESEAIKGKVIGERE----AEGLVERNA 519
Query: 539 NVKAGEIVQFERFGFVRIDKIEGEKVVAIYAH 570
G++VQFERF F +++ + E++VA+Y H
Sbjct: 520 VRDVGKVVQFERFAFCKVESAD-EELVAVYTH 550
>sp|O26157|SYE_METTH GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437748|pir||B69167 glutamate--tRNA ligase (EC
6.1.1.17) - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621087|gb|AAB84558.1| (AE000797)
glutamyl-tRNA synthetase [Methanobacterium
thermoautotrophicum]
Length = 553
Score = 531 bits (1354), Expect = e-150
Identities = 280/573 (48%), Positives = 384/573 (66%), Gaps = 27/573 (4%)
Query: 3 VERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSLD 62
VE + +YAL+NA++H G+ANP AV+G V+ PELR A ++ + VE VNSLS +
Sbjct: 4 VEDLVYRYALLNAVKHRGRANPGAVMGAVMSNEPELRKMAPQVKEAVEAAVERVNSLSPE 63
Query: 63 EQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAIL 122
EQ+ ++ + E E+K++K+ KGL L KG+VV RFAPNP G H+G+ARAAIL
Sbjct: 64 EQQQEMERLGLEITERKQKKR---KGLRELAGV-KGEVVLRFAPNPSGPLHIGHARAAIL 119
Query: 123 SYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYK 182
++EYA+ Y G+ ILR +DTDP+ R +P Y+MI DLEWLG++ DE V SDR+E YY+
Sbjct: 120 NHEYARKYDGRLILRIEDTDPR--RVDPEAYDMIPADLEWLGVEWDETVIQSDRMETYYE 177
Query: 183 YAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVV 242
Y E+LI+ G AYVCTC+PE+FREL+++G C R L+RWR+M E KEG AVV
Sbjct: 178 YTEKLIERGGAYVCTCRPEEFRELKNRGEACHCRSLGFRENLQRWREMF--EMKEGSAVV 235
Query: 243 RIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQ 302
R+KTDLNHPNPA+RDW ++RIV+ HPR G +YRV+P+ NF+ A+DDH LGVTH+ RG+
Sbjct: 236 RVKTDLNHPNPAIRDWVSMRIVE-AEHPRTGTRYRVYPMMNFSVAVDDHLLGVTHVLRGK 294
Query: 303 EHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGT 362
+H N +Q Y+Y + GWE P +H+GRL ++ V LS S R+GI G+Y GWDDPRLGT
Sbjct: 295 DHLANREKQEYLYRHLGWEPPEFIHYGRLKMDDVALSTSGAREGILRGEYSGWDDPRLGT 354
Query: 363 IRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPME 422
+RA+ RRGI PEAI++L++E+G+K +D+T+SW + +NR +++ A RYFF ADPV +E
Sbjct: 355 LRAIARRGIRPEAIRKLMVEIGVKIADSTMSWKKIYGLNRSILEEEARRYFFAADPVKLE 414
Query: 423 VEGAPEFI-AKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEI 481
V G P + + PLHPDHPE G R L +Y+ DDL +RL D NV I
Sbjct: 415 VVGLPGPVRVERPLHPDHPEIGNRVLELR--GEVYLPGDDLG----EGPLRLIDAVNV-I 467
Query: 482 VEVGEKIKAKFHSFEYEIARKNKWRMIHWVP--EGRPCEVIIPEGDELIVRKGLLEKDAN 539
GE ++HS E AR+ MIHWVP EVI+P+ + +G++E DA+
Sbjct: 468 YSGGE---LRYHSEGIEEARELGASMIHWVPAESALEAEVIMPDASRV---RGVIEADAS 521
Query: 540 -VKAGEIVQFERFGFVRIDKIEGEKVVAIYAHK 571
++ ++VQ ERFGF R+D G +V YAHK
Sbjct: 522 ELEVDDVVQLERFGFARLDS-AGPGMVFYYAHK 553
>sp|Q9Y9H1|SYE_AERPE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437753|pir||A72459 probable glutamyl-tRNA
synthetase APE2317 - Aeropyrum pernix (strain K1)
>gi|5106018|dbj|BAA81329.1| (AP000064) 544aa long
hypothetical glutamyl-tRNA synthetase [Aeropyrum pernix]
Length = 544
Score = 472 bits (1201), Expect = e-132
Identities = 255/550 (46%), Positives = 351/550 (63%), Gaps = 18/550 (3%)
Query: 31 VLGENPELRSKAREIVPIINKVVEEVNSLSLDEQKAKLMEIYPEYFEKKEEKKEEKKGLP 90
+LG++PELRS+AREI + +VVE+VNS+ EQK L E YPE +E++++ KGLP
Sbjct: 4 LLGDHPELRSRAREIASLAARVVEQVNSMPAGEQKRLLSEQYPELARFEEQREKGDKGLP 63
Query: 91 PLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEP 150
PLP A +G+V RFAPNPD H+GNAR AI+++EYA+MY G+ +LRF+DTDP+ K P
Sbjct: 64 PLPGAVEGRVKLRFAPNPDFVIHMGNARPAIVNHEYARMYKGRMVLRFEDTDPRTKTPLR 123
Query: 151 IFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
Y++I +DL+WLG+ DE S R+E++Y A I+ G AYV C E +EL +G
Sbjct: 124 EAYDLIRQDLKWLGVSWDEEYIQSLRMEVFYSVARRAIERGCAYVDNCGREG-KELLSRG 182
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHP 270
CP RD E LE + KML GE+ EGEAVVR+KTD HPNP++RDW A+RI+D HP
Sbjct: 183 EYCPTRDLGPEDNLELFEKMLEGEFYEGEAVVRMKTDPRHPNPSLRDWVAMRIIDTEKHP 242
Query: 271 R--AGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHH 328
G++Y VWP YNFA ++DDH + +TH+ RG+EH N +Q +Y GW P +H
Sbjct: 243 HPLVGSRYLVWPTYNFAVSVDDHMMEITHVLRGKEHQLNTEKQLAVYRCMGWRPPYFIHF 302
Query: 329 GRLSIEGVILSKSKTRKGIEE--GKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLK 386
GRL +EG ILSKSK RK +EE G+++G+DDPR GTI LRRRG+L EAI+++I+EVG+K
Sbjct: 303 GRLKLEGFILSKSKIRKLLEERPGEFMGYDDPRFGTIAGLRRRGVLAEAIRQIILEVGVK 362
Query: 387 KSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEGAPE--FIAKIPLHPDHPERGT 444
+DAT+SW NLAA NRKL+D A+R +V DPV MEVE A A+IP HP P+R
Sbjct: 363 PTDATISWANLAAANRKLLDERADRIMYVEDPVEMEVELAQVECRAAEIPFHPSRPQRKR 422
Query: 445 RELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYEIARKNK 504
R T K + +D ++ G +RL L N + + ++ S EY AR+ K
Sbjct: 423 RITLCTGDKVLLTREDAVE----GRQLRLMGLSNFTVSQ--GILREVDPSLEY--ARRMK 474
Query: 505 WRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANVKAGEI---VQFERFGFVRIDKIEG 561
++ WV +G V + E EL +R+ + ++ + +QF R+GFVR+D +E
Sbjct: 475 LPIVQWVKKGGEASVEVLEPVELELRRHQGYAEDAIRGYGVDSRLQFVRYGFVRVDSVED 534
Query: 562 EKVVAIYAHK 571
IY HK
Sbjct: 535 GVYRVIYTHK 544
>emb|CAC12071.1| (AL445066) glutamyl-tRNA synthetase related protein [Thermoplasma
acidophilum]
Length = 550
Score = 448 bits (1141), Expect = e-125
Identities = 240/548 (43%), Positives = 339/548 (61%), Gaps = 23/548 (4%)
Query: 9 KYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSLDEQKAKL 68
+ ALINA +H GKA+ K+V+GKV+ E P+LR R +++++V+EVNS+S E + +
Sbjct: 10 RIALINAYQHEGKADLKSVMGKVMAEIPDLRRDPRSAREMVSRIVDEVNSMSAYEIRETV 69
Query: 69 MEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAK 128
Y K EKK E+ LP L + G VV R AP+P G H+G+ R AIL+ EY K
Sbjct: 70 ETRYTSSIRK--EKKVEEHRLPDL-EGVNGPVVMRMAPSPSGPLHIGHTRMAILNDEYVK 126
Query: 129 MYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELI 188
YGG+ ILR +DT+PK +P Y MI EDLEWLG+ +IV SDR +LYY A++L+
Sbjct: 127 RYGGELILRIEDTNPK--NIDPDAYHMIPEDLEWLGVNVTKIVIQSDRFDLYYAEAKKLM 184
Query: 189 KMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDL 248
+ G YVCTC E+F++ + + IPC RD P E LE + KM++G KEG+AV +KTDL
Sbjct: 185 ENGHMYVCTCPREEFKKRKLESIPCKDRDNPPETNLELFDKMIDGTIKEGDAVAVVKTDL 244
Query: 249 NHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENE 308
HPNP+VRDW A RI++ HPR +KYRV+P+ +F+ A+DDH LG+TH+ RG++ N
Sbjct: 245 KHPNPSVRDWIAFRIIE-ARHPRVDDKYRVYPMMSFSVAVDDHYLGLTHVLRGKDQLTNT 303
Query: 309 TRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRR 368
+QRYI++Y GW+ P H+G + G+ L S +KGI G+Y GW D RLGT+RA +
Sbjct: 304 DKQRYIFDYNGWKKPYYYHYGMIKFPGIKLKTSLMKKGILSGQYEGWSDIRLGTVRAFAK 363
Query: 369 RGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEGAPE 428
RG PE + I GL++ DA S + +INR++VDP A R+ FV DPVP+ +EG P
Sbjct: 364 RGYRPETFRRYWINSGLREIDAIFSIEIFDSINREIVDPRAYRFSFVKDPVPVRIEGMPN 423
Query: 429 FIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEKI 488
AK+PLHP HPE G RE + +Y++ D + G +RLKDL I
Sbjct: 424 ISAKLPLHPTHPEYGFRE--YEVKGSVYIASRDFAAISEGERIRLKDLC---------YI 472
Query: 489 KAKFHSFEYE-IARKNKWRMIHWVPEG-RPCEVIIPEGDELIVRKGLLEKDANVKAGEIV 546
+ K + Y+ + K ++I+W PEG R V+ P+G + GL+E ++ G I
Sbjct: 473 RKKGNGIIYDGVEMTEKTKIINWCPEGSRDFSVLKPDGSK---DSGLIEPKSSGYRG-IA 528
Query: 547 QFERFGFV 554
Q ER+G+V
Sbjct: 529 QLERYGYV 536
>gb|AAG19534.1| (AE005044) glutamyl-tRNA synthetase; GltS [Halobacterium sp. NRC-1]
Length = 586
Score = 420 bits (1067), Expect = e-116
Identities = 239/590 (40%), Positives = 346/590 (58%), Gaps = 35/590 (5%)
Query: 3 VERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSLD 62
V R A + AL NA++HG A A++G ++GE+P+ R+ EI +I V+E+VN +S D
Sbjct: 9 VRRAAERAALFNALKHGSDAQVGAIMGPMMGEHPDFRAHGDEIPGVIAPVIEDVNGMSDD 68
Query: 63 EQKAKLMEIYPEYFEKKEEKKE-EKKGLPPLPKAEK-GKVVTRFAPNPDGAFHLGNARAA 120
EQ+A+L E+ PE E+ + + E + LP LP AE +V R APNP+G +H+G+AR
Sbjct: 69 EQRARLAELAPEDVEELDSEDEGDDHALPALPNAEAYDEVRMRCAPNPNGPWHVGHARMP 128
Query: 121 ILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELY 180
+ Y + Y G F++RFDDTDP+ KRP+ Y+ I+EDL +LG + DE++ ASDR+E Y
Sbjct: 129 SVIGTYKQRYDGSFVVRFDDTDPETKRPDLDAYDQILEDLSYLGFEADEVLTASDRVETY 188
Query: 181 YKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA 240
Y++A LI MG AY C+C +F +L++ G CPHRD+ E + + M++GEY GE
Sbjct: 189 YEHARRLIGMGGAYTCSCPGAEFSDLKNSGEACPHRDKDPETVADEFEAMVDGEYNSGEM 248
Query: 241 VVRIKTDLNHPNPAVRDWPALRIVDNPNHPR-AGNKYRVWPLYNFASAIDDHELGVTHIF 299
V+R+KTD+ H NPA+RDW A R+VD P HPR A + YR WP+ +F S +DDH GVTHI
Sbjct: 249 VLRVKTDITHKNPALRDWVAFRMVDTP-HPRDAASGYRCWPMLDFQSGVDDHRTGVTHII 307
Query: 300 RGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEG--VILSKSKTRKGIEEGKYLGWDD 357
RG + ++ RQR++YEYFGWEYP VH G + ++ V +S S ++ I G+ GWDD
Sbjct: 308 RGIDLQDSAKRQRFLYEYFGWEYPEVVHWGHVQLDAYDVAMSTSTIKERIAAGELEGWDD 367
Query: 358 PRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVAD 417
PR T++++RRRGI A+ + ++E+G SD ++ + A NR LVD A R F V D
Sbjct: 368 PRAPTMQSIRRRGIRGAAVVDAMVELGTSSSDVELAMSAVYANNRDLVDDTAPRQFLVRD 427
Query: 418 PVPMEVEGAPEF--IAKIP-----------LHPDHPERGTRELRFTPGKPIYVSKDDLDL 464
EG E ++P +HP+HP+RG RE+ G+ + V DL
Sbjct: 428 GFEARGEGPEESHEAVEVPVDDGPDEATPQVHPEHPDRGDREI--PVGERVLVEATDLP- 484
Query: 465 LKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVII--P 522
G V LK V GE+ F + +I R+ ++ WVP +V +
Sbjct: 485 -AAGDRVWLKGYGPVRY--DGERF--AFLDADIDIVREEGVDVVQWVPAEHNVDVRLRTM 539
Query: 523 EGDEL-IVRKGLLEKDANVKAGEIVQFERFGFVRID-KIEGEKVVAIYAH 570
+GD G ++DA+ EIVQF R GF R+D +G VA + H
Sbjct: 540 DGDVTGYAEPGFADRDAD----EIVQFVRVGFARVDAHRDGGASVAYFTH 585
>gb|AAF97196.1|AF268611_20 (AF268611) glutamyl-tRNA synthetase [uncultured marine group II
euryarchaeote 37F11]
Length = 581
Score = 388 bits (985), Expect = e-106
Identities = 222/568 (39%), Positives = 330/568 (58%), Gaps = 32/568 (5%)
Query: 2 EVERIALKYALINAIEHGGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLS- 60
E + + +L NA E+ GK +VIG+++ +LR +I P++ + V + N+L+
Sbjct: 23 ETQNLIWHLSLQNAFEYDGKGAAGSVIGRIMSTRADLRQHGGQIGPLVAQSVAKANTLAQ 82
Query: 61 ---LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNA 117
+D ++ L P E ++ K+E ++GLPPL E ++V RFAPNP+G G+A
Sbjct: 83 ENGMDHVESLLQREAPHLLEGRQ-KQERREGLPPLKNTEGKEIVLRFAPNPNGPLSFGHA 141
Query: 118 RAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKP-DEIVYASDR 176
R +++ YA + G ILRFDDTD VK P Y++I +++EWL +P D IV ASDR
Sbjct: 142 RGVVINGTYAHEHKGTLILRFDDTDTTVKPPMLDAYDIIPKEVEWLLGRPADRIVLASDR 201
Query: 177 LELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYK 236
+ LYY +AE ++K G Y+C C E FR R+ CP RD+ VE+ E WR ML+G Y
Sbjct: 202 IPLYYDHAERMLKEGFGYICQCPAEDFRTFRETKENCPCRDKSVEMNAEGWRMMLDGSYN 261
Query: 237 EGEAVVRIKTDLNHPNPAVRDWPALRIVD---NPN-HPRAGNKYRVWPLYNFASAIDDHE 292
G+AVVR+KTD+ NPA+RDWPALRI D NP+ P+ G+ YRVWPL +F SA++D
Sbjct: 262 PGDAVVRVKTDMGLKNPALRDWPALRIQDTQKNPHPRPQIGSTYRVWPLLDFQSAVEDQL 321
Query: 293 LGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSI-EGVILSKSKTRKGIEEGK 351
GVTHI RG++ ++ +Q +YE+FGWEYP T++ GR+ + E S SK R IE G
Sbjct: 322 QGVTHIVRGKDLMDSTRKQTLLYEHFGWEYPETIYWGRVKVHEWGGFSTSKMRASIESGA 381
Query: 352 YLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANR 411
Y GWDDPRL T++ L+ RGI EA++ IE+G+ + D +V L + N K +D A R
Sbjct: 382 YTGWDDPRLPTLQGLQLRGIQAEALRNFWIELGVTQKDISVPLATLFSHNTKRIDDDAPR 441
Query: 412 YFFVADPVPMEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFV 471
FV +PV +++ G +IP+HP+H G R + + + I + K+D +
Sbjct: 442 LSFVRNPVEIDLHGDIPDHIEIPVHPNHESMGMRIISMSSNQ-ILIEKED----EKHPTY 496
Query: 472 RLKDLFNVEI-VEVGEKIKAKFHSFEYEIARKNKWRMIHWV--PEGRPCEVIIPEGDELI 528
RLK+ ++EI +VG I+R ++ +IHWV + + +P D +
Sbjct: 497 RLKEFADIEIGGQVG------------SISRSDRRPIIHWVSTDSSKEATLTLPLQDNIE 544
Query: 529 VRKGLLEKDANVKAGEIVQFERFGFVRI 556
+GL+E D G I+Q ER G+ I
Sbjct: 545 HIQGLVE-DHEYPVGTIIQLERIGYAII 571
>gi|11426207 glutamyl-prolyl tRNA synthetase [Homo sapiens]
Length = 1440
Score = 280 bits (709), Expect = 3e-74
Identities = 169/510 (33%), Positives = 259/510 (50%), Gaps = 38/510 (7%)
Query: 81 EKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDD 140
EKK++ LP AE GKV RF P G H+G+A+AA+L+ Y + GK I+RFDD
Sbjct: 107 EKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDD 166
Query: 141 TDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKP 200
T+P+ ++ + F ++I+ED+ L IKPD+ Y SD E KYAE+LI+ GKAYV
Sbjct: 167 TNPEKEKED--FEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPA 224
Query: 201 EKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPA 260
E+ + R++ I HR P+E L+ W +M G +R K D++ N +RD
Sbjct: 225 EQMKAEREQRIESKHRKNPIEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSNNGCMRDPTL 284
Query: 261 LRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGW 320
R P HPR GNKY V+P Y+FA I D GVTH R E+ + + + +I E G
Sbjct: 285 YRCKIQP-HPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGI 343
Query: 321 EYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELI 380
P + RL++ +LSK K + EG GWDDPR T+R + RRG+ E +K+ I
Sbjct: 344 RKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFI 403
Query: 381 IEVGLKKSDATVSWDNLAAINRKLVDPIANRY--FFVADPVPMEVEGAPEFIAKIPLHPD 438
G +S + WD + A N+K++DP+A RY + +P+ V A E + ++ HP
Sbjct: 404 AAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVIPVNVPEAQEEMKEVAKHPK 463
Query: 439 HPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYE 498
+PE G + + ++P +++ D + G V + N+ I ++ + K S + +
Sbjct: 464 NPEVGLKPVWYSP--KVFIEGADAETFSEGEMVTFINWGNLNITKIHKNADGKIISLDAK 521
Query: 499 IARKN----KWRMIHWVPE---GRPCEVIIPEGDELIVRKGLLEKD-------------- 537
+ +N K + W+ E P VI + LI K +L KD
Sbjct: 522 LNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLIT-KPVLGKDEDFKQYVNKNSKHE 580
Query: 538 ---------ANVKAGEIVQFERFGFVRIDK 558
++K G+I+Q +R GF D+
Sbjct: 581 ELMLGDPCLKDLKKGDIIQLQRRGFFICDQ 610
>gi|4758294 glutamyl-prolyl tRNA synthetase; glutamate tRNA ligase [Homo
sapiens] >gi|135104|sp|P07814|SYEP_HUMAN MULTIFUNCTIONAL
AMINOACYL-TRNA SYNTHETASE [INCLUDES: GLUTAMYL-TRNA
SYNTHETASE (GLUTAMATE--TRNA LIGASE); PROLYL-TRNA
SYNTHETASE (PROLINE--TRNA LIGASE)] >gi|68554|pir||SYHUQT
multifunctional aminoacyl-tRNA ligase - human
>gi|31958|emb|CAA38224.1| (X54326) glutaminyl-tRNA
synthetase [Homo sapiens]
Length = 1440
Score = 279 bits (707), Expect = 5e-74
Identities = 169/510 (33%), Positives = 258/510 (50%), Gaps = 38/510 (7%)
Query: 81 EKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDD 140
EKK++ LP AE GKV RF P G H+G+A+AA+L+ Y + GK I+RFDD
Sbjct: 107 EKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDD 166
Query: 141 TDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKP 200
T+P+ ++ + F ++I+ED+ L IKPD+ Y SD E KYAE+LI+ GKAYV
Sbjct: 167 TNPEKEKED--FEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPA 224
Query: 201 EKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPA 260
E+ + R++ I HR P+E L+ W +M G +R K D++ N +RD
Sbjct: 225 EQMKAEREQRIESKHRKNPIEKNLQMWEEMKKGSQFGHSCCLRAKIDMSSNNGCMRDPTL 284
Query: 261 LRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGW 320
R P HPR GNKY V+P Y+FA I D GVTH R E+ + + + +I E G
Sbjct: 285 YRCKIQP-HPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGI 343
Query: 321 EYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELI 380
P + RL++ +LSK K + EG GWDDPR T+R + RRG+ E +K+ I
Sbjct: 344 RKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFI 403
Query: 381 IEVGLKKSDATVSWDNLAAINRKLVDPIANRY--FFVADPVPMEVEGAPEFIAKIPLHPD 438
G +S + WD + A N+K++DP+A RY + +P+ V A E + ++ HP
Sbjct: 404 AAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVIPVNVPEAQEEMKEVAKHPK 463
Query: 439 HPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYE 498
+PE G + + ++P +++ D + G V + N+ I ++ + K S + +
Sbjct: 464 NPEVGLKPVWYSP--KVFIEGADAETFSEGEMVTFINWGNLNITKIHKNADGKIISLDAK 521
Query: 499 IARKN----KWRMIHWVPE---GRPCEVIIPEGDELIVRKGLLEKD-------------- 537
+N K + W+ E P VI + LI K +L KD
Sbjct: 522 FNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLIT-KPVLGKDEDFKQYVNKNSKHE 580
Query: 538 ---------ANVKAGEIVQFERFGFVRIDK 558
++K G+I+Q +R GF D+
Sbjct: 581 ELMLGDPCLKDLKKGDIIQLQRRGFFICDQ 610
>emb|CAA30354.1| (X07466) glutaminyl-tRNA synthetase [Homo sapiens]
Length = 792
Score = 269 bits (680), Expect = 7e-71
Identities = 145/393 (36%), Positives = 216/393 (54%), Gaps = 7/393 (1%)
Query: 81 EKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDD 140
EKK++ LP AE GKV RF P G H+G+A+AA+L+ Y + GK I+RFDD
Sbjct: 12 EKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDD 71
Query: 141 TDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKP 200
T+P+ ++ + F ++I+ED+ L IKPD+ Y SD E KYAE+LI+ GKAYV
Sbjct: 72 TNPEKEKED--FEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPA 129
Query: 201 EKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPA 260
E+ + R++ I HR P+E L+ W +M G +R K D++ N +RD
Sbjct: 130 EQMKAEREQRIESKHRKNPIEKNLQMWEEMKKGSQFGHSCCLRAKIDMSSNNGCMRDPTL 189
Query: 261 LRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGW 320
R P HPR GNKY V+P Y+FA I D GVTH R E+ + + + +I E G
Sbjct: 190 YRCKIQP-HPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGI 248
Query: 321 EYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELI 380
P + RL++ +LSK K + EG GWDDPRL T+R + RRG+ E +K+ I
Sbjct: 249 RKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRLPTVRGVLRRGMTVEGLKQFI 308
Query: 381 IEVGLKKSDATVSWDNLAAINRKLVDPIANRY--FFVADPVPMEVEGAPEFIAKIPLHPD 438
G +S + WD + A N+K++DP+A RY + +P+ V A E + ++ HP
Sbjct: 309 AAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVIPVNVPEAQEEMKEVAKHPK 368
Query: 439 HPERGTRELRFTPGKPIYVSKDDLDLLKPGSFV 471
+PE G + + ++P +++ D + G V
Sbjct: 369 NPEVGLKPVWYSP--KVFIEGADAETFSEGEMV 399
>gi|6324742 glutaminyl-tRNA synthetase; Gln4p [Saccharomyces cerevisiae]
>gi|2507436|sp|P13188|SYQ_YEAST GLUTAMINYL-TRNA
SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|2144556|pir||SYBYQT glutamine--tRNA ligase (EC
6.1.1.18) - yeast (Saccharomyces cerevisiae)
>gi|1293729|gb|AAB47415.1| (U55021) Gln4p [Saccharomyces
cerevisiae] >gi|1420413|emb|CAA99374.1| (Z75076) ORF
YOR168w [Saccharomyces cerevisiae]
Length = 809
Score = 260 bits (658), Expect = 3e-68
Identities = 153/418 (36%), Positives = 229/418 (54%), Gaps = 20/418 (4%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
GKV TRF P P+G H+G+++A ++++ YAK + G LRFDDT+P+ + PE ++E I
Sbjct: 250 GKVRTRFPPEPNGYLHIGHSKAIMVNFGYAKYHNGTCYLRFDDTNPEKEAPE--YFESIK 307
Query: 158 EDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKF---RELRDKGIP-- 212
+ WLG KP +I Y+SD + Y+ AE LIK GKAYVC C E+ R +++ G P
Sbjct: 308 RMVSWLGFKPWKITYSSDYFDELYRLAEVLIKNGKAYVCHCTAEEIKRGRGIKEDGTPGG 367
Query: 213 ----CPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPN 268
C HRD+ +E L+ +R M +G+YK GEA++R+K DLN P+P + D A R+++ P
Sbjct: 368 ERYACKHRDQSIEQNLQEFRDMRDGKYKPGEAILRMKQDLNSPSPQMWDLIAYRVLNAP- 426
Query: 269 HPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHH 328
HPR G K+R++P Y+F + D +TH E + ++ + P +
Sbjct: 427 HPRTGTKWRIYPTYDFTHCLVDSMENITHSLCTTEFYLSRESYEWLCDQVHVFRPAQREY 486
Query: 329 GRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKS 388
GRL+I G +LSK K + ++E GWDDPRL T+ A+RRRG+ P AI I +G+ S
Sbjct: 487 GRLNITGTVLSKRKIAQLVDEKFVRGWDDPRLFTLEAIRRRGVPPGAILSFINTLGVTTS 546
Query: 389 DATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEGAP---EFIAKIPLHPDHPERGTR 445
+ + RK ++ R FV DPV + V+ E +A IP P PE G R
Sbjct: 547 TTNIQVVRFESAVRKYLEDTTPRLMFVLDPVEVVVDNLSDDYEELATIPYRPGTPEFGER 606
Query: 446 ELRFTPGKPIYVSKDDL-DLLKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYEIARK 502
+ FT Y+ + D + + F RL V +++V + F S E + A K
Sbjct: 607 TVPFT--NKFYIERSDFSENVDDKEFFRLTPNQPVGLIKVSHTV--SFKSLEKDEAGK 660
>pir||S38809 glutamate--tRNA ligase (EC 6.1.1.17) - human (fragment)
Length = 368
Score = 257 bits (650), Expect = 2e-67
Identities = 138/359 (38%), Positives = 200/359 (55%), Gaps = 5/359 (1%)
Query: 81 EKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDD 140
EKK++ LP AE GKV RF P G H+G+A+AA+L+ Y + GK I+RFDD
Sbjct: 12 EKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDD 71
Query: 141 TDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKP 200
T+P+ ++ + F ++I+ED+ L IKPD+ Y SD E KYAE+LI+ GKAYV
Sbjct: 72 TNPEKEKED--FEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPA 129
Query: 201 EKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPA 260
E+ + R++ I HR P+E L+ W +M G +R K D++ N +RD
Sbjct: 130 EQMKAEREQRIESKHRKNPIEKNLQMWEEMKKGSQFGHSCCLRAKIDMSSNNGCMRDPTL 189
Query: 261 LRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGW 320
R P HPR GNKY V+P Y+FA I D GVTH R E+ + + + +I E G
Sbjct: 190 YRCKIQP-HPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGI 248
Query: 321 EYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELI 380
P + RL++ +LSK K + EG GWDDPRL T+R + RRG+ E +K+ I
Sbjct: 249 RKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRLPTVRGVLRRGMTVEGLKQFI 308
Query: 381 IEVGLKKSDATVSWDNLAAINRKLVDPIANRY--FFVADPVPMEVEGAPEFIAKIPLHP 437
G +S + WD + A N+K++DP+A RY + +P+ V A E + ++ HP
Sbjct: 309 AAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVIPVNVPEAQEEMKEVAKHP 367
>pir||T27567 hypothetical protein ZC434.5 - Caenorhabditis elegans
>gi|3925372|emb|CAB00060.1| (Z75714) contains similarity
to Pfam domain: PF00458 (WHEP-TRS domain containing
proteins), Score=246.0, E-value=2.3e-73, N=6; PF00749
(tRNA synthetases class I (E and Q)), Score=575.9,
E-value=8.1e-170, N=1~cDNA EST yk70c4.3 comes from this
gene~cDNA >
Length = 1149
Score = 256 bits (647), Expect = 5e-67
Identities = 162/515 (31%), Positives = 256/515 (49%), Gaps = 42/515 (8%)
Query: 79 KEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRF 138
KE+KK+E K + LP AEKGKVV RF P G H+G+A+AA+L+ Y + + G+ I+RF
Sbjct: 174 KEKKKDEGKFVE-LPGAEKGKVVVRFPPEASGYLHIGHAKAALLNQYYQQAFEGQLIMRF 232
Query: 139 DDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTC 198
DDT+P + F +I EDL L I PD ++SD E+ E+L+K GKA+V
Sbjct: 233 DDTNPAKENAH--FEHVIKEDLSMLNIVPDRWTHSSDHFEMLLTMCEKLLKEGKAFVDDT 290
Query: 199 KPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDW 258
E R R++ +R E L+ W +M G K VR+K D+ N A+RD
Sbjct: 291 DTETMRNEREQRQDSRNRSNTPEKNLQLWEEMKKGSPKGLTCCVRMKIDMKSNNGAMRD- 349
Query: 259 PALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYF 318
P + H R G KY+V+P Y+F I D GVTH R E+ + + + +I +
Sbjct: 350 PTIYRCKPEEHVRTGLKYKVYPTYDFTCPIVDSVEGVTHALRTTEYHDRDDQYYFICDAL 409
Query: 319 GWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKE 378
G P + RL++ ++SK K ++EG GWDDPRL T+R + RRG+ E +K+
Sbjct: 410 GLRRPHIWEYARLNMTNTVMSKRKLTWFVDEGHVEGWDDPRLPTVRGVMRRGLTVEGLKQ 469
Query: 379 LIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPME----VEGAPEFIAKIP 434
I+ G +S + WD + A N+K++DP+A RY + P+ + + + +
Sbjct: 470 FIVAQGGSRSVVMMEWDKIWAFNKKVIDPVAPRYTALDSTSPLVSIELTDSISDDTSNVS 529
Query: 435 LHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEK------- 487
LHP + E G++++ GK + + + D LK G V + N++I ++ +K
Sbjct: 530 LHPKNAEIGSKDVH--KGKKLLLEQVDAAALKEGEIVTFVNWGNIKIGKIEKKGAVITKI 587
Query: 488 -IKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKD--------- 537
+ + +Y+ K W G+ V+ + D I+ K ++ KD
Sbjct: 588 SATLQLDNTDYKKTTKVTWLGDVKAEAGKTIPVVTADYDH-IISKAIIGKDEDWKQFINF 646
Query: 538 --------------ANVKAGEIVQFERFGFVRIDK 558
NVK G+I+Q +R GF +D+
Sbjct: 647 DSVHYTKMVGEPAIKNVKKGDIIQIQRKGFYIVDQ 681
>pir||T37830 probable glutamate--tRNA ligase (EC 6.1.1.17) - fission yeast
(Schizosaccharomyces pombe) >gi|2370487|emb|CAB11515.1|
(Z98849) glutamyl-trna synthetase, cytoplasmic
[Schizosaccharomyces pombe]
Length = 716
Score = 254 bits (643), Expect = 2e-66
Identities = 170/533 (31%), Positives = 257/533 (47%), Gaps = 43/533 (8%)
Query: 61 LDEQKAKLMEIYPEYFEKKEEKKEEKKGLPP-----LPKAEKGKVVTRFAPNPDGAFHLG 115
+D Q A + + E F K +++K P LP A GKVVTRF P P G H+G
Sbjct: 165 MDSQNA--VSVTMEEFTKAVNISKKQKSSGPNYEIGLPDAIDGKVVTRFPPEPSGYLHIG 222
Query: 116 NARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASD 175
+A+AA+L+ +A Y GK I+RFDDT+P + E F + I+ED+ LGIKPD + Y SD
Sbjct: 223 HAKAALLNQYFANKYHGKLIVRFDDTNPSKENSE--FQDAILEDVALLGIKPDVVTYTSD 280
Query: 176 RLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEY 235
L+ ++Y ++IK G+AY E R R +GIP HRD P+E LE +M G
Sbjct: 281 YLDTIHQYCVDMIKSGQAYADDTDVETMRHERTEGIPSKHRDRPIEESLEILSEMDKGSD 340
Query: 236 KEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGV 295
+ +R K +PN A+RD P + + H R G KYR +P Y+FA I D GV
Sbjct: 341 VGLKNCIRAKISYENPNKAMRD-PVIYRCNLLPHHRTGTKYRAYPTYDFACPIVDSLEGV 399
Query: 296 THIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGW 355
TH R E+ + +++ + R++ +LSK K + ++ G GW
Sbjct: 400 THALRTTEYRDRNPLYQWMIKAMNLRKIHVWEFSRMNFVRTLLSKRKLTEIVDHGLVWGW 459
Query: 356 DDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFV 415
DDPR T+R +RRRG+ EA+++ I+ G K+ T+ W + A N+K++DP+A R+ V
Sbjct: 460 DDPRFPTVRGVRRRGMTIEALQQYIVSQGPSKNILTLDWTSFWATNKKIIDPVAPRHTAV 519
Query: 416 --ADPVPMEVEGAP--EFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFV 471
D V + P + P H +PE G ++ F I + + D K V
Sbjct: 520 ESGDVVKATIVNGPAAPYAEDRPRHKKNPELGNKKSIF--ANEILIEQADAQSFKQDEEV 577
Query: 472 RLKDLFNVEIVEVGEKIKAKFHSFEYEIAR----KNKWRMIHWVPEGR-PCEVIIPEGDE 526
L D N + E+ K S + E+ K + + W+ + V + + D
Sbjct: 578 TLMDWGNAYVREINRDASGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDY 637
Query: 527 LIVRKGLLEKD----------------------ANVKAGEIVQFERFGFVRID 557
LI + L E + N+K G+I+Q ER G+ +D
Sbjct: 638 LITKDKLEEGENYKDFLTPQTEFHSPVFADVGIKNLKKGDIIQVERKGYYIVD 690
>gb|AAF56211.1| (AE003745) Aats-glupro gene product [Drosophila melanogaster]
Length = 1714
Score = 254 bits (643), Expect = 2e-66
Identities = 171/545 (31%), Positives = 261/545 (47%), Gaps = 44/545 (8%)
Query: 47 PIINKVVEEVNSLSLDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAP 106
P+I KV++ SL D + + + E K +++++ LP AE GKVV RF P
Sbjct: 154 PLIQKVLQ---SLPEDAKVKRSPQSSKEQTPAKTGERKQEGKFVDLPGAEMGKVVVRFPP 210
Query: 107 NPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIK 166
G H+G+A+AA+L+ YA + G I+RFDDT+P + E F +I+ DLE L IK
Sbjct: 211 EASGYLHIGHAKAALLNQYYALAFQGTLIMRFDDTNPAKETVE--FENVILGDLEQLQIK 268
Query: 167 PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLER 226
PD + S+ +L Y LIK KAYV PE+ + R++ + +R VE L
Sbjct: 269 PDVFTHTSNYFDLMLDYCVRLIKESKAYVDDTPPEQMKLEREQRVESANRSNSVEKNLSL 328
Query: 227 WRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFAS 286
W +M+ G K + VR K D++ PN +RD P + N HPR G KY+V+P Y+FA
Sbjct: 329 WEEMVKGSEKGQKYCVRAKIDMSSPNGCMRD-PTIYRCKNEPHPRTGTKYKVYPTYDFAC 387
Query: 287 AIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKG 346
I D VTH R E+ + + + + + P + RL++ +LSK K
Sbjct: 388 PIVDAIENVTHTLRTTEYHDRDDQFYWFIDALKLRKPYIWSYSRLNMTNTVLSKRKLTWF 447
Query: 347 IEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVD 406
++ G GWDDPR T+R + RRG+ E +KE II G KS ++WD + A N+K++D
Sbjct: 448 VDSGLVDGWDDPRFPTVRGIIRRGMTVEGLKEFIIAQGSSKSVVFMNWDKIWAFNKKVID 507
Query: 407 PIANRYFFVADP--VPMEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDL 464
PIA RY + V + V GA ++ +HP G + + G IY+ D +
Sbjct: 508 PIAPRYTALEKEKRVIVNVAGAKVERIQVSVHPKDESLGKKTVLL--GPRIYIDYVDAEA 565
Query: 465 LKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYEIARKNK---------WRMIHWVPEGR 515
LK G + N+ I +V + S + + +NK W + P
Sbjct: 566 LKEGENATFINWGNILIRKVNKDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAY 625
Query: 516 PCEVIIPEGDELIVRKGLLEKDAN-----------------------VKAGEIVQFERFG 552
P + + I+ K +L KD + K G+I+Q +R G
Sbjct: 626 PPTFCVYFDN--IISKAVLGKDEDFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRG 683
Query: 553 FVRID 557
F ++D
Sbjct: 684 FFKVD 688
>sp|P28668|SYEP_DROME MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE [INCLUDES: GLUTAMYL-TRNA
SYNTHETASE (GLUTAMATE--TRNA LIGASE); PROLYL-TRNA
SYNTHETASE (PROLINE--TRNA LIGASE)]
>gi|103253|pir||S18644 multifunctional amino acid--tRNA
ligase (EC 6.1.1.-) - fruit fly (Drosophila
melanogaster) >gi|157564|gb|AAA28594.1| (M74104)
transfer RNA-Glu-Pro aminoacyl synthetase [Drosophila
melanogaster] >gi|1871360|gb|AAC47469.1| (U59923)
glutamyl-prolyl-tRNA synthetase [Drosophila
melanogaster]
Length = 1714
Score = 250 bits (632), Expect = 3e-65
Identities = 169/545 (31%), Positives = 258/545 (47%), Gaps = 44/545 (8%)
Query: 47 PIINKVVEEVNSLSLDEQKAKLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAP 106
P+I KV++ SL D + + + E K +++++ LP AE GKVV RF P
Sbjct: 154 PLIQKVLQ---SLPEDAKVKRSPQSSKEQTPAKTGERKQEGKFVDLPGAEMGKVVVRFPP 210
Query: 107 NPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIK 166
G H+G+A+AA+L+ YA + G I+RFDDT+P + E F +I+ DLE L IK
Sbjct: 211 EASGYLHIGHAKAALLNQYYALVCQGTLIMRFDDTNPAKETVE--FENVILGDLEQLQIK 268
Query: 167 PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLER 226
PD + S+ +L Y LIK KAYV PE+ + R++ + +R VE L
Sbjct: 269 PDVFTHTSNYFDLMLDYCVRLIKESKAYVDDTPPEQMKLEREQRVESANRSNSVEKNLSL 328
Query: 227 WRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFAS 286
W +M+ G K K D++ PN +RD P + N HPR G KY+V+P Y+FA
Sbjct: 329 WEEMVKGSEKGQNTACAAKIDMSSPNGCMRD-PTIYRCKNEPHPRTGTKYKVYPTYDFAC 387
Query: 287 AIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKG 346
I D VTH R E+ + + + + + P + RL++ +LSK K
Sbjct: 388 PIVDAIENVTHTLRTTEYHDRDDQFYWFIDALKLRKPYIWSYSRLNMTNTVLSKRKLTWF 447
Query: 347 IEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVD 406
++ G GWDDPR T+R + RRG+ E +KE II G KS ++WD + A N+K++D
Sbjct: 448 VDSGLVDGWDDPRFPTVRGIIRRGMTVEGLKEFIIAQGSSKSVVFMNWDKIWAFNKKVID 507
Query: 407 PIANRYFFVADP--VPMEVEGAPEFIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDL 464
PIA RY + V + V GA ++ +HP G + + G IY+ D +
Sbjct: 508 PIAPRYTALEKEKRVIVNVAGAKVERIQVSVHPKDESLGKKTVLL--GPRIYIDYVDAEA 565
Query: 465 LKPGSFVRLKDLFNVEIVEVGEKIKAKFHSFEYEIARKNK---------WRMIHWVPEGR 515
LK G + N+ I +V + S + + +NK W + P
Sbjct: 566 LKEGENATFINWGNILIKKVNKDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAY 625
Query: 516 PCEVIIPEGDELIVRKGLLEKDAN-----------------------VKAGEIVQFERFG 552
P + + I+ K +L KD + K G+I+Q +R G
Sbjct: 626 PPTFCVYFDN--IISKAVLGKDEDFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRG 683
Query: 553 FVRID 557
F ++D
Sbjct: 684 FFKVD 688
>dbj|BAA90375.1| (AP001081) Similar to glutamyl-tRNA synthetase (AF067773) [Oryza
sativa]
Length = 715
Score = 246 bits (622), Expect = 4e-64
Identities = 169/527 (32%), Positives = 256/527 (48%), Gaps = 41/527 (7%)
Query: 79 KEEKKEEKKGLP----PLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKF 134
KE+ + K+ + LP A+ G+V RFAP P G H+G+A+A +L+ +A+ Y G+
Sbjct: 183 KEKLPDSKQNISIPEVDLPGAKVGEVCVRFAPEPSGYLHIGHAKAGLLNKYFAERYKGRL 242
Query: 135 ILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAY 194
I+RFDDT+P + E F E +++D+E LGIK D + Y SD + AE LIK GKAY
Sbjct: 243 IVRFDDTNPSKESNE--FVENVLKDVETLGIKYDIVTYTSDYFPQLMEMAENLIKQGKAY 300
Query: 195 VCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPA 254
V E+ R R G+ R+ V+ L W++M+NG + + VR K D+ PN +
Sbjct: 301 VDDTPKEQMRSERMDGVESKCRNNTVQDNLSLWKEMINGTERGMQCCVRGKLDMQDPNKS 360
Query: 255 VRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYI 314
+RD R +P+H R G+KY+V+P Y+FA D GVTH R E+ + + I
Sbjct: 361 LRDPVYYRCNTDPHH-RIGSKYKVYPTYDFACPFVDALEGVTHALRSSEYHDRNAQYYRI 419
Query: 315 YEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPE 374
+ G RL++ +LSK K ++ K W DPR T++ + RRG+ E
Sbjct: 420 LQEMGLRRVEIYEFSRLNMVYTVLSKRKLLWFVQNKKVEDWTDPRFPTVQGIVRRGLKVE 479
Query: 375 AIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVA--DPVPMEVEGAPE--FI 430
A+ + I+E G K+ + WD L IN+K++DP+ R+ V V + PE FI
Sbjct: 480 ALVQFILEQGASKNLNLMEWDKLWTINKKIIDPVCGRHTAVLKDQRVLFTLTNGPEEPFI 539
Query: 431 AKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEK--- 487
+P H + G + FT I++ D ++ G V L D N I E+ +
Sbjct: 540 RVLPRHKKYEGAGKKATTFT--NKIWLESADASVISIGEEVTLMDWGNAIIKEIKTQNGI 597
Query: 488 IKAKFHSFEYEIARKNKWRMIHWVPEGRP-CEVIIPEGDELIVRKGLLEKD--------- 537
I E + K + W+P+ + + E D LI +K L E D
Sbjct: 598 ITELLGELHLEGSVKMTKLKLTWLPDIEDLVSLSLVEFDYLIKKKKLEEDDNFLDNLNPC 657
Query: 538 -------------ANVKAGEIVQFERFGFVRIDK--IEGEKVVAIYA 569
N+K GEI+Q ER G+ R D I K + ++A
Sbjct: 658 TCQEFPALGDANMRNLKQGEIIQLERKGYYRCDAPFIRSSKPIVLFA 704
>gb|AAA78905.1| (U32265) cytosolic glutamyl-tRNA synthetase [Saccharomyces
cerevisiae]
Length = 743
Score = 242 bits (611), Expect = 9e-63
Identities = 160/497 (32%), Positives = 257/497 (51%), Gaps = 36/497 (7%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
LP A+ G+VVTRF P+P G H+G+A+AA+L+ +A+ Y GK I+RFDDT+P ++ E
Sbjct: 210 LPDAKMGEVVTRFPPDPSGYLHIGHAKAALLNQYFAQAYKGKLIIRFDDTNPSKEKEE-- 267
Query: 152 FYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGI 211
F + I+EDL+ LGIK D I Y+SD + Y Y ++IK GKAY EK RE R G+
Sbjct: 268 FQDSILEDLDLLGIKGDRITYSSDYFQEMYDYCVQMIKDGKAYCDDTPTEKMREERMDGV 327
Query: 212 PCPHRDEPVEVQLERWRKMLNGEYKEG-EAVVRIKTDLNHPNPAVRDWPALRIVDNPNHP 270
RD VE L + + + +EG + VR K D N +RD R P+H
Sbjct: 328 ASARRDRSVEENLRIFTEEMKNGTEEGLKNCVRAKIDYKALNKTLRDPVIYRCNLTPHH- 386
Query: 271 RAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGR 330
R G+ ++++P Y+F I D GVTH R E+ + + ++ + R
Sbjct: 387 RTGSTWKIYPTYDFCVPIVDAIEGVTHALRTIEYRDRNAQYDWMLQALRLRKVHIWDFAR 446
Query: 331 LSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDA 390
++ +LSK K + +++ WDDPR T+R +RRRG+ E ++ ++ G ++
Sbjct: 447 INFVRTLLSKRKLQWMVDKDLVGNWDDPRFPTVRGVRRRGMTAEGLRNFVLSQGPSRNVI 506
Query: 391 TVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEG--APE--FIAKIPLHPDHPERGTRE 446
+ W+ + A N+K++DPIA+R+ + +PV + +EG AP+ I P H +P G ++
Sbjct: 507 NLEWNLIWAFNKKVIDPIASRHTAIVNPVKIHLEGSEAPQEPKIEMKPKHKKNPAMGEKK 566
Query: 447 LRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGE--KIKAKFHSFEYEIARKNK 504
+ + K I V KDD D++ V L D NV I + + + AK + E + +K K
Sbjct: 567 VIYY--KDIVVDKDDADVINVDEEVTLMDWGNVIITKKNDDGSMVAKL-NLEGDF-KKTK 622
Query: 505 WRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDA----------------------NVKA 542
++ V + + D LI + L E ++ ++K
Sbjct: 623 HKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTDAIADLNVKDMKI 682
Query: 543 GEIVQFERFGFVRIDKI 559
G+I+QFER G+ R+D +
Sbjct: 683 GDIIQFERKGYYRLDAL 699
>sp|Q9Y7Y8|SYQ_SCHPO PROBABLE GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE)
(GLNRS) >gi|7492598|pir||T40275 probable glutaminyl-trna
synthetase - fission yeast (Schizosaccharomyces pombe)
>gi|5441789|emb|CAB46772.1| (AL096809) probable
glutaminyl-trna synthetase [Schizosaccharomyces pombe]
Length = 811
Score = 240 bits (606), Expect = 3e-62
Identities = 155/473 (32%), Positives = 243/473 (50%), Gaps = 35/473 (7%)
Query: 19 GGKANPKAVIGKVLGENPELRSKAREIVPIINKVVEEVNSLSLDEQK-----AKLMEIYP 73
G K A GK G +KA+ N + V+S EQK +K ++
Sbjct: 184 GPKTEQDAAAGKKKG------AKAK------NSKQKTVDSGKAKEQKIVSEQSKKYNMFE 231
Query: 74 EYFEKKEEKKEEKKGLPPLPKAEK-----GKVVTRFAPNPDGAFHLGNARAAILSYEYAK 128
E F K K L P E G VVTRF P P+G H+G+++A +++ +A+
Sbjct: 232 EGFLAKLHKPGGNTQLIPERMKEHLQATGGGVVTRFPPEPNGYLHIGHSKAIAVNFGFAR 291
Query: 129 MYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELI 188
+ G LRFDDT+P+ + E ++E I + + WLG +P +I Y+SD + Y+ AEELI
Sbjct: 292 YHNGVCYLRFDDTNPEAE--EERYFESIKDLVAWLGFQPYKITYSSDYFDKLYELAEELI 349
Query: 189 KMGKAYVCTCKPEKFRELR---DKG--IPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVR 243
K KAYVC C + ++ R ++G C HRD P+E L +R M +G+Y+ EA++R
Sbjct: 350 KRDKAYVCHCTDAEIKKARGGEERGPRYACVHRDRPIEESLLEFRNMRDGKYQPKEAILR 409
Query: 244 IKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQE 303
+K DL+ NP + D A R++++P HPR G+K++++P Y+F + D ++H E
Sbjct: 410 MKQDLSDGNPQMWDLIAYRVLNSP-HPRTGDKWKIYPTYDFTHCLVDSFENISHSLCTTE 468
Query: 304 HAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTI 363
+ ++ P +GRL++ G ++SK K K ++EG GW+DPRL T+
Sbjct: 469 FILSRVSYEWLCNALEVYCPAQREYGRLNVVGTLMSKRKIMKLVKEGYVHGWNDPRLYTL 528
Query: 364 RALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEV 423
ALRRRG+ P AI E + EVG+ + + + RK ++ R F+ DP+ + +
Sbjct: 529 VALRRRGVPPGAILEFVSEVGVTTAVSNIEVARFENCVRKFLENSVPRLMFLPDPIKVTL 588
Query: 424 EGAPEFI---AKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRL 473
E + +IP +P P G+R T K IY+ + D F RL
Sbjct: 589 ENLDDSYREQIEIPFNPKDPSMGSRSAFLT--KHIYIDRSDFREEASSDFFRL 639
>gi|6321192 Ygl245wp [Saccharomyces cerevisiae]
>gi|1711626|sp|P46655|SYEC_YEAST GLUTAMYL-TRNA
SYNTHETASE, CYTOPLASMIC (GLUTAMATE--TRNA LIGASE) (GLURS)
(P85) >gi|1077168|pir||S53934 glutamate--tRNA ligase (EC
6.1.1.17) - yeast (Saccharomyces cerevisiae)
>gi|793866|emb|CAA89009.1| (Z49149) 44.6% identity in
656 aa ov with human glutaminyl-tRNA synthetase
[Saccharomyces cerevisiae] >gi|1322915|emb|CAA96964.1|
(Z72767) ORF YGL245w [Saccharomyces cerevisiae]
>gi|1589346|prf||2210407A HRB724 gene [Saccharomyces
cerevisiae]
Length = 724
Score = 239 bits (604), Expect = 6e-62
Identities = 160/497 (32%), Positives = 255/497 (51%), Gaps = 36/497 (7%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
LP A+ G+VVTRF P P G H+G+A+AA+L+ +A+ Y GK I+RFDDT+P ++ E
Sbjct: 210 LPDAKMGEVVTRFPPEPSGYLHIGHAKAALLNQYFAQAYKGKLIIRFDDTNPSKEKEE-- 267
Query: 152 FYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGI 211
F + I+EDL+ LGIK D I Y+SD + Y Y ++IK GKAY EK RE R G+
Sbjct: 268 FQDSILEDLDLLGIKGDRITYSSDYFQEMYDYCVQMIKDGKAYCDDTPTEKMREERMDGV 327
Query: 212 PCPHRDEPVEVQLERWRKMLNGEYKEG-EAVVRIKTDLNHPNPAVRDWPALRIVDNPNHP 270
RD VE L + + + +EG + VR K D N +RD R P+H
Sbjct: 328 ASARRDRSVEENLRIFTEEMKNGTEEGLKNCVRAKIDYKALNKTLRDPVIYRCNLTPHH- 386
Query: 271 RAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGR 330
R G+ ++++P Y+F I D GVTH R E+ + + ++ + R
Sbjct: 387 RTGSTWKIYPTYDFCVPIVDAIEGVTHALRTIEYRDRNAQYDWMLQALRLRKVHIWDFAR 446
Query: 331 LSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDA 390
++ +LSK K + +++ WDDPR T+R +RRRG+ E ++ ++ G ++
Sbjct: 447 INFVRTLLSKRKLQWMVDKDLVGNWDDPRFPTVRGVRRRGMTVEGLRNFVLSQGPSRNVI 506
Query: 391 TVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEG--APE--FIAKIPLHPDHPERGTRE 446
+ W+ + A N+K++DPIA R+ + +PV + +EG AP+ I P H +P G ++
Sbjct: 507 NLEWNLIWAFNKKVIDPIAPRHTAIVNPVKIHLEGSEAPQEPKIEMKPKHKKNPAVGEKK 566
Query: 447 LRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGE--KIKAKFHSFEYEIARKNK 504
+ + K I V KDD D++ V L D NV I + + + AK + E + +K K
Sbjct: 567 VIYY--KDIVVDKDDADVINVDEEVTLMDWGNVIITKKNDDGSMVAKL-NLEGDF-KKTK 622
Query: 505 WRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDA----------------------NVKA 542
++ V + + D LI + L E ++ ++K
Sbjct: 623 HKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTDAIADLNVKDMKI 682
Query: 543 GEIVQFERFGFVRIDKI 559
G+I+QFER G+ R+D +
Sbjct: 683 GDIIQFERKGYYRLDAL 699
>pir||T01200 probable glutamate--tRNA ligase (EC 6.1.1.17) F21E10.12 -
Arabidopsis thaliana >gi|3047084|gb|AAC13597.1|
(AF058914) similar to aminoacyl-tRNA synthetases
[Arabidopsis thaliana]
Length = 728
Score = 239 bits (604), Expect = 6e-62
Identities = 158/520 (30%), Positives = 261/520 (49%), Gaps = 40/520 (7%)
Query: 85 EKKGLPP--LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTD 142
+ KG P LP+AE GKV RFAP P G H+G+A+AA+L+ +A+ Y G+ I+RFDDT+
Sbjct: 206 QDKGKPEVDLPEAEIGKVKLRFAPEPSGYLHIGHAKAALLNKYFAERYQGEVIVRFDDTN 265
Query: 143 PKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEK 202
P + E F + +++D+ LGIK +++ Y SD AE+L++ GKAYV E+
Sbjct: 266 PAKESNE--FVDNLVKDIGTLGIKYEKVTYTSDYFPELMDMAEKLMREGKAYVDDTPREQ 323
Query: 203 FRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALR 262
++ R GI R+ VE L+ W++M+ G + + VR K ++ PN A+RD P
Sbjct: 324 MQKERMDGIDSKCRNHSVEENLKLWKEMIAGSERGLQCCVRGKFNMQDPNKAMRD-PVYY 382
Query: 263 IVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY 322
+ +H R G+KY+++P Y+FA D G+TH R E+ + + + E G
Sbjct: 383 RCNPMSHHRIGDKYKIYPTYDFACPFVDSLEGITHALRSSEYHDRNAQYFKVLEDMGLRQ 442
Query: 323 PVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIE 382
RL++ +LSK K ++ G GWDDPR T++ + RRG+ EA+ + I+E
Sbjct: 443 VQLYEFSRLNLVFTLLSKRKLLWFVQTGLVDGWDDPRFPTVQGIVRRGLKIEALIQFILE 502
Query: 383 VGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADP--VPMEVEGAPE--FIAKIPLHPD 438
G K+ + WD L +IN++++DP+ R+ V V + P+ F+ IP H
Sbjct: 503 QGASKNLNLMEWDKLWSINKRIIDPVCPRHTAVVAERRVLFTLTDGPDEPFVRMIPKHKK 562
Query: 439 HPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
G + FT K I++ + D + G V L D N + E+ + ++ A
Sbjct: 563 FEGAGEKATTFT--KSIWLEEADASAISVGEEVTLMDWGNAIVKEITKDEEGRVTALSGV 620
Query: 495 FEYEIARKNKWRMIHWVPE-GRPCEVIIPEGDELIVRKGLLEKD---------------- 537
+ + K + W+P+ + + E D LI +K L + D
Sbjct: 621 LNLQGSVKTTKLKLTWLPDTNELVNLTLTEFDYLITKKKLEDDDEVADFVNPNTKKETLA 680
Query: 538 ------ANVKAGEIVQFERFGFVRIDK--IEGEKVVAIYA 569
N+K G+++Q ER G+ R D ++ K + +++
Sbjct: 681 LGDSNMRNLKCGDVIQLERKGYFRCDVPFVKSSKPIVLFS 720
>gb|AAC36469.1| (AF067773) glutamyl-tRNA synthetase [Arabidopsis thaliana]
Length = 719
Score = 239 bits (604), Expect = 6e-62
Identities = 158/520 (30%), Positives = 261/520 (49%), Gaps = 40/520 (7%)
Query: 85 EKKGLPP--LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTD 142
+ KG P LP+AE GKV RFAP P G H+G+A+AA+L+ +A+ Y G+ I+RFDDT+
Sbjct: 197 QDKGKPEVDLPEAEIGKVKLRFAPEPSGYLHIGHAKAALLNKYFAERYQGEVIVRFDDTN 256
Query: 143 PKVKRPEPIFYEMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEK 202
P + E F + +++D+ LGIK +++ Y SD AE+L++ GKAYV E+
Sbjct: 257 PAKESNE--FVDNLVKDIGTLGIKYEKVTYTSDYFPELMDMAEKLMREGKAYVDDTPREQ 314
Query: 203 FRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALR 262
++ R GI R+ VE L+ W++M+ G + + VR K ++ PN A+RD P
Sbjct: 315 MQKERMDGIDSKCRNHSVEENLKLWKEMIAGSERGLQCCVRGKFNMQDPNKAMRD-PVYY 373
Query: 263 IVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY 322
+ +H R G+KY+++P Y+FA D G+TH R E+ + + + E G
Sbjct: 374 RCNPMSHHRIGDKYKIYPTYDFACPFVDSLEGITHALRSSEYHDRNAQYFKVLEDMGLRQ 433
Query: 323 PVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIE 382
RL++ +LSK K ++ G GWDDPR T++ + RRG+ EA+ + I+E
Sbjct: 434 VQLYEFSRLNLVFTLLSKRKLLWFVQTGLVDGWDDPRFPTVQGIVRRGLKIEALIQFILE 493
Query: 383 VGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADP--VPMEVEGAPE--FIAKIPLHPD 438
G K+ + WD L +IN++++DP+ R+ V V + P+ F+ IP H
Sbjct: 494 QGASKNLNLMEWDKLWSINKRIIDPVCPRHTAVVAERRVLFTLTDGPDEPFVRMIPKHKK 553
Query: 439 HPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
G + FT K I++ + D + G V L D N + E+ + ++ A
Sbjct: 554 FEGAGEKATTFT--KSIWLEEADASAISVGEEVTLMDWGNAIVKEITKDEEGRVTALSGV 611
Query: 495 FEYEIARKNKWRMIHWVPE-GRPCEVIIPEGDELIVRKGLLEKD---------------- 537
+ + K + W+P+ + + E D LI +K L + D
Sbjct: 612 LNLQGSVKTTKLKLTWLPDTNELVNLTLTEFDYLITKKKLEDDDEVADFVNPNTKKETLA 671
Query: 538 ------ANVKAGEIVQFERFGFVRIDK--IEGEKVVAIYA 569
N+K G+++Q ER G+ R D ++ K + +++
Sbjct: 672 LGDSNMRNLKCGDVIQLERKGYFRCDVPFVKSSKPIVLFS 711
>sp|P56926|SYQ_DEIRA GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|7471954|pir||A75253 glutaminyl-tRNA synthetase -
Deinococcus radiodurans (strain R1)
>gi|6460439|gb|AAF12148.1|AE002090_4 (AE002090)
glutaminyl-tRNA synthetase [Deinococcus radiodurans]
Length = 852
Score = 230 bits (581), Expect = 3e-59
Identities = 142/404 (35%), Positives = 212/404 (52%), Gaps = 37/404 (9%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
+VVTRF P+P G HLG+ A++L + A+ YGG+F LR DDT+P++ R E + + I +
Sbjct: 67 RVVTRFPPDPSGYAHLGHVFASLLDFNTARQYGGQFNLRMDDTNPELARQE--YVDSIAD 124
Query: 159 DLEWLGIKPDE-IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK----GIPC 213
DL+WLG+ E YASD + YY YAE+LI+ G AYV + PE+ LR G P
Sbjct: 125 DLKWLGLDWGEHFYYASDYFDRYYAYAEQLIRQGDAYVESVSPEELSRLRGNATTPGTPS 184
Query: 214 PHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAG 273
P+RD VE L+ R+M GE+ +GE V+R K DL PN +RD RIV+ P H R
Sbjct: 185 PYRDRSVEENLDLLRRMKAGEFADGEHVLRAKIDLTAPNMKLRDPVLYRIVNKP-HFRTS 243
Query: 274 NKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWE-YPVTVHHGRLS 332
+++ ++P Y+F + D GVTH E +N ++ E ++ P GR
Sbjct: 244 DEWHIYPAYDFEHPLQDAIEGVTHSMCSLEFVDNRAIYDWLMEKLNFDPRPHQYEFGRRG 303
Query: 333 IEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATV 392
+E I SK K R+ ++ G+ GWDDPR+ T+RA RR G+ PEA++ ++G+ +++ TV
Sbjct: 304 LEYTITSKRKLRELVQAGRVSGWDDPRMPTLRAQRRLGVTPEAVRAFAAQIGVSRTNRTV 363
Query: 393 SWDNLAAINRKLVDPI---ANRYFFVADPVPMEVEGAP-EFIAKIPLHPDH--------- 439
++A + D + A R V DPV + + E +P P
Sbjct: 364 ---DIAVYENAVRDDLNHRAPRVMAVLDPVKVTLTNLDGEKTLSLPYWPHDVVRDSPDGL 420
Query: 440 ----------PERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRL 473
PE R++ T + +Y+ +DD P F RL
Sbjct: 421 VGMPGGGRVAPEEAVRDVPLT--RELYIERDDFSPAPPKGFKRL 462
>sp|P43831|SYQ_HAEIN GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|1074144|pir||G64118 glutamine--tRNA ligase (EC
6.1.1.18) - Haemophilus influenzae (strain Rd KW20)
>gi|1574816|gb|AAC23001.1| (U32814) glutaminyl-tRNA
synthetase (glnS) [Haemophilus influenzae Rd]
Length = 557
Score = 229 bits (577), Expect = 8e-59
Identities = 165/514 (32%), Positives = 254/514 (49%), Gaps = 53/514 (10%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
L + V TRF P P+G H+G+A++ L++ AK Y G LRFDDT+P + E
Sbjct: 28 LASGKHKSVHTRFPPEPNGYLHIGHAKSICLNFGLAKEYQGLCNLRFDDTNPVKEDVE-- 85
Query: 152 FYEMIIEDLEWLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR--- 207
+ + I D+EWLG K + E YASD + Y YA ELIK G AYV P++ RE R
Sbjct: 86 YVDSIKADVEWLGFKWEGEPRYASDYFDALYGYAVELIKKGLAYVDELSPDEMREYRGTL 145
Query: 208 -DKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDN 266
+ G P+RD +E L + KM NGE+ EG+A +R K D+ P +R+ P + +
Sbjct: 146 TEPGKNSPYRDRTIEENLALFEKMKNGEFAEGKASLRAKIDMASPFMVMRE-PVIYRIKF 204
Query: 267 PNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTV 326
+H + G+K+ ++P+Y+F I D +TH E +N ++ E E P+
Sbjct: 205 SSHHQTGDKWCIYPMYDFTHCISDAIERITHSICTLEFQDNRRLYDWVLENISIERPLPH 264
Query: 327 HH--GRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVG 384
+ RL++EG + SK K K + + GW+DPR+ TI LRRRG P +++E +G
Sbjct: 265 QYEFSRLNLEGTLTSKRKLLKLVNDEIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIG 324
Query: 385 LKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEG-APEFIAKIPLHPDHPERG 443
+ K D V + L A R+ ++ A R V DPV + +E E + P HP+ PE G
Sbjct: 325 VTKQDNVVEYSALEACIREDLNENAPRAMAVIDPVRVVIENFESEAVLTAPNHPNRPELG 384
Query: 444 TRELRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAK 491
R+L FT K +Y+ + D L G VRL++ + ++ V + +I
Sbjct: 385 ERQLPFT--KELYIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDANGEITTI 442
Query: 492 FHSFEYEIARKNK------WRMIHWVP--EGRPCEV-------------------IIPEG 524
F +++ E KN +IHWV P E +
Sbjct: 443 FCTYDPETLGKNPADGRKVKGVIHWVSAVNNHPAEFRLYDRLFTVPNPGAEDDIESVLNP 502
Query: 525 DELIVRKGLLEKD-ANVKAGEIVQFERFGFVRID 557
+ L++++G +E+ AN +A + QFER G+ D
Sbjct: 503 NSLVIKQGFVEQSLANAEAEKGYQFEREGYFCAD 536
>sp|Q9KTA6|SYQ_VIBCH GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|11271692|pir||H82254 glutaminyl-tRNA synthetase
VC0997 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9655459|gb|AAF94158.1| (AE004181)
glutaminyl-tRNA synthetase [Vibrio cholerae]
Length = 556
Score = 213 bits (536), Expect = 5e-54
Identities = 151/449 (33%), Positives = 229/449 (50%), Gaps = 36/449 (8%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P+ + E + E I +D
Sbjct: 28 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPEKENLE--YVESIKKD 85
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+ WLG E+ Y+SD + Y+YA ELI+ G AYV PE+ RE R + G P
Sbjct: 86 VTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPEQIREYRGTLTEPGKHSP 145
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM GE+ EG+A +R K D+ +RD P L V H + G+
Sbjct: 146 YRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRD-PVLYRVRFAEHHQTGD 204
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWE-YPVTVHHGRLSI 333
K+ ++P+Y+F I D G+TH E +N ++ + +P RL++
Sbjct: 205 KWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNL 264
Query: 334 EGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVS 393
E ++SK K + + E GWDDPR+ TI LRRRG P AI+E +G+ K + +
Sbjct: 265 EYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIE 324
Query: 394 WDNLAAINRKLVDPIANRYFFVADPVPMEVE----GAPEFIAKIPLHPDHPERGTRELRF 449
+ L + R ++ A R V DPV + +E G E + + HP+ PE G RE+ F
Sbjct: 325 YSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLT-LANHPNKPEMGDREVPF 383
Query: 450 TPGKPIYVSKDDL--------DLLKPGSFVRLKDLF--NVEIVEVGEK--IKAKFHSFEY 497
T + +++ ++D L G VRL+ + E +E E+ I F S++
Sbjct: 384 T--RELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIKAERIEKDEQGNITTIFCSYDP 441
Query: 498 EIARKNK------WRMIHWV--PEGRPCE 518
E KN +IHWV +G P E
Sbjct: 442 ETLGKNPADGRKVKGVIHWVSAEKGVPAE 470
>sp|P57490|SYQ_BUCAI GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|10039079|dbj|BAB13113.1| (AP001119) glutaminyl-tRNA
synthetase [Buchnera sp. APS]
Length = 571
Score = 212 bits (535), Expect = 7e-54
Identities = 159/529 (30%), Positives = 254/529 (47%), Gaps = 83/529 (15%)
Query: 102 TRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLE 161
TRF P P+G H+G+A++ L++E A +Y G+ LRFDDT+P + + + E I D+
Sbjct: 31 TRFPPEPNGYLHIGHAKSICLNFELASLYKGRCNLRFDDTNPLKENIK--YIESIKHDIN 88
Query: 162 WLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK----GIPCPHR 216
WLG K + YAS+ Y+YA+ELIK G AYV E+ RE R G P+R
Sbjct: 89 WLGYKWHGNVRYASEYFLKLYQYAQELIKKGLAYVDHLTKEQIREYRGTLNTPGKNSPYR 148
Query: 217 DEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKY 276
+ ++ +E + KM G++ EGEA +R K +++ + +RD RI+ +H + NK+
Sbjct: 149 NRTIQENIELFEKMKKGDFSEGEACLRAKINMSSSSIIMRDPVLYRIIFIKHH-QTQNKW 207
Query: 277 RVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWE-YPVTVHHGRLSIEG 335
++P+Y+FA + D G+TH E +N+ +I + + YP RL++E
Sbjct: 208 CIYPMYDFAHCLSDSIEGITHSLCTLEFQDNKFLYNWILKNTSVKHYPKQYEFSRLNLEF 267
Query: 336 VILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWD 395
ILSK K + I++ GWDDPR+ T+ ALRR+G P +IK ++G+ K + + +
Sbjct: 268 SILSKRKIKILIDKNIIEGWDDPRIPTLSALRRKGYTPSSIKNFCQKIGVTKQNNLIEFS 327
Query: 396 NLAAINRKLVDPIANRYFFVADPVP-----MEVEGAPEFIAKIPLHPDHPERGTRELRFT 450
L RK ++ A R + DP+ ++ EFI +P HP++PE GT ++ FT
Sbjct: 328 MLEHCIRKELNQTAIRTMAILDPIKIFLYNLDSNYKEEFI--VPNHPNNPEMGTHKIIFT 385
Query: 451 PGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGEKIKAKF----HSFEYE-------- 498
IY+ + D + RLK +GEKI+ ++ H+ + E
Sbjct: 386 --NTIYIDRSDFKEKYDKKYKRLK---------LGEKIRLRYSYIIHAEKIEKDEYGNIS 434
Query: 499 ----------IARKNKWR----MIHWV---------------------PEGRPCEVIIPE 523
+ RK K +IHW+ PE + ++
Sbjct: 435 NIICYCDLNTLGRKPKDNKNPAVIHWISEKNTLSAEFKLYDQLFNIKNPEQQENFLLYIN 494
Query: 524 GDELIVRKGLLEKD---------ANVKAGEIVQFERFGFVRIDKIEGEK 563
LI + G +EK +N QFER G+ ID I+ +K
Sbjct: 495 SKSLIKKFGFIEKKIGEEIQKKISNNNIEIFFQFERIGYFCIDFIDSKK 543
>dbj|BAB03361.1| (AP002486) ESTs AU097578(E0618),AU085793(C53601),
C27977(C53601),C71921(E0618) correspond to a region of
the predicted gene.~Similar to Lupinus luteus glutaminyl
-tRNA synthetase (P52780) [Oryza sativa]
Length = 791
Score = 210 bits (530), Expect = 3e-53
Identities = 166/574 (28%), Positives = 266/574 (45%), Gaps = 65/574 (11%)
Query: 37 ELRSKAREIVPIINKVVEEVNSLSLDEQKAKLMEIYPEYFEKKEE---KKEEKKGLPPLP 93
++ K +V EE+N S+ Q + +++ E F K+ L
Sbjct: 204 KVEEKKAAVVTAAPPSEEELNPYSIFPQPEENFKVHTEIFYSDGNIWRAHNSKEILEKHL 263
Query: 94 KAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFY 153
KA GKV+TRF P P+G H+G+A+A + + AK G LRFDDT+P+ ++ E +
Sbjct: 264 KATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAKERNGHCYLRFDDTNPEAEKKE--YI 321
Query: 154 EMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPC 213
+ I E + W+G +P ++ Y SD + Y++A ELI+ G AYV E+ +E R+K +
Sbjct: 322 DHIQEIVHWMGWEPYKVTYTSDYFQALYEHAVELIRKGLAYVDHQTAEEIKEYREKKMNS 381
Query: 214 PHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAG 273
P RD P+E L+ + M G EG A +R+K D+ + N + D A RI P HP AG
Sbjct: 382 PWRDRPIEESLKLFEDMRRGLIAEGAATLRMKQDMQNDNKNMSDLIAYRIKFTP-HPHAG 440
Query: 274 NKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSI 333
+K+ ++P Y++A + D +TH E ++ G P + RL+I
Sbjct: 441 DKWCIYPSYDYAHCMVDSLENITHSLCTLEFDIRRPSYYWLLVALGLYQPYVWEYSRLNI 500
Query: 334 EGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVS 393
++SK K + + E GWDDPRL T+ LRRRG+ AI I +G+ +S +
Sbjct: 501 SNTVMSKRKLNRLVTEKWVDGWDDPRLLTLAGLRRRGVSSTAINSFICGIGITRS--LIR 558
Query: 394 WDNLAAINRKLVDPIANRYFFVADPVP-----MEVEGAPEFIAKIPLHPDHPERGTRELR 448
D L R+ ++ A+R V +P+ +E E + K + PD P
Sbjct: 559 VDRLEYHIREELNKTASRAMVVLNPLKVVITNLEDEKVIDLDGK--MWPDAPADDASSYY 616
Query: 449 FTP-GKPIYVSKDDLDL--------LKPGSFVRLKDLFNVEIVEV--GE------KIKAK 491
P + +Y+ K D L L PG L+ F ++ EV G+ +I+A
Sbjct: 617 KVPFSRIVYIEKTDFRLKDSKDYYGLAPGKSALLRYAFPIKCTEVVYGDNPDDIIEIRA- 675
Query: 492 FHSFEYEIARKNKWR-MIHWV----PEGRPCEVIIPEGDELIVRKGLLE-----KDANVK 541
EY+ ++ K + ++HWV P P +V + D+L + + E D N
Sbjct: 676 ----EYDPSKTTKPKGVLHWVAQPAPGVEPLKVEVRLFDKLFLSENPAELEDWLGDLNPN 731
Query: 542 AGEIV------------------QFERFGFVRID 557
+ E++ QFER G+ +D
Sbjct: 732 SKEVIKGAYAVPSLATAVLGDKFQFERLGYFAVD 765
>sp|P00962|SYQ_ECOLI GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|7428480|pir||SYECQT glutamine--tRNA ligase (EC
6.1.1.18) [validated] - Escherichia coli
>gi|463198|emb|CAA24894.1| (V01575) glutaminyl-tRNA
synthetase precursor [Escherichia coli]
>gi|1786895|gb|AAC73774.1| (AE000171) glutamine tRNA
synthetase [Escherichia coli K12]
>gi|4062281|dbj|BAA35328.1| (D90707) Glutaminyl-tRNA
synthetase (EC 6.1.1.18) (glutamine-tRNA ligase)
(GlnRS). [Escherichia coli]
Length = 554
Score = 209 bits (526), Expect = 8e-53
Identities = 164/515 (31%), Positives = 251/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 28 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 85
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 86 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSP 145
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 146 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 204
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E +N R +Y++ + VH
Sbjct: 205 KWCIYPMYDFTHCISDALEGITHSLCTLEFQDN----RRLYDWVLDNITIPVHPRQYEFS 260
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 261 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 320
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 321 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 379
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 380 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 437
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 438 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 495
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 496 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 528
>gb|AAA87980.1| (J01617) glutaminyl-tRNA synthetase [Escherichia coli]
>gi|146175|gb|AAA23884.1| (M10187) glutaminyl-tRNA
synthetase [Escherichia coli]
Length = 551
Score = 209 bits (526), Expect = 8e-53
Identities = 164/515 (31%), Positives = 251/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 28 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 85
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 86 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSP 145
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 146 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 204
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E +N R +Y++ + VH
Sbjct: 205 KWCIYPMYDFTHCISDALEGITHSLCTLEFQDN----RRLYDWVLDNITIPVHPRQYEFS 260
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 261 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 320
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 321 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 379
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 380 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 437
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 438 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 495
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 496 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 528
>pdb|1QTQ|A Chain A, Glutaminyl-Trna Synthetase Complexed With Trna And An
Amino Acid Analog >gi|999529|pdb|1GTR|A Chain A,
Glutaminyl-Trna Synthetase (E.C.6.1.1.18) Complexed With
Trna And Atp (-8 Degrees C) >gi|999531|pdb|1GTS|A Chain
A, Glutaminyl-Trna Synthetase (E.C.6.1.1.18) Complexed
With Trna And Amp (8 Degrees C) >gi|229955|pdb|1GSG|P
Chain P, Glutaminyl-TRNA Synthetase (GlnRS) Complex With
tRNAGln And ATP
Length = 553
Score = 209 bits (526), Expect = 8e-53
Identities = 164/515 (31%), Positives = 251/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 27 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 84
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 85 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSP 144
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 145 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 203
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E +N R +Y++ + VH
Sbjct: 204 KWCIYPMYDFTHCISDALEGITHSLCTLEFQDN----RRLYDWVLDNITIPVHPRQYEFS 259
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 260 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 319
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 320 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 378
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 379 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 436
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 437 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 494
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 495 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 527
>pdb|1EUQ|A Chain A, Crystal Structure Of Glutaminyl-Trna Synthetase Complexed
With A Trna-Gln Mutant And An Active-Site Inhibitor
>gi|8569295|pdb|1EUY|A Chain A, Glutaminyl-Trna
Synthetase Complexed With A Trna Mutant And An Active
Site Inhibitor >gi|8569569|pdb|1EXD|A Chain A, Crystal
Structure Of A Tight-Binding Glutamine Trna Bound To
Glutamine Aminoacyl Trna Synthetase
Length = 548
Score = 209 bits (526), Expect = 8e-53
Identities = 164/515 (31%), Positives = 251/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 28 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 85
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 86 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSP 145
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 146 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 204
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E +N R +Y++ + VH
Sbjct: 205 KWCIYPMYDFTHCISDALEGITHSLCTLEFQDN----RRLYDWVLDNITIPVHPRQYEFS 260
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 261 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 320
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 321 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 379
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 380 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 437
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 438 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 495
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 496 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 528
>sp|P52780|SYQ_LUPLU GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|7437754|pir||T09643 glutamine--tRNA ligase (EC
6.1.1.18) - yellow lupine >gi|2995455|emb|CAA62901.1|
(X91787) tRNA-glutamine synthetase [Lupinus luteus]
Length = 794
Score = 208 bits (525), Expect = 1e-52
Identities = 153/511 (29%), Positives = 243/511 (46%), Gaps = 51/511 (9%)
Query: 94 KAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFY 153
KA GKV+TRF P P+G H+G+A+A + + AK G LRFDDT+P+ ++ E +
Sbjct: 265 KATGGKVLTRFPPEPNGYLHIGHAKAMFVDFGLAKDRNGGCYLRFDDTNPEAEKKE--YI 322
Query: 154 EMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPC 213
+ I E ++W+G +P +I Y S+ + Y++A ELI+ G AYV ++ +E R+K +
Sbjct: 323 DHIEEIVQWMGWEPFKITYTSNYFQELYEFAVELIRRGHAYVDHQTADEIKEYREKKLNS 382
Query: 214 PHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAG 273
P RD P+ L+ + M G +EG+A +R+K D+ N + D A RI P HP AG
Sbjct: 383 PWRDRPISESLKLFEDMRRGFIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTP-HPHAG 441
Query: 274 NKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSI 333
+K+ ++P Y++A I D VTH E ++ G P + RL++
Sbjct: 442 DKWCIYPSYDYAHCIVDSIENVTHSLCTLEFETRRASYYWLLHALGIYQPYVWEYSRLNV 501
Query: 334 EGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDAT-V 392
++SK K + + E GWDDPRL T+ LRRRG+ P AI + +G+ +SD T +
Sbjct: 502 SNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRGMTPTAINAFVRGMGITRSDGTLI 561
Query: 393 SWDNLAAINRKLVDPIANRYFFVADPVP-----MEVEGAPEFIAKIPLHPDHPERGTREL 447
S + L R+ ++ A R V P+ +E + A E AK PD
Sbjct: 562 SVERLEYHVREELNKTAPRAMVVLHPLKVVITNLEAKSAIEVDAK--KWPDAQADDASAF 619
Query: 448 RFTP-GKPIYVSKDDLDL--------LKPGSFVRLKDLFNVEIVEV---GEKIKAKFHSF 495
P +Y+ + D + L PG V L+ F ++ EV +
Sbjct: 620 YKIPFSNVVYIERSDFRMQDSKDYYGLAPGKSVILRYAFPIKCTEVILADDNETILEIRA 679
Query: 496 EYEIARKNKWR-MIHWV----PEGRPCEVIIPEGDELIVRKGLLEKD------------- 537
EY+ ++K K + ++HWV P P +V + + L + + E D
Sbjct: 680 EYDPSKKTKPKGVLHWVSQPSPGVDPLKVEVRLFERLFLSENPAELDNWLGDLNPHSKVE 739
Query: 538 ----------ANVKAGEIVQFERFGFVRIDK 558
+ K G+ QFER G+ +D+
Sbjct: 740 ISNAYGVSLLKDAKLGDRFQFERLGYFAVDQ 770
>pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Complexed With
Glutamine Transfer Rna
Length = 553
Score = 208 bits (524), Expect = 1e-52
Identities = 164/515 (31%), Positives = 250/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 27 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 84
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 85 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSP 144
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 145 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 203
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E N R +Y++ + VH
Sbjct: 204 KWCIYPMYDFTHCISDALEGITHSLCTLEFQNN----RRLYDWVLDNITIPVHPRQYEFS 259
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 260 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 319
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 320 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 378
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 379 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 436
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 437 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 494
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 495 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 527
>pdb|1QRU|A Chain A, Glutaminyl-Trna Synthetase Mutant I129t Complexed With
Glutamine Transfer Rna
Length = 553
Score = 208 bits (524), Expect = 1e-52
Identities = 164/515 (31%), Positives = 251/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 27 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 84
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 85 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQTREYRGTLTQPGKNSP 144
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 145 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 203
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E +N R +Y++ + VH
Sbjct: 204 KWCIYPMYDFTHCISDALEGITHSLCTLEFQDN----RRLYDWVLDNITIPVHPRQYEFS 259
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 260 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 319
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 320 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 378
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 379 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 436
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 437 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 494
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 495 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 527
>pdb|1QRT|A Chain A, Glutaminyl-Trna Synthetase Mutant D235g Complexed With
Glutamine Transfer Rna
Length = 553
Score = 207 bits (522), Expect = 2e-52
Identities = 164/515 (31%), Positives = 250/515 (47%), Gaps = 71/515 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P + E + E I D
Sbjct: 27 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIE--YVESIKND 84
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG + Y+SD + + YA ELI G AYV PE+ RE R G P
Sbjct: 85 VEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSP 144
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM G ++EG+A +R K D+ P +RD P L + H + GN
Sbjct: 145 YRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRD-PVLYRIKFAEHHQTGN 203
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH-----HG 329
K+ ++P+Y+F I D G+TH E N R +Y++ + VH
Sbjct: 204 KWCIYPMYDFTHCISDALEGITHSLCTLEFQGN----RRLYDWVLDNITIPVHPRQYEFS 259
Query: 330 RLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD 389
RL++E ++SK K + + GWDDPR+ TI LRRRG +I+E +G+ K D
Sbjct: 260 RLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQD 319
Query: 390 ATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVE---GAPEFIAKIPLHPDHPERGTRE 446
T+ +L + R+ ++ A R V DPV + +E G E + +P HP+ PE G+R+
Sbjct: 320 NTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT-MPNHPNKPEMGSRQ 378
Query: 447 LRFTPGKPIYVSKDDL--------DLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHS 494
+ F+ I++ + D L G VRL++ + ++ V + I F +
Sbjct: 379 VPFS--GEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCT 436
Query: 495 FEYEIARKNK------WRMIHWVPEGR--PCE---------------------VIIPEGD 525
++ + K+ +IHWV P E VI PE
Sbjct: 437 YDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPE-- 494
Query: 526 ELIVRKGLLE---KDANVKAGEIVQFERFGFVRID 557
L++++G E KDA AG+ QFER G+ +D
Sbjct: 495 SLVIKQGFAEPSLKDA--VAGKAFQFEREGYFCLD 527
>pir||F83421 glutaminyl-tRNA synthetase PA1794 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947776|gb|AAG05183.1|AE004605_5 (AE004605)
glutaminyl-tRNA synthetase [Pseudomonas aeruginosa]
Length = 556
Score = 207 bits (522), Expect = 2e-52
Identities = 146/460 (31%), Positives = 230/460 (49%), Gaps = 42/460 (9%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
L + K+VTRF P P+G H+G+A++ L++ A+ + G LRFDDT+P + E
Sbjct: 21 LDAGKHAKIVTRFPPEPNGYLHIGHAKSICLNFGLAQEFAGDCHLRFDDTNPAKEDQE-- 78
Query: 152 FYEMIIEDLEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR--- 207
+ + I D++WLG + E+ YAS+ + + +A ELIK GKA+VC PE+ RE R
Sbjct: 79 YIDAIEADIKWLGFQWSGEVCYASNYFDQLHAWAVELIKAGKAFVCDLGPEEMREYRGTL 138
Query: 208 -DKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDN 266
+ G P+RD VE L+ + +M GE+ +G +R K D+ PN +RD P L + +
Sbjct: 139 TEPGRNSPYRDRSVEENLDLFARMKAGEFPDGARSLRAKIDMGSPNMNLRD-PILYRIRH 197
Query: 267 PNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTV 326
+H + G+K+ ++P Y+F D G+TH E ++ R +YE+F PV
Sbjct: 198 AHHHQTGDKWCIYPSYDFTHGQSDAIEGITHSICTLEFEDH----RPLYEWFLANLPVPA 253
Query: 327 H-----HGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELII 381
RL++ + SK K ++ ++EG GWDDPR+ T+ RRRG PE+I+
Sbjct: 254 QPRQYEFSRLNLNYTVTSKRKLKQLVDEGHVSGWDDPRMSTLSGYRRRGYTPESIRNFCE 313
Query: 382 EVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEGAPEFIA---KIPLHPD 438
+G+ ++ V L R +D A R V P+ + + PE ++P HP
Sbjct: 314 MIGVNRASGVVDIGMLEFSIRDHLDATAPRAMCVLKPLKVVITNYPEGQVENLELPRHPK 373
Query: 439 HPERGTRELRFTPGKPIYVSKDDLD--------LLKPGSFVRLKDLFNVE----IVEVGE 486
+ G R L F G+ +++ D + L PG VRL+ + + I +
Sbjct: 374 E-DMGVRVLPF--GRELFIDAGDFEEVPPAGYKRLIPGGEVRLRGSYVIRADEAIKDADG 430
Query: 487 KIKAKFHSFEYEIARKNK-----WRMIHWVP-EGR-PCEV 519
I S++ + KN +IHWVP EG CEV
Sbjct: 431 NIVELRCSYDPDTLGKNPEGRKVKGVIHWVPAEGSVECEV 470
>sp|Q9PDP1|SYQ_XYLFA GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|11271694|pir||G82693 glutaminyl-tRNA synthetase
XF1338 [imported] - Xylella fastidiosa (strain 9a5c)
>gi|9106335|gb|AAF84147.1|AE003966_8 (AE003966)
glutaminyl-tRNA synthetase [Xylella fastidiosa]
Length = 580
Score = 200 bits (503), Expect = 4e-50
Identities = 121/396 (30%), Positives = 196/396 (48%), Gaps = 27/396 (6%)
Query: 102 TRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLE 161
TRF P P+G H+G+A+A L + A +GG LR DDT+P + +P F I +D+
Sbjct: 37 TRFPPEPNGYLHIGHAKAICLDFGVAAEFGGHCTLRMDDTNPS--KEDPAFAAAIQDDVS 94
Query: 162 WLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCPHRD 217
WLG + + + SD E+ Y AE+LI GKAYVC E+ RE R + G P P R+
Sbjct: 95 WLGFHWNALRHTSDYFEVLYLAAEKLITDGKAYVCDLNSEQVREYRGTLTEAGRPSPWRE 154
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
+ LE +R+M G + +G +R K D+ N +RD PAL + + H GN +
Sbjct: 155 RSPDENLELFRQMRAGTFPDGTRTLRAKIDMASGNINLRD-PALYRIKHVEHQNTGNTWP 213
Query: 278 VWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGW----------------- 320
++P+Y+FA A+ D G+TH E ++ + +
Sbjct: 214 IYPMYDFAHALSDAIEGITHSLCTLEFEDHRPLYDWCVNHVDLPNNSHLLKPLLDKGFPQ 273
Query: 321 --EYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKE 378
P + RL+I ++SK K ++E GWDDPR+ T++ LRRRG P A++
Sbjct: 274 EPSQPRQIEFSRLNINYTVMSKRKLTALVDEKLVEGWDDPRMYTLQGLRRRGYTPAAMRL 333
Query: 379 LIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEVEGAPEFIAKIPLHPD 438
+ +G+ K ++ + + L R+ +D IA R P+ + + PE + + P+
Sbjct: 334 FVERIGISKQNSIIDFSVLENCLRENLDTIAPRRMATIAPLKLVLTNLPEDHEEQLIFPN 393
Query: 439 HPERGTRELRFTP-GKPIYVSKDDLDLLKPGSFVRL 473
HP+ T+ R P + +++ +DD + P + RL
Sbjct: 394 HPKDDTQGTRTMPFSRELWIERDDFSEIPPKGWKRL 429
>sp|O62431|SYQ_CAEEL PROBABLE GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE)
(GLNRS) >gi|7509764|pir||T26811 hypothetical protein
Y41E3.4 - Caenorhabditis elegans
>gi|3880882|emb|CAB08998.1| (Z95559) predicted using
Genefinder~contains similarity to Pfam domain: PF00749
(tRNA synthetases class I (E and Q)), Score=527.8,
E-value=2.5e-155, N=1~cDNA EST EMBL:M89275 comes from
this gene~cDNA EST yk12a9.3 comes from this gene~cDNA
EST yk4e11.3 >
Length = 786
Score = 198 bits (498), Expect = 2e-49
Identities = 157/506 (31%), Positives = 242/506 (47%), Gaps = 56/506 (11%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
GKVVTRF P P+G H+G+A+A +++ YAK GG LRFDDT+P+ + E F+ I
Sbjct: 268 GKVVTRFPPEPNGVLHIGHAKAININFGYAKAMGGVCNLRFDDTNPE--KEEEKFFSAIE 325
Query: 158 EDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRD 217
+ + WLG P + ++SD + Y +A +LI+ G A+VC K E+ R + P R+
Sbjct: 326 DIVHWLGYDPARVTHSSDNFQQLYLWAVKLIQKGLAFVCHQKVEEMRGFEVQ--LSPWRE 383
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
P+E ++ + M NG++ EGEA +R+K L D A RI P+H R GN++
Sbjct: 384 RPIEENIQLFEDMKNGKFDEGEATLRLKLTLEEGKV---DPVAYRIKYVPHH-RTGNQWC 439
Query: 278 VWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVI 337
++P Y++ + D +TH +E + ++ PV +GRL++ +
Sbjct: 440 IYPTYDYTHCLCDSIENITHSLCTKEFQSRRSSYYWLCNALDIYCPVQWEYGRLNVNYTV 499
Query: 338 LSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNL 397
+SK K K I WDDPRL T+ ALRRRGI EAI + ++GL S + L
Sbjct: 500 VSKRKILKLITTKTVNDWDDPRLFTLTALRRRGIPSEAINRFVAKLGLTMSQMVIDPHVL 559
Query: 398 AAINRKLVDPIANRYFFVADPVPMEVEGAPEFIAKIPLH-PDHPERGT--RELRFTPGKP 454
A R ++ A R V + + + +E E + PD P T R+ + +
Sbjct: 560 DATVRDYLNIHAPRTMAVLEGLKLTIENFSELNLPSSVDVPDFPSDPTDPRKHSVSVDRE 619
Query: 455 IYVSKDDLDLLKPG----SFVRLKDLFNVEIVEVG-------EKIKAKFHSFEY-----E 498
I++ K D KP SF RL V + +G E A+ H E +
Sbjct: 620 IFIEKSD---YKPDDSDKSFRRLTPKQAVGLKHIGLVLRFVKEVKDAEGHVTEVVVKAEK 676
Query: 499 IARKNKWR-MIHWVPEGRPCEV----------------IIPEG-------DEL-IVRKGL 533
++ K+K + IHWV + CEV ++P G D L +V L
Sbjct: 677 LSEKDKPKAFIHWVAKPVSCEVRLYDRLFKSKNPEDAQLVPGGFLSDINPDSLTVVYNAL 736
Query: 534 LEKD-ANVKAGEIVQFERFGFVRIDK 558
+++ A K + QFER GF +D+
Sbjct: 737 IDQSIAKSKVYDRFQFERIGFFCVDR 762
>sp|P57000|SYQ_NEIMA GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
Length = 562
Score = 198 bits (497), Expect = 2e-49
Identities = 149/483 (30%), Positives = 231/483 (46%), Gaps = 41/483 (8%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A +Y G LRFDDT+P+ + E + I ED
Sbjct: 29 VQTRFPPEPNGYLHIGHAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDE--YVNAIKED 86
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG E +AS+ + Y YA LIK GKAYV PE+ RE R + G P
Sbjct: 87 VEWLGFHWAGEPRFASNYFDQLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSP 146
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L+ + +M NGE+ +G +R+K D+ N +RD P + + +H G+
Sbjct: 147 YRDRSVEENLDLFTRMKNGEFPDGSKTLRLKIDMASGNINMRD-PVIYRIRRAHHHNTGD 205
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY---PVTVHHGRL 331
K+ ++P+Y++ I D G+TH E + ++ + + P RL
Sbjct: 206 KWCIYPMYDYTHCISDAIEGITHSLCTLEFEAHRPLYDWVLDNIHAPHATRPRQYEFSRL 265
Query: 332 SIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDAT 391
+ I SK K + + E GWDDPR+ TI +RRRG PE ++ G+ KS+
Sbjct: 266 ELLYTITSKRKLNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENI 325
Query: 392 VSWDNLAAINRKLVDPIANRYFFVADPVPMEV---EGAPEFIAKIPLHPDHPERGTRELR 448
V L R+ ++ A R V +P+ + + E + HP+H E G RE+
Sbjct: 326 VDMSVLEGAIREELENSAPRLMAVLNPLKVTLTNFEAGRTQSRRAAFHPNHEEMGEREVP 385
Query: 449 FTPGKPIYVSKDD--------LDLLKPGSFVRLKDLFNV---EIV--EVGEKIKAKFHSF 495
+ + IY+ DD L PG VRL+ + + E+V E G ++ K S
Sbjct: 386 IS--QTIYIEADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKC-SI 442
Query: 496 EYEIARKNK-----WRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANVKA--GEIVQF 548
+++ KN +IHWV E+ + D L +E+ V+ GE + F
Sbjct: 443 DHDTLGKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLFT----IERPDAVRGEDGEYLPF 498
Query: 549 ERF 551
F
Sbjct: 499 TDF 501
>pir||D81799 glutamine--tRNA ligase (EC 6.1.1.18) NMA1748 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7380390|emb|CAB84976.1| (AL162757) glutaminyl-tRNA
synthetase [Neisseria meningitidis Z2491]
Length = 573
Score = 198 bits (497), Expect = 2e-49
Identities = 149/483 (30%), Positives = 231/483 (46%), Gaps = 41/483 (8%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A +Y G LRFDDT+P+ + E + I ED
Sbjct: 40 VQTRFPPEPNGYLHIGHAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDE--YVNAIKED 97
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+EWLG E +AS+ + Y YA LIK GKAYV PE+ RE R + G P
Sbjct: 98 VEWLGFHWAGEPRFASNYFDQLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSP 157
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L+ + +M NGE+ +G +R+K D+ N +RD P + + +H G+
Sbjct: 158 YRDRSVEENLDLFTRMKNGEFPDGSKTLRLKIDMASGNINMRD-PVIYRIRRAHHHNTGD 216
Query: 275 KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY---PVTVHHGRL 331
K+ ++P+Y++ I D G+TH E + ++ + + P RL
Sbjct: 217 KWCIYPMYDYTHCISDAIEGITHSLCTLEFEAHRPLYDWVLDNIHAPHATRPRQYEFSRL 276
Query: 332 SIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDAT 391
+ I SK K + + E GWDDPR+ TI +RRRG PE ++ G+ KS+
Sbjct: 277 ELLYTITSKRKLNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENI 336
Query: 392 VSWDNLAAINRKLVDPIANRYFFVADPVPMEV---EGAPEFIAKIPLHPDHPERGTRELR 448
V L R+ ++ A R V +P+ + + E + HP+H E G RE+
Sbjct: 337 VDMSVLEGAIREELENSAPRLMAVLNPLKVTLTNFEAGRTQSRRAAFHPNHEEMGEREVP 396
Query: 449 FTPGKPIYVSKDD--------LDLLKPGSFVRLKDLFNV---EIV--EVGEKIKAKFHSF 495
+ + IY+ DD L PG VRL+ + + E+V E G ++ K S
Sbjct: 397 IS--QTIYIEADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKC-SI 453
Query: 496 EYEIARKNK-----WRMIHWVPEGRPCEVIIPEGDELIVRKGLLEKDANVKA--GEIVQF 548
+++ KN +IHWV E+ + D L +E+ V+ GE + F
Sbjct: 454 DHDTLGKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLFT----IERPDAVRGEDGEYLPF 509
Query: 549 ERF 551
F
Sbjct: 510 TDF 512
>gb|AAD38643.1|AF145668_1 (AF145668) BcDNA.GH11673 [Drosophila melanogaster]
Length = 778
Score = 196 bits (494), Expect = 5e-49
Identities = 125/391 (31%), Positives = 196/391 (49%), Gaps = 13/391 (3%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
GKV TRF P P+G H+G+A+A +++ YA + G LR+DDT+P+ + E F+ I
Sbjct: 265 GKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGVCYLRYDDTNPE--KEEEKFFLAIK 322
Query: 158 EDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRD 217
E +EWLG KP +I Y+SD + Y++A LI G AYVC K E+ + K P P R+
Sbjct: 323 EMVEWLGYKPFKITYSSDNFQQLYEWAVVLINKGLAYVCHQKAEELKGFNPK--PSPWRE 380
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
P+E L + M G+ EG A +R+K L P + +H R G+ +
Sbjct: 381 RPIEESLRLFEDMKRGKIDEGAATLRMKVTLEEGKMD----PVAYRIKFISHHRTGSDWC 436
Query: 278 VWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVI 337
++P Y++ + D +TH +E + ++ G PV +GRL++ +
Sbjct: 437 IYPTYDYTHCLCDSLEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYAL 496
Query: 338 LSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNL 397
+SK K K I E WDDPRL T+ ALRRRG EAI ++G+ + V L
Sbjct: 497 VSKRKIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIAVDPAML 556
Query: 398 AAINRKLVDPIANRYFFVADPVPMEVEGAPEFI---AKIPLHPDHPERGTRELRFTPGKP 454
A R +++ A R V +P+ + ++ P ++P P +P++GT ++ T K
Sbjct: 557 EAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQNPQQGTHKI--TLDKV 614
Query: 455 IYVSKDDLDLLKPGSFVRLKDLFNVEIVEVG 485
IY+ + D L + RL +V + G
Sbjct: 615 IYIEQGDFKLEPEKGYRRLAPKQSVGLRHAG 645
>gb|AAF56434.1| (AE003751) BcDNA:GH11673 gene product [Drosophila melanogaster]
Length = 759
Score = 196 bits (494), Expect = 5e-49
Identities = 125/391 (31%), Positives = 196/391 (49%), Gaps = 13/391 (3%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
GKV TRF P P+G H+G+A+A +++ YA + G LR+DDT+P+ + E F+ I
Sbjct: 246 GKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGVCYLRYDDTNPE--KEEEKFFLAIK 303
Query: 158 EDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRD 217
E +EWLG KP +I Y+SD + Y++A LI G AYVC K E+ + K P P R+
Sbjct: 304 EMVEWLGYKPFKITYSSDNFQQLYEWAVVLINKGLAYVCHQKAEELKGFNPK--PSPWRE 361
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
P+E L + M G+ EG A +R+K L P + +H R G+ +
Sbjct: 362 RPIEESLRLFEDMKRGKIDEGAATLRMKVTLEEGKMD----PVAYRIKFISHHRTGSDWC 417
Query: 278 VWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVI 337
++P Y++ + D +TH +E + ++ G PV +GRL++ +
Sbjct: 418 IYPTYDYTHCLCDSLEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYAL 477
Query: 338 LSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNL 397
+SK K K I E WDDPRL T+ ALRRRG EAI ++G+ + V L
Sbjct: 478 VSKRKIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIAVDPAML 537
Query: 398 AAINRKLVDPIANRYFFVADPVPMEVEGAPEFI---AKIPLHPDHPERGTRELRFTPGKP 454
A R +++ A R V +P+ + ++ P ++P P +P++GT ++ T K
Sbjct: 538 EAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQNPQQGTHKI--TLDKV 595
Query: 455 IYVSKDDLDLLKPGSFVRLKDLFNVEIVEVG 485
IY+ + D L + RL +V + G
Sbjct: 596 IYIEQGDFKLEPEKGYRRLAPKQSVGLRHAG 626
>sp|P56927|SYQ_NEIMB GLUTAMINYL-TRNA SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|11271698|pir||E81069 glutaminyl-tRNA synthetase
NMB1560 [imported] - Neisseria meningitidis (group B
strain MD58) >gi|7226807|gb|AAF41914.1| (AE002506)
glutaminyl-tRNA synthetase [Neisseria meningitidis MC58]
Length = 562
Score = 196 bits (492), Expect = 8e-49
Identities = 146/464 (31%), Positives = 223/464 (47%), Gaps = 38/464 (8%)
Query: 96 EKGK---VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIF 152
E GK V TRF P P+G H+G+A++ L++ A +Y G LRFDDT+P+ + E +
Sbjct: 22 ESGKHTAVQTRFPPEPNGYLHIGHAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDE--Y 79
Query: 153 YEMIIEDLEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR---- 207
I ED+EWLG E +AS+ + Y YA LIK GKAYV PE+ RE R
Sbjct: 80 VNAIKEDVEWLGFHWAGEPRFASNYFDQLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLT 139
Query: 208 DKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNP 267
+ G P+RD VE L+ + +M NGE+ +G +R+K D+ N +RD P + +
Sbjct: 140 EAGKNSPYRDRSVEENLDLFTRMKNGEFPDGSKTLRLKIDMASGNINMRD-PVIYRIRRA 198
Query: 268 NHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY---PV 324
+H G+K+ ++P+Y++ I D G+TH E + + + + P
Sbjct: 199 HHHNTGDKWCIYPMYDYTHCISDAIEGITHSLCTLEFEAHRPLYDCVLDNIPAPHATRPR 258
Query: 325 TVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVG 384
RL + I SK K + + E GWDDPR+ TI +RRRG PE ++ G
Sbjct: 259 QYEFSRLELLYTITSKRKLNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAG 318
Query: 385 LKKSDATVSWDNLAAINRKLVDPIANRYFFVADPVPMEV---EGAPEFIAKIPLHPDHPE 441
+ KS+ V L R+ ++ A R V +P+ + + E + HP+H E
Sbjct: 319 ISKSENIVDMSVLEGAIREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEE 378
Query: 442 RGTRELRFTPGKPIYVSKDD--------LDLLKPGSFVRLKDLFNV---EIV--EVGEKI 488
G RE+ + + IY+ DD L PG VRL+ + + E+V E G +
Sbjct: 379 MGEREVPIS--QTIYIEADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVV 436
Query: 489 KAKFHSFEYEIARKNK-----WRMIHWVPEGRPCEVIIPEGDEL 527
+ K S +++ KN +IHWV E+ + D L
Sbjct: 437 ELKC-SIDHDTLGKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRL 479
>gi|4826960 glutaminyl-tRNA synthetase; glutamine-tRNA synthetase [Homo
sapiens] >gi|1351170|sp|P47897|SYQ_HUMAN GLUTAMINYL-TRNA
SYNTHETASE (GLUTAMINE--TRNA LIGASE) (GLNRS)
>gi|2135271|pir||I37422 glutamine--tRNA ligase (EC
6.1.1.18) - human >gi|558586|emb|CAA53600.1| (X76013)
glutaminyl-tRNA synthetase [Homo sapiens]
Length = 775
Score = 189 bits (476), Expect = 6e-47
Identities = 145/502 (28%), Positives = 227/502 (44%), Gaps = 53/502 (10%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
G+V TRF P P+G H+G+A+A ++ YAK G LRFDDT+P+ + E F+ I
Sbjct: 262 GQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPE--KEEAKFFTAIC 319
Query: 158 EDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRD 217
+ + WLG P ++ YASD + Y +A ELI+ G AYVC + E+ + +P P RD
Sbjct: 320 DMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQRGEELKG--HNTLPSPWRD 377
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
P+E L + M G++ EGEA +R+K + D A R+ P+H R G+K+
Sbjct: 378 RPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGK---MDPVAYRVKYTPHH-RTGDKWC 433
Query: 278 VWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVI 337
++P Y++ + D +TH +E + ++ PV +GRL++ +
Sbjct: 434 IYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAV 493
Query: 338 LSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNL 397
+SK K + + G WDDPRL T+ ALRRRG PEAI VG+ + T+ L
Sbjct: 494 VSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLL 553
Query: 398 AAINRKLVDPIANRYFFVADPVPMEVEGAP---EFIAKIPLHPDHPERGTRELRFTPGKP 454
A R +++ A R V + + + + P ++P P +G ++ F P
Sbjct: 554 EACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADETKGFHQVPFAP--I 611
Query: 455 IYVSKDDLDLLKPGSFVRL---------KDLFNVEIVEVGEKIKAKFHSFEYEIARKNKW 505
+++ + D F RL + +E+ V + S E R +
Sbjct: 612 VFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVESLEVTCRRADAG 671
Query: 506 R----MIHWVPEGRPCEVIIPE--------GDELIVRKGLLEKDANVKAGEIV------- 546
IHWV + CEV + E D V G L D N+ + +V
Sbjct: 672 EKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFL-SDLNLASLHVVDAALVDC 730
Query: 547 -----------QFERFGFVRID 557
QFER G+ +D
Sbjct: 731 SVALAKPFDKFQFERLGYFSVD 752
>gb|AAG35495.1|AF130117_26 (AF130067) PRO2195 [Homo sapiens]
Length = 608
Score = 189 bits (476), Expect = 6e-47
Identities = 145/502 (28%), Positives = 227/502 (44%), Gaps = 53/502 (10%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
G+V TRF P P+G H+G+A+A ++ YAK G LRFDDT+P+ + E F+ I
Sbjct: 95 GQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPE--KEEAKFFTAIC 152
Query: 158 EDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRD 217
+ + WLG P ++ YASD + Y +A ELI+ G AYVC + E+ + +P P RD
Sbjct: 153 DMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQRGEELKG--HNTLPSPWRD 210
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
P+E L + M G++ EGEA +R+K + D A R+ P+H R G+K+
Sbjct: 211 RPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGK---MDPVAYRVKYTPHH-RTGDKWC 266
Query: 278 VWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVI 337
++P Y++ + D +TH +E + ++ PV +GRL++ +
Sbjct: 267 IYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAV 326
Query: 338 LSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNL 397
+SK K + + G WDDPRL T+ ALRRRG PEAI VG+ + T+ L
Sbjct: 327 VSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLL 386
Query: 398 AAINRKLVDPIANRYFFVADPVPMEVEGAP---EFIAKIPLHPDHPERGTRELRFTPGKP 454
A R +++ A R V + + + + P ++P P +G ++ F P
Sbjct: 387 EACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADETKGFHQVPFAP--I 444
Query: 455 IYVSKDDLDLLKPGSFVRL---------KDLFNVEIVEVGEKIKAKFHSFEYEIARKNKW 505
+++ + D F RL + +E+ V + S E R +
Sbjct: 445 VFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVESLEVTCRRADAG 504
Query: 506 R----MIHWVPEGRPCEVIIPE--------GDELIVRKGLLEKDANVKAGEIV------- 546
IHWV + CEV + E D V G L D N+ + +V
Sbjct: 505 EKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFL-SDLNLASLHVVDAALVDC 563
Query: 547 -----------QFERFGFVRID 557
QFER G+ +D
Sbjct: 564 SVALAKPFDKFQFERLGYFSVD 585
>sp|O67271|SYE_AQUAE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437732|pir||D70405 glutamate--tRNA ligase (EC
6.1.1.17) - Aquifex aeolicus >gi|2983664|gb|AAC07230.1|
(AE000729) glutamyl-tRNA synthetase [Aquifex aeolicus]
Length = 473
Score = 155 bits (389), Expect = 9e-37
Identities = 102/298 (34%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
KV TRFAP+P G HLGNAR AI SY +A+ G F+LR +DTDP+ + E + EM+IE
Sbjct: 3 KVKTRFAPSPTGYLHLGNARTAIFSYLFARHNNGGFVLRIEDTDPERSKKE--YEEMLIE 60
Query: 159 DLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKF----RELRDKGIP-- 212
DL+WLGI DE S+R ++Y +Y +L++ G AY C C PE+ E R KGIP
Sbjct: 61 DLKWLGIDWDEFYRQSERFDIYREYVNKLLESGHAYPCFCTPEELEKEREEARKKGIPYR 120
Query: 213 ----CPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVR--DWPALRIVDN 266
C H + ++ K +K E + DL + A+ D+ IV +
Sbjct: 121 YSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDLIKGHIAINTDDFGDFVIVRS 180
Query: 267 PNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTV 326
P YNF +DD +G+TH+ RG++H N +Q IYE G+ P
Sbjct: 181 DGS----------PTYNFVVVVDDALMGITHVIRGEDHIPNTPKQILIYEALGFPVPKFA 230
Query: 327 HHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVG 384
H VIL + +++ G ++RA R G +PEA+ + +G
Sbjct: 231 H------LPVILGEDRSKLSKRHGAV---------SVRAYREEGYMPEALFNYLCLLG 273
>gb|AAB62548.1| (AF005489) glutaminyl-tRNA synthetase [Nosema locustae]
Length = 305
Score = 145 bits (361), Expect = 2e-33
Identities = 96/308 (31%), Positives = 143/308 (46%), Gaps = 58/308 (18%)
Query: 110 GAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDE 169
G HLGNA+A L+++YA+ + G LRFDDT+PK + + +Y II+D+EWLG KP
Sbjct: 1 GYLHLGNAKALNLNFKYAEKHNGYVFLRFDDTNPKNENMK--YYRAIIKDVEWLGFKPKF 58
Query: 170 IVYASDRLELYYKYAEELIKMG-----------------------------------KAY 194
+ +SD E ++ + LI+ G K Y
Sbjct: 59 VTASSDYFEKMIEFGKALIREGKAYVCHLPLDDVRKYRRSVGVVHHGRQQYPAAEVLKKY 118
Query: 195 V--------CTCKPEKFRELRDKGIP------------CPHRDEPVEVQLERWRKMLNGE 234
+ C C R P P RD PV+V L +++M++G
Sbjct: 119 IRSGTKHPECMCPSNCEIHARHSVSPEEEITSELHFKLSPFRDRPVDVNLTLFQEMIDGR 178
Query: 235 YKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELG 294
+KEG AV+R+K D + NP + D A R+++ P H G +Y+V+P Y+FA I D
Sbjct: 179 WKEGTAVLRLKMDTDSTNPFMLDLVAFRVIEKP-HSLTGTRYKVYPSYDFALCICDSLED 237
Query: 295 VTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLG 354
VTH F +E + +++ + G PV RL++ +LSK K +K IE
Sbjct: 238 VTHSFCSREFLTRQEPYKWLLKNLGLYMPVQWEFSRLNMPDALLSKRKIKKLIENKVIKS 297
Query: 355 WDDPRLGT 362
DDP L T
Sbjct: 298 IDDPSLPT 305
>gb|AAB62550.1| (AF005491) glutaminyl-tRNA synthetase [Trichomonas vaginalis]
Length = 250
Score = 141 bits (353), Expect = 2e-32
Identities = 83/253 (32%), Positives = 130/253 (50%), Gaps = 3/253 (1%)
Query: 110 GAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDE 169
G H+GNA+A IL + A GG +RFDDT+P ++ E F E I +D+ WLG +
Sbjct: 1 GYLHIGNAKAMILDFGLAATKGGHCYMRFDDTNPGKEKVE--FIEGIKKDVHWLGFDYWK 58
Query: 170 IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRK 229
I + SD ++ Y++A +LI G AYV E+ +E R+K +P P RD + +
Sbjct: 59 ITHTSDYFDILYQFALKLIDEGLAYVDHQTKEEVKEYREKLMPSPWRDRDPKESRRLFEL 118
Query: 230 MLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAID 289
M G Y+ EA +R+K D + +P +RD A RI + HP G+K+ ++P Y+++ +
Sbjct: 119 MRCGYYEPSEATLRLKMDYKNASPNMRDQVAYRIKYH-EHPHTGDKWCIYPTYDYSHCVI 177
Query: 290 DHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEE 349
D +TH E ++ + PV RL++ ++SK K + +
Sbjct: 178 DSLENITHSLCTLEFQNRRDSYYWVLDALKIYKPVVWEFSRLNLTNTVMSKRKLQTLVYN 237
Query: 350 GKYLGWDDPRLGT 362
GWDDPRL T
Sbjct: 238 NYVNGWDDPRLPT 250
>sp|Q9ZCT8|SYE2_RICPR GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA LIGASE 2) (GLURS 2)
>gi|7437744|pir||H71667 glutamate--tRNA ligase (EC
6.1.1.17) (gltX2) RP623 - Rickettsia prowazekii
>gi|3861166|emb|CAA15066.1| (AJ235272) GLUTAMYL-TRNA
SYNTHETASE (gltX2) [Rickettsia prowazekii]
Length = 470
Score = 140 bits (350), Expect = 3e-32
Identities = 99/318 (31%), Positives = 152/318 (47%), Gaps = 41/318 (12%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
++TRFAP+P G H+G+AR A+ +Y +A+ GKF LR +DTD K E + E I
Sbjct: 4 IITRFAPSPTGFLHIGSARTALFNYLFARHNNGKFFLRIEDTDKKRSTKEAV--EAIFSG 61
Query: 160 LEWLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDE 218
L+WLG+ D E+++ S R LY + A +L+K GKAY C + E+ + R + + +D+
Sbjct: 62 LKWLGLNWDGEVIFQSKRNSLYKEAALKLLKEGKAYYCFTRQEEIAKQRQQAL----KDK 117
Query: 219 PVEVQLERWRKMLNGEY-KEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYR 277
+ WR Y + + V+R+K + + D IV +H R
Sbjct: 118 QHFIFNSEWRDKGPSTYPADIKPVIRLKVP-REGSITIHDTLQGEIVIENSHIDDMILIR 176
Query: 278 V--WPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH----HGRL 331
Y A +DDH++G+THI RG +H N RQ IY FG+E P H HG
Sbjct: 177 TDGTATYMLAVIVDDHDMGITHIIRGDDHLTNAARQIAIYHAFGYEVPNMTHIPLIHG-- 234
Query: 332 SIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSD-- 389
+G LSK G+E K +G+ LPE++ ++ +G D
Sbjct: 235 -ADGTKLSKRHGALGVEAYKDMGY----------------LPESLCNYLLRLGWSHGDDE 277
Query: 390 -----ATVSWDNLAAINR 402
+ W NLA++ +
Sbjct: 278 IISMNQAIEWFNLASLGK 295
>sp|P22249|SYE_BACST GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|68553|pir||SYBSES glutamate--tRNA ligase (EC
6.1.1.17) - Bacillus stearothermophilus
>gi|143004|gb|AAA22494.1| (M55072) transfer RNA-Gln
synthetase [Bacillus stearothermophilus]
Length = 489
Score = 137 bits (342), Expect = 3e-31
Identities = 93/304 (30%), Positives = 147/304 (47%), Gaps = 65/304 (21%)
Query: 104 FAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWL 163
+AP+P G H+G AR A+ +Y +A+ +GGK I+R +DTD ++R + +E+L+WL
Sbjct: 9 YAPSPTGHLHIGGARTALFNYLFARHHGGKMIVRIEDTD--IERNVEGGEQSQLENLQWL 66
Query: 164 GIKPDEIV---------YASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK----G 210
GI DE V ++RL++Y KY +EL++ G AY C C PE+ R++ G
Sbjct: 67 GIDYDESVDKDGGYGPYRQTERLDIYRKYVDELLEQGHAYKCFCTPEELEREREEQRAAG 126
Query: 211 IPCPH------------------RDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPN 252
I P + +P ++L K+ G+ E + +VR K +
Sbjct: 127 IAAPQYSGKCRRLTPEQVAELEAQGKPYTIRL----KVPEGKTYEVDDLVRGKVTFESKD 182
Query: 253 PAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQR 312
+ DW + K P YNFA IDDH + ++H+FRG+EH N +Q
Sbjct: 183 --IGDWVIV-------------KANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQL 227
Query: 313 YIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGIL 372
+YEYFGWE P H + L ++ RK + + D+ + + + G L
Sbjct: 228 MVYEYFGWEPPQFAH--------LTLIVNEQRKKLSKR-----DESIIQFVSQYKELGYL 274
Query: 373 PEAI 376
PEA+
Sbjct: 275 PEAM 278
>pir||PC4398 glutamine--tRNA ligase (EC 6.1.1.18) - Vibrio cholerae (strain
non-O1) (fragment)
Length = 234
Score = 136 bits (340), Expect = 5e-31
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 8/203 (3%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRF P P+G H+G+A++ L++ A+ Y G+ LRFDDT+P+ + E + E I +D
Sbjct: 28 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPEKENLE--YVESIKKD 85
Query: 160 LEWLGIK-PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
+ WLG E+ Y+SD + Y+YA ELI+ G AYV PE+ RE R + G P
Sbjct: 86 VTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPEQIREYRGTLTEPGKHSP 145
Query: 215 HRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGN 274
+RD VE L + KM GE+ EG+A +R K D+ +RD P L V H + G+
Sbjct: 146 YRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRD-PVLYRVRFAEHHQTGD 204
Query: 275 KYRVWPLYNFASAIDDHELGVTH 297
K+ ++P+Y+F I D G+TH
Sbjct: 205 KWCIYPMYDFTHCISDALEGITH 227
>sp|Q9ZFA3|SYE_RHOSH GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|11271644|pir||T46860 probable glutamate--tRNA ligase
(EC 6.1.1.17) [imported] - Rhodobacter sphaeroides
>gi|4185551|gb|AAD09123.1| (AF108766) glutamyl t-RNA
synthetase [Rhodobacter sphaeroides]
Length = 471
Score = 134 bits (333), Expect = 3e-30
Identities = 94/302 (31%), Positives = 136/302 (44%), Gaps = 51/302 (16%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
+P A VVTRFAP+P G H+G R A+ ++ YA+ G F+LR +DTD + PE
Sbjct: 1 MPAASDKPVVTRFAPSPTGYLHIGGGRTALFNWLYARGRKGTFLLRIEDTDRERSTPEAT 60
Query: 152 FYEMIIEDLEWLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
+ I+ L WLG+ D E+V R + + + A E+++ G AY C E+ R+
Sbjct: 61 --DAILRGLTWLGLDWDGEVVSQFARKDRHAEVAREMLERGAAYKCFSTQEEIEAFRESA 118
Query: 211 I----------------PCPHRDEPVEVQLERWRKMLNGEYKEGEAVVR--IKTDLNHPN 252
P H D P ++++ R GE V+ ++ + N
Sbjct: 119 RAEGRSTLFRSPWRDADPTSHPDAPFVIRMKAPRS--------GETVIEDEVQGTVRFQN 170
Query: 253 PAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQR 312
+ D LR P Y A +DDH++GVTH+ RG +H N RQ
Sbjct: 171 ETLDDMVVLRSDGTPT-------------YMLAVVVDDHDMGVTHVIRGDDHLNNAARQT 217
Query: 313 YIYEYFGWEYPVTVH----HGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRR 368
+YE GWE PV H HG +G LSK G+EE + +G+ P G L R
Sbjct: 218 MVYEAMGWEVPVWAHIPLIHGP---DGKKLSKRHGALGVEEYQAMGY--PAAGMRNYLAR 272
Query: 369 RG 370
G
Sbjct: 273 LG 274
>pir||A81337 glutamate--tRNA ligase (EC 6.1.1.17) Cj1288c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968720|emb|CAB73541.1| (AL139077) glutamyl-tRNA
synthetase [Campylobacter jejuni]
Length = 463
Score = 133 bits (331), Expect = 6e-30
Identities = 105/322 (32%), Positives = 153/322 (46%), Gaps = 47/322 (14%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TRFAP+P G H+G R A+ +Y YA+ GG F+LR +DTD +KR + IIE
Sbjct: 4 KLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTD--LKRNSKEATKAIIE 61
Query: 159 DLEWLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRD 217
+W G++ D E+ Y S+R +LY +Y ++L+ GKAY C E+ ELR K R
Sbjct: 62 AFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYMSKEELEELRAKQEAAKERP 121
Query: 218 EPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHP-------NPAVRDWPALRIVDNPNHP 270
R+R+ + E VVRIK + VR + A I+D+
Sbjct: 122 R----YDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFEDGVKGEVR-FKAEDIMDDFIIA 176
Query: 271 RAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH--- 327
R+ P YNF IDD +GV+ + RG +H N +Q +YE G++ P H
Sbjct: 177 RSDGT----PTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGFKIPKFFHVAM 232
Query: 328 -HGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLK 386
HG +G LSK + E K + GILP+A+ ++ +G
Sbjct: 233 IHGE---DGKKLSKRHGATDVMEYKEM----------------GILPQALLNFLVRLGWS 273
Query: 387 KSDATV-SWDNLAAINRKLVDP 407
D V S ++L +KL DP
Sbjct: 274 HGDDEVFSLEDL----KKLFDP 291
>sp|Q9X2I8|SYE2_THEMA GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA LIGASE 2) (GLURS 2)
>gi|7437741|pir||F72200 glutamate--tRNA ligase (EC
6.1.1.17) - Thermotoga maritima (strain MSB8)
>gi|4982461|gb|AAD36937.1|AE001824_6 (AE001824)
glutamyl-tRNA synthetase [Thermotoga maritima]
Length = 487
Score = 128 bits (318), Expect = 2e-28
Identities = 95/318 (29%), Positives = 146/318 (45%), Gaps = 55/318 (17%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V RFAP+P G H+G AR A+ ++ +A+ GGKFILR +DTD +R + + I+E
Sbjct: 25 VRVRFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTD--TERSSREYEQQILES 82
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L W G+ DE S+RLE+Y +YAE+L++ +AY E +
Sbjct: 83 LRWCGLDWDEGPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELFTT 142
Query: 211 IPCPH----RDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDN 266
PH + PV ++ K+L G+ + +K + N + D+ +
Sbjct: 143 YEYPHEYKEKGHPVTIKF----KVLPGKTSFEDL---LKGYMEFDNSTLEDFIIM----- 190
Query: 267 PNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTV 326
K +P YNFA +DDH + ++H+FRG++H N +Q IYE FGWE PV +
Sbjct: 191 --------KSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEAFGWEAPVFM 242
Query: 327 HHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLK 386
H +IL +T G ++ RR GIL A+ + +G +
Sbjct: 243 H------IPLILGSDRTPLSKRHG---------ATSVEHFRREGILSRALMNYLALLGWR 287
Query: 387 KSDATVSWDNLAAINRKL 404
V D + I KL
Sbjct: 288 -----VEGDEIFTIEEKL 300
>gb|AAF49463.1| (AE003527) CG4573 gene product [Drosophila melanogaster]
Length = 511
Score = 126 bits (313), Expect = 8e-28
Identities = 96/303 (31%), Positives = 138/303 (44%), Gaps = 40/303 (13%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
+V RFAP+P G HLG R A+ ++ YA+ GGKF+LR +DTD R P E ++E
Sbjct: 20 QVRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQ--TRLVPGASERLVE 77
Query: 159 DLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
DL W GI+ DE S R E+Y K EEL+ G AY C C + LR +
Sbjct: 78 DLLWAGIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLDLLRKE 137
Query: 210 GIPCPHRDEPVEVQLERWRKMLNGEY-----KEGEAVVRIK-TDLNHP-NPAVRDWPALR 262
+ R V + R + E K +R K TD P + +
Sbjct: 138 AL----RTRQVPRYDNKCRHLTTSEVDSLLAKGTPYCIRFKLTDHEEPLDDLIYGKVHHN 193
Query: 263 IVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY 322
+ DN P K +P Y+FA+ +DDH +G+TH+ RG E + T+ +Y+ FGW+
Sbjct: 194 VSDNEGDP-VVMKSDQFPTYHFANVVDDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQP 252
Query: 323 PVTVHHGRL-SIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELII 381
P H L + +G LSK + GI+ R RG P+A+ ++
Sbjct: 253 PKFGHLPLLVNADGTKLSKRQGDIGIQH----------------FRERGYFPQALVNYVV 296
Query: 382 EVG 384
G
Sbjct: 297 SAG 299
>dbj|BAB03828.1| (AP001507) glutamyl-tRNA synthetase [Bacillus halodurans]
Length = 485
Score = 126 bits (313), Expect = 8e-28
Identities = 100/342 (29%), Positives = 164/342 (47%), Gaps = 51/342 (14%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
+V RFAP+P G H+G AR+A+ +Y +AK GG F+LR +DTD R E +++
Sbjct: 4 EVRVRFAPSPTGHLHIGGARSALFNYLFAKNQGGMFVLRIEDTDQ--ARNVGQAKEKLLD 61
Query: 159 DLEWLGIKPDEIV--------YAS-DRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
L+WLG++ DE + Y+S +RL++Y K+ E+L+ GKAY C E+ R+
Sbjct: 62 SLKWLGVEWDESIDVGGEYGPYSSMERLDIYKKHIEQLLNEGKAYYCYMTEEELEAEREA 121
Query: 210 GI------PCPHRDEPVEVQLER------WRKMLNGEYKEGEAVV---RIKTDLNHPNPA 254
I RD + + R + ++ EG+ + ++ +++ +
Sbjct: 122 QIARGEMPKYSGRDRDLTEEQRRAYEAKGIKPVVRFRVPEGQVIKIQDAVRGEVSFESDG 181
Query: 255 VRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYI 314
+ D+ R K V P+YNFA +DDH + ++H+ RG+EH N RQ +
Sbjct: 182 IGDFVIAR------------KDGV-PMYNFAVVVDDHLMKISHVIRGEEHLSNTPRQVML 228
Query: 315 YEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGI----EEGKYLGWDDPRLGTIRALRRRG 370
YE FGW+ P T H L + SK + I E+ K LG+ + AL
Sbjct: 229 YEAFGWDVP-TFAHASLILNPNRQKMSKRDESIIQFVEQYKELGYMPEAIVNFLALLGWS 287
Query: 371 ILPE----AIKELIIEVGLK---KSDATVSWDNLAAINRKLV 405
+ E +++EL + L+ K+ A D LA +N + +
Sbjct: 288 PVGEEEIFSLEELAAQFSLERVSKAPAVFDTDKLAWMNNQYI 329
>sp|P22250|SYE_BACSU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|68552|pir||SYBSET glutamate--tRNA ligase (EC
6.1.1.17) gltX - Bacillus subtilis
>gi|143006|gb|AAA22495.1| (M55073) transfer RNA-Gln
synthetase [Bacillus subtilis] >gi|289282|gb|AAA21796.1|
(L14580) glutamyl-tRNA synthetase [Bacillus subtilis]
>gi|467480|dbj|BAA05326.1| (D26185) glutamyl-tRNA
synthetase [Bacillus subtilis]
>gi|2632359|emb|CAB11868.1| (Z99104) glutamyl-tRNA
synthetase [Bacillus subtilis]
>gi|2653659|gb|AAC31971.1| (U49789) glutamyl-tRNA
synthetase [Bacillus subtilis]
Length = 483
Score = 125 bits (310), Expect = 2e-27
Identities = 93/306 (30%), Positives = 148/306 (47%), Gaps = 52/306 (16%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
+V R+AP+P G H+GNAR A+ +Y +A+ GGKFI+R +DTD KR + +
Sbjct: 4 EVRVRYAPSPTGHLHIGNARTALFNYLFARNQGGKFIIRVEDTDK--KRNIEGGEQSQLN 61
Query: 159 DLEWLGIKPDEIV---------YASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
L+WLGI DE V S+R ++Y Y EEL++ G AY C C E+ + R++
Sbjct: 62 YLKWLGIDWDESVDVGGEYGPYRQSERNDIYKVYYEELLEKGLAYKCYCTEEELEKEREE 121
Query: 210 GI--------PCPHRDEPVEVQ----LERWRKMLNGEYKEGEAVV---RIKTDLNHPNPA 254
I HRD E Q E + + EG+ + +K +++ +
Sbjct: 122 QIARGEMPRYSGKHRDLTQEEQEKFIAEGRKPSIRFRVPEGKVIAFNDIVKGEISFESDG 181
Query: 255 VRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYI 314
+ D+ ++ + G P YNFA AIDD+ + +TH+ RG++H N +Q I
Sbjct: 182 IGDFVIVK--------KDGT-----PTYNFAVAIDDYLMKMTHVLRGEDHISNTPKQIMI 228
Query: 315 YEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPE 374
Y+ FGW+ P H + L +++RK + + D+ + I + G LPE
Sbjct: 229 YQAFGWDIPQFGH--------MTLIVNESRKKLSKR-----DESIIQFIEQYKELGYLPE 275
Query: 375 AIKELI 380
A+ I
Sbjct: 276 ALFNFI 281
>pir||F82019 glutamate--tRNA ligase (EC 6.1.1.17) NMA0250 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7379012|emb|CAB83558.1| (AL162752) glutamyl-tRNA
synthetase [Neisseria meningitidis Z2491]
Length = 464
Score = 122 bits (303), Expect = 1e-26
Identities = 91/306 (29%), Positives = 138/306 (44%), Gaps = 45/306 (14%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRFAP+P G H+G R A+ S+ +A+ + G+F+LR +DTD E + +I++
Sbjct: 3 VKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDTDLARSTAESV--NIILDG 60
Query: 160 LEWLGI---KPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHR 216
++W+G+ D +VY + R + Y + EL++ G AY C C E+ +R+K
Sbjct: 61 MKWVGLNYDNADNVVYQTRRFDRYKEVIAELLEKGHAYYCYCSKEELEAMREKA-----E 115
Query: 217 DEPVEVQLERWRKMLNGEYKEGEA----VVRIKTDLNHPNPAVRDWPAL---------RI 263
E RWR E A VVR KT L+ V W L
Sbjct: 116 KEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLD----GVTRWADLVKGEISIPNEA 171
Query: 264 VDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYP 323
+D+ R+ P YNF +DD+++GVTH+ RG +H N +Q I + G P
Sbjct: 172 LDDLIIARSDGS----PTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINILKAIGATLP 227
Query: 324 VTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEV 383
+G L +IL+ E+GK + I GILPEA+ + +
Sbjct: 228 ---EYGHLP---MILN--------EQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARL 273
Query: 384 GLKKSD 389
G D
Sbjct: 274 GWAHGD 279
>sp|Q9X172|SYE1_THEMA GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA LIGASE 1) (GLURS 1)
>gi|7437742|pir||G72264 glutamate--tRNA ligase (EC
6.1.1.17) - Thermotoga maritima (strain MSB8)
>gi|4981911|gb|AAD36422.1|AE001789_7 (AE001789)
glutamyl-tRNA synthetase [Thermotoga maritima]
Length = 469
Score = 122 bits (302), Expect = 1e-26
Identities = 111/377 (29%), Positives = 164/377 (43%), Gaps = 79/377 (20%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V RFAP+P G H+G AR A+ ++ +A+ GKFILR +DTD ++R E + E ++E
Sbjct: 2 VRVRFAPSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTD--LERSEREYEEKLMES 59
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L WLG+ DE S+R+E+Y ++AE L+K GKAY PE+ E+R+K
Sbjct: 60 LRWLGLLWDEGPDVGGDHGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEMREKL 119
Query: 211 IP---CPHRDEPVEVQL---ERWR-------------KMLNGEYKEGEAVVRIKTDLNHP 251
+ PH + + + ER R KM +Y + V K ++
Sbjct: 120 LSEGKAPHYSQEMFEKFDTPERRREYEEKGLRPAVFFKMPRKDYVLNDVV---KGEVVFK 176
Query: 252 NPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQ 311
A+ D+ +R P YNFA +DD + +TH+ RG +H N RQ
Sbjct: 177 TGAIGDFVIMRS-------------NGLPTYNFACVVDDMLMEITHVIRGDDHLSNTLRQ 223
Query: 312 RYIYEYFGWEYPVTVHHGR-LSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRG 370
+YE F PV H L +G LSK +E A R G
Sbjct: 224 LALYEAFEKAPPVFAHVSTILGPDGKKLSKRHGATSVE----------------AFRDMG 267
Query: 371 ILPEAIKELIIEVG-----------LKKSDATVSWDNLAAINRKLVDP----IANRYFFV 415
LPEA+ + +G L++ ++ S D L+ N + DP N Y+
Sbjct: 268 YLPEALVNYLALLGWSHPEGKELLTLEELISSFSLDRLSP-NPAIFDPQKLKWMNGYYLR 326
Query: 416 ADPVPMEVEGAPEFIAK 432
P+ E A F K
Sbjct: 327 NMPIEKLAELAKPFFEK 343
>pir||A81247 glutamyl-tRNA synthetase NMB0003 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225228|gb|AAF40482.1| (AE002359) glutamyl-tRNA
synthetase [Neisseria meningitidis MC58]
Length = 464
Score = 121 bits (301), Expect = 2e-26
Identities = 91/306 (29%), Positives = 139/306 (44%), Gaps = 45/306 (14%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRFAP+P G H+G R A+ S+ +A+ + G+F+LR +DTD E + +I++
Sbjct: 3 VKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDTDLARSTAESV--NIILDG 60
Query: 160 LEWLGI---KPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHR 216
++W+G+ D +VY + R + Y + EL++ G AY C C E+ +R+K
Sbjct: 61 MKWVGLNYDNADNVVYQTRRFDRYKEVIAELLEKGHAYYCYCSKEELEAMREKA-----E 115
Query: 217 DEPVEVQLERWR----KMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPAL---------RI 263
E RWR K L + + VVR KT L+ V W L
Sbjct: 116 KEGSATYDRRWRPEVGKTLPEIPSDVQPVVRFKTPLD----GVTKWTDLVKGEISIPNEA 171
Query: 264 VDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYP 323
+D+ RA P YNF +DD+++GVTH+ RG +H N +Q I + P
Sbjct: 172 LDDLIIARADGT----PTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINILKAIDANLP 227
Query: 324 VTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEV 383
+G L +IL+ E+GK + I GILPEA+ + +
Sbjct: 228 ---EYGHLP---MILN--------EQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARL 273
Query: 384 GLKKSD 389
G D
Sbjct: 274 GWAHGD 279
>pir||G82104 glutamyl-tRNA synthetase VC2214 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9656771|gb|AAF95358.1| (AE004293)
glutamyl-tRNA synthetase [Vibrio cholerae]
Length = 509
Score = 121 bits (300), Expect = 3e-26
Identities = 97/339 (28%), Positives = 155/339 (45%), Gaps = 49/339 (14%)
Query: 67 KLMEIYPEYFEKKEEKKEEKKGLPPLPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEY 126
+++E P++ ++K L K + V TRFAP+P G H+G AR A+ S+ Y
Sbjct: 12 RVLEYRPKFRMLSSQQKN-------LTKVIQMTVKTRFAPSPTGYLHVGGARTALYSWLY 64
Query: 127 AKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDE-IVYASDRLELYYKYAE 185
AK GG+F+LR +DTD ++R + IIE + WLG++ DE Y + R + Y + +
Sbjct: 65 AKSQGGEFVLRIEDTD--LERSTQAAVDAIIEGMTWLGLEWDEGPYYQTKRFDRYNQVID 122
Query: 186 ELIKMGKAYVCTCKPEKFRELR-----DKGIPCPHRDEPVEVQLERWRKMLNGEYKEGE- 239
+L+ GKAY C E E+R +K +P + P K +N KEGE
Sbjct: 123 QLLAEGKAYKCYAPKELLDEIRAEQEANKEMPRYDANHPK-------IKAVNDAAKEGEP 175
Query: 240 AVVRIKTDLNHP---NPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVT 296
+R + + +R + I ++ + P YNF +DD ++G++
Sbjct: 176 CCIRFRNPKEGSVVFDDQIRG--RIEIRNDQLDDLIIRRTDGTPTYNFCVVVDDVDMGIS 233
Query: 297 HIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGR-LSIEGVILSKSKTRKGIEEGKYLGW 355
H+ RG++H N RQ IY+ G P H L +G LSK
Sbjct: 234 HVIRGEDHINNTPRQINIYKAMGATIPTFAHCAMILGDDGAKLSK--------------- 278
Query: 356 DDPRLGTIRALRRR--GILPEAIKELIIEVGLKKSDATV 392
R G + ++ R G LPEA+ ++ +G D +
Sbjct: 279 ---RHGAVSVMQYRDDGYLPEALLNYLVRLGWGHGDQEI 314
>sp|P43818|SYE_HAEIN GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|1074139|pir||B64059 glutamate--tRNA ligase (EC
6.1.1.17) - Haemophilus influenzae (strain Rd KW20)
>gi|1573240|gb|AAC21940.1| (U32713) glutamyl-tRNA
synthetase (gltX) [Haemophilus influenzae Rd]
Length = 480
Score = 120 bits (299), Expect = 3e-26
Identities = 92/310 (29%), Positives = 141/310 (44%), Gaps = 52/310 (16%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
KV TRFAP+P G H+G AR A+ S+ YAK G+F+LR +DTD ++R P IIE
Sbjct: 14 KVRTRFAPSPTGYLHVGGARTALYSWLYAKHNNGEFVLRIEDTD--LERSTPEATAAIIE 71
Query: 159 DLEWLGIKPDE-IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR---------- 207
+EWL + + Y + R + Y + +E+I+ G AY C C E ELR
Sbjct: 72 GMEWLNLPWEHGPYYQTKRFDRYNQVIDEMIEQGLAYRCYCTKEHLEELRHTQEQNKEKP 131
Query: 208 --DKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVD 265
D+ H P E + R++ G +A VR + ++++ + D +R D
Sbjct: 132 RYDRHCLHDHNHSPDEPHVVRFKNPTEGSVVFDDA-VRGRIEISN---SELDDLIIRRTD 187
Query: 266 NPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVT 325
P YNF +DD ++G+TH+ RG++H N RQ I + G P
Sbjct: 188 GS------------PTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINILKAIGAPIPTY 235
Query: 326 VHHGRLS-IEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRR--GILPEAIKELIIE 382
H ++ +G LSK R G + ++ R G LPEA+ ++
Sbjct: 236 AHVSMINGDDGQKLSK------------------RHGAVSVMQYRDDGYLPEALINYLVR 277
Query: 383 VGLKKSDATV 392
+G D +
Sbjct: 278 LGWGHGDQEI 287
>sp|P27000|SYE_THETH GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|94711|pir||S21172 glutamate--tRNA ligase (EC
6.1.1.17) - Thermus aquaticus >gi|1311358|pdb|1GLN|
Mol_id: 1; Molecule: Glutamyl-Trna Synthetase; Chain:
Null >gi|48242|emb|CAA45854.1| (X64557) glutamate--tRNA
ligase [Thermus thermophilus]
Length = 468
Score = 120 bits (297), Expect = 6e-26
Identities = 96/303 (31%), Positives = 141/303 (45%), Gaps = 38/303 (12%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
VVTR AP+P G H+G A A+ +Y +A+ GG+FI+R +DTD R P E I+
Sbjct: 2 VVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDR--ARYVPGAEERILAA 59
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK- 209
L+WLG+ DE S+RL LY KYAEEL+K G AY PE+ ++R +
Sbjct: 60 LKWLGLSYDEGPDVAAPTGPYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKEK 119
Query: 210 -GIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPN 268
G R+ P E ER R+ GE V+R+K + + + DN
Sbjct: 120 GGYDGRARNIPPEEAEERARR---GE----PHVIRLKVPRPGTTEVKDELRGVVVYDNQE 172
Query: 269 HPRAG-NKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH 327
P K +P Y+ A+ +DDH +GVT + R +E + +Y FGWE P H
Sbjct: 173 IPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYH 232
Query: 328 HGRL-SIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLK 386
L + + +SK K+ ++ W + G LPEA++ + +G
Sbjct: 233 MPLLRNPDKTKISKRKSHTSLD------W----------YKAEGFLPEALRNYLCLMGFS 276
Query: 387 KSD 389
D
Sbjct: 277 MPD 279
>gb|AAA61403.1| (L39015) mitochondrial glutamyl-tRNA synthetase [Saccharomyces
cerevisiae]
Length = 536
Score = 120 bits (297), Expect = 6e-26
Identities = 94/315 (29%), Positives = 141/315 (43%), Gaps = 48/315 (15%)
Query: 88 GLPPLPKAEKGKVV-----------TRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFIL 136
GL PL K+ K + TRFAP+P G HLG+ R A+ +Y A+ G+F+L
Sbjct: 22 GLSPLKKSLLSKKIKEDIHPSLPVRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLL 81
Query: 137 RFDDTDPK--VKRPEPIFYEMIIEDLEWLGIKPDEI-VYASDRLELYYKYAEELIKMGKA 193
R +DTD K ++ E YE+ L+W I DE + S+R +Y KY + L+ GKA
Sbjct: 82 RLEDTDQKRLIEGAEENIYEI----LKWCNINYDETPIKQSERKLIYDKYVKILLSSGKA 137
Query: 194 YVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA------VVRIKTD 247
Y C C E+ +LR + P +R L E + + VR K+
Sbjct: 138 YRCFCSKERLNDLRHSAM---ELKPPSMASYDRCCAHLGEEEIKSKLAQGIPFTVRFKSP 194
Query: 248 LNHP------NPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRG 301
+P + + P + D K P Y+ A+ +DDH +G+TH+ RG
Sbjct: 195 ERYPTFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRG 254
Query: 302 QEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLG 361
+E + + +Y FGW P +H L+ G K RKG
Sbjct: 255 EEWLPSTPKHIALYNAFGWACPKFIHIPLLTTVGD--KKLSKRKGDM------------- 299
Query: 362 TIRALRRRGILPEAI 376
+I L+R+G+LPEA+
Sbjct: 300 SISDLKRQGVLPEAL 314
>gi|6324540 Mitochondrial glutamyl-tRNA synthetase; Mse1p [Saccharomyces
cerevisiae] >gi|2507428|sp|P48525|SYEM_YEAST
GLUTAMYL-TRNA SYNTHETASE, MITOCHONDRIAL (GLUTAMATE--TRNA
LIGASE) (GLURS) >gi|2131264|pir||S66716 glutamate--tRNA
ligase (EC 6.1.1.17), mitochondrial - yeast
(Saccharomyces cerevisiae) >gi|1419825|emb|CAA99033.1|
(Z74775) ORF YOL033w [Saccharomyces cerevisiae]
Length = 536
Score = 120 bits (297), Expect = 6e-26
Identities = 94/315 (29%), Positives = 141/315 (43%), Gaps = 48/315 (15%)
Query: 88 GLPPLPKAEKGKVV-----------TRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFIL 136
GL PL K+ K + TRFAP+P G HLG+ R A+ +Y A+ G+F+L
Sbjct: 22 GLSPLKKSLLSKKIKEDIHPSLPVRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLL 81
Query: 137 RFDDTDPK--VKRPEPIFYEMIIEDLEWLGIKPDEI-VYASDRLELYYKYAEELIKMGKA 193
R +DTD K ++ E YE+ L+W I DE + S+R +Y KY + L+ GKA
Sbjct: 82 RLEDTDQKRLIEGAEENIYEI----LKWCNINYDETPIKQSERKLIYDKYVKILLSSGKA 137
Query: 194 YVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEA------VVRIKTD 247
Y C C E+ +LR + P +R L E + + VR K+
Sbjct: 138 YRCFCSKERLNDLRHSAM---ELKPPSMASYDRCCAHLGEEEIKSKLAQGIPFTVRFKSP 194
Query: 248 LNHP------NPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRG 301
+P + + P + D K P Y+ A+ +DDH +G+TH+ RG
Sbjct: 195 ERYPTFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRG 254
Query: 302 QEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLG 361
+E + + +Y FGW P +H L+ G K RKG
Sbjct: 255 EEWLPSTPKHIALYNAFGWACPKFIHIPLLTTVGD--KKLSKRKGDM------------- 299
Query: 362 TIRALRRRGILPEAI 376
+I L+R+G+LPEA+
Sbjct: 300 SISDLKRQGVLPEAL 314
>sp|P04805|SYE_ECOLI GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|68550|pir||SYECET glutamate--tRNA ligase (EC
6.1.1.17) - Escherichia coli >gi|41596|emb|CAA45391.1|
(X63976) glutamyl-tRNA synthetase [Escherichia coli]
>gi|148256|gb|AAA65715.1| (M13687) glutamyl-tRNA
synthetase [Escherichia coli] >gi|1788743|gb|AAC75457.1|
(AE000328) glutamate tRNA synthetase, catalytic subunit
[Escherichia coli K12] >gi|1799814|dbj|BAA16272.1|
(D90869) glutamate--tRNA ligase (EC 6.1.1.17)
[Escherichia coli]
Length = 471
Score = 118 bits (292), Expect = 2e-25
Identities = 88/315 (27%), Positives = 143/315 (44%), Gaps = 61/315 (19%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TRFAP+P G H+G AR A+ S+ +A+ +GG+F+LR +DTD + PE I E I++
Sbjct: 2 KIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAI--EAIMD 59
Query: 159 DLEWLGIKPDE-IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIP----- 212
+ WL ++ DE Y + R + Y +++++ G AY C C E+ LR++ +
Sbjct: 60 GMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKP 119
Query: 213 -----CPHR------DEPVEVQLERWRKMLNGEYKEGEAVV--RIKTDLNHPNPAVRDWP 259
C H DEP V+ +EG V +I+ + N + D
Sbjct: 120 RYDGRCRHSHEHHADDEPCVVRF--------ANPQEGSVVFDDQIRGPIEFSNQELDDL- 170
Query: 260 ALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFG 319
+R D P YNF +DD ++ +TH+ RG++H N RQ I +
Sbjct: 171 IIRRTDGS------------PTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK 218
Query: 320 WEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRR--GILPEAIK 377
PV H ++ ++GK L R G + ++ R G LPEA+
Sbjct: 219 APVPVYAHVSMIN--------------GDDGKKL---SKRHGAVSVMQYRDDGYLPEALL 261
Query: 378 ELIIEVGLKKSDATV 392
++ +G D +
Sbjct: 262 NYLVRLGWSHGDQEI 276
>sp|P96551|SYE1_HELPY GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA LIGASE 1) (GLURS 1)
>gi|7437737|pir||D64579 glutamate--tRNA ligase (EC
6.1.1.17) - Helicobacter pylori (strain 26695)
>gi|2313587|gb|AAD07544.1| (AE000562) glutamyl-tRNA
synthetase (gltX) [Helicobacter pylori 26695]
Length = 463
Score = 117 bits (291), Expect = 3e-25
Identities = 97/315 (30%), Positives = 144/315 (44%), Gaps = 23/315 (7%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
+VTRFAP+P G H+G R AI +Y +A+ GKF LR +DTD + R IIE
Sbjct: 4 IVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTD--LSRNSIEAANAIIEA 61
Query: 160 LEWLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDE 218
+W+G++ D EI+Y S R E+Y +Y ++L+ KAY C E+ LR++ R E
Sbjct: 62 FKWVGLEYDGEILYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQ---KARKE 118
Query: 219 PVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHP---NPAVRDWPALRIVDNPNHPRAGNK 275
R+R K E VVRIK N N V+ +++ N +
Sbjct: 119 TPRYD-NRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKG--EVKVNTNELDDFIIAR 175
Query: 276 YRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGR-LSIE 334
P YNF IDD +G+T + RG +H N +Q +Y+ ++ P H L+ E
Sbjct: 176 SDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEE 235
Query: 335 GVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRG--------ILPEAIKELIIEVGLK 386
G LSK + + + +G+ L + L R G + + EL L
Sbjct: 236 GQKLSKRHGATNVMDYQEMGYLKEAL--VNFLARLGWSYQDKEVFSMQELLELFDPKDLN 293
Query: 387 KSDATVSWDNLAAIN 401
S + SW L +N
Sbjct: 294 SSPSCFSWHKLNWLN 308
>sp|Q9ZLZ7|SYE1_HELPJ GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA LIGASE 1) (GLURS 1)
>gi|7437734|pir||D71932 glutamate--tRNA ligase (EC
6.1.1.17) - Helicobacter pylori (strain J99)
>gi|4154965|gb|AAD06009.1| (AE001477) GLUTAMYL-TRNA
SYNTHETASE [Helicobacter pylori J99]
Length = 463
Score = 116 bits (287), Expect = 8e-25
Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
+VTRFAP+P G H+G R AI +Y +A+ GKF LR +DTD + R I+E
Sbjct: 4 IVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTD--LSRNSIEAANAIVEA 61
Query: 160 LEWLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDE 218
+W+G++ D EI+Y S R E+Y +Y ++L+ KAY C E+ LR++ R E
Sbjct: 62 FKWVGLEHDGEILYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQ---KARKE 118
Query: 219 PVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHP---NPAVRDWPALRIVDNPNHPRAGNK 275
R+R K E VVRIK N N V+ +++ N +
Sbjct: 119 TPRYD-NRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKG--EVKVNTNEIDDFIIAR 175
Query: 276 YRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGR-LSIE 334
P YNF IDD +G+T + RG +H N +Q +Y+ ++ P H L+ E
Sbjct: 176 SDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEE 235
Query: 335 GVILSKSKTRKGIEEGKYLGW 355
G LSK + + + +G+
Sbjct: 236 GQKLSKRHGATNVMDYQEMGY 256
>gb|AAB62549.1| (AF005490) glutamyl-tRNA synthetase [Nosema locustae]
Length = 248
Score = 114 bits (283), Expect = 2e-24
Identities = 87/256 (33%), Positives = 124/256 (47%), Gaps = 11/256 (4%)
Query: 110 GAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDE 169
G HLG+A+AA+L+ YA GG I+RFDDT+P +R E F + I+ DL L K
Sbjct: 1 GYLHLGHAKAALLNNHYAVENGGTLIVRFDDTNPSKERSE--FEDAILSDLRVLASKSLL 58
Query: 170 IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWRK 229
+ + SD + + LIK GKAY + ++ R RD+G+ R E L + +
Sbjct: 59 LSHTSDYFDRIIELGRTLIKEGKAYCDNTERDQMRVERDEGVESECRRISAEDNLLIFDE 118
Query: 230 MLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAID 289
M+ G + E VR K D+ N A+RD P + ++ H R GN R+ L N +
Sbjct: 119 MVRGGMR--EYCVRAKIDMKSSNKAMRD-PVIFRSNDECHYRVGN--RLQNLSNLRLCVS 173
Query: 290 DHEL--GVTHIFRGQEHAENETRQRYIYEYFG-WEYPVTVHHGRLSIEGVILSKSKTRKG 346
GVTH R E + + R+ E P V RL+ E +LSK K +
Sbjct: 174 SCRFLEGVTHTLRTNEFRDRNAQYRWFVESLRLGGVPRIVDFARLNFEDTVLSKRKLKYF 233
Query: 347 IEEGKYLGWDDPRLGT 362
+E K + WDDP L T
Sbjct: 234 VEH-KGIAWDDPHLPT 248
>sp|P57173|SYE_BUCAI GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|10038756|dbj|BAB12791.1| (AP001118) glutamyl-tRNA
synthetase [Buchnera sp. APS]
Length = 467
Score = 114 bits (282), Expect = 3e-24
Identities = 89/309 (28%), Positives = 141/309 (44%), Gaps = 49/309 (15%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
KV TRFAP+P G H+G+ R A+ S+ +A+ + GKF+LR +DTD + R E I + I
Sbjct: 2 KVKTRFAPSPTGNLHIGSIRTALYSWLFARHHNGKFVLRIEDTD--LVRSELISIDSIFN 59
Query: 159 DLEWLGIKPDEIVY-ASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGI------ 211
L+WLG+ DE Y + RL+ Y + +++ AY+C C ++ E+R K I
Sbjct: 60 GLKWLGLNWDEGPYFQTKRLDRYKEVINVMLEKEDAYICVCSCQELEEIRKKQIEKGNKP 119
Query: 212 --PCPHRDEPV-----EVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIV 264
P R+ + + + R++ L G+ K + +I+ ++ N + D ++
Sbjct: 120 RYPGTCRNLNIKNISNQNHVIRFKNPLFGKVKFQD---KIRGEIVFDNAELDD----LVI 172
Query: 265 DNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPV 324
N P YNF +DD ++ +TH+ RG++H N RQ I + PV
Sbjct: 173 QRSNG---------MPTYNFCVVVDDMDMKITHVIRGEDHISNTPRQINILNSLKVKIPV 223
Query: 325 TVHHGR-LSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEV 383
H L +G +SK K I E G LPEA+ II +
Sbjct: 224 YAHLSMILDEKGNKISKRKNAINIIE----------------YYENGFLPEALLNYIIRL 267
Query: 384 GLKKSDATV 392
G D +
Sbjct: 268 GWSYGDKEI 276
>sp|Q55778|SYE_SYNY3 GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437740|pir||S76583 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
>gi|1001692|dbj|BAA10429.1| (D64002) glutamyl-tRNA
synthetase [Synechocystis sp.]
Length = 483
Score = 113 bits (281), Expect = 4e-24
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 54/316 (17%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G AR A+ ++ +A+ GG FILR +DTD ++R + + E I
Sbjct: 3 VRVRIAPSPTGNLHIGTARTAVFNWLFARHTGGTFILRVEDTD--LERSKAEYTENIQSG 60
Query: 160 LEWLGIKPDE-IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----------- 207
L+WLG+ DE + + RL+ Y K ++L+ G AY C C E+ ++R
Sbjct: 61 LQWLGLNWDEGPFFQTQRLDHYRKAIQQLLDQGLAYRCYCTSEELEQMREAQKAKNQAPR 120
Query: 208 ------------DKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAV 255
++ + R + +++ R+++ + G+ VV +DL
Sbjct: 121 YDNRHRNLTPDQEQALRAEGRQPVIRFRIDDDRQIVWQDQIRGQ-VVWQGSDLG------ 173
Query: 256 RDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIY 315
D R +NP PLYN A +DD ++ +TH+ RG++H N +Q +Y
Sbjct: 174 GDMVIARASENPEEAFG------QPLYNLAVVVDDIDMAITHVIRGEDHIANTAKQILLY 227
Query: 316 EYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEA 375
E G P H +IL+ +EGK L D + +I R G LP+A
Sbjct: 228 EALGGAVPTFAH------TPLILN--------QEGKKLSKRD-GVTSIDDFRAMGFLPQA 272
Query: 376 IKELIIEVGLKKSDAT 391
I + +G D+T
Sbjct: 273 IANYMCLLGWTPPDST 288
>sp|Q06560|SYE_CHLPS GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|2126383|pir||JC5208 glutamate--tRNA ligase (EC
6.1.1.17) - Chlamydophila psittaci
>gi|1783380|gb|AAB41141.1| (U41759) glutamyl-tRNA
synthetase homolog [Chlamydophila caviae]
Length = 505
Score = 113 bits (281), Expect = 4e-24
Identities = 83/265 (31%), Positives = 128/265 (47%), Gaps = 24/265 (9%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G A A+ + +AK + GK ILR +DTD R + + + I
Sbjct: 6 VRVRVAPSPTGDPHVGTAYMALFNEIFAKRFNGKMILRIEDTDQTRSRDD--YEKNIFSA 63
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L+W GI+ DE S+R E+Y +YAE L+K AY C P++ E+R
Sbjct: 64 LQWCGIQWDEGPDIGGPHGPYRQSERTEIYREYAELLLKTDYAYKCFATPKELEEMRAVA 123
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEA-VVRIKTDLNHPNPAVRDWPALRIVDNPNH 269
+R + + +EG+ +R+K L + D+ R+V
Sbjct: 124 TTLGYRGGYDRRYRYLSPEEIEARTQEGQPYTIRLKVPLT-GECVLEDYCKGRVV----F 178
Query: 270 PRAGNKYRV------WPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYP 323
P A +V +P Y+FA+ +DDH +G+TH+ RG+E + + +YE FGWE P
Sbjct: 179 PWADVDDQVLMKSDGFPTYHFANVVDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEPP 238
Query: 324 VTVHHG-RLSIEGVILSKSKTRKGI 347
+ +H L+ +G LSK K I
Sbjct: 239 IFLHMPLLLNPDGTKLSKRKNPTSI 263
>sp|O86083|SYE_LACDE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|3450895|gb|AAC32611.1| (AF084366) glutamyl-tRNA
synthetase [Lactobacillus bulgaricus]
Length = 500
Score = 113 bits (279), Expect = 7e-24
Identities = 102/348 (29%), Positives = 154/348 (43%), Gaps = 41/348 (11%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ R+AP+P G H+GNAR A+ +Y +A+ G +LR +D D +R E IE
Sbjct: 5 KIRVRYAPSPTGHLHIGNARTALFNYLFARHNKGTLVLRIEDAD--TERNVEGGAESQIE 62
Query: 159 DLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
+L WLGI DE S+R ++Y KY ++L++ GKAY E+ R++
Sbjct: 63 NLHWLGIDWDEGPDIGGDYGPYKQSERKDIYQKYIDQLLEEGKAYYSFKTEEELEAQREE 122
Query: 210 ----GIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIK-----TDLNHPNPAVRDWPA 260
GI PH + + M E K+ +A R K ++ P +W
Sbjct: 123 QRAMGI-APH-------YVYEYEGMTTDEIKQAQAEARAKGLKPVVRIHIPEGVTYEWDD 174
Query: 261 LRI------VDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYI 314
+ D K P YNFA IDDH + ++H+ RG +H N +Q +
Sbjct: 175 IVKGHLSFESDTIGGDFVIQKRDGMPTYNFAVVIDDHLMEISHVLRGDDHISNTPKQLCV 234
Query: 315 YEYFGWEYPVTVHHGRL--SIEGVILSK--SKTRKGIEEGKYLGWDDPRLGTIRALRRRG 370
YE GWE PV H + S G LSK + IE+ + L T +L G
Sbjct: 235 YEALGWEAPVFGHMTLIINSATGKKLSKRDESVLQFIEQYRELVSCQKPCSTSSSL--LG 292
Query: 371 ILPEAIKELIIE-VGLKKSDATVSWDNLAAINRKLVDPIANRYFFVAD 417
P E+ + +K+ D + AA ++K +D + N+Y AD
Sbjct: 293 WSPVGESEIFSKREFIKQFDPARLSKSPAAFDQKKLDWVNNQYMKTAD 340
>gb|AAG28798.1|AC079374_1 (AC079374) glutaminyl-tRNA synthetase (glnrs), putative
[Arabidopsis thaliana]
Length = 729
Score = 112 bits (278), Expect = 1e-23
Identities = 134/560 (23%), Positives = 215/560 (37%), Gaps = 131/560 (23%)
Query: 54 EEVNSLSLDEQKAKLMEIYPEYFEKKEEK---KEEKKGLPPLPKAEKGKVVTRFAPNPDG 110
EE+N ++ Q + ++ E F K+ L K GKV TRF P P+G
Sbjct: 222 EELNPYTIFPQPEQNFMVHTEVFFSDGSILRCSNTKEVLDKHLKVTGGKVYTRFPPEPNG 281
Query: 111 AFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEWLGIKPDEI 170
H+G+A+A + + AK GG LR+DDT+P+ ++ E
Sbjct: 282 YLHIGHAKAMFVDFGLAKERGGCCYLRYDDTNPEAEKEE--------------------- 320
Query: 171 VYASDRLELYYKYAEELIK-MG-KAYVCTCKPEKFRELRDKGIPCPHRDEPVEVQLERWR 228
Y + EE++K MG + + T + F+EL D + R
Sbjct: 321 ---------YINHIEEIVKWMGWEPFKITYTSDYFQELYDLAVELIRR------------ 359
Query: 229 KMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAI 288
G A V +H HP+AG+K+ ++P Y++A
Sbjct: 360 ---------GHAYV------DHQFAP--------------HPKAGDKWCIYPSYDYAHCT 390
Query: 289 DDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIE 348
D +TH E ++ P + RL++ ++SK K I
Sbjct: 391 VDSLENITHSLCTLEFETRRASYYWLLHSLSLYMPYVWEYSRLNVTNTVMSKRKLNY-IV 449
Query: 349 EGKYL-GWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDAT-VSWDNLAAINRKLVD 406
KY+ GWDDPRL T+ LRRRG+ AI + +G+ +SD + + L R+ ++
Sbjct: 450 TNKYVDGWDDPRLLTLSGLRRRGVTSTAINAFVRGIGITRSDGSMIHVSRLEHHIREELN 509
Query: 407 PIANRYFFVADPVP-----MEVEGAPEFIAKIPLHPDHPERGTRELRFTP-GKPIYVSKD 460
A R V +P+ +E + E AK PD P + +Y+ +
Sbjct: 510 KTAPRTMVVLNPLKVVITNLESDKLIELDAK--RWPDAQNDDPSAFYKVPFSRVVYIDQS 567
Query: 461 DLDL--------LKPGSFVRLKDLF-----NVEIVEVGEKIKAKFHSFEYEIARKNKWR- 506
D + L PG V L+ F NV + E ++ + H+ EY+ +K+K +
Sbjct: 568 DFRMKDSKDYYGLAPGKSVLLRYAFPIKCTNVVFADDNETVR-EIHA-EYDPEKKSKPKG 625
Query: 507 MIHWVPEGRPCEV----------------------------IIPEGDELIVRKGLLEKDA 538
++HWV E P E I P +I +
Sbjct: 626 VLHWVAESSPGEEPIKVEVRLFEKLFNSENPAELNDAWLTDINPNSKMVISGAYAVSTLK 685
Query: 539 NVKAGEIVQFERFGFVRIDK 558
+ G+ QFER G+ +DK
Sbjct: 686 DAAVGDRFQFERLGYYAVDK 705
>pir||A36909 glutamyl-tRNA synthetase homolog gltX - Chlamydia psittaci
(fragment) >gi|289833|gb|AAA23122.1| (L13598)
glutamyl-tRNA synthetase [Chlamydophila psittaci]
Length = 370
Score = 112 bits (277), Expect = 1e-23
Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 24/265 (9%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G A A+ + +AK + GK ILR +DTD R + + + I
Sbjct: 8 VRVRVAPSPTGDPHVGTAYMALFNEIFAKRFNGKMILRIEDTDQTRSRDD--YEKNIFSA 65
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L+W GI+ DE S+R E+Y +YAE L+K AY C P++ E+R
Sbjct: 66 LKWCGIQWDEGPDIGGPYGPYRQSERTEIYREYAELLLKTDYAYKCFATPKELEEMRAVA 125
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEA-VVRIKTDLNHPNPAVRDWPALRIVDNPNH 269
+R + + +EG+ +R+K L + D+ R+V
Sbjct: 126 TTLGYRGGYDRRYRYLSPEEIEARTREGQPYTIRLKVPLT-GECVLDDYCKGRVV----F 180
Query: 270 PRAGNKYRV------WPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYP 323
P A +V +P Y+FA+ +DDH +G+TH+ RG+E + + +YE FGWE P
Sbjct: 181 PWADVDDQVLIKSDGFPTYHFANVVDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEAP 240
Query: 324 VTVHHG-RLSIEGVILSKSKTRKGI 347
+H L+ +G LSK K I
Sbjct: 241 TFLHMPLLLNPDGTKLSKRKNPTSI 265
>sp|P75114|SYE_MYCPN GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|2146134|pir||S73490 glutamate--tRNA ligase (EC
6.1.1.17) gltX - Mycoplasma pneumoniae (strain ATCC
29342) >gi|1673825|gb|AAB95812.1| (AE000017)
glutamyl-tRNA synthetase [Mycoplasma pneumoniae]
Length = 484
Score = 111 bits (276), Expect = 2e-23
Identities = 96/304 (31%), Positives = 136/304 (44%), Gaps = 39/304 (12%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TR+AP+P G H+G AR AI ++ AK + G+FI+R +DTD +R E +E
Sbjct: 3 KIRTRYAPSPTGYLHVGGARTAIFNFLLAKHFNGEFIIRIEDTD--TERNVEGGIESQLE 60
Query: 159 DLEWLGIKPDEIVY---------ASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
+L WLGI PDE +Y S +L Y K A EL+ G AY C C EK ++
Sbjct: 61 NLRWLGIIPDESIYNPGNYGPYIQSQKLATYKKLAYELVGKGLAYRCFCTKEKLE--HER 118
Query: 210 GIPCPHRDEPVEVQLERWRKMLNGEYK---EGEAVVRIKTDLNHP-----NPAVRDWPAL 261
+ H P L R + + + + + I+ +N N VR +
Sbjct: 119 QLALEHHQTP--KYLGTCRNLHSKHIQTNLDNQVPFTIRLKINQDAEFAWNDQVRG--KI 174
Query: 262 RIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWE 321
I N K YNFA IDDH++ +T + RG EH N Q I + G
Sbjct: 175 TIPGNSLTDIVLLKANGIATYNFAVVIDDHDMEITDVLRGAEHISNTAYQLAINQALG-- 232
Query: 322 YPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPR-LGTIRALRRRGILPEAIKELI 380
Y G LS VI+ KS GK L D + + I ++ G LPEA+ +
Sbjct: 233 YQRIPRFGHLS---VIVDKS--------GKKLSKRDTKTIQFIEQFKQEGYLPEAVVNFL 281
Query: 381 IEVG 384
+G
Sbjct: 282 ALLG 285
>pir||F81671 glutamyl-tRNA synthetase TC0730 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190759|gb|AAF39540.1| (AE002341)
glutamyl-tRNA synthetase [Chlamydia muridarum]
Length = 506
Score = 109 bits (269), Expect = 1e-22
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G A A+ + +A+ + GK ILR +DTD R + + + I
Sbjct: 6 VRVRVAPSPTGDPHVGTAYMALFNEVFARKFNGKMILRIEDTDQTRSRDD--YEKNIFSA 63
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L+W GI+ DE S+R E+Y KYAE L++ AY C P++ +E+R
Sbjct: 64 LKWCGIRWDEGPDIGGPYGPYRQSERTEIYKKYAEILLQTDYAYKCFATPQELQEMRAVA 123
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEA-----VVRIKTDLNHPNPAVRDWPALRIVD 265
+R R+R + E ++ E +R+K L + D R+V
Sbjct: 124 STLGYRGG----YDRRYRYLSAEEVRQREEQGQPYTIRLKVPLTGES-VFEDQCKGRVV- 177
Query: 266 NPNHPRAGNKYRV------WPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFG 319
P A +V +P Y+FA+ +DDH +G+TH+ RG+E + + +YE FG
Sbjct: 178 ---FPWADVDDQVLVKSDGFPTYHFANVVDDHLMGITHVLRGEEWLSSTPKHLLLYEAFG 234
Query: 320 WEYPVTVHHG-RLSIEGVILSKSKTRKGI 347
WE P H L+ +G LSK K I
Sbjct: 235 WEPPQFFHMPLLLNPDGSKLSKRKNPTSI 263
>sp|Q43768|SYE_HORVU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|1076718|pir||S51684 glutamate--tRNA ligase (EC
6.1.1.17) precursor - barley >gi|603849|emb|CAA58505.1|
(X83523) glutamate--tRNA ligase [Hordeum vulgare]
Length = 560
Score = 109 bits (269), Expect = 1e-22
Identities = 82/311 (26%), Positives = 140/311 (44%), Gaps = 54/311 (17%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
G V RFAP+P G H+G AR A+ +Y +A+ GGKF+LR +DTD ++R E ++
Sbjct: 42 GPVRVRFAPSPTGNLHVGGARTALFNYLFARSRGGKFVLRVEDTD--LERSTKKSEEAVL 99
Query: 158 EDLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRD 208
DL WLG+ DE S+R LY ++A++L++ G Y C C E+ ++++
Sbjct: 100 TDLSWLGLDWDEGPDIGGDFGPYRQSERNALYKEHAQKLMESGAVYRCFCSNEELEKMKE 159
Query: 209 KGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNP-----AVRDWPALRI 263
+R + V + +W + E ++ +L P V +L+I
Sbjct: 160 TA----NRMKIPPVYMGKWATASDAE---------VQQELEKGTPYTYRFRVPKEGSLKI 206
Query: 264 VDNPNHPRAGN----------KYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRY 313
D + N + P+YNF +DD + ++H+ R +EH N RQ
Sbjct: 207 NDLIRGEVSWNLNTLGDFVIMRSNGQPVYNFCVTVDDATMRISHVIRAEEHLPNTLRQAL 266
Query: 314 IYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILP 373
IY+ G+ P+ H +IL+ K++ G ++ + G LP
Sbjct: 267 IYKALGFAMPLFAH------VSLILAPDKSKLSKRHG---------ATSVGQYKEMGYLP 311
Query: 374 EAIKELIIEVG 384
+A+ + +G
Sbjct: 312 QAMVNYLALLG 322
>pir||E83254 glutamyl-tRNA synthetase PA3134 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9949247|gb|AAG06522.1|AE004737_8
(AE004737) glutamyl-tRNA synthetase [Pseudomonas
aeruginosa]
Length = 494
Score = 108 bits (268), Expect = 1e-22
Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 49/253 (19%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TR AP+P G H+G A A+ + +A+ +GG+FILR +DTD E + I +
Sbjct: 4 VRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQLRSTRES--EQQIYDA 61
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L WLGI+ DE S+R +Y KY++EL++ G A+ C C PE+ +R +
Sbjct: 62 LRWLGIEWDEGPDVGGPHGPYRQSERGHIYKKYSDELVEKGHAFTCFCTPERLDAVRAEQ 121
Query: 211 IP----------CPHRDEPVEVQLERWRKMLNGEY--------KEGEAVV--RIKTDLNH 250
+ C H + EVQ R++ GE EG VV ++ D+
Sbjct: 122 MARKETPRYDGHCMHLPKD-EVQ----RRLAAGESHVTRMKVPTEGVCVVPDMLRGDVEI 176
Query: 251 PNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETR 310
P + D L D P Y A+ +DDH +G+TH+ RG+E + +
Sbjct: 177 PWDRM-DMQVLMKADG------------LPTYFLANVVDDHLMGITHVLRGEEWLPSAPK 223
Query: 311 QRYIYEYFGWEYP 323
+YEYFGWE P
Sbjct: 224 LIKLYEYFGWEQP 236
>sp|Q43794|SYE_TOBAC GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|1084418|pir||S51685 glutamate--tRNA ligase (EC
6.1.1.17) - common tobacco >gi|603867|emb|CAA58506.1|
(X83524) glutamate--tRNA ligase [Nicotiana tabacum]
Length = 569
Score = 108 bits (268), Expect = 1e-22
Identities = 87/314 (27%), Positives = 141/314 (44%), Gaps = 60/314 (19%)
Query: 98 GKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMII 157
G V RFAP+P G H+G AR A+ +Y YA+ GGKFILR +DTD ++R E ++
Sbjct: 54 GDVRVRFAPSPTGNLHVGGARTALFNYLYARAKGGKFILRIEDTD--LERSTKESEEAVL 111
Query: 158 EDLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRD 208
DL WLG DE S+R LY ++AE+L++ G Y C C E+ ++++
Sbjct: 112 RDLSWLGPAWDEGPGIGGEYGPYRQSERNALYKQFAEKLLQSGHVYRCFCSNEELEKMKE 171
Query: 209 ----KGIP-------CPHRDEPVEVQLE-------RWRKMLNGEYKEGEAVVRIKTDLNH 250
K +P +E V +L R+R G K + I+ +++
Sbjct: 172 IAKLKQLPPVYTGRWASATEEEVVEELAKGTPYTYRFRVPKEGSLKIDDL---IRGEVSW 228
Query: 251 PNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETR 310
+ D+ +R P+YNF +DD + ++H+ R +EH N R
Sbjct: 229 NLDTLGDFVIMRSNGQ-------------PVYNFCVTVDDATMAISHVIRAEEHLPNTLR 275
Query: 311 QRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRG 370
Q IY+ G+ P H +S+ IL+ +++ G ++ R G
Sbjct: 276 QALIYKALGFPMP---HFAHVSL---ILAPDRSKLSKRHG---------ATSVGQFRDMG 320
Query: 371 ILPEAIKELIIEVG 384
LP+A+ + +G
Sbjct: 321 YLPQAMVNYLALLG 334
>pir||C82871 glutamyl-tRNA synthetase UU599 [imported] - Ureaplasma urealyticum
>gi|6899610|gb|AAF31013.1|AE002158_11 (AE002158)
glutamyl-tRNA synthetase [Ureaplasma urealyticum]
Length = 482
Score = 108 bits (266), Expect = 2e-22
Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 44/261 (16%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TR+AP+P G H+G AR A+ +Y AK YGG FI+R +DTD ++R ++
Sbjct: 2 KIRTRYAPSPTGYLHIGGARTALFNYLLAKAYGGDFIIRIEDTD--IERNVEGGINSQLD 59
Query: 159 DLEWLGIKPDEIV---------YASDRLELYYKYAEELIKMGKAYVCTCKPEKF---REL 206
L W+GI PDE + S++L+ Y K A +L+ KAY C C E+ REL
Sbjct: 60 FLAWMGIIPDESIRNPKAFGPYIQSEKLKHYEKLALDLVDQKKAYFCFCSKEQLDADREL 119
Query: 207 RDKGIPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNH--------------PN 252
+K P + L++ + + + + E +R+K + N P
Sbjct: 120 AEKSHQTPKYKRHC-LNLDK-KTIESNLLQNKEYTIRLKINENMEYSWDDLIRGKISIPG 177
Query: 253 PAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQR 312
A+ D L+ NK +YNFA IDD+E+ ++H+ RG+EH N Q
Sbjct: 178 SALTDPVILK----------SNKI---AMYNFAVVIDDYEMQISHVIRGEEHISNTPYQL 224
Query: 313 YIYEYFGWEYPVTVHHGRLSI 333
I + ++ + +G LSI
Sbjct: 225 AIAQALNYDI-TKIKYGHLSI 244
>dbj|BAB10273.1| (AB008266) glutamate-tRNA ligase [Arabidopsis thaliana]
>gi|11078546|gb|AAG29098.1|AF241841_1 (AF241841)
Glu-tRNA synthetase [Arabidopsis thaliana]
Length = 570
Score = 108 bits (266), Expect = 2e-22
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 45/262 (17%)
Query: 93 PKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIF 152
P G V RFAP+P G H+G AR A+ +Y +A+ GGKF+LR +DTD ++R
Sbjct: 47 PVNNGGSVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTD--LERSTRES 104
Query: 153 YEMIIEDLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKF 203
+++DL WLG+ DE S+R LY +YAE+L++ G Y C C E+
Sbjct: 105 EAAVLQDLSWLGLDWDEGPGVSGDFGPYRQSERNALYKQYAEKLLESGHVYRCFCSSEEL 164
Query: 204 RELRD----KGIP-------CPHRDEPVEVQLE-------RWRKMLNGEYKEGEAVVRIK 245
++++ K +P D +E +LE R+R G K + I+
Sbjct: 165 VKMKENAKLKQLPPVYTGKWATASDAEIEQELEKGTPFTYRFRVPKEGSLKINDL---IR 221
Query: 246 TDLNHPNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHA 305
++ + D+ +R P+YNF +DD + ++H+ R +EH
Sbjct: 222 GEVCWNLDTLGDFVVMRSNGQ-------------PVYNFCVTVDDATMAISHVIRAEEHL 268
Query: 306 ENETRQRYIYEYFGWEYPVTVH 327
N RQ IY+ + P H
Sbjct: 269 PNTLRQALIYKALKFPMPQFAH 290
>sp|Q9XCL6|SYE_PSEAE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|4928924|gb|AAD33773.1|AF139107_3 (AF139107)
glutamyl-tRNA synthetase [Pseudomonas aeruginosa]
Length = 494
Score = 107 bits (265), Expect = 3e-22
Identities = 80/253 (31%), Positives = 120/253 (46%), Gaps = 49/253 (19%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TR AP+P G H+G A A+ + +A+ +GG+FILR +DTD E + I +
Sbjct: 4 VRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQLRSTRES--EQQIYDA 61
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L WLGI+ DE S+R +Y +Y++EL++ G A+ C C PE+ +R +
Sbjct: 62 LRWLGIEWDEGPDVGGPHGPYRQSERGHIYKRYSDELVEKGHAFTCFCTPERLDAVRAEQ 121
Query: 211 IP----------CPHRDEPVEVQLERWRKMLNGEY--------KEGEAVV--RIKTDLNH 250
+ C H + EVQ R++ GE EG VV ++ D+
Sbjct: 122 MARKETPRYDGHCMHLPKD-EVQ----RRLAAGESHVTRMKVPTEGVCVVPDMLRGDVEI 176
Query: 251 PNPAVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETR 310
P + D L D P Y A+ +DDH +G+TH+ RG+E + +
Sbjct: 177 PWDRM-DMQVLMKADG------------LPTYFLANVVDDHLMGITHVLRGEEWLPSAPK 223
Query: 311 QRYIYEYFGWEYP 323
+YEYFGWE P
Sbjct: 224 LIKLYEYFGWEQP 236
>pir||SYRZET glutamate--tRNA ligase (EC 6.1.1.17) - Rhizobium meliloti
>gi|717082|gb|AAC35209.1| (M27221) glutamyl-tRNA
synthetase [Sinorhizobium meliloti]
Length = 484
Score = 107 bits (265), Expect = 3e-22
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G A A+ +Y +AK +GGKFILR +DTD R P F + +++
Sbjct: 6 VRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGKFILRIEDTD--ATRSTPEFEKKVLDA 63
Query: 160 LEWLGIK---------PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L+W G++ P SDR ++Y Y E+++ G + C C PE+ ++R+
Sbjct: 64 LKWCGLEWSEGPDIGGPYGPYRQSDRKDIYKPYVEKIVANGHGFRCFCTPERLEQMREAQ 123
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEA-VVRIKT--------------DLNHPNPAV 255
+ + L + + GE VVR+K D+ P AV
Sbjct: 124 RAAGKPPKYDGLCLSLSAEEVTSRVDAGEPHVVRMKIPTEGSCKFRDGVYGDVEIPWEAV 183
Query: 256 RDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIY 315
D L D P Y+ A+ +DDH + +TH+ RG+E + + IY
Sbjct: 184 -DMQVLLKADG------------MPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIY 230
Query: 316 EYFGWEYPVTVHHGRL-SIEGVILSKSKTRKGIEEGKYLGW 355
+Y G E PV +H + + + LSK K I LG+
Sbjct: 231 QYLGLEPPVFMHLSLMRNADKSKLSKRKNPTSISYYTALGY 271
>sp|P15189|SYE_RHIME GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
Length = 485
Score = 107 bits (265), Expect = 3e-22
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G A A+ +Y +AK +GGKFILR +DTD R P F + +++
Sbjct: 6 VRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGKFILRIEDTD--ATRSTPEFEKKVLDA 63
Query: 160 LEWLGIK---------PDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L+W G++ P SDR ++Y Y E+++ G + C C PE+ ++R+
Sbjct: 64 LKWCGLEWSEGPDIGGPYGPYRQSDRKDIYKPYVEKIVANGHGFRCFCTPERLEQMREAQ 123
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEA-VVRIKT--------------DLNHPNPAV 255
+ + L + + GE VVR+K D+ P AV
Sbjct: 124 RAAGKPPKYDGLCLSLSAEEVTSRVDAGEPHVVRMKIPTEGSCKFRDGVYGDVEIPWEAV 183
Query: 256 RDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIY 315
D L D P Y+ A+ +DDH + +TH+ RG+E + + IY
Sbjct: 184 -DMQVLLKADG------------MPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIY 230
Query: 316 EYFGWEYPVTVHHGRL-SIEGVILSKSKTRKGIEEGKYLGW 355
+Y G E PV +H + + + LSK K I LG+
Sbjct: 231 QYLGLEPPVFMHLSLMRNADKSKLSKRKNPTSISYYTALGY 271
>sp|Q9ZLJ1|SYE2_HELPJ GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA LIGASE 2) (GLURS 2)
>gi|7437733|pir||B71913 glutamate--tRNA ligase (EC
6.1.1.17) - Helicobacter pylori (strain J99)
>gi|4155131|gb|AAD06161.1| (AE001491) GLUTAMYL-TRNA
SYNTHETASE [Helicobacter pylori J99]
Length = 439
Score = 106 bits (263), Expect = 6e-22
Identities = 91/297 (30%), Positives = 137/297 (45%), Gaps = 29/297 (9%)
Query: 103 RFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEW 162
RFAP+P G H+GN RAAI +Y AK F++R +DTD K + E E I+E L+
Sbjct: 3 RFAPSPTGDMHIGNLRAAIFNYIVAKQQNKPFLIRIEDTD-KERNIEGKDRE-ILEILKL 60
Query: 163 LGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEV 222
+GI D++VY S ++ + + AE+L+K KA+ C E ++K + P
Sbjct: 61 MGISWDKLVYQSHNIDYHREMAEKLLKENKAFYCYASAEFLEREKEK---AKNEKRPFR- 116
Query: 223 QLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALR--IVDNPNHPRAGNKYR--V 278
L+ W + + K VVR+K PN AV A++ + P+ + R
Sbjct: 117 YLDEWATL--EKDKNHAPVVRLKA----PNHAVSFNDAIKKEVKFEPDELDSFVLLRQDK 170
Query: 279 WPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVIL 338
P YNFA A DD ++ I RG++H N +Q I + G P+ H + ++
Sbjct: 171 SPTYNFACACDDLLYEISLIIRGEDHVSNTPKQILIQQALGSNDPIVYAHLPIILDETSG 230
Query: 339 SKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWD 395
K R +E + W L +G LPEAI +I +G K S D
Sbjct: 231 KKMSKR---DEASSVKW----------LLNQGFLPEAIANYLITIGNKVPKEVFSLD 274
>sp|P53662|SYE_MYCPU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|1363457|pir||S49391 GltX protein - Mycoplasma
pulmonis >gi|496154|gb|AAA65629.1| (L25415) glutamyl
tRNA synthetase [Mycoplasma pulmonis]
Length = 468
Score = 106 bits (262), Expect = 7e-22
Identities = 90/268 (33%), Positives = 126/268 (46%), Gaps = 41/268 (15%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TR+AP+P G H+G AR A+ +Y AK Y G FI+R +DTD VKR IE
Sbjct: 3 KLRTRYAPSPTGYLHIGGARTALFNYLLAKHYNGDFIIRIEDTD--VKRNIADGEASQIE 60
Query: 159 DLEWLGI-------KPDE---IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRD 208
+L+WL I KP+E S +LE Y K A ELI+ G AY E+ E +
Sbjct: 61 NLKWLNIEANESPLKPNEKYGPYRQSQKLEKYLKIAHELIEKGYAYKAYDNSEELEEQKK 120
Query: 209 K----GIPC--PHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKT----DLNHPNPAVR-- 256
G+ RD + E+ ++ +G Y + T DL N AV
Sbjct: 121 HSEKLGVASFRYQRDFLKISEEEKQKRDASGAYSIRVICPKNTTYQWDDLVRGNIAVNSN 180
Query: 257 ---DWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRY 313
DW ++ D +P YNFA IDD ++ ++HI RG+EH N +Q
Sbjct: 181 DIGDWIIIKSDD-------------YPTYNFAVVIDDIDMEISHILRGEEHITNTPKQMM 227
Query: 314 IYEYFGWEYPVTVHHGRL-SIEGVILSK 340
IY+Y P+ H + ++EG LSK
Sbjct: 228 IYDYLNAPKPLFGHLTIITNMEGKKLSK 255
>sp|O84451|SYE_CHLTR GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437728|pir||F71513 glutamate--tRNA ligase (EC
6.1.1.17) - Chlamydia trachomatis (serotype D, strain
UW3/Cx) >gi|3328877|gb|AAC68044.1| (AE001318)
Glutamyl-tRNA Synthetase [Chlamydia trachomatis]
Length = 506
Score = 106 bits (261), Expect = 9e-22
Identities = 82/271 (30%), Positives = 126/271 (46%), Gaps = 36/271 (13%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G A A+ + +A+ Y G+ ILR +DTD R + + I
Sbjct: 6 VRVRVAPSPTGDPHVGTAYMALFNEVFARKYNGQMILRIEDTDQTRSRDD--YEANIFSA 63
Query: 160 LEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKG 210
L+W GI+ DE S+R E+Y KYAE L++ AY C P++ +E+R
Sbjct: 64 LKWCGIRWDEGPDVGGAYGPYRQSERTEIYKKYAEILLQTDCAYKCFATPQELQEMRAVA 123
Query: 211 IPCPHRDEPVEVQLERWRKMLNGEYKEGEA-----VVRIKTDLNHPNP--------AVRD 257
+R R+R + E ++ E +R+K L + V
Sbjct: 124 STLGYRGG----YDRRYRYLSPEEVRQREEQGQPYTIRLKVPLTGESVFEDQCKGCVVFP 179
Query: 258 WPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEY 317
W VD+ ++ +P Y+FA+ +DDH +G+TH+ RG+E + + +YE
Sbjct: 180 WAD---VDDQVLVKSDG----FPTYHFANVVDDHLMGITHVLRGEEWLSSTPKHLLLYEA 232
Query: 318 FGWEYPVTVHHG-RLSIEGVILSKSKTRKGI 347
FGWE P H L+ +G LSK K I
Sbjct: 233 FGWEPPQFFHMPLLLNPDGSKLSKRKNPTSI 263
>sp|P45631|SYE_AZOBR GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|2181175|emb|CAA67900.1| (X99587) glutamine tRNA
synthase [Azospirillum brasilense]
Length = 446
Score = 105 bits (260), Expect = 1e-21
Identities = 93/321 (28%), Positives = 138/321 (42%), Gaps = 56/321 (17%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V FAP+P G H+GN R A++++ +A+ GG F++R DDTD + +PE + E I D
Sbjct: 3 VAVPFAPSPTGLLHVGNVRLALVNWLFARKAGGNFLVRLDDTDEERSKPE--YAEGIERD 60
Query: 160 LEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPE----KFRELRDKGIPCPH 215
L WLG+ D SDR + A L G+ Y C PE K L +G P P
Sbjct: 61 LTWLGLTWDRFARESDRYGATDEVAAALKASGRLYPCYETPEELNLKRASLSSQGRP-PI 119
Query: 216 RDE-------------PVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALR 262
D E + WR L E+ E ++ ++ A+ D P L
Sbjct: 120 YDRAALRLGDADRARLEAEGRKPHWRFKL--EHTPVEWTDLVRGPVHFEGSALSD-PVLI 176
Query: 263 IVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY 322
D PLY S +DD +L +TH+ RG++H N Q I+E G
Sbjct: 177 AEDGR------------PLYTLTSVVDDADLAITHVIRGEDHLANTAVQIQIFEAVGGAV 224
Query: 323 PVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRR---GILPEAIKEL 379
PV H + L T +G+ + RLG++ R GI P A+ L
Sbjct: 225 PVFAH--------LPLLTDATGQGLSK---------RLGSLSVASLREEEGIEPMALASL 267
Query: 380 IIEVGLKKS-DATVSWDNLAA 399
+ ++G + + ++ D L A
Sbjct: 268 LAKLGTSDAIEPRLTLDELVA 288
>sp|P47700|SYE_MYCGE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|1361516|pir||A64251 glutamate--tRNA ligase (EC
6.1.1.17) - Mycoplasma genitalium
>gi|3845057|gb|AAC72482.1| (U39728) glutamyl-tRNA
synthetase (gltX) [Mycoplasma genitalium]
Length = 484
Score = 105 bits (260), Expect = 1e-21
Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 37/303 (12%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TR+AP+P G H+G R AI ++ AK + G+FI+R +DTD + E I + +
Sbjct: 3 KIRTRYAPSPTGYLHVGGTRTAIFNFLLAKHFNGEFIIRIEDTDTERNIKEGINSQ--FD 60
Query: 159 DLEWLGIKPDEIVY---------ASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
+L WLG+ DE VY S +L +Y K A +LI+ AY C C EK R +
Sbjct: 61 NLRWLGVIADESVYNPGNYGPYLQSQKLAVYKKLAFDLIEKNLAYRCFCSKEKLESDRKQ 120
Query: 210 GIPCPHRDEPV--EVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPAL-----R 262
I H+ + +K+ N K +R+K + N A W L
Sbjct: 121 AIN-NHKTPKYLGHCRNLHSKKITNHLEKNDPFTIRLKIN----NEAEYSWNDLVRGQIT 175
Query: 263 IVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY 322
I + K YNFA IDD+++ +T + RG EH N Q IY+ G++
Sbjct: 176 IPGSALTDIVILKANGVATYNFAVVIDDYDMEITDVLRGAEHISNTAYQLAIYQALGFKR 235
Query: 323 PVTVHHGRLSIEGVILSKSKTRKGIEEGKYLG-WDDPRLGTIRALRRRGILPEAIKELII 381
H + ++ E GK L D+ I +++G LPEA+ +
Sbjct: 236 IPRFGHLSVIVD-------------ESGKKLSKRDEKTTQFIEQFKQQGYLPEALLNFLA 282
Query: 382 EVG 384
+G
Sbjct: 283 LLG 285
>gb|AAA61907.1| (U17699) glutamyl tRNA synthetase [Azospirillum brasilense]
Length = 451
Score = 105 bits (260), Expect = 1e-21
Identities = 96/326 (29%), Positives = 140/326 (42%), Gaps = 61/326 (18%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V RFAP+P G H+GN R A++++ +A+ GG F+LR DDTD + +PE + E I D
Sbjct: 3 VAVRFAPSPTGLLHVGNVRLALVNWLFARKAGGNFLLRLDDTDEERSKPE--YAEGIERD 60
Query: 160 LEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPE----KFRELRDKGIPCPH 215
L WLG+ D SDR Y + A L G+ Y C PE K L +G P P
Sbjct: 61 LTWLGLTWDRFARESDRYGRYDEVAAALKASGRLYPCYETPEELNLKRASLVSQGRP-PI 119
Query: 216 RDEPV-------------EVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALR 262
D E + WR L E+ E ++ ++ A+ D P L
Sbjct: 120 YDRAALRLGDADRARLESEGRKRHWRFKL--EHTPVEWTDLVRGPVHFEGAALSD-PVLI 176
Query: 263 IVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYF---- 318
D PLY S +DD +L +TH+ RG++H N Q I+E
Sbjct: 177 REDGR------------PLYTLTSVVDDADLAITHVIRGEDHVANTAVQIQIFEALTNSE 224
Query: 319 -GWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRR---GILPE 374
G PV H + L T +G+ + RLG++ R GI P
Sbjct: 225 GGGVVPVFAH--------LPLLTDATGQGLSK---------RLGSLSVASLREEEGIEPM 267
Query: 375 AIKELIIEVGLKKS-DATVSWDNLAA 399
A+ L+ ++G + + ++ D L A
Sbjct: 268 ALASLLAKLGTSDAIEPRLTLDELVA 293
>sp|O51345|SYE_BORBU GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7437735|pir||C70146 glutamate--tRNA ligase (EC
6.1.1.17) gltX - Lyme disease spirochete
>gi|2688265|gb|AAC66742.1| (AE001142) glutamyl-tRNA
synthetase (gltX) [Borrelia burgdorferi]
Length = 490
Score = 105 bits (260), Expect = 1e-21
Identities = 91/295 (30%), Positives = 135/295 (44%), Gaps = 49/295 (16%)
Query: 103 RFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEW 162
R+AP+P G H+G R A+ +Y +AK GGKF+LR +DTD PE + L+W
Sbjct: 6 RYAPSPTGLQHIGGIRTALFNYFFAKSCGGKFLLRIEDTDQSRYSPEA--ENDLYSSLKW 63
Query: 163 LGIKPDE--IV---YA----SDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPC 213
LGI DE +V YA S R +Y +YA+ LI+ G AY C C PE+ R K I
Sbjct: 64 LGISFDEGPVVGGDYAPYVQSQRSAIYKQYAKYLIESGHAYYCYCSPERLE--RIKKIQN 121
Query: 214 PHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRD------------WPAL 261
++ P +R + L+ E E + +IK + P D W
Sbjct: 122 INKMPP---GYDRHCRNLSNEEVENALIKKIKPVVRFKIPLEGDTSFDDILLGRITWANK 178
Query: 262 RIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWE 321
I +P ++ P Y+ A+ +DD+ + +TH+ R QE + +Y+ F W+
Sbjct: 179 DISPDPVILKSDG----LPTYHLANVVDDYLMKITHVLRAQEWVSSGPLHVLLYKAFKWK 234
Query: 322 YPVTVHHGR-LSIEGVILSK----SKTRKGIEEG----------KYLGW--DDPR 359
P+ H + +G LSK + R+ IE+G LGW DD R
Sbjct: 235 PPIYCHLPMVMGNDGQKLSKRHGSTALRQFIEDGYLPEAIINYVTLLGWSYDDKR 289
>sp|O25360|SYE2_HELPY GLUTAMYL-TRNA SYNTHETASE 2 (GLUTAMATE--TRNA LIGASE 2) (GLURS 2)
>gi|7437736|pir||C64600 glutamate--tRNA ligase (EC
6.1.1.17) - Helicobacter pylori (strain 26695)
>gi|2313763|gb|AAD07704.1| (AE000578) glutamyl-tRNA
synthetase (gltX) [Helicobacter pylori 26695]
Length = 439
Score = 103 bits (254), Expect = 6e-21
Identities = 90/297 (30%), Positives = 136/297 (45%), Gaps = 29/297 (9%)
Query: 103 RFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLEW 162
RFAP+P G H+GN RAAI +Y AK F++R +DTD K + E E I+E L+
Sbjct: 3 RFAPSPTGDMHIGNLRAAIFNYIVAKQQYKPFLIRIEDTD-KERNIEGKDQE-ILEILKL 60
Query: 163 LGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEPVEV 222
+GI D++VY S ++ + + AE+L+K KA+ C E ++K + P
Sbjct: 61 MGISWDKLVYQSHNIDYHREMAEKLLKENKAFYCYASAEFLEREKEK---AKNEKRPFRY 117
Query: 223 QLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALR--IVDNPNHPRAGNKYR--V 278
+ W + + K VVR+K PN AV A++ + P+ + R
Sbjct: 118 S-DEWATL--EKDKHHAPVVRLKA----PNHAVSFNDAIKKEVKFEPDELDSFVLLRQDK 170
Query: 279 WPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVIL 338
P YNFA A DD ++ I RG++H N +Q I + G P+ H + ++ V
Sbjct: 171 SPTYNFACACDDLLYKISLIIRGEDHVSNTPKQILIQQALGSNDPIVYAHLPIILDEVSG 230
Query: 339 SKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWD 395
K R +E + W L +G LP AI +I +G K S D
Sbjct: 231 KKMSKR---DEASSVKW----------LLNQGFLPVAIANYLITIGNKVPKEVFSLD 274
>pir||T32582 hypothetical protein T07A9.2 - Caenorhabditis elegans
>gi|2702358|gb|AAB92000.1| (AF036706) strong similarity
to class-I aminoacyl-tRNA synthetases; most similar to
glutaminyl-tRNA synthetases [Caenorhabditis elegans]
Length = 474
Score = 101 bits (249), Expect = 2e-20
Identities = 90/315 (28%), Positives = 137/315 (42%), Gaps = 54/315 (17%)
Query: 97 KGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMI 156
K V RFAP+P G H+G R A +Y +AK YGG FILR +DTD I
Sbjct: 8 KQNVRVRFAPSPTGHLHIGGLRTAFFNYLFAKKYGGDFILRIEDTDRT---------RFI 58
Query: 157 IEDLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR 207
L + + PDE S RLE+Y A LI G AY C C + LR
Sbjct: 59 YSSLNFYNLLPDEGPREGGKFGPYEQSKRLEIYRNAAYRLIDSGHAYRCFCSENRLDLLR 118
Query: 208 DKG-----IP-----CPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRD 257
IP C + V++E+ NGE + V+R K D +
Sbjct: 119 KTAEKRGEIPKYDRKCANLSSRDAVKMEQ-----NGE----KFVIRFKLDKQNVQFHDEV 169
Query: 258 WPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEY 317
+ ++ + + P K +P Y+ A+ IDD ++ ++H+ RG E + + +Y+
Sbjct: 170 FGSVNQFIDESDP-VLLKSDGFPTYHLANVIDDRKMEISHVIRGMEWLSSTGKHTILYKA 228
Query: 318 FGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIK 377
F W P VH LS+ ++ S +K ++ ++ + +LG LPEA+
Sbjct: 229 FNWTPPKFVH---LSL--IMRSATKKLSKRDKDAFVSYYSEQLGA---------LPEAVL 274
Query: 378 ELIIE--VGLKKSDA 390
L+I G++ DA
Sbjct: 275 NLMIRNGAGIRNFDA 289
>pir||H75514 glutamyl-tRNA synthetase - Deinococcus radiodurans (strain R1)
>gi|6458171|gb|AAF10063.1|AE001907_9 (AE001907)
glutamyl-tRNA synthetase [Deinococcus radiodurans]
Length = 525
Score = 100 bits (247), Expect = 4e-20
Identities = 88/323 (27%), Positives = 139/323 (42%), Gaps = 46/323 (14%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
L A VTR AP+P G H+G A + ++ A+ GG+FILR +DTD R P
Sbjct: 42 LMSAPSSPRVTRIAPSPTGDPHVGTAYIGLFNHTLARQSGGRFILRVEDTDR--NRYVPD 99
Query: 152 FYEMIIEDLEWLGIKPDEI---------VYASDRLELYYKYAEELIKMGKAYVCTCKPEK 202
+ I + ++WL + PDE S+R +LY YA +L++ G AY ++
Sbjct: 100 SEKRIFQMMQWLNLTPDESPLQGGPNGPYRQSERFDLYGDYARQLVQSGHAYYAFETSDE 159
Query: 203 FRELRDKG------IPCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHP---NP 253
LR++ I P RD + ++ GE AV+R+K D + N
Sbjct: 160 LAALREEAQKAGHVIAIPSRDLGA---AQAQARVDAGE----PAVIRLKVDRDGETVVND 212
Query: 254 AVRDWPALRIVDNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRY 313
+RD + + + K +P Y+ A+ +DD + VTH+ R +E +
Sbjct: 213 LLRD--PIHFANKEIDDKVLLKADGFPTYHLANVVDDRLMQVTHVVRAEEWITSTPIHVL 270
Query: 314 IYEYFGWEYPVTVHHGRL-SIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGIL 372
+Y FGW PV H L + + +SK K +E W + +G L
Sbjct: 271 LYRAFGWPEPVFAHMPLLRNADKSKISKRKNPTSVE------W----------YQNQGFL 314
Query: 373 PEAIKELIIEVGLKKSDATVSWD 395
PEA+ + +G D +D
Sbjct: 315 PEAMLNFLATMGWTHPDGQEIFD 337
>pir||C82757 glutamyl-tRNA synthetase XF0822 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9105724|gb|AAF83632.1|AE003922_2
(AE003922) glutamyl-tRNA synthetase [Xylella fastidiosa]
Length = 467
Score = 100 bits (246), Expect = 5e-20
Identities = 84/305 (27%), Positives = 129/305 (41%), Gaps = 53/305 (17%)
Query: 102 TRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDLE 161
TRFAP+P G H+G AR A+ + A+ G+F+LR +DTD +R + I+ ++
Sbjct: 5 TRFAPSPTGYLHIGGARTALYCWLEARRRNGQFLLRIEDTDR--ERSTQAAIDAILHAMD 62
Query: 162 WLGIKPD-EIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGI--------- 211
WLG+ D VY + R+E Y + A L+ GKAY + +R+ +
Sbjct: 63 WLGLDYDAPPVYQTQRIERYNQVAARLLAEGKAYYAYDSKDTLNAMREAALRTGEKPRYN 122
Query: 212 ------PCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAVRDWPALRIVD 265
P+RD+P V R++ G + IK + N + D LR
Sbjct: 123 GAAREANLPYRDDPNRV--IRFKNPHTGTVAFDDL---IKGRIQIANSELDDMVILR--- 174
Query: 266 NPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVT 325
P+ +P YNFA +DD ++ +T + RG +H N RQ +Y G P
Sbjct: 175 -PDG---------YPTYNFAVVVDDWDMNITEVIRGDDHINNTPRQINLYHALGAPLPTF 224
Query: 326 VHHGR-LSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVG 384
H L +G LSK R G + + R G LP A+ ++ +G
Sbjct: 225 AHLPMILDEQGAKLSK---RTGAAD-------------VMQYRDAGYLPHALINYLVRLG 268
Query: 385 LKKSD 389
D
Sbjct: 269 WSHGD 273
>sp|Q9ZDK3|SYE1_RICPR GLUTAMYL-TRNA SYNTHETASE 1 (GLUTAMATE--TRNA LIGASE 1) (GLURS 1)
>gi|7437743|pir||G71688 glutamate--tRNA ligase (EC
6.1.1.17) (gltX1) RP325 - Rickettsia prowazekii
>gi|3860885|emb|CAA14785.1| (AJ235271) GLUTAMYL-TRNA
SYNTHETASE (gltX1) [Rickettsia prowazekii]
Length = 447
Score = 99.8 bits (245), Expect = 7e-20
Identities = 72/243 (29%), Positives = 113/243 (45%), Gaps = 29/243 (11%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
KV+TRFAP+P G H+GN R A+L++ YAK + GKFILRFDDTD ++R + + I
Sbjct: 3 KVITRFAPSPTGMLHVGNIRVALLNWLYAKKHNGKFILRFDDTD--LERSKQKYKNDIER 60
Query: 159 DLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELR----DKGIPCP 214
DL++L I D+ R+ Y++ LI + Y C E+ R KG+P
Sbjct: 61 DLKFLNINWDQTFNQLSRVSRYHEIKNLLINKKRLYACYETKEELELKRKLQLSKGLPPI 120
Query: 215 H-------RDEPVEVQLERWRKMLNGEYKEGEAVV---RIKTDLNHPNPAVRDWPALRIV 264
+ ++ ++ +E+ RK + E + IK ++ + + D +R
Sbjct: 121 YDRASLNLTEKQIQKYIEQGRKPHYRFFLSYEPISWFDMIKGEIKYDGKTLSDPIVIRAD 180
Query: 265 DNPNHPRAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPV 324
+ Y S IDD + +THI RG++H N Q ++E PV
Sbjct: 181 GSMT-------------YMLCSVIDDIDYDITHIIRGEDHVSNTAIQIQMFEALNKIPPV 227
Query: 325 TVH 327
H
Sbjct: 228 FAH 230
>pir||E75366 glutamyl-tRNA synthetase-related protein - Deinococcus radiodurans
(strain R1) >gi|6459454|gb|AAF11243.1|AE002010_6
(AE002010) glutamyl-tRNA synthetase-related protein
[Deinococcus radiodurans]
Length = 295
Score = 90.5 bits (221), Expect = 5e-17
Identities = 73/250 (29%), Positives = 103/250 (41%), Gaps = 42/250 (16%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V RFAP+P GA HLGNAR A+L++ +++ GG+ +LRF+D D R Y++ D
Sbjct: 3 VTGRFAPSPTGAMHLGNARTALLAWLHSRALGGRHLLRFEDLD--TGRVRGWAYDLTRRD 60
Query: 160 LEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHRDEP 219
LEWLG+ DE S+RL+LY L Y CTC ++ PH +E
Sbjct: 61 LEWLGLDWDEEFRQSERLDLYAAALAGL----DTYPCTCTRKEVLAAIADSAGAPHGEEA 116
Query: 220 VEVQLERWRKMLNGEYKEGEAVVRIKTDLNHP-NPAVRDWPALRIVDNPNHPRAGNKYRV 278
V G + G HP PA R W +G+
Sbjct: 117 V----------YPGTCRPGSV---------HPERPAARRWRVPEAESCVTDALSGDTLCQ 157
Query: 279 W----------------PLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEY 322
W Y+ A +DD +GVT + RG + RQ ++ G+
Sbjct: 158 WLPRDVGDFVLQRNDGVYAYHLAVVVDDALMGVTDVLRGADLWTASPRQAALHRALGFTP 217
Query: 323 PVTVHHGRLS 332
P +H LS
Sbjct: 218 PRFLHVPLLS 227
>gb|AAB36521.1| (U76418) glutamyl-tRNA synthetase [Neisseria gonorrhoeae]
Length = 138
Score = 85.4 bits (208), Expect = 2e-15
Identities = 44/132 (33%), Positives = 70/132 (52%), Gaps = 10/132 (7%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V TRFAP+P G H+G R A+ S+ +A+ + G+F+LR +DTD E + +I++
Sbjct: 3 VKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDTDLARSTAESV--NIILDG 60
Query: 160 LEWLGI---KPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDKGIPCPHR 216
++W+G+ D +VY + R + Y + EL+ G AY C C E+ +R+K
Sbjct: 61 MKWVGLDYDSADNVVYQTRRFDRYKEVIAELLAKGDAYYCYCSKEELEAMREKA-----E 115
Query: 217 DEPVEVQLERWR 228
E RWR
Sbjct: 116 KEGTATYDRRWR 127
>emb|CAC00262.1| (AL160371) probable glutaminyl-tRNA synthetase [Leishmania major]
Length = 167
Score = 83.9 bits (204), Expect = 5e-15
Identities = 38/116 (32%), Positives = 71/116 (60%), Gaps = 2/116 (1%)
Query: 94 KAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFY 153
K GK RF P P+G H+G+A++ L++ A+ +GGK R+DDT+P+ + + ++
Sbjct: 44 KVTGGKPYFRFPPEPNGFLHIGHAKSMNLNFGSARAHGGKCYXRYDDTNPESE--DQVYI 101
Query: 154 EMIIEDLEWLGIKPDEIVYASDRLELYYKYAEELIKMGKAYVCTCKPEKFRELRDK 209
+ I+E + W+G PD + ++SD + + +A +LIK G YV P++ ++ R++
Sbjct: 102 DAIMEXVNWMGWXPDWVTFSSDYFDQLHTFAVQLIKDGXXYVDHSTPDELKQQREQ 157
>sp|O86528|SYE_STRCO GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|7479256|pir||T29077 glutamate--tRNA ligase (EC
6.1.1.17) - Streptomyces coelicolor
>gi|3355695|emb|CAA19995.1| (AL031124) glutamyl-tRNA
synthetase [Streptomyces coelicolor A3(2)]
Length = 494
Score = 82.3 bits (200), Expect = 1e-14
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 52/318 (16%)
Query: 92 LPKAEKGKVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPI 151
+ A V RF P+P G H+G R A+ ++ +A+ + G + R +DTD R
Sbjct: 1 MASASGSPVRVRFCPSPTGNPHVGLVRTALFNWAFARHHQGTLVFRIEDTD--AARDSEE 58
Query: 152 FYEMIIEDLEWLGIKPDE---------IVYASDRLELYYKYAEELIKMGKAYVCTCKPEK 202
Y+ +++ + WLG DE S R+++Y A++L+ G AY C C E+
Sbjct: 59 SYDQLLDSMRWLGFDWDEGPEVGGPHAPYRQSQRMDIYQDVAQKLLDAGHAYRCYCSQEE 118
Query: 203 FRELRD----KGIPC---PHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDLNHPNPAV 255
R+ G P H E + Q+E + + E +VR + P+ A+
Sbjct: 119 LDTRREAARAAGKPSGYDGHCRELTDAQVEEYTS------QGREPIVRFRM----PDEAI 168
Query: 256 RDWPALR--IVDNP-NHPRAG-NKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQ 311
+R I P N P G + PLY + +DD + +TH+ RG++ + RQ
Sbjct: 169 TFTDLVRGEITYLPENVPDYGIVRANGAPLYTLVNPVDDALMEITHVLRGEDLLSSTPRQ 228
Query: 312 RYIYEYF-----GWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRAL 366
+Y+ E P H + EG K L DP+ ++
Sbjct: 229 IALYKALIELGVAKEIPAFGHLPYVMGEG--------------NKKLSKRDPQ-SSLNLY 273
Query: 367 RRRGILPEAIKELIIEVG 384
R RG LPE + + +G
Sbjct: 274 RERGFLPEGLLNYLSLLG 291
>pir||A83055 probable aminoacyl-transfer RNA synthetase (class I) PA4724
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9950984|gb|AAG08110.1|AE004886_2 (AE004886) probable
aminoacyl-transfer RNA synthetase (class I) [Pseudomonas
aeruginosa]
Length = 293
Score = 81.9 bits (199), Expect = 2e-14
Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 101 VTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIEDL 160
V RFAP P G H G+ AA+ SY A+ GG++++R +D DP R P + I+E L
Sbjct: 6 VGRFAPTPSGYLHFGSLVAAVASYLDARAVGGRWLVRMEDLDP--PREVPGAQQAILETL 63
Query: 161 EWLGIKPDEIV-YASDRLELYYKYAEELIKMGKAYVCTCKPEKFREL--------RDKGI 211
E G + D V S+R Y E+L++ G AY CTC ++ RD G
Sbjct: 64 ERYGFEWDGAVERQSERFPAYAAVVEQLLRSGLAYACTCSRKQLEGFAGIYPGFCRDAG- 122
Query: 212 PCPHRDEPVEVQLERWRKMLNGEYKEGEAVVRIKTDL-NHPNPAVRDWPALRIVDNPNHP 270
H E ++L ++ EY+ V R++ ++ H V D+ R
Sbjct: 123 ---HAREDAAIRL----RVPELEYR---FVDRVQGEVRQHLGREVGDFVIQR-------- 164
Query: 271 RAGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVH 327
R G Y A +DD G+T I RG + ++ RQ Y+ E G P +H
Sbjct: 165 RDG-----LYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQLYLQELLGLSQPRYLH 216
>sp|P31970|SYE_SYNP2 GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|154584|gb|AAA27356.1| (M99379) glutamyl-tRNA ligase
[Synechococcus sp.]
Length = 160
Score = 81.1 bits (197), Expect = 3e-14
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G AR A+ ++ +A +GG F+LR +DTD ++R +P + E I
Sbjct: 3 VRVRIAPSPTGNLHIGTARTAVFNWLFAHHHGGTFVLRVEDTD--LERSKPEYTENIKTG 60
Query: 160 LEWLGIKPDE-IVYASDRLELYYKYAEELIKMGKAYVCTCKP---EKFRELRDKGIPCPH 215
L+WLG+ DE + + RL+ Y + L+ G AY C C P E RE + P
Sbjct: 61 LQWLGLHWDEGPFFQTQRLDQYKAAIQTLLDQGLAYRCYCTPAELEAMREQQKANNQAPR 120
Query: 216 RDEPVEVQLERWRKMLNGEYKEGEA-----VVRIKTD 247
D R R + + E EA V+R K D
Sbjct: 121 YD-------NRHRNLTEAQRAEFEAQGRKPVIRFKID 150
>pir||S35031 glutamate--tRNA ligase (EC 6.1.1.17) - Synechococcus sp.
(fragment)
Length = 159
Score = 81.1 bits (197), Expect = 3e-14
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 100 VVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIED 159
V R AP+P G H+G AR A+ ++ +A +GG F+LR +DTD ++R +P + E I
Sbjct: 3 VRVRIAPSPTGNLHIGTARTAVFNWLFAHHHGGTFVLRVEDTD--LERSKPEYTENIKTG 60
Query: 160 LEWLGIKPDE-IVYASDRLELYYKYAEELIKMGKAYVCTCKP---EKFRELRDKGIPCPH 215
L+WLG+ DE + + RL+ Y + L+ G AY C C P E RE + P
Sbjct: 61 LQWLGLHWDEGPFFQTQRLDQYKAAIQTLLDQGLAYRCYCTPAELEAMREQQKANNQAPR 120
Query: 216 RDEPVEVQLERWRKMLNGEYKEGEA-----VVRIKTD 247
D R R + + E EA V+R K D
Sbjct: 121 YD-------NRHRNLTEAQRAEFEAQGRKPVIRFKID 150
>sp|O52914|SYE_CAMJE GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS)
>gi|2706403|emb|CAA05150.1| (AJ002027) glutamine tRNA
synthetase [Campylobacter jejuni]
Length = 82
Score = 70.6 bits (170), Expect = 4e-11
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 99 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVKRPEPIFYEMIIE 158
K+ TRFAP+P G H+G R A+ +Y YA+ GG F+LR +DTD +KR + IIE
Sbjct: 4 KLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIEDTD--LKRNSKEATKAIIE 61
Query: 159 DLEWLGIKPD-EIVYASDRLE 178
+W G++ D E+ Y S+R +
Sbjct: 62 AFKWCGLEHDGEVTYQSERFD 82
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.141 0.422
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232210106
Number of Sequences: 2977
Number of extensions: 11002066
Number of successful extensions: 30770
Number of sequences better than 1.0e-10: 110
Number of HSP's better than 0.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 30357
Number of HSP's gapped (non-prelim): 154
length of query: 571
length of database: 189,106,746
effective HSP length: 54
effective length of query: 517
effective length of database: 156,788,448
effective search space: 81059627616
effective search space used: 81059627616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 167 (69.5 bits)