BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0345 (korG-1) DE:2-ketoglutarate ferredoxin oxidoreductase,
subunit gamma (korG-1)
         (170 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||E75168 2-ketoglutarate ferredoxin oxidoreductase, chain gam...   329  1e-89
pir||G71046 probable ferredoxin oxidoreductase gamma subunit - P...   319  1e-86
pir||H75168 2-ketoglutarate ferredoxin oxidoreductase, chain gam...   141  4e-33
pir||D71046 probable ferredoxin oxidoreductase gamma subunit - P...   140  1e-32
sp|Q57956|KORC_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KET...   139  2e-32
sp|O27114|KORC_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KET...   135  3e-31
gi|11498082 2-ketoglutarate ferredoxin oxidoreductase, subunit g...   122  2e-27
pir||A71920 chain of 2-oxoglutarate oxidoreductase - Helicobacte...    96  2e-19
pir||G64593 probable 2-oxoglutarate synthase (EC 1.2.7.3) gamma ...    93  2e-18
pir||D72380 hypothetical protein TM0406 - Thermotoga maritima (s...    90  1e-17
pir||B81400 2-oxoglutarate synthase (EC 1.2.7.3) gamma chain Cj0...    90  1e-17
gb|AAC38213.1| (AF021094) OorC subunit of 2-oxoglutarate:accepto...    85  4e-16
sp|O58411|PORC_PYRHO PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES CO...    72  3e-12
pir||D75047 keto-valine-ferredoxin oxidoreductase gamma chain PA...    72  4e-12
sp|Q51799|PORC_PYRFU PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES CO...    69  4e-11
sp|O27881|IORB_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORB ...    68  5e-11

>pir||E75168 2-ketoglutarate ferredoxin oxidoreductase, chain gamma  (korg-1)
           PAB0345 - Pyrococcus abyssi (strain Orsay)
           >gi|5457938|emb|CAB49428.1| (AJ248284) 2-ketoglutarate
           ferredoxin oxidoreductase, subunit gamma (korG-1)
           [Pyrococcus abyssi]
           Length = 170
           
 Score =  329 bits (835), Expect = 1e-89
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL
Sbjct: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDREFVGAPFTRIAEETTGLALT 120
           MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDREFVGAPFTRIAEETTGLALT
Sbjct: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDREFVGAPFTRIAEETTGLALT 120

Query: 121 VNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGRE 170
           VNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGRE
Sbjct: 121 VNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGRE 170


>pir||G71046 probable ferredoxin oxidoreductase gamma subunit - Pyrococcus
           horikoshii >gi|3258092|dbj|BAA30775.1| (AP000006) 170aa
           long hypothetical ferredoxin oxidoreductase gamma
           subunit [Pyrococcus horikoshii]
           Length = 170
           
 Score =  319 bits (808), Expect = 1e-86
 Identities = 160/170 (94%), Positives = 170/170 (99%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           MQIRFAG+GGQGVVLAGVILGEAAAIEGL+VLQTQDYSSASRGGHSIADVIISDGEIYDL
Sbjct: 1   MQIRFAGIGGQGVVLAGVILGEAAAIEGLRVLQTQDYSSASRGGHSIADVIISDGEIYDL 60

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDREFVGAPFTRIAEETTGLALT 120
           MVT+ADVLVALHQLGYETAKSKLKP+GLLIIDTDLVKPDR+FVGAPFTRIAEETTGLALT
Sbjct: 61  MVTHADVLVALHQLGYETAKSKLKPDGLLIIDTDLVKPDRDFVGAPFTRIAEETTGLALT 120

Query: 121 VNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGRE 170
           VNMVALGYLIAKTG+VKPESVEEAIRRRVP+GTEEIN++AFRKGLEVG+E
Sbjct: 121 VNMVALGYLIAKTGIVKPESVEEAIRRRVPKGTEEINLRAFRKGLEVGKE 170


>pir||H75168 2-ketoglutarate ferredoxin oxidoreductase, chain gamma  (korg-2)
           PAB0348 - Pyrococcus abyssi (strain Orsay)
           >gi|5457941|emb|CAB49431.1| (AJ248284) 2-ketoglutarate
           ferredoxin oxidoreductase, subunit gamma (korG-2)
           [Pyrococcus abyssi]
           Length = 185
           
 Score =  141 bits (352), Expect = 4e-33
 Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 8/174 (4%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAI-EGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           +I   G GGQGV+LA VILG AAA+ EG   +QTQ Y   SRGG S A+V+ISD  I   
Sbjct: 7   EILIGGFGGQGVILASVILGRAAAVYEGFYAVQTQAYGPESRGGASRAEVVISDEPIDYP 66

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLV-------KPDREFVGAPFTRIAEE 113
            V   D  + L Q  Y+     +K  GL+I++ DLV       + D+     P T +AEE
Sbjct: 67  KVIEPDYAILLSQQAYDKYLPLVKKGGLVIVEEDLVPHRNKELEKDKSVYAYPLTELAEE 126

Query: 114 TTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEV 167
           TTGL+LT+N++ LG  +  T +VK ES+E+A+   VP+GTE+IN+KA  KG E+
Sbjct: 127 TTGLSLTMNILTLGLFVGLTNIVKRESIEKAVLDAVPKGTEQINLKALHKGFEL 180


>pir||D71046 probable ferredoxin oxidoreductase gamma subunit - Pyrococcus
           horikoshii >gi|3258089|dbj|BAA30772.1| (AP000006) 185aa
           long hypothetical ferredoxin oxidoreductase gamma
           subunit [Pyrococcus horikoshii]
           Length = 185
           
 Score =  140 bits (349), Expect = 1e-32
 Identities = 81/177 (45%), Positives = 108/177 (60%), Gaps = 8/177 (4%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAI-EGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           +I   G GGQGV+LA VILG AAA+ EG   +QTQ Y   SRGG S A+V+ISD  I   
Sbjct: 7   EILIGGFGGQGVILASVILGRAAAVYEGFYAVQTQAYGPESRGGASRAEVVISDEPIDYP 66

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLV-------KPDREFVGAPFTRIAEE 113
            V   D  + L Q  Y+     +K  GL+II+ DLV       +  R+    P T IAEE
Sbjct: 67  KVIEPDYAILLSQQAYDKYLPLVKNGGLVIIEEDLVPNRNEELEKGRKVYAYPLTEIAEE 126

Query: 114 TTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGRE 170
           TTGL+LT+N++ LG  +  T +VK ES+E+A+   VP+GTE+IN+KA  KG E+  +
Sbjct: 127 TTGLSLTMNILTLGLFVGLTKIVKKESIEKAVLDAVPKGTEQINLKALYKGFELAEK 183


>sp|Q57956|KORC_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KETOGLUTARATE
           OXIDOREDUCTASE GAMMA CHAIN) (KOR)
           (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE GAMMA SUBUNIT)
           >gi|2127896|pir||H64366 probable 2-oxoglutarate synthase
           (EC 1.2.7.3) gamma chain - Methanococcus jannaschii
           >gi|1591240|gb|AAB98530.1| (U67503) 2-ketoglutarate
           ferredoxin oxidoreductase, subunit gamma (korG)
           [Methanococcus jannaschii]
           Length = 187
           
 Score =  139 bits (347), Expect = 2e-32
 Identities = 79/176 (44%), Positives = 107/176 (59%), Gaps = 7/176 (3%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAI-EGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           +IR +G GGQG++LAGVILG AAA+ +  + +QTQ Y   +RGG S ++V+ISD  I   
Sbjct: 11  EIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEVVISDEPIDFP 70

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDR------EFVGAPFTRIAEET 114
            V   D+LV L Q  Y+  K  +K  G++++D DLV  D+           PFTRIA E 
Sbjct: 71  KVIKPDILVCLSQQAYDKYKDDIKEGGVVLVDEDLVSTDKMPEVDVTMYKIPFTRIASEE 130

Query: 115 TGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGRE 170
             L +  N+V LG L   T +V  ES+E+AI   VP+GTEE N+ AF KG EV +E
Sbjct: 131 IKLPIVANIVMLGALTRLTNIVSKESMEKAILDSVPKGTEEKNLLAFSKGYEVAKE 186


>sp|O27114|KORC_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KETOGLUTARATE
           OXIDOREDUCTASE GAMMA CHAIN) (KOR)
           (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE GAMMA SUBUNIT)
           >gi|7448903|pir||B69005 probable 2-oxoglutarate synthase
           (EC 1.2.7.3) gamma chain - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2622138|gb|AAB85531.1| (AE000875) 2-oxoglutarate
           oxidoreductase, gamma subunit  [Methanobacterium
           thermoautotrophicum]
           Length = 189
           
 Score =  135 bits (336), Expect = 3e-31
 Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 11/177 (6%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAI-EGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           +IR AG GGQGV+LAG++LG+AA++ +GL  +QTQ Y   +RGG S A+V+ISD EI   
Sbjct: 7   EIRIAGFGGQGVILAGIVLGKAASLYDGLYAVQTQSYGPEARGGASRAEVVISDHEIDYP 66

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKP----------DREFVGAPFTRI 110
            V + D+LVA+      T    LK  G LI+D D+V            + ++  AP TR 
Sbjct: 67  KVQSPDILVAMSHQALLTYMDDLKRGGALIVDPDMVVEAEIEDFIRAREVKYFRAPATRT 126

Query: 111 AEETTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEV 167
           AEE  G+ +  NMV +G L   TG+V   + EEAI+  VP GTEE N+ AF+ G E+
Sbjct: 127 AEERVGITIVANMVMIGALTEATGIVSVRAAEEAIKDSVPPGTEEKNLMAFQAGREL 183


>gi|11498082 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma (korG)
           [Archaeoglobus fulgidus]
           >gi|6685586|sp|O29779|KORC_ARCFU 2-OXOGLUTARATE SYNTHASE
           SUBUNIT KORC (2-KETOGLUTARATE OXIDOREDUCTASE GAMMA
           CHAIN) (KOR) (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE
           GAMMA SUBUNIT) >gi|7430379|pir||G69308 probable
           2-oxoglutarate synthase (EC 1.2.7.3) gamma chain -
           Archaeoglobus fulgidus >gi|2650158|gb|AAB90767.1|
           (AE001072) 2-ketoglutarate ferredoxin oxidoreductase,
           subunit gamma (korG) [Archaeoglobus fulgidus]
           Length = 187
           
 Score =  122 bits (304), Expect = 2e-27
 Identities = 73/169 (43%), Positives = 100/169 (58%), Gaps = 4/169 (2%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           + IR AG GGQGV+ AG++L EA A+EG  V+QTQ Y   +RGG S AD+I+SD EI   
Sbjct: 5   VNIRIAGTGGQGVIKAGLVLAEAFALEGKNVVQTQSYGPEARGGASRADIIVSDDEIDFP 64

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDREFVGAPFTRIAEETTGLALT 120
            +   D L+ LH   Y     ++  E  +I D+ LV   R  +G PFT  +    G  L 
Sbjct: 65  GLRRVDYLLVLHDSAYRKYYPQVDGETHVIYDSSLVNA-RRGLGFPFTETSIREFGTPLF 123

Query: 121 VNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLEVGR 169
            NM+A+G L A  G ++PE VE  I++R+ +  E  N+KAFR G E+GR
Sbjct: 124 ANMIAIGALTAMLG-LQPEKVEVVIQKRMRKAEE--NVKAFRIGFEMGR 169


>pir||A71920 chain of 2-oxoglutarate oxidoreductase - Helicobacter pylori
           (strain J99) >gi|4155077|gb|AAD06112.1| (AE001486)
           SUBUNIT OF 2-OXOGLUTARATE OXIDOREDUCTASE [Helicobacter
           pylori J99]
           Length = 184
           
 Score = 96.0 bits (235), Expect = 2e-19
 Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 8/171 (4%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDLM 61
           Q+RF GVGGQGV+LAG IL EA  + G    +T  Y+S  RGG +  D+++   EI    
Sbjct: 4   QLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPY 63

Query: 62  VTNA--DVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDRE------FVGAPFTRIAEE 113
                 D ++++ Q+ Y   KS +K  G+++ID +LV P +E          P   IA++
Sbjct: 64  AKEGEIDFMLSVAQISYNQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISIAKD 123

Query: 114 TTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKG 164
             G  +T ++VAL   +  T  V+   V + + ++VP    E N KAF  G
Sbjct: 124 EVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVAETNKKAFEIG 174


>pir||G64593 probable 2-oxoglutarate synthase (EC 1.2.7.3) gamma chain -
           Helicobacter pylori (strain 26695)
           >gi|2313709|gb|AAD07656.1| (AE000572) ferredoxin
           oxidoreductase, gamma subunit [Helicobacter pylori
           26695]
           Length = 186
           
 Score = 93.2 bits (228), Expect = 2e-18
 Identities = 58/171 (33%), Positives = 90/171 (51%), Gaps = 8/171 (4%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDLM 61
           Q+RF GVGGQGV+LAG IL EA  + G    +T  Y+S  RGG +  D+++   EI    
Sbjct: 4   QLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDRDEIIFPY 63

Query: 62  VTNA--DVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDRE------FVGAPFTRIAEE 113
                 D ++++ Q+ Y   KS +K  G+++ID +LV P +E          P   IA++
Sbjct: 64  AKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKD 123

Query: 114 TTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKG 164
             G  +T ++VAL   +  T  V+   V + + ++VP    + N KAF  G
Sbjct: 124 EVGNIITQSVVALAITVELTKCVEEIIVLDTMLKKVPAKVADTNKKAFEIG 174


>pir||D72380 hypothetical protein TM0406 - Thermotoga maritima (strain MSB8)
           >gi|4980911|gb|AAD35491.1|AE001720_5 (AE001720)
           keto/oxoacid ferredoxin oxidoreductase, gamma subunit,
           putative [Thermotoga maritima]
           Length = 200
           
 Score = 90.5 bits (221), Expect = 1e-17
 Identities = 59/172 (34%), Positives = 88/172 (50%), Gaps = 8/172 (4%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDL 60
           + IR AG+ GQG +LAG+IL +A   EG  V+QTQ YS+  RG  S  DV+  D  I   
Sbjct: 5   VSIRIAGISGQGNILAGLILAKALVYEGKWVVQTQSYSAQVRGDVSYCDVLYDDSPIDYP 64

Query: 61  MVTNADVLVALHQLGYETAKSKLKPEGLLIIDTDLVK--PD------REFVGAPFTRIAE 112
                D++  LHQ   +     +K  G++I+D   VK  PD      R+ +  P T  A 
Sbjct: 65  ESEYFDIVCILHQKAMDELYKSVKVNGVVILDQTFVKNVPDFVKRITRKILFVPATERAI 124

Query: 113 ETTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKG 164
                A+  N++ +G L     +VK +S++ A++  V R   +IN+KA   G
Sbjct: 125 SEFKTAMVSNVIMVGVLAKVCNIVKLDSLKRALKDHVRRPLWDINLKALEFG 176


>pir||B81400 2-oxoglutarate synthase (EC 1.2.7.3) gamma chain Cj0538 [imported]
           - Campylobacter jejuni (strain NCTC 11168)
           >gi|6968006|emb|CAB75174.1| (AL139075) OORC subunit of
           2-oxoglutarate:acceptor oxidoreductase [Campylobacter
           jejuni]
           Length = 185
           
 Score = 90.1 bits (220), Expect = 1e-17
 Identities = 55/173 (31%), Positives = 89/173 (50%), Gaps = 8/173 (4%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDLM 61
           Q+RF G GGQGV+ AG IL EAA  EG +  +   Y+S  RGG +  D+II D EI    
Sbjct: 4   QLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVRGGPTKVDIIIDDKEILFPY 63

Query: 62  VTNADV--LVALHQLGYETAKSKLKPEGLLIIDTDLVKPDRE------FVGAPFTRIAEE 113
               +V  +++    GY+  +  +K  G+++++ +LV P+ E          P   IA++
Sbjct: 64  AVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHPESEDYKKWQIFEIPIITIAKD 123

Query: 114 TTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLE 166
             G   T ++VAL      +  +  + ++E +   VP  T + N KAF  G++
Sbjct: 124 EVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVPAKTRDANAKAFDLGVK 176


>gb|AAC38213.1| (AF021094) OorC subunit of 2-oxoglutarate:acceptor oxidoreductase
           [Helicobacter pylori]
           Length = 184
           
 Score = 85.0 bits (207), Expect = 4e-16
 Identities = 56/171 (32%), Positives = 86/171 (49%), Gaps = 8/171 (4%)

Query: 2   QIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDLM 61
           Q+RF GVGGQGV+LAG IL EA    G    +T  Y+S  RGG +  D+ +   EI    
Sbjct: 4   QLRFTGVGGQGVLLAGEILAEAKIASGGYGTKTSTYTSQVRGGPTKVDLSLDRNEIIFPY 63

Query: 62  VTNA--DVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPDRE------FVGAPFTRIAEE 113
                 D ++++ Q+ Y   KS +K  G++++D +LV P +E          P   IA++
Sbjct: 64  GKEGEIDFMLSVAQISYNQFKSDIKQGGIVVMDPNLVTPTKEDEEKYQLYKIPIISIAKD 123

Query: 114 TTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKG 164
             G  +T ++VAL      T  V+     + + ++VP    + N KAF  G
Sbjct: 124 EVGNIITQSVVALAITAEFTKCVEENIALDTMLKKVPAKVADTNKKAFEIG 174


>sp|O58411|PORC_PYRHO PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES COMMON GAMMA SUBUNIT
           [INCLUDES: PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE
           OXIDOREDUCTASE GAMMA CHAIN) (POR) (PYRUVIC-FERREDOXIN
           OXIDOREDUCTASE GAMMA SUBUNIT); KETOISOVALERATE
           OXIDOREDUCTASE SUBUNIT VORC (VOR) (2->
           >gi|7448910|pir||G71113 probable pyruvate synthase (EC
           1.2.7.1) gamma chain - Pyrococcus horikoshii
           >gi|3257086|dbj|BAA29769.1| (AP000003) 185aa long
           hypothetical ferredoxin oxidoreductase gamma subunit
           [Pyrococcus horikoshii]
           Length = 185
           
 Score = 72.2 bits (174), Expect = 3e-12
 Identities = 63/178 (35%), Positives = 84/178 (46%), Gaps = 13/178 (7%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEI-YD 59
           ++IRF G GGQG V A  IL EAA +EG  V     +    RG    A   I +  I   
Sbjct: 2   IEIRFHGRGGQGAVTAANILAEAAFLEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61

Query: 60  LMVTNADVLVALHQLGYET--AKSKLKPEGLLIIDTD---------LVKPDREFVGAPFT 108
             +   D++V L     ET    + LK EG++II+T+         L K  ++      T
Sbjct: 62  TQIYEPDIVVVLDPSLLETVDVTAGLKEEGIVIINTEKSKDEILEKLKKKPKKLALVDAT 121

Query: 109 RIAEETTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLE 166
            IA ET GL +T N   LG +   TG+V  ESVE+AI+        E N KA R+  E
Sbjct: 122 TIALETLGLPIT-NTAILGAVAKATGLVNIESVEKAIKDTFSGELGEKNAKAAREAFE 178


>pir||D75047 keto-valine-ferredoxin oxidoreductase gamma chain PAB1470 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458786|emb|CAB50273.1| (AJ248287)
           keto-valine-ferredoxin oxidoreductase gamma chain
           [Pyrococcus abyssi]
           Length = 185
           
 Score = 71.8 bits (173), Expect = 4e-12
 Identities = 63/178 (35%), Positives = 84/178 (46%), Gaps = 13/178 (7%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEI-YD 59
           ++IRF G GGQG V A  IL EAA IEG  V     +    RG    A   I +  I   
Sbjct: 2   IEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61

Query: 60  LMVTNADVLVALHQLGYET--AKSKLKPEGLLIIDTD---------LVKPDREFVGAPFT 108
             +   DV+V L     ET    + LK +G++I++T+         L +  ++      T
Sbjct: 62  TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDAT 121

Query: 109 RIAEETTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLE 166
            IA ET GL +T N   LG +   TG+VK ESVE AI+        E N KA R+  E
Sbjct: 122 TIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFE 178


>sp|Q51799|PORC_PYRFU PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES COMMON GAMMA SUBUNIT
           [INCLUDES: PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE
           OXIDOREDUCTASE GAMMA CHAIN) (POR) (PYRUVIC-FERREDOXIN
           OXIDOREDUCTASE GAMMA SUBUNIT); KETOISOVALERATE
           OXIDOREDUCTASE SUBUNIT VORC (VOR) (2->
           >gi|11279655|pir||T45083 pyruvate synthase (EC 1.2.7.1)
           gamma chain [imported] - Pyrococcus furiosus
           >gi|1197358|emb|CAA59500.1| (X85250) pyruvate ferredoxin
           oxidoreductase [Pyrococcus furiosus]
           Length = 185
           
 Score = 68.7 bits (165), Expect = 4e-11
 Identities = 60/178 (33%), Positives = 83/178 (45%), Gaps = 13/178 (7%)

Query: 1   MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEI-YD 59
           +++RF G GGQG V A  IL EAA +EG  V     +    RG    A   I +  I   
Sbjct: 2   IEVRFHGRGGQGAVTAANILAEAAFLEGKYVQAFPFFGVERRGAPVTAFTRIDNKPIRIK 61

Query: 60  LMVTNADVLVALHQ--LGYETAKSKLKPEGLLIIDTD---------LVKPDREFVGAPFT 108
             +   DV+V L    L      + LK EG++I++T+         L K  ++      T
Sbjct: 62  TQIYEPDVVVVLDPSLLDAVDVTAGLKDEGIVIVNTEKSKEEVLEKLKKKPKKLAIVDAT 121

Query: 109 RIAEETTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLE 166
            IA E  GL +T N   LG +   TG+VK ES+EEAI+        E N +A R+  E
Sbjct: 122 TIALEILGLPIT-NTAILGAVAKATGLVKIESIEEAIKDTFSGELGEKNARAAREAYE 178


>sp|O27881|IORB_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORB (IOR) (INDOLEPYRUVATE
           FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
           >gi|7430381|pir||H69114 indolepyruvate oxidoreductase,
           beta subunit - Methanobacterium thermoautotrophicum
           (strain Delta H) >gi|2622989|gb|AAB86319.1| (AE000938)
           indolepyruvate oxidoreductase, beta subunit 
           [Methanobacterium thermoautotrophicum]
           Length = 196
           
 Score = 68.3 bits (164), Expect = 5e-11
 Identities = 55/193 (28%), Positives = 93/193 (47%), Gaps = 27/193 (13%)

Query: 3   IRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEIYDLMV 62
           I   GVGGQG++   VI+GEAA  + + V+ ++ +  A RGG    ++ I  GE++  ++
Sbjct: 5   IYVCGVGGQGIIKTSVIIGEAAMKKDINVVMSEIHGMAQRGGSVSTEIRI--GEVHGSII 62

Query: 63  TN--ADVLVALHQLGYETAKSKLKPEGLLIIDTDLVKPD-------------------RE 101
            +  AD+++A   L    A  K+  E  +I++T ++ P                     E
Sbjct: 63  PDGEADLVLAFEPLEAIRALPKMSEESEVILNTSVIPPFNLMRSPHPYPPLDEIMSTLEE 122

Query: 102 FVGAPFTRIAEE---TTGLALTVNMVALGYLIAKTGV-VKPESVEEAIRRRVPRGTEEIN 157
             G+     AEE     G  L++NMV LG   A  G  ++ ES+  ++R  +P    ++N
Sbjct: 123 RAGSVRGFNAEEIALKAGHILSLNMVMLGAAAATPGFPLESESLISSMRDNLPSRLIDVN 182

Query: 158 IKAFRKGLEVGRE 170
           ++AFR G     E
Sbjct: 183 LRAFRDGFGAAAE 195


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.317    0.138    0.373 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55661383
Number of Sequences: 2977
Number of extensions: 2067066
Number of successful extensions: 6090
Number of sequences better than 1.0e-10: 16
Number of HSP's better than  0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6065
Number of HSP's gapped (non-prelim): 16
length of query: 170
length of database: 189,106,746
effective HSP length: 57
effective length of query: 113
effective length of database: 154,992,987
effective search space: 17514207531
effective search space used: 17514207531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 162 (67.5 bits)