BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0346 (korA-2) DE:2-ketoglutarate ferredoxin oxidoreductase,
subunit alpha (korA-2)
(385 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 774 0.0
pir||F71046 probable ferredoxin oxidoreductase alpha subunit - P... 740 0.0
pir||B71047 probable ferredoxin oxidoreductase alpha subunit - P... 438 e-122
pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 437 e-121
sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 418 e-116
pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 409 e-113
sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 409 e-113
pir||H72323 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 354 1e-96
pir||H81399 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 294 1e-78
gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit a... 278 7e-74
pir||E64593 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 261 1e-68
pir||G71919 chain of 2-oxoglutarate oxidoreductase - Helicobacte... 258 7e-68
gb|AAC38211.1| (AF021094) OorA subunit of 2-oxoglutarate:accepto... 256 3e-67
pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (s... 240 3e-62
dbj|BAB06093.1| (AP001515) pyruvate synthase alpha subunit [Baci... 210 3e-53
gb|AAG19013.1| (AE005001) pyruvate ferredoxin oxidoreductase, su... 202 5e-51
pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 196 3e-49
sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB... 196 3e-49
pir||A72519 probable 2-oxoacid--ferredoxin oxidoreductase alpha ... 186 4e-46
pir||A72627 probable 2-oxoacid--ferredoxin oxidoreductase, alpha... 184 1e-45
pir||S22396 pyruvate synthase (EC 1.2.7.1) alpha chain [validate... 176 4e-43
gb|AAG19514.1| (AE005043) putative 2-ketoglutarate ferredoxin ox... 176 4e-43
emb|CAB60189.1| (AL132824) putative oxidoreductase alpha-subunit... 175 1e-42
emb|CAC08296.1| (AL392148) putative oxidoreductase [Streptomyces... 175 1e-42
pir||F70864 probable oxidoreductase alpha subunit - Mycobacteriu... 169 5e-41
emb|CAC11404.1| (AL445063) probable pyruvate ferredoxin oxidored... 167 2e-40
emb|CAC11904.1| (AL445065) probable 2-oxoacid ferredoxin oxidore... 167 2e-40
gb|AAK42926.1| 2-oxoacid--ferredoxin oxidoreductase, alpha chain... 164 1e-39
pir||B72288 2-oxoacid ferredoxin oxidoreductase, alpha subunit -... 162 8e-39
emb|CAA75641.1| (Y15464) ferredoxin oxidoreductase-like (gamma a... 152 5e-36
pir||JC4919 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 152 5e-36
pir||G69170 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 142 7e-33
gi|11498355 2-oxoacid ferredoxin oxidoreductase, subunit alpha (... 131 1e-29
gi|11499635 2-ketoisovalerate ferredoxin oxidoreductase, subunit... 116 5e-25
dbj|BAA95605.1| (AB042412) pyruvate:ferredoxin oxidoreductase al... 110 3e-23
sp|P56810|PORA_METTH PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 106 4e-22
pir||C70403 ferredoxin oxidoreductase alpha subunit - Aquifex ae... 106 6e-22
gb|AAK42867.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 104 1e-21
gb|AAK41454.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 101 2e-20
pir||B75047 probable 2-oxoisovalerate--ferredoxin oxidoreductase... 101 2e-20
emb|CAC11767.1| (AL445064) probable 2-ketovalerate ferredoxin ox... 98 1e-19
sp|Q51801|VORA_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 97 4e-19
pir||A71114 probable ferredoxin oxidoreductase alpha subunit - P... 95 2e-18
sp|O58413|VORA_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 95 2e-18
gb|AAF91264.1|AF230199_6 (AF230199) pyruvate oxidoreductase alph... 94 2e-18
emb|CAA59457.1| (X85171) alpha subunit of pyruvate ferredoxin ox... 93 4e-18
sp|O05651|PORA_THEMA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 93 4e-18
pir||E71114 probable ferredoxin oxidoreductase alpha-2 subunit -... 93 4e-18
sp|O73986|PORA_PYRHO PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 93 4e-18
pir||F64658 pyruvate synthase (EC 1.2.7.1) alpha chain - Helicob... 92 8e-18
pir||H71857 pyruvate ferrodoxin oxidoreductase - Helicobacter py... 92 8e-18
gb|AAC02293.1| (AF013980) pyruvate:ferredoxin oxidoreductase alp... 92 1e-17
pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alph... 92 1e-17
sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 91 2e-17
gi|11499291 pyruvate ferredoxin oxidoreductase, subunit alpha (p... 90 4e-17
pir||G75046 pyruvate synthase (EC 1.2.7.1) alpha chain PAB1475 -... 89 7e-17
sp|Q51804|PORA_PYRFU PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 87 3e-16
pir||B70400 ferredoxin oxidoreductase alpha subunit - Aquifex ae... 86 8e-16
gb|AAK42308.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 83 5e-15
pir||S74041 pyruvate synthase (EC 1.2.7.1) alpha chain - Sulfolo... 83 5e-15
gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha su... 81 2e-14
gb|AAD28766.1| (AF132216) 2-oxoisovalerate oxidoreductase beta s... 81 3e-14
emb|CAC12141.1| (AL445066) indolepyruvate ferredoxin oxidoreduct... 80 3e-14
gi|11499084 indolepyruvate ferredoxin oxidoreductase, subunit al... 80 6e-14
gb|AAD17273.1| (AF119361) ferredoxin oxidoreductase a-subunit [F... 73 4e-12
pir||G75085 indolepyruvate ferredoxin oxidoreductase, chain alph... 71 2e-11
pir||D71055 probable indolepyruvate ferredoxin oxidoreductase al... 71 2e-11
sp|O07835|IORA_PYRKO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 71 3e-11
>pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-2)
PAB0346 - Pyrococcus abyssi (strain Orsay)
>gi|5457939|emb|CAB49429.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-2)
[Pyrococcus abyssi]
Length = 385
Score = 774 bits (1977), Expect = 0.0
Identities = 385/385 (100%), Positives = 385/385 (100%)
Query: 1 MRFPFPVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQM 60
MRFPFPVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQM
Sbjct: 1 MRFPFPVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQM 60
Query: 61 EDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQ 120
EDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQ
Sbjct: 61 EDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQ 120
Query: 121 PTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG 180
PTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG
Sbjct: 121 PTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG 180
Query: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD
Sbjct: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
Query: 241 ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAI 300
ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAI
Sbjct: 241 ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAI 300
Query: 301 KELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEV 360
KELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEV
Sbjct: 301 KELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEV 360
Query: 361 KLISKIGGEVHTPMEIVDFIRRDFS 385
KLISKIGGEVHTPMEIVDFIRRDFS
Sbjct: 361 KLISKIGGEVHTPMEIVDFIRRDFS 385
>pir||F71046 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258091|dbj|BAA30774.1| (AP000006) 385aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 385
Score = 740 bits (1890), Expect = 0.0
Identities = 363/385 (94%), Positives = 376/385 (97%)
Query: 1 MRFPFPVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQM 60
MR PFPVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL+DGVVIQM
Sbjct: 1 MRLPFPVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLIDGVVIQM 60
Query: 61 EDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQ 120
EDEI SIAA+IGASWAG KAMTATSGPGFSLMQENIGYAVMTETPIVVV+VQRGGPSTGQ
Sbjct: 61 EDEIGSIAAVIGASWAGVKAMTATSGPGFSLMQENIGYAVMTETPIVVVNVQRGGPSTGQ 120
Query: 121 PTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG 180
PTLPSQGDIMQSIWGTHGDH+LIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG
Sbjct: 121 PTLPSQGDIMQSIWGTHGDHTLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG 180
Query: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
HMRERVYIPEPDEIEIVNRKLP +EEEAKLPFGDPHGD VPPMPIFG+GYRTYVTGLTHD
Sbjct: 181 HMRERVYIPEPDEIEIVNRKLPGSEEEAKLPFGDPHGDGVPPMPIFGKGYRTYVTGLTHD 240
Query: 241 ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAI 300
E+GRPRTVEREVHER+IRRI EKIE+NKKDIFDYEARELDDAE+AIVTTGIVARSALRAI
Sbjct: 241 EKGRPRTVEREVHERLIRRIFEKIEKNKKDIFDYEARELDDAEIAIVTTGIVARSALRAI 300
Query: 301 KELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEV 360
KELR LGIKAGLLKINTIWPFDFELIEK+A KVERIYVPEMNLGQLYHLV+EGANGKAEV
Sbjct: 301 KELRNLGIKAGLLKINTIWPFDFELIEKVAEKVERIYVPEMNLGQLYHLVKEGANGKAEV 360
Query: 361 KLISKIGGEVHTPMEIVDFIRRDFS 385
KLISKIGGEVHTPMEI+DFIRRD S
Sbjct: 361 KLISKIGGEVHTPMEIIDFIRRDLS 385
>pir||B71047 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258095|dbj|BAA30778.1| (AP000006) 408aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 408
Score = 438 bits (1114), Expect = e-122
Identities = 224/370 (60%), Positives = 271/370 (72%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAII 71
F+ GDEAIA AI AGCRFYAGYPITP+SEI E MA +P V G +QMEDEI SIAA+I
Sbjct: 36 FMMGDEAIAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIGSIAAMI 95
Query: 72 GASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQ 131
GASW G KAMTATSGPGFSLMQENIGYAVMTETPIVVV+VQR GPSTGQ T +QGD Q
Sbjct: 96 GASWTGLKAMTATSGPGFSLMQENIGYAVMTETPIVVVNVQRSGPSTGQATKGAQGDFFQ 155
Query: 132 SIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
+ WGTHGDH +I +SP +V++AF TIRAFN+AEK RTPVI+L D +GH RE++ IP+P
Sbjct: 156 ARWGTHGDHPMIAVSPISVEDAFWETIRAFNIAEKLRTPVIVLFDGILGHTREQIRIPDP 215
Query: 192 DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVERE 251
DE+EI RKLP +EEEAKLPFGDPHGD VPPMP+FG GY T+VTG TH E G +E
Sbjct: 216 DEVEITYRKLPGSEEEAKLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQE 275
Query: 252 VHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAG 311
VH++++RRI KIE+N+ YE DDAE+ +V+ G+ AR +L A+ + RE GIKAG
Sbjct: 276 VHDKLVRRIHRKIEQNRDVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKAREEGIKAG 335
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
L T+ PF E + ++ KV I VPEMNLGQ+ V+ N +K ++KIGG
Sbjct: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMVLEVQRFVNDDVILKGVNKIGGVPL 395
Query: 372 TPMEIVDFIR 381
T EI+ IR
Sbjct: 396 TVEEILKEIR 405
>pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-1)
PAB2359 - Pyrococcus abyssi (strain Orsay)
>gi|5457936|emb|CAB49426.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-1)
[Pyrococcus abyssi]
Length = 408
Score = 437 bits (1111), Expect = e-121
Identities = 217/370 (58%), Positives = 273/370 (73%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAII 71
F+ GDEA+A AI AGCRFYAGYPITP+SEI E MA +P V G +QMEDEIASIAA++
Sbjct: 36 FMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMV 95
Query: 72 GASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQ 131
GASW G K MTATSGPGFSLMQEN+GYAVMTETP+V+VDVQR GPSTGQ T +QGD Q
Sbjct: 96 GASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ 155
Query: 132 SIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
+ WGTHGDH ++ +SP +V++AF TIRAFN+AE+ RTPV++L D +GH RE++ IP+P
Sbjct: 156 ARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDP 215
Query: 192 DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVERE 251
DE+EIV RKLPQNEEEA+LPFGDPHGD VPPMP+FG GY T+VTG TH E G +E
Sbjct: 216 DEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQE 275
Query: 252 VHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAG 311
VH++++RRI KIE+N++ YE DDAE+ +V+ G+ AR +L A+ + R+ GIK G
Sbjct: 276 VHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVG 335
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
L T+ PF E + ++ KV I VPEMNLGQ+ V+ N +K ++KIGG
Sbjct: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPL 395
Query: 372 TPMEIVDFIR 381
T EI+ IR
Sbjct: 396 TVEEILREIR 405
>sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2127893|pir||E64334 2-oxoacid--ferredoxin
oxidoreductase (EC 1.2.7.-) alpha chain - Methanococcus
jannaschii >gi|1592279|gb|AAB98264.1| (U67483)
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha
(korA) [Methanococcus jannaschii]
Length = 366
Score = 418 bits (1063), Expect = e-116
Identities = 208/368 (56%), Positives = 271/368 (73%), Gaps = 9/368 (2%)
Query: 9 KADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIA 68
K +F+QG++A A+ AI AGCRF+AGYPITP++EI EAMA +P V G IQMEDEI SIA
Sbjct: 2 KVEFMQGNQACAKGAIKAGCRFFAGYPITPSTEIAEAMARELPKVGGYYIQMEDEIGSIA 61
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGD 128
A+IGASW G KAMTATSGPGFSLMQENIG+A MTETP VVVD+QRGGPSTGQPT+ SQGD
Sbjct: 62 AVIGASWGGLKAMTATSGPGFSLMQENIGFAYMTETPCVVVDIQRGGPSTGQPTMASQGD 121
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYI 188
+MQ WG+HGD+ +I L+PS+VQE +DFTI AFN AEKYR PV +++D VGHMRE+V +
Sbjct: 122 MMQCRWGSHGDYEVIALAPSSVQEMYDFTIMAFNYAEKYRIPVFVMADEIVGHMREKVIL 181
Query: 189 PEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTV 248
D IEI+NRK P+ E+ K P+ P +P MP+FG GY ++TGLTHDERG P V
Sbjct: 182 --HDNIEIINRKKPE-EKPCKKPY--PFDKLIPEMPVFGEGYNVHITGLTHDERGYP-DV 235
Query: 249 EREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGI 308
E H++++RRIV KI +NK +I +E L DAE+ V G +R+ A++ LRE G+
Sbjct: 236 SPETHDKLVRRIVNKIRKNKDEIIKWEGENL-DAEIVFVCYGSPSRTVKHAVRNLREKGL 294
Query: 309 KAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGG 368
G +++ T++PF +L++K+ K +++ VPEMNLGQ+Y+ V EV L+ KIGG
Sbjct: 295 DVGYIRLITVYPFPDDLLKKL--KAKKVVVPEMNLGQIYYEVERVCKKAEEVILVDKIGG 352
Query: 369 EVHTPMEI 376
E+H P E+
Sbjct: 353 ELHRPEEL 360
>pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
- Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622136|gb|AAB85529.1| (AE000875) 2-oxoglutarate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 378
Score = 409 bits (1040), Expect = e-113
Identities = 202/369 (54%), Positives = 266/369 (71%), Gaps = 3/369 (0%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAII 71
FIQG++A AR AI AGCRF+AGYPITP++EI E MAL +P GV +QMEDEI ++ A+I
Sbjct: 8 FIQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQMEDEIGALGAVI 67
Query: 72 GASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQ 131
GA W+G + MTATSGPGFSLMQE++GYA MTETP+V+V+VQRG PSTGQPT+ SQ D+MQ
Sbjct: 68 GAVWSGVRGMTATSGPGFSLMQEHVGYAAMTETPLVIVNVQRGSPSTGQPTMASQSDMMQ 127
Query: 132 SIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
+ WG+HGD+ +I LSPS+VQE FDFT+RAFNLAE+YR PV+++ D VGHMRE++ I P
Sbjct: 128 ARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREKITI--P 185
Query: 192 DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVERE 251
D ++I R+ P E LPF P D VP MP FG GYR VTGLTHDE G P E
Sbjct: 186 DRVKIRKRRGPSVPPEEFLPFSAPE-DGVPEMPAFGDGYRIPVTGLTHDEGGYPDASNPE 244
Query: 252 VHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAG 311
H R+++R+ +KI R++ I D + +DA + +++ G +RS A+K RE G++AG
Sbjct: 245 GHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMAREDGVRAG 304
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
LKINT WPF + A + ++ V EMNLGQ+++ V+ A G AEV+L+ KIGGE+H
Sbjct: 305 YLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFYEVQRVAAGMAEVELLPKIGGEIH 364
Query: 372 TPMEIVDFI 380
P EI++ I
Sbjct: 365 RPEEILNMI 373
>sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 376
Score = 409 bits (1040), Expect = e-113
Identities = 202/369 (54%), Positives = 266/369 (71%), Gaps = 3/369 (0%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAII 71
FIQG++A AR AI AGCRF+AGYPITP++EI E MAL +P GV +QMEDEI ++ A+I
Sbjct: 6 FIQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQMEDEIGALGAVI 65
Query: 72 GASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQ 131
GA W+G + MTATSGPGFSLMQE++GYA MTETP+V+V+VQRG PSTGQPT+ SQ D+MQ
Sbjct: 66 GAVWSGVRGMTATSGPGFSLMQEHVGYAAMTETPLVIVNVQRGSPSTGQPTMASQSDMMQ 125
Query: 132 SIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
+ WG+HGD+ +I LSPS+VQE FDFT+RAFNLAE+YR PV+++ D VGHMRE++ I P
Sbjct: 126 ARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREKITI--P 183
Query: 192 DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVERE 251
D ++I R+ P E LPF P D VP MP FG GYR VTGLTHDE G P E
Sbjct: 184 DRVKIRKRRGPSVPPEEFLPFSAPE-DGVPEMPAFGDGYRIPVTGLTHDEGGYPDASNPE 242
Query: 252 VHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAG 311
H R+++R+ +KI R++ I D + +DA + +++ G +RS A+K RE G++AG
Sbjct: 243 GHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMAREDGVRAG 302
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
LKINT WPF + A + ++ V EMNLGQ+++ V+ A G AEV+L+ KIGGE+H
Sbjct: 303 YLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFYEVQRVAAGMAEVELLPKIGGEIH 362
Query: 372 TPMEIVDFI 380
P EI++ I
Sbjct: 363 RPEEILNMI 371
>pir||H72323 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
TM0878 [similarity] - Thermotoga maritima (strain MSB8)
>gi|4981412|gb|AAD35959.1|AE001753_15 (AE001753)
pyruvate:ferredoxin 2-oxidoreductase-related protein
[Thermotoga maritima]
Length = 386
Score = 354 bits (898), Expect = 1e-96
Identities = 191/373 (51%), Positives = 251/373 (67%), Gaps = 5/373 (1%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAII 71
F+QG+EA A AI AGCRF+AGYPITP++EI E MA +P V GV +QMEDEIAS AA++
Sbjct: 8 FLQGNEACALGAIKAGCRFFAGYPITPSTEIAEVMARELPKVGGVFVQMEDEIASAAAVV 67
Query: 72 GASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQ 131
GAS AG K+MTATSGPGFSL+QE IGYA+MTETP V +V R GPSTG PT P+QGDIMQ
Sbjct: 68 GASLAGVKSMTATSGPGFSLIQEVIGYAIMTETPCVFANVMRLGPSTGLPTKPAQGDIMQ 127
Query: 132 SIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
+ WGTHGDH++I L PS+V E + + I AFNLAE+YRTPV+ L DA +GHMRE Y P+
Sbjct: 128 TRWGTHGDHAIIALYPSSVAEVYRYIITAFNLAEEYRTPVVFLMDAMLGHMRESFYPPKD 187
Query: 192 DEIEIVNRKLPQN--EEEAKLPFGDPHGDFVPPMPIFGRG-YRTYVTGLTHDERGRPRTV 248
+E+ I+ R + EE+ +PF + P P+ G + +V+GL HDE G P +
Sbjct: 188 EELFIIERLKDTSFGEEDLFVPFSESEYAEPTPFPMAEMGKTKFHVSGLVHDESGFPLS- 246
Query: 249 EREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGI 308
+ E++IRR+ KI + +I YE E +DAE+ +V GIVARSA++A+K R I
Sbjct: 247 SPDAAEKLIRRLTNKIRLHADEIAFYEEYETEDAEILVVAYGIVARSAMKAVKIARRDRI 306
Query: 309 KAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEV-KLISKIG 367
K GL K TIWP K+A KV I + EMNLGQ + + +++V + I+K+
Sbjct: 307 KVGLFKPITIWPAPVSRFRKLAEKVNTIVIAEMNLGQYAKELISSIDRRSKVIRTINKVN 366
Query: 368 GEVHTPMEIVDFI 380
GE+ P EI+D I
Sbjct: 367 GELIKPEEILDVI 379
>pir||H81399 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
Cj0536 [similarity] - Campylobacter jejuni (strain NCTC
11168) >gi|6968004|emb|CAB75172.1| (AL139075) OORA
subunit of 2-oxoglutarate:acceptor oxidoreductase
[Campylobacter jejuni]
Length = 374
Score = 294 bits (745), Expect = 1e-78
Identities = 157/369 (42%), Positives = 233/369 (62%), Gaps = 3/369 (0%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIGAS 74
G+ IA+AAI GC+F+ GYPITP+SEI ++ +P DG IQMEDEI+ I+ IGA+
Sbjct: 8 GNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLPANDGTFIQMEDEISGISVAIGAA 67
Query: 75 WAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQSIW 134
+G K+MTA+SGPG SL E IG A + E P+V+V+V RGGPSTG PT +QGD+ Q+
Sbjct: 68 MSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIVNVMRGGPSTGLPTRVAQGDLFQAKA 127
Query: 135 GTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEPDEI 194
THGD + I ++P++++EA+ TIRAFNLAEKY TPV LL D VGHM + +P+ +I
Sbjct: 128 PTHGDFASIAIAPASLEEAYTETIRAFNLAEKYMTPVFLLMDETVGHMNGKAVLPDLKDI 187
Query: 195 EIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVEREVHE 254
++ NRK + +++ P+ + P F GYR +VTGL H + G P T + + +
Sbjct: 188 KVYNRKKFEGDKKDYKPYAAGENEPATLNPFF-TGYRYHVTGLHHGDIGFP-TEDGVIVK 245
Query: 255 RVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAGLLK 314
+ + R++ KI+ N++DI YE LDDAE I+ G V+RSA AI+ LRE GIK GL +
Sbjct: 246 KNMERLIGKIKNNQEDICTYEEYMLDDAEFLIIAYGSVSRSAKEAIQRLREQGIKVGLFR 305
Query: 315 INTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVHTPM 374
T++P + I ++ K +++ V E+N+GQ + E + + + + G TP
Sbjct: 306 PITLYPVAEKKIAEVVSKFKKVMVSELNMGQYLEEI-ERVTSRRDFISLHRANGRPITPS 364
Query: 375 EIVDFIRRD 383
EI+ ++ +
Sbjct: 365 EIIAKVKEN 373
>gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
>gi|6685587|sp|O29781|KORA_ARCFU 2-OXOGLUTARATE SYNTHASE
SUBUNIT KORA (2-KETOGLUTARATE OXIDOREDUCTASE ALPHA
CHAIN) (KOR) (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE
ALPHA SUBUNIT) >gi|7433685|pir||E69308
2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain korA - Archaeoglobus fulgidus
>gi|2650159|gb|AAB90768.1| (AE001072) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
Length = 346
Score = 278 bits (704), Expect = 7e-74
Identities = 153/336 (45%), Positives = 209/336 (61%), Gaps = 28/336 (8%)
Query: 11 DFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAI 70
+ IQG+EA R AI AGC F+AGYPITP+SEI MA +P GV IQMEDEIASI+A+
Sbjct: 4 ELIQGNEAAVRGAINAGCNFFAGYPITPSSEIAHGMAELLPKFGGVFIQMEDEIASISAV 63
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
IGAS AGA AMTATSGPGFSLMQE +GYA +TE+P+V+ +V R GPSTG PT PSQGD M
Sbjct: 64 IGASMAGAVAMTATSGPGFSLMQEGMGYAAITESPVVIFNVMRAGPSTGIPTAPSQGDAM 123
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPE 190
Q+ +G+HGD+ ++VL+P++V++ + T+ AF +A ++ TPVI+LSD VGHMRE V +P
Sbjct: 124 QARYGSHGDYPIVVLAPASVKDMYYLTVEAFKIAFRFSTPVIVLSDEIVGHMRESVALPP 183
Query: 191 PDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVER 250
EIE ++ + G R + TGL H E G P T +
Sbjct: 184 LGEIESYEKRAKNLID----------------------GRRRHRTGLVHTENGLP-TTDL 220
Query: 251 EVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKA 310
E +E+++R + K D F R + V V G R A + K L E G+ A
Sbjct: 221 EEYEKLLRLLFAKF-----DDFRPMVRFEGEEGVLFVAYGSSYRLAKSSAKLLAEKGVSA 275
Query: 311 GLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQL 346
G+LK+ +++PF + + + + K + + VPEMN GQ+
Sbjct: 276 GILKLESLFPFPEDAVRRYSKKADLVVVPEMNAGQV 311
>pir||E64593 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Helicobacter pylori (strain 26695)
>gi|2313707|gb|AAD07654.1| (AE000572) ferredoxin
oxidoreductase, alpha subunit [Helicobacter pylori
26695]
Length = 375
Score = 261 bits (660), Expect = 1e-68
Identities = 145/366 (39%), Positives = 217/366 (58%), Gaps = 7/366 (1%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIGAS 74
G+E +A+AAI GCRF+ GYPITP+S+I AM++ +P G IQMEDEI+ I+ +GAS
Sbjct: 8 GNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGAS 67
Query: 75 WAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQSIW 134
+G K+MTA+SGPG SL E IGY+ M E P+V+ DV R GPSTG PT +QGD+
Sbjct: 68 MSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLRH 127
Query: 135 GTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEPDEI 194
HGD + L+P+ ++EA+ T+RAFNLAE TPV LL D VGHM +V IP+ +E+
Sbjct: 128 PIHGDFKAVALAPANLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEV 187
Query: 195 E--IVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVEREV 252
+ +NRK +++ P+G + P F +GYR +V+GL H G P T + ++
Sbjct: 188 QKMTINRKEFLGDKKDYKPYGVAQDEPAVLNPFF-KGYRYHVSGLHHGPIGFP-TEDAKI 245
Query: 253 HERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL-RELGIKAG 311
+I R+ KIE + I + E +L+ AE+ ++ G V+ + A+K+ +E K G
Sbjct: 246 GGDLIDRLFNKIESKQDIINENEEMDLEGAEIVVIAYGSVSLAVKEALKDYHKESKQKVG 305
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
+ T+WP + +++I K E+I V E+N GQ + K V + + G
Sbjct: 306 FFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRK--VHFLGQANGRTI 363
Query: 372 TPMEIV 377
+P +I+
Sbjct: 364 SPKQII 369
>pir||G71919 chain of 2-oxoglutarate oxidoreductase - Helicobacter pylori
(strain J99) >gi|4155084|gb|AAD06119.1| (AE001486)
SUBUNIT OF 2-OXOGLUTARATE OXIDOREDUCTASE [Helicobacter
pylori J99]
Length = 375
Score = 258 bits (653), Expect = 7e-68
Identities = 145/366 (39%), Positives = 215/366 (58%), Gaps = 7/366 (1%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIGAS 74
G+E +A+AAI GCRF+ GYPITP+S+I AM++ +P G IQMEDEI+ I+ +GAS
Sbjct: 8 GNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGAS 67
Query: 75 WAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQSIW 134
+G K+MTA+SGPG SL E IGY+ M E P+V+ DV R GPSTG PT +QGD+
Sbjct: 68 MSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLRH 127
Query: 135 GTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEPDEI 194
HGD + L+P+ ++EA+ T+RAFNLAE TPV LL D VGHM +V IP+ +E+
Sbjct: 128 PIHGDFKAVALAPANLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEV 187
Query: 195 E--IVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVEREV 252
+ +NRK +++ P+G + P F +GYR +V+GL H G P T + ++
Sbjct: 188 QKMTINRKEFAGDKKDYKPYGVAQDEPAVLNPFF-KGYRYHVSGLHHGPIGFP-TEDAKI 245
Query: 253 HERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL-RELGIKAG 311
+I R+ KIE + I + E +L+ E+ I+ G V+ + A+K+ +E K G
Sbjct: 246 GGDLIDRLFHKIESKQDIINENEEMDLEGTEIVIIAYGSVSLAVKEALKDYNKESKQKVG 305
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
+ T+WP + +++I K E+I V E+N GQ + K V + G
Sbjct: 306 FFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERVMQRK--VHFFGQANGRTI 363
Query: 372 TPMEIV 377
+P +I+
Sbjct: 364 SPKQII 369
>gb|AAC38211.1| (AF021094) OorA subunit of 2-oxoglutarate:acceptor oxidoreductase
[Helicobacter pylori]
Length = 371
Score = 256 bits (647), Expect = 3e-67
Identities = 141/334 (42%), Positives = 205/334 (61%), Gaps = 5/334 (1%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIGAS 74
G+E +A+AAI GCRF+ GYPITP+S+I AM++ +P G IQMEDEI+ I+ +GAS
Sbjct: 8 GNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPNCGGHFIQMEDEISGISVSLGAS 67
Query: 75 WAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQSIW 134
+G K+MTA+SGPG SL E IGY+ M E P+V+ DV R GPSTG PT QGD+
Sbjct: 68 MSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVDQGDVNFLRH 127
Query: 135 GTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEPDEI 194
HGD + L+P++++EA+ T RAFNLAE TPV LL D VGHM +V IP+ +E+
Sbjct: 128 PIHGDFKAVALAPASLEEAYTETARAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEV 187
Query: 195 E--IVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVEREV 252
+ +NRK +++ P+G + P F +GYR +V+GL H G P T + ++
Sbjct: 188 QKTTINRKEFVGDKKDYKPYGVAQDEPAVLNPFF-KGYRYHVSGLHHGPIGFP-TEDAKI 245
Query: 253 HERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL-RELGIKAG 311
+I R+ KIE + I + E +L+ AE+ I+ G V+ + A+K+ +E K G
Sbjct: 246 GGDLIDRLFNKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESNQKVG 305
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQ 345
+ T+WP + +++I K E+I V E+N GQ
Sbjct: 306 FFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQ 339
>pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (strain MSB8)
>gi|4982338|gb|AAD36824.1|AE001814_6 (AE001814)
2-oxoisovalerate oxidoreductase, beta subunit, putative
[Thermotoga maritima]
Length = 356
Score = 240 bits (605), Expect = 3e-62
Identities = 148/366 (40%), Positives = 203/366 (55%), Gaps = 29/366 (7%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
++G+EAIA +AI AGCR Y YPITP SEI E MA +P V GV +Q E EIA++ + G
Sbjct: 9 MKGNEAIAESAIRAGCRLYFAYPITPQSEIAEYMARRLPEVGGVFLQTESEIATVNMVYG 68
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ G + MT+TS PGFSLMQE I Y E P V VDV RGGP G PSQGD Q+
Sbjct: 69 AACTGKRVMTSTSSPGFSLMQEGISYIAGAELPCVFVDVVRGGPGLGN-IQPSQGDYFQA 127
Query: 133 I-WGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
+ G HGD+ LIVL+PST+QEA D T AF+LA++YR PV++L+D +G M E V +PE
Sbjct: 128 VKGGGHGDYRLIVLAPSTLQEAVDLTQLAFDLADRYRNPVLILADGMIGQMMEPVELPEM 187
Query: 192 DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVERE 251
++ LP + + A RG R R ++
Sbjct: 188 RDLST----LPDHSDWAL------------------RGARN-----REPHRIAAFNIDPV 220
Query: 252 VHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAG 311
E++ +R+ EK + +E +D AE +V G + R + LRE GI AG
Sbjct: 221 GLEKMNKRLQEKYRLIEASEQRWEEYRVDGAEYLMVGYGTMGRILKSVVDSLREEGIPAG 280
Query: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
L + T+WPF ++++A KV+ I+V EM+ GQ+ V+ GK V ++GG V
Sbjct: 281 LFRPVTLWPFPKRRLKELAKKVQLIFVVEMSSGQMVEDVQISVEGKVPVHFYGRMGGVVP 340
Query: 372 TPMEIV 377
TP EI+
Sbjct: 341 TPEEIL 346
>dbj|BAB06093.1| (AP001515) pyruvate synthase alpha subunit [Bacillus halodurans]
Length = 579
Score = 210 bits (528), Expect = 3e-53
Identities = 138/380 (36%), Positives = 207/380 (54%), Gaps = 16/380 (4%)
Query: 9 KADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIA 68
K F+ G++AI A+ AG RF A YPITPASEI E + +P G VIQ EDEIA+
Sbjct: 196 KRMFMIGNDAIGMGAVAAGSRFMAAYPITPASEIMEYLIKKLPEFGGAVIQTEDEIAACT 255
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGD 128
IGA++AG ++ TA++GPG SLM E IG + MTETP+V+VD QRGGPS G PT Q D
Sbjct: 256 MAIGANYAGVRSFTASAGPGLSLMAEAIGLSGMTETPLVIVDTQRGGPSIGLPTKQEQSD 315
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYI 188
+M I+ THGD +V++PSTV+EAF T+ AFN+AE+Y+ PVIL++D + ++ V
Sbjct: 316 LMAMIYSTHGDIPKVVMAPSTVEEAFYDTVEAFNIAEEYQCPVILVTDLALSLGKQTVEP 375
Query: 189 PEPDEIEIVNRKLPQNEEEAKLPFGDPHGDF------VPPMPIFG-RGYRTYVTGLTHDE 241
+ ++EI L ++ + G+ + + V P + G + +VTG+ HD+
Sbjct: 376 LDFSKVEIRRGSLQNEDQLTEQEKGEYYKRYELTETGVSPRVLPGQKNGIHHVTGVEHDQ 435
Query: 242 RGRP---RTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSAL- 297
G+P T E E+ +R++ ER + + E D V + + R A+
Sbjct: 436 TGKPSESATNRIEQMEKRLRKVEALPERFPTPVHIHAPHEEPDLLVIGINS---TRGAIE 492
Query: 298 RAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN-LGQLYHLVREGANG 356
AI L I+ I + PF ++ K +++ V E N QL L++ +
Sbjct: 493 EAIPRLEADSIRVNHAHIRLVHPFPKHELQPYLTKAKKVVVVEHNATAQLASLIKMNCDV 552
Query: 357 KAEVKLISKIGGEVHTPMEI 376
KA ++ + + G P EI
Sbjct: 553 KA-IENVLRYDGNPFLPGEI 571
>gb|AAG19013.1| (AE005001) pyruvate ferredoxin oxidoreductase, subunit alpha; PorA
[Halobacterium sp. NRC-1]
Length = 582
Score = 202 bits (509), Expect = 5e-51
Identities = 123/304 (40%), Positives = 173/304 (56%), Gaps = 16/304 (5%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
+ GDEAI AI AGCRFYAGYPITPA+++ E + + G V+Q EDE+A+I +G
Sbjct: 202 LNGDEAIGMGAIAAGCRFYAGYPITPATDVMEYLTGRIEQFGGHVVQAEDELAAINLALG 261
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AGA++MTATSGPG LM E G +ETP+V+ +V R GPSTG PT QGD+
Sbjct: 262 AARAGARSMTATSGPGIDLMSETFGLVATSETPLVIANVMRSGPSTGMPTKQEQGDLNMM 321
Query: 133 IWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP- 191
+ G HG+ V++P++V E F T+ AFNLAEKY+ PV + +D + + ER Y PE
Sbjct: 322 LKGGHGEIPRFVVAPTSVAECFHKTVEAFNLAEKYQLPVYVTADLSMA-VTERTYPPEEF 380
Query: 192 --DEIEIVNRKLP--------QNEEEAKLPFGDPHGDFVPPMPIFG-RGYRTYVTGLTHD 240
D +EI KL QN+ E P D D + P + G G TGL HD
Sbjct: 381 DMDAVEIERGKLVDEDEISAWQNDTEQFRPHADT-ADGISPRAVPGTEGGVHMSTGLEHD 439
Query: 241 ERGRPRTVEREVHERVIRRIVEKIE-RNKKDIFDYEARELDDAEVAIVTTGIVARSALRA 299
E GR RT + +V + + K++ +++ FDY DA+ +V+ G + + A
Sbjct: 440 ELGR-RTEDTDVRVDQVDKRYRKVDTAREREQFDYREFGDSDADNLVVSWGSNEGTIVEA 498
Query: 300 IKEL 303
++ L
Sbjct: 499 LEYL 502
>pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621790|gb|AAB85209.1| (AE000849) 2-oxoisovalerate
oxidoreductase, beta subunit [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 196 bits (494), Expect = 3e-49
Identities = 136/378 (35%), Positives = 198/378 (51%), Gaps = 48/378 (12%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
++G+ A+ A+ AGC Y GYPITPASEI + Y P+V +Q E E A+I + G
Sbjct: 2 VKGNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPMVGRKFVQAESEEAAINMVYG 61
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AG + MTA+SGPG SL QE I + E P V+VDV R GP G P QGD Q
Sbjct: 62 AAAAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGN-IGPEQGDYNQI 120
Query: 133 I-WGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPE- 190
+ G HG++ +VL+PS+VQE D T+ AF LA+KYR PV++L+DA +G M E + PE
Sbjct: 121 VKGGGHGNYRNMVLAPSSVQEMCDLTMEAFELADKYRNPVVVLTDAVLGQMAEPLRFPEE 180
Query: 191 -----PDEIEIV--NRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERG 243
PD V NR+ +N VT + D
Sbjct: 181 AVEHRPDTSWAVCGNRETMKN----------------------------LVTSIFLD--- 209
Query: 244 RPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL 303
E E ++ +IE N+ YE +DDAE+ +V GI +R A A++
Sbjct: 210 ---FDELEEFNFYLQEKYARIEENE---VRYEEYLVDDAEIVMVAYGISSRVARSAVETA 263
Query: 304 RELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLI 363
R GI GLL+ T++PF + I ++A R EM+ GQ+ +R A+G +V+L+
Sbjct: 264 RAEGINVGLLRPITLFPFPSDRIRELADGGCRFISVEMSSGQMREDIRM-ASGCRDVELV 322
Query: 364 SKIGGEVHTPMEIVDFIR 381
+++GG + ++++ IR
Sbjct: 323 NRMGGNLIELRDVLEKIR 340
>sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE BETA SUBUNIT)
Length = 352
Score = 196 bits (494), Expect = 3e-49
Identities = 136/378 (35%), Positives = 198/378 (51%), Gaps = 48/378 (12%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
++G+ A+ A+ AGC Y GYPITPASEI + Y P+V +Q E E A+I + G
Sbjct: 6 VKGNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPMVGRKFVQAESEEAAINMVYG 65
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AG + MTA+SGPG SL QE I + E P V+VDV R GP G P QGD Q
Sbjct: 66 AAAAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGN-IGPEQGDYNQI 124
Query: 133 I-WGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPE- 190
+ G HG++ +VL+PS+VQE D T+ AF LA+KYR PV++L+DA +G M E + PE
Sbjct: 125 VKGGGHGNYRNMVLAPSSVQEMCDLTMEAFELADKYRNPVVVLTDAVLGQMAEPLRFPEE 184
Query: 191 -----PDEIEIV--NRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERG 243
PD V NR+ +N VT + D
Sbjct: 185 AVEHRPDTSWAVCGNRETMKN----------------------------LVTSIFLD--- 213
Query: 244 RPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL 303
E E ++ +IE N+ YE +DDAE+ +V GI +R A A++
Sbjct: 214 ---FDELEEFNFYLQEKYARIEENE---VRYEEYLVDDAEIVMVAYGISSRVARSAVETA 267
Query: 304 RELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLI 363
R GI GLL+ T++PF + I ++A R EM+ GQ+ +R A+G +V+L+
Sbjct: 268 RAEGINVGLLRPITLFPFPSDRIRELADGGCRFISVEMSSGQMREDIRM-ASGCRDVELV 326
Query: 364 SKIGGEVHTPMEIVDFIR 381
+++GG + ++++ IR
Sbjct: 327 NRMGGNLIELRDVLEKIR 344
>pir||A72519 probable 2-oxoacid--ferredoxin oxidoreductase alpha chain APE2126 -
Aeropyrum pernix (strain K1) >gi|5105825|dbj|BAA81137.1|
(AP000063) 644aa long hypothetical 2-oxoacid--ferredoxin
oxidoreductase alpha chain [Aeropyrum pernix]
Length = 644
Score = 186 bits (467), Expect = 4e-46
Identities = 129/359 (35%), Positives = 192/359 (52%), Gaps = 35/359 (9%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL-VDG------VVIQMEDEIASI 67
G++ +A ++ G R+ A YPITPAS+ + + L +DG ++Q EDEIA++
Sbjct: 252 GNDVVAMGKVVGGVRYQAYYPITPASDESVLLEEFEGLKIDGESLGSIAILQTEDEIAAV 311
Query: 68 AAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQG 127
+++IGA+ GA+A TATSGPGFSLM E +G+A + P+V+ QRGGPSTG PT SQ
Sbjct: 312 SSVIGAALTGARASTATSGPGFSLMVEALGWAGKNDVPMVITYYQRGGPSTGLPTRGSQS 371
Query: 128 DIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVY 187
D++ S++ +HG+ I+LS EAF I A+NLAE+++ PVI L D + +M V
Sbjct: 372 DLLFSLFASHGEFPRIILSSGDHLEAFYDAIEAYNLAERFQMPVIHLLDKFLANMVASVP 431
Query: 188 IPEPDEIEIVNRKLPQNEEEAKLPFGD----PHGDFVPPMPIFGRGYRTYVTGLTHDERG 243
P+ I K+ + + K P G P + P+ G G T+ TG +DE G
Sbjct: 432 FPDWKAI-----KIDRGKTLFKAPTGPFKRFPRDQPLADRPVLGSGAITWYTGDENDEYG 486
Query: 244 RPRTVEREVHERVIRRIVEKIERNKK-DIFDYEARE--------LDDAEVAIVTTGIVAR 294
+ E + R+V R KK +I D E E +DAEV +V G V
Sbjct: 487 -------HIDEDPVNRLVMYERRWKKMEIADREIPEDFRVKYYGDEDAEVLLVGWGSVKI 539
Query: 295 SALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGK--VERIYVPEMN-LGQLYHLV 350
AL AI+ LRE+G+ A L + + P + ++ + +R+ E N LGQ +V
Sbjct: 540 PALEAIERLREMGVNAAYLHLRMLSPLPKRRVSEVLSRFDADRVIAVEANYLGQASKIV 598
>pir||A72627 probable 2-oxoacid--ferredoxin oxidoreductase, alpha chain APE1473
- Aeropyrum pernix (strain K1)
>gi|5105157|dbj|BAA80471.1| (AP000061) 616aa long
hypothetical 2-oxoacid--ferredoxin oxidoreductase ,
alpha chain [Aeropyrum pernix]
Length = 616
Score = 184 bits (463), Expect = 1e-45
Identities = 139/398 (34%), Positives = 206/398 (50%), Gaps = 44/398 (11%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL-----VDG-------------V 56
G++ +A I+ G YPITP+S+ ALY+ +DG
Sbjct: 218 GNDLVAMGKIVGGLGVITYYPITPSSD----EALYVEKHSYISIDGPLAEKLGYDKIAVA 273
Query: 57 VIQMEDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGP 116
++QMEDE+ASI A++GA+ AGA+A T TSGPGFSLM E + AV E P+VV R GP
Sbjct: 274 IVQMEDELASINAVLGAAAAGARASTTTSGPGFSLMNEAVSLAVEAEIPVVVTLWMRAGP 333
Query: 117 STGQPTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSD 176
STG PT Q D++ SI+ HGD IVL+ EAF I+AFN AE+++TPVI L D
Sbjct: 334 STGMPTRTGQQDLLHSIFSGHGDAPKIVLASGDHVEAFYDAIKAFNWAEEFQTPVIHLLD 393
Query: 177 -----AEVGHMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYR 231
+ V RE + +P ++ I KL N A + D + P G
Sbjct: 394 KYLASSMVSLAREDL---DPSKVPITRGKLLDN-PPADYRRYEVVEDGISPRARLGSA-T 448
Query: 232 TYVTGLTHDERG--RPRTVEREV----HERVIRRIVEKIERNKKDIFDYEARELDDAEVA 285
+TGL HDE G V RE+ ER + I E+I +K + ++ +A VA
Sbjct: 449 MVITGLEHDEYGYATEDPVMREIMMFKRERKFKVIEERIPDEEKAVLHGDS----EASVA 504
Query: 286 IVTTGIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN-LG 344
+V+ G + L A++ LR+ G++A ++ ++PF L+E++ VE++ + E N LG
Sbjct: 505 LVSFGSTKQPILEALEMLRDEGVRARFAQVRLLYPFPGRLVEEMLEGVEKVIMVEQNLLG 564
Query: 345 QLYHLVREGANGKAEVKLISKIGGEVHTPMEIVDFIRR 382
QL L+R + K + ++ KI G E+ ++R
Sbjct: 565 QLAMLLRAHTSIKPDSSIV-KINGRPLYSFEVAGAVKR 601
>pir||S22396 pyruvate synthase (EC 1.2.7.1) alpha chain [validated] -
Halobacterium salinarum >gi|43498|emb|CAA45825.1|
(X64521) pyruvate synthase [Halobacterium halobium]
Length = 628
Score = 176 bits (442), Expect = 4e-43
Identities = 127/397 (31%), Positives = 192/397 (47%), Gaps = 25/397 (6%)
Query: 6 PVGKAD----FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQME 61
P G D + G AIA AI AGCRF +GYP+TP ++ F M +P + GV Q+E
Sbjct: 212 PTGSHDEPQVLMSGSHAIAYGAIDAGCRFISGYPMTPWTDAFTIMTQLLPDMGGVSEQVE 271
Query: 62 DEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQP 121
DEIA+ A +GAS AGAKAM+ +SG GF+LM E +G A MTETP+V+++ QR GPSTG P
Sbjct: 272 DEIAAAAMAVGASHAGAKAMSGSSGGGFALMSEPLGLAEMTETPLVLLEAQRAGPSTGMP 331
Query: 122 TLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGH 181
T P Q D+ ++ + GD + P +E ++ T AF +A Y+ PVILL D ++
Sbjct: 332 TKPEQADLEHVLYTSQGDSHRVAFGPKDPKECYEQTRTAFEIAYDYQIPVILLYDQKLSG 391
Query: 182 MRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHG----------DFVPPMPIFGR-GY 230
V D + +E++ DP G D V P I G+ G
Sbjct: 392 EYRNVDASFFDREPAADLGTTLSEDQIPDAPHDPTGKYHRYQHDVEDGVSPRTIPGQSGG 451
Query: 231 RTYVTGLTHDERGRPRTVEREVHERV--IRRIVEKIERNKKDIFDYEAREL---DDAEVA 285
R +G H G + + RV + R ++K+ + D+ + + + +DA++
Sbjct: 452 RYLASGNEHWPNGH---ISEDTDNRVAQVERRLQKLAAIRDDLDERDQQTHYGDEDADIG 508
Query: 286 IVTTGIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQ 345
++ G + A+ L + G L I+ + PF V+ V EM+ +
Sbjct: 509 LIAWGSQEGTVEEAVHRLNDDGNSVKALGISDLAPFPVAETRAFVDSVDEAIVVEMSSTK 568
Query: 346 LYHLVREGANGKAEVKLIS--KIGGEVHTPMEIVDFI 380
+ + + G KL S K G P EIV+ +
Sbjct: 569 QFRGLIQKEVGDIGGKLSSLLKYNGNPFEPAEIVEAV 605
>gb|AAG19514.1| (AE005043) putative 2-ketoglutarate ferredoxin oxidoreductase
(alpha); KorA [Halobacterium sp. NRC-1]
Length = 640
Score = 176 bits (442), Expect = 4e-43
Identities = 127/397 (31%), Positives = 192/397 (47%), Gaps = 25/397 (6%)
Query: 6 PVGKAD----FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQME 61
P G D + G AIA AI AGCRF +GYP+TP ++ F M +P + GV Q+E
Sbjct: 224 PTGSHDEPQVLMSGSHAIAYGAIDAGCRFISGYPMTPWTDAFTIMTQLLPDMGGVSEQVE 283
Query: 62 DEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQP 121
DEIA+ A +GAS AGAKAM+ +SG GF+LM E +G A MTETP+V+++ QR GPSTG P
Sbjct: 284 DEIAAAAMAVGASHAGAKAMSGSSGGGFALMSEPLGLAEMTETPLVLLEAQRAGPSTGMP 343
Query: 122 TLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGH 181
T P Q D+ ++ + GD + P +E ++ T AF +A Y+ PVILL D ++
Sbjct: 344 TKPEQADLEHVLYTSQGDSHRVAFGPKDPKECYEQTRTAFEIAYDYQIPVILLYDQKLSG 403
Query: 182 MRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHG----------DFVPPMPIFGR-GY 230
V D + +E++ DP G D V P I G+ G
Sbjct: 404 EYRNVDASFFDREPAADLGTTLSEDQIPDAPHDPTGKYHRYQHDVEDGVSPRTIPGQSGG 463
Query: 231 RTYVTGLTHDERGRPRTVEREVHERV--IRRIVEKIERNKKDIFDYEAREL---DDAEVA 285
R +G H G + + RV + R ++K+ + D+ + + + +DA++
Sbjct: 464 RYLASGNEHWPNGH---ISEDTDNRVAQVERRLQKLAAIRDDLDERDQQTHYGDEDADIG 520
Query: 286 IVTTGIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQ 345
++ G + A+ L + G L I+ + PF V+ V EM+ +
Sbjct: 521 LIAWGSQEGTVEEAVHRLNDDGNSVKALGISDLAPFPVAETRAFVDSVDEAIVVEMSSTK 580
Query: 346 LYHLVREGANGKAEVKLIS--KIGGEVHTPMEIVDFI 380
+ + + G KL S K G P EIV+ +
Sbjct: 581 QFRGLIQKEVGDIGGKLSSLLKYNGNPFEPAEIVEAV 617
>emb|CAB60189.1| (AL132824) putative oxidoreductase alpha-subunit [Streptomyces
coelicolor]
Length = 630
Score = 175 bits (438), Expect = 1e-42
Identities = 124/362 (34%), Positives = 184/362 (50%), Gaps = 21/362 (5%)
Query: 5 FPVGKADFIQGDEAIARAAILAGCR-----FYAGYPITPASEIFEAMALYMPLVDGV-VI 58
FP G I G+ A+A I A R F YPITPAS+I ++ + GV
Sbjct: 242 FPPGTYRNISGNLALAYGLIAASRRADLPLFLGSYPITPASDILHELSKHKNF--GVRTF 299
Query: 59 QMEDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPST 118
Q EDEIA I A +GA++ GA A+T TSGPG +L E IG AV E P++VVD+QRGGPST
Sbjct: 300 QAEDEIAGIGAALGAAFGGALAVTTTSGPGVALKSETIGLAVSLELPLLVVDIQRGGPST 359
Query: 119 GQPTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAE 178
G PT Q D++Q+++G +G+ + VL+P T + FD + A +A YRTPV LLSD
Sbjct: 360 GLPTKTEQADLLQAMFGRNGEAPVAVLAPQTAADCFDAALEAARIALAYRTPVFLLSDGY 419
Query: 179 VGHMRERVYIPEPDEIEIVNRKLPQ-------NEEEAKLPF-GDPHGDFVPPMPIFGR-G 229
+ + E IPEPDE+ + + Q + E P+ DPH P + G G
Sbjct: 420 LANGSEPWRIPEPDELPDLTVQFAQGPNHTLDDGSEVFWPYKRDPH-TLARPWAVPGTPG 478
Query: 230 YRTYVTGLTHDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTT 289
+ G+ + + + H+ ++R KI+ + D + D A ++
Sbjct: 479 LEHRIGGIEKQDGTGNISYDPANHDFMVRTRQAKID--GITVPDLAVDDPDGARTLVLGW 536
Query: 290 GIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHL 349
G A++ +R+ + + + PF L + + +++ VPEMNLGQL L
Sbjct: 537 GSTYGPITAAVRRIRKEVGQIAQAHLRHLNPFPANL-GAVLERYDKVVVPEMNLGQLATL 595
Query: 350 VR 351
+R
Sbjct: 596 IR 597
>emb|CAC08296.1| (AL392148) putative oxidoreductase [Streptomyces coelicolor]
Length = 645
Score = 175 bits (438), Expect = 1e-42
Identities = 124/362 (34%), Positives = 184/362 (50%), Gaps = 21/362 (5%)
Query: 5 FPVGKADFIQGDEAIARAAILAGCR-----FYAGYPITPASEIFEAMALYMPLVDGV-VI 58
FP G I G+ A+A I A R F YPITPAS+I ++ + GV
Sbjct: 257 FPPGTYRNISGNLALAYGLIAASRRADLPLFLGSYPITPASDILHELSKHKNF--GVRTF 314
Query: 59 QMEDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPST 118
Q EDEIA I A +GA++ GA A+T TSGPG +L E IG AV E P++VVD+QRGGPST
Sbjct: 315 QAEDEIAGIGAALGAAFGGALAVTTTSGPGVALKSETIGLAVSLELPLLVVDIQRGGPST 374
Query: 119 GQPTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAE 178
G PT Q D++Q+++G +G+ + VL+P T + FD + A +A YRTPV LLSD
Sbjct: 375 GLPTKTEQADLLQAMFGRNGEAPVAVLAPQTAADCFDAALEAARIALAYRTPVFLLSDGY 434
Query: 179 VGHMRERVYIPEPDEIEIVNRKLPQ-------NEEEAKLPF-GDPHGDFVPPMPIFGR-G 229
+ + E IPEPDE+ + + Q + E P+ DPH P + G G
Sbjct: 435 LANGSEPWRIPEPDELPDLTVQFAQGPNHTLDDGSEVFWPYKRDPH-TLARPWAVPGTPG 493
Query: 230 YRTYVTGLTHDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTT 289
+ G+ + + + H+ ++R KI+ + D + D A ++
Sbjct: 494 LEHRIGGIEKQDGTGNISYDPANHDFMVRTRQAKID--GITVPDLAVDDPDGARTLVLGW 551
Query: 290 GIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHL 349
G A++ +R+ + + + PF L + + +++ VPEMNLGQL L
Sbjct: 552 GSTYGPITAAVRRIRKEVGQIAQAHLRHLNPFPANL-GAVLERYDKVVVPEMNLGQLATL 610
Query: 350 VR 351
+R
Sbjct: 611 IR 612
>pir||F70864 probable oxidoreductase alpha subunit - Mycobacterium tuberculosis
(strain H37RV) >gi|2791495|emb|CAA16032.1| (AL021246)
hypothetical protein Rv2455c [Mycobacterium
tuberculosis]
Length = 653
Score = 169 bits (424), Expect = 5e-41
Identities = 123/385 (31%), Positives = 191/385 (48%), Gaps = 18/385 (4%)
Query: 6 PVGKADFIQGDEAIARAAILAGCR-----FYAGYPITPASEIFEAMALYMPLVDGVVIQM 60
P G+ I G+ A+A ++AG YPITPAS+I ++ + + V Q
Sbjct: 247 PPGEYRQISGNTALAYGIVVAGQLAGLPVVLGSYPITPASDILHELSKHKNF-NVVTFQA 305
Query: 61 EDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQ 120
EDEI I A +GA++ GA +T+TSGPG SL E +G VMTE P++V+DVQRGGPSTG
Sbjct: 306 EDEIGGICAALGAAYGGALGVTSTSGPGISLKSEALGLGVMTELPLLVIDVQRGGPSTGL 365
Query: 121 PTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG 180
PT Q D++Q+++G +G+ + VL+P + + F+ + A +A Y TPVILLSD +
Sbjct: 366 PTKTEQADLLQALYGRNGESPVAVLAPRSPADCFETALEAVRIAVSYHTPVILLSDGAIA 425
Query: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGR-GYRTYVTGLTH 239
+ E IP+ + + + + E + P+ I G G + GL
Sbjct: 426 NGSEPWRIPDVNALPPIKHTFAKPGEPFQ-PYARDRETLARQFAIPGTPGLEHRIGGLEA 484
Query: 240 DERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARE-LDDAEVAIVTTGIVARSALR 298
+ E H+ ++R KI+ + D E + DAE+ ++ G
Sbjct: 485 ANGSGDISYEPTNHDLMVRLRQAKID--GIHVPDLEVDDPTGDAELLLIGWGSSYGPIGE 542
Query: 299 AIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGK- 357
A + R G K + + PF L E + + ++ PE+NLGQL ++R GK
Sbjct: 543 ACRRARRRGTKVAHAHLRYLNPFPANLGE-VLRRYPKVVAPELNLGQLAQVLR----GKY 597
Query: 358 -AEVKLISKIGGEVHTPMEIVDFIR 381
+V+ ++K+ G EI FIR
Sbjct: 598 LVDVQSVTKVKGVSFLADEIGRFIR 622
>emb|CAC11404.1| (AL445063) probable pyruvate ferredoxin oxidoreductase, alpha
subunit [Thermoplasma acidophilum]
Length = 588
Score = 167 bits (419), Expect = 2e-40
Identities = 115/381 (30%), Positives = 189/381 (49%), Gaps = 9/381 (2%)
Query: 5 FPVGKADF-IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDE 63
F GK + I G A+A A+ G + Y YP+TPAS +A + V EDE
Sbjct: 199 FKFGKKKYMISGGMAVALGAVAGGLKMYVAYPMTPASSALHFLAQHAKKYGVFVKIPEDE 258
Query: 64 IASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTL 123
I++I +IGA++AG +AMT +SG GF+LM E +G + MTE P+V+ + QR GPSTG PT
Sbjct: 259 ISAINTVIGANYAGVRAMTGSSGGGFALMTEAVGLSGMTEVPLVIYEAQRPGPSTGLPTK 318
Query: 124 PSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMR 183
QGD+ Q + + GD IV +P ++EAF T A N+AEKY+TPV ++SD +
Sbjct: 319 TEQGDLNQVLGASQGDFPRIVFAPGDIEEAFYLTREAMNIAEKYQTPVFVMSDLYLAEHY 378
Query: 184 ERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGR-GYRTYVTGLTHDER 242
+ + + + + NE++ K G + P I G+ G H+E
Sbjct: 379 DTIDSFDLNFNIDHGLRAKDNEQDYKRYLITETG--ISPRAIPGQPGNMHNEDSDEHNEY 436
Query: 243 G---RPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRA 299
G + +++++ + K++ +++ + DAE I+ G + A
Sbjct: 437 GDVVSDAVTNPQDRIKMMQKRMRKLDTYIEEMKPTPTYRIQDAEYVIIQWGSTKGAVEEA 496
Query: 300 IKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAE 359
I LR GIK G +++ ++P + ++ + + + + V GQL + A +
Sbjct: 497 IDILRAKGIKIGAIEVKNVFPLNPDIGTLLKNRKKILAVENNYSGQLSKYI--AAQFLVK 554
Query: 360 VKLISKIGGEVHTPMEIVDFI 380
+LI+K GE P + + I
Sbjct: 555 PELITKYDGEAFYPNALAEEI 575
>emb|CAC11904.1| (AL445065) probable 2-oxoacid ferredoxin oxidoreductase, alpha
chain [Thermoplasma acidophilum]
Length = 629
Score = 167 bits (419), Expect = 2e-40
Identities = 113/353 (32%), Positives = 176/353 (49%), Gaps = 20/353 (5%)
Query: 6 PVGKADFIQGDEAIARAAILAGCRFYAGYPITPASEI------------FEAMALYMPLV 53
P + + G++A A +L G RF YPITPAS+ + A +
Sbjct: 226 PTPRKLLLTGNDASALGKLLGGLRFQTYYPITPASDESTTIEEHQNIKWLDKEAANLKKG 285
Query: 54 DGVVIQMEDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQR 113
V++Q EDE++++ IG + G ++ TATSGPGFSLM E + +A M E P+VV +R
Sbjct: 286 GVVIVQTEDELSAVNMAIGGALTGVRSATATSGPGFSLMAEGLSFAGMDEVPLVVTFYER 345
Query: 114 GGPSTGQPTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVIL 173
GGPSTG PT Q D++ ++ HG++ IV S TV E +A N A KY+ PVI
Sbjct: 346 GGPSTGLPTRNGQSDLLFALNAGHGEYPRIVFSSGTVDECIYDAAKALNYAAKYQMPVIH 405
Query: 174 LSDAEVGHMRERVYIPEPDEIEIVNRKLPQNEEEAK-LPFGDPHGDFVPPMPIFGRGYRT 232
L D + + + + + D I+I KL + ++ K +G V P GR
Sbjct: 406 LIDKNLANTLDLISKVDLDRIKIETVKLAKEGDDVKRYDLNTDNG--VSPYTTMGRNI-F 462
Query: 233 YVTGLTHDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEAREL---DDAEVAIVTT 289
++TG HDE G T + ++ +R++ + +K+E ++I E L +A++ VT
Sbjct: 463 WMTGDEHDELGHV-TEDSDIRDRMMEKRFKKLETADREIPIDEKAVLIGEKEADITFVTW 521
Query: 290 GIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
G L I++L+E GI A LL + PF E ++ + + E N
Sbjct: 522 GSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESN 574
>gb|AAK42926.1| 2-oxoacid--ferredoxin oxidoreductase, alpha chain [Sulfolobus
solfataricus]
Length = 632
Score = 164 bits (412), Expect = 1e-39
Identities = 125/349 (35%), Positives = 176/349 (49%), Gaps = 23/349 (6%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASE--IFEAMALYMPLVDG----------VVIQM 60
+ G+ A A I G RF + YPITPAS+ +F + VD VV+Q
Sbjct: 233 LDGNTAAAIGKIYGGLRFQSYYPITPASDESVFIEAHQTVFTVDPKTGEKRKSTIVVVQA 292
Query: 61 EDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQ 120
EDE+A+I GA+ G +A TATSGPGFSLM E +G+A M E P+V+ RGGPSTGQ
Sbjct: 293 EDELAAINMASGAALTGVRAATATSGPGFSLMVEGMGWAGMNEVPVVITYYIRGGPSTGQ 352
Query: 121 PTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVG 180
PT SQ D+M ++ HG+ IV++ EAF A NLA+KY+TPVI L D +
Sbjct: 353 PTRTSQADLMFALNAGHGEFPRIVIASGDHVEAFHDGTWALNLAQKYQTPVIHLVDKALA 412
Query: 181 HMRERVYIPEP----DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTG 236
+ IP+ + I I K+ N +L + D + P G R + TG
Sbjct: 413 NSYS--IIPKKTLGMENIRIEKGKIVINTNTPELKRFEITEDGISPFAPLGTA-RVHYTG 469
Query: 237 LTHDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEAREL---DDAEVAIVTTGIVA 293
HDE G E E++ + ++K+ K+I + + D++VAI+T G
Sbjct: 470 DEHDEYGFIAEAS-ENREKMYEKRIKKLMTADKEIPEESRVNVYGNTDSKVAIITWGSPK 528
Query: 294 RSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
+ L A++EL GIK L++I PF L+ K+ E I E N
Sbjct: 529 GAILDAMEELENEGIKPMLIQIRMFSPFPKNLMRKLLNGKEFIIDVESN 577
>pir||B72288 2-oxoacid ferredoxin oxidoreductase, alpha subunit - Thermotoga
maritima (strain MSB8)
>gi|4981713|gb|AAD36240.1|AE001773_9 (AE001773)
2-oxoacid ferredoxin oxidoreductase, alpha subunit
[Thermotoga maritima]
Length = 558
Score = 162 bits (405), Expect = 8e-39
Identities = 111/343 (32%), Positives = 178/343 (51%), Gaps = 13/343 (3%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
+ G EA+ AI GC F + YP++P++ + +A + VV Q EDEIA++ IIG
Sbjct: 195 LNGAEAVGLGAIAGGCNFVSSYPMSPSTSVLVFLAQHKNDFGIVVEQAEDEIAAMNMIIG 254
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A +AGA+ + TSG GF+LM+E + A M E+P V+ QR GP+TG PT QGD+ +
Sbjct: 255 AWYAGARGLVTTSGGGFALMEEALSLAGMIESPAVIHLAQRPGPATGLPTRTEQGDLNLA 314
Query: 133 IWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEPD 192
++ HGD ++ +P V+EAF T +AFN+A+KY+ PV +L+D + + + +
Sbjct: 315 LYAGHGDFPRVIYAPGNVEEAFYLTQKAFNVADKYQVPVFVLTDQYLVDSYYNLPGFDLN 374
Query: 193 EIEIVNRKLPQNEEEAKLPFGDPHGDFVPP--MPIFGRGYRTYVTGLTHDERGRPRTVER 250
E+++ + + + + D + P +P +G G V HDE G T +
Sbjct: 375 ELKVEKHFIKTTRDYIRYAITE---DGISPRGIPGYGEGL-VRVDSDEHDEFGH-ITEDF 429
Query: 251 EVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKA 310
R++ + + K E KK+I + ++ V +V G S L IKE E
Sbjct: 430 NTRVRMVNKRLRKGETLKKEIVKPKLIGDENYRVLLVAWG----STLEPIKEAIEGLDGV 485
Query: 311 GLLKINTIWPFDFELIEKIAGKVERIYVPEMN-LGQLYHLVRE 352
LL + +WP D E + K E++ E N GQ +L+R+
Sbjct: 486 ALLHFSQVWPID-ESVATYFEKAEKVVAVEGNATGQFANLIRQ 527
>emb|CAA75641.1| (Y15464) ferredoxin oxidoreductase-like (gamma and alpha subunit in
fusion) [Thermus thermophilus]
Length = 617
Score = 152 bits (381), Expect = 5e-36
Identities = 116/372 (31%), Positives = 190/372 (50%), Gaps = 19/372 (5%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASE--IFEAMALYMPLVDGVVIQMEDEIASIAA 69
++ G +A A + G RF YPI+PA++ +F ++P D V+Q EDEIA++
Sbjct: 233 YLTGAQAAALGKLAGGLRFQTYYPISPATDESVFLEAHTHLPGADVAVVQTEDEIAAVNM 292
Query: 70 IIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDI 129
+GA+ AGAKA TATSGPGFSLM E +G+A M E P+VV QRG PT QGD+
Sbjct: 293 AVGAALAGAKAATATSGPGFSLMAEGLGFAGMIEAPLVVTLYQRGRAQHRLPTRTEQGDL 352
Query: 130 MQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIP 189
M +I G HG++ +VL+ + +AF +A A +Y+T V+ L D + + + +
Sbjct: 353 MFAIRGGHGEYPRLVLASGDILDAFLDAQKALAWAWRYQTVVVHLLDKFLASLAQSL--- 409
Query: 190 EPDEIEIVN----RKLPQNEEEAKLPFGDPHGDFVPP-MPIFGRGYRTYVTGLTHDERGR 244
+ +++++ ++L E P D + P +PI G ++T HD G
Sbjct: 410 PKEALKVLSLDGEKRLSPREGFGPYQRYAPGEDGLSPFIPIGTPGGFYWMTSDEHDPLGH 469
Query: 245 PRTVEREVHERVIRRIVEKIERNKKDI-FDYEARELDDAEVAIVTTGIVARSALRAIKEL 303
T + E+ E + + +EK+E +K+I + + D EV ++ G V + L A+ L
Sbjct: 470 -ITEDVELRELQMEKRMEKLELARKEIPLEDQYTLFRDGEVLVLGWGTVKGTLLEALDHL 528
Query: 304 RELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLI 363
+ G L + +WPF + + GK + V GQL LV++ + +++
Sbjct: 529 EGV----GYLHLRLLWPFP-RIAPLLEGKT-LVTVEHNYSGQLADLVQQETLKRVHHRVV 582
Query: 364 SKIGGEVHTPME 375
K G +P+E
Sbjct: 583 -KYNGRAPSPLE 593
>pir||JC4919 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
[validated] - Sulfolobus sp. (strain 7)
>gi|1565183|dbj|BAA10898.1| (D64024)
2-oxoacid:ferredoxin oxidoreductase subunit alpha
[Sulfolobus sp. 7]
Length = 632
Score = 152 bits (381), Expect = 5e-36
Identities = 126/380 (33%), Positives = 182/380 (47%), Gaps = 35/380 (9%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPAS------EIFEAMALYMPLVDG------VVIQ 59
++ G+ A+A I G RF + YPITPAS E + + + P+ VV+Q
Sbjct: 231 WLDGNTAVAIGKIYGGVRFQSYYPITPASDESVYIEAHQDVLMEDPITGDKKKGTIVVVQ 290
Query: 60 MEDEIASIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTG 119
EDE+A+I IGA+ G +A TATSGPGFSLM E +G+A M E P+V+ RGGPSTG
Sbjct: 291 AEDELAAINMAIGAALTGVRAATATSGPGFSLMVEGLGWAGMNEVPVVITYYIRGGPSTG 350
Query: 120 QPTLPSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEV 179
PT +Q D++ I+ HG+ IVL+ EAF I A NLAEKY+TPVI L + +
Sbjct: 351 LPTRTAQSDLIFPIFAGHGEFPKIVLASGDHAEAFKDAIWALNLAEKYQTPVIHLVEKTL 410
Query: 180 GHMRERVYIP--EPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGL 237
+ + E D+++ K+ ++ + + F D + P G+ Y TG
Sbjct: 411 ANSYSTIPYEELELDKLKAERGKIVESGDISYKRFKFTE-DGISPRAFLGKA-TMYYTGD 468
Query: 238 THDERGRPRTVEREVHERVIRRIVEKIERNKK-DIFDYEARELDDAEV--------AIVT 288
H+E G + E V+ R + +R KK ++ D E E ++ I+T
Sbjct: 469 EHNEEG-------HISEDVVNRTMMYEKRMKKLEVADKEIPEESRVKIYGDLNSRNLIIT 521
Query: 289 TGIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYH 348
G LR I L E LL+I PF L+ K+ ++I E N
Sbjct: 522 WG-SPTGVLRDI--LEESNFDFTLLQIRMFSPFPKNLVSKLMEGRDKIITVEGNYLAQTS 578
Query: 349 LVREGANGKAEVKLISKIGG 368
L+ + GK I K G
Sbjct: 579 LLVKMYTGKDVTNSILKWNG 598
>pir||G69170 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621610|gb|AAB85042.1| (AE000836)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 512
Score = 142 bits (354), Expect = 7e-33
Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 19/344 (5%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
+ G EA+ I GCRF + YP+TP++ + ++ D V Q EDEIA+I +G
Sbjct: 151 LNGTEAVGIGCIAGGCRFMSSYPMTPSTPLQVFISENAAEFDMVFEQAEDEIAAINMCLG 210
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
AS+AGA+++ ATSG GF+LM+E +G A M ETP+V+ QR GP+ G PT +Q D+ +
Sbjct: 211 ASYAGARSLVATSGSGFALMEEAVGLAGMIETPVVIYIGQRPGPAVGLPTRTAQEDLNLA 270
Query: 133 IWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVY-IPEP 191
++ G+ +L+P +++A + AFNLA++Y+ PV LLSD ++ + Y +P P
Sbjct: 271 LYAGPGEFPRAILAPGKLEDAPEIAAHAFNLADRYQIPVFLLSDQ---YLADLYYDLPSP 327
Query: 192 DEIEIVNRKLPQN-EEEAKLPFGDPHGDFVPPMPIFGRGYRTY-VTGLTHDERGRPRTVE 249
E + + + E + F D + P I G G T V HDE G T +
Sbjct: 328 QIGEEPSYHITRTWEGYRRFEF---TADGISPRGIPGYGSGTVRVDSDEHDEEGL-ITED 383
Query: 250 REVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKE-LRELGI 308
+V R++ + ++E K D E D A++ G S ++E + G
Sbjct: 384 LDVRRRMVEKRNLRLEMLKDDTLKPEV--YGDNSSALICWG----STYWLVREAIESSGA 437
Query: 309 KAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNL-GQLYHLVR 351
++ + ++P + +E + +R V E N GQ L++
Sbjct: 438 DVSMVHFSQVYPLPHDTLE-LLESFDRTAVVENNYRGQFADLLK 480
>gi|11498355 2-oxoacid ferredoxin oxidoreductase, subunit alpha (orA)
[Archaeoglobus fulgidus] >gi|7433693|pir||E69343
2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha
chain orA - Archaeoglobus fulgidus
>gi|2649863|gb|AAB90491.1| (AE001053) 2-oxoacid
ferredoxin oxidoreductase, subunit alpha (orA)
[Archaeoglobus fulgidus]
Length = 532
Score = 131 bits (326), Expect = 1e-29
Identities = 120/389 (30%), Positives = 180/389 (45%), Gaps = 52/389 (13%)
Query: 9 KADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIA 68
K + + G AIA + AG +FY YP+TPAS I +A V +Q E+EIA+I
Sbjct: 178 KKELVSGARAIAEGMLAAGLKFYYAYPMTPASPILHILAADSRCV---ALQPENEIAAIM 234
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGD 128
IG+++ G +A TSG GF+LM E+I A M E P++++ QR GPSTG T +Q D
Sbjct: 235 MAIGSAFGGERAAVGTSGGGFALMSESISLAGMAEVPVLIILAQRSGPSTGMATYTAQQD 294
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYI 188
+ ++ HG+ LIV SP T+++++ NLA +++TP ILL++ H+ E +
Sbjct: 295 LYFALNPAHGEFPLIVASPITIEDSYRLAGELLNLAWQFQTPAILLTEK---HITESLAT 351
Query: 189 PEPD-----EIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIF---GRGYRTYVTGLTHD 240
+ + E+EI K + A G + P IF + Y
Sbjct: 352 AKLEGVVKREVEIFREKGELFKRYAITESG--ISPYAAPPAIFKANSNEHDEYGFATDDA 409
Query: 241 ERGRPRTVEREVHERVIRRIVEKIE-----RNKKDIFDYEARELDDAEVAIVTTGIVARS 295
E +R E IRR+V + +N KD IVT G S
Sbjct: 410 ETATKMYAKRMRKEEEIRRVVANLNPYVVVKNGKD--------------WIVTWG----S 451
Query: 296 ALRAIKEL-RELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN-LGQLYHLVREG 353
A+KE+ ELG ++ + P + KI+G V + E N G L L+
Sbjct: 452 NFGAVKEVAEELGFSVAAIRY--MRPL---FLPKISGNV---FCVECNYTGLLARLIE-- 501
Query: 354 ANGKAEVKLISKIGGEVHTPMEIVDFIRR 382
A G EVK I + G TP E+ + + +
Sbjct: 502 AEG-VEVKRILRWDGRPFTPEEVREEVEK 529
>gi|11499635 2-ketoisovalerate ferredoxin oxidoreductase, subunit alpha (vorA)
[Archaeoglobus fulgidus] >gi|7449955|pir||D69506
probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC
1.2.7.-) alpha chain AF2053 [similarity] - Archaeoglobus
fulgidus >gi|2648476|gb|AAB89196.1| (AE000961)
2-ketoisovalerate ferredoxin oxidoreductase, subunit
alpha (vorA) [Archaeoglobus fulgidus]
Length = 366
Score = 116 bits (287), Expect = 5e-25
Identities = 111/387 (28%), Positives = 164/387 (41%), Gaps = 57/387 (14%)
Query: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIA 65
G + +EAIA A LA A YPITP S I E ++ + +D +++E E +
Sbjct: 12 GMKKLLTSNEAIAEAVKLAKPDVIAAYPITPQSPIVEKLSEMVDSGELDSRFVRVESEHS 71
Query: 66 SIAAIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPS 125
++ +IGA+ AGA+ TATS G + M E +A + PIV+ R S G P
Sbjct: 72 AMGVVIGAATAGARVFTATSSHGLAYMYEMCWWAAGSRLPIVMALAAR---SIGAP---- 124
Query: 126 QGDIMQSIWGTHGDH---------SLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSD 176
W HGDH I+ QEAFD T+ AF L+E+ PV + D
Sbjct: 125 --------WNIHGDHLDLMAMRDLGWIISVAENAQEAFDMTLNAFMLSEEVNIPVAVAID 176
Query: 177 AEVGHMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTG 236
M + E E+EI P+ + LP D + V FG T
Sbjct: 177 GFT--MSHTAEVVEVREVEIP----PRKQAYRILPGMDVALNAV----TFGEARMTARYD 226
Query: 237 LTHDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSA 296
L D +E+E V E L+DA+ A+V TG ++
Sbjct: 227 LAKDLENSAELIEKEYGGLV------------------ERYRLEDADYAVVVTGGLSGDV 268
Query: 297 LRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHL-VREGAN 355
A+ LRE G+K G+L++ I PF + ++ + +V + V N L V A
Sbjct: 269 KDAVDMLREEGVKMGVLRLKFIRPFPKKAVKSLPSQV--LVVDRANTDLRGTLSVEVAAC 326
Query: 356 GKAEVKLISKIGGEVHTPMEIVDFIRR 382
G V +++ IGG T E+ ++R
Sbjct: 327 GVENVNVVAGIGGRYPTVEELYSCLKR 353
>dbj|BAA95605.1| (AB042412) pyruvate:ferredoxin oxidoreductase alpha subunit
[Hydrogenobacter thermophilus]
Length = 400
Score = 110 bits (272), Expect = 3e-23
Identities = 106/385 (27%), Positives = 165/385 (42%), Gaps = 51/385 (13%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMA-LYMPLVDGVVIQMEDEIASIAAI 70
F+ G EA+ A A YPITP SE + L++ GV + E E ++ I
Sbjct: 32 FMTGSEAVKEAVKRASVDASVSYPITPQSEAAHLIGELWVEGYVGVYFRGESEFGVMSEI 91
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRG--GPSTGQPTLPSQGD 128
G + AGA+ +T TSGPG EN T P+ +V + RG P + QP
Sbjct: 92 AGCALAGARTITTTSGPGTLRAMENFPMWAGTRIPVQLVLMARGVNAPLSIQPDNLEVSF 151
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEK--YRTPVILLSDAE-VGHMRER 185
++ D ++ T Q+ FD + F +AE+ PVI + D V H RE
Sbjct: 152 LL--------DTGCMIWYAETAQDLFDMILAGFVVAEQPDVHVPVITVVDGFFVSHTRET 203
Query: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGD---PHGDFVPPMPIFGRGYRTYVTGLTHD-- 240
V +P PD+I + P N A +P D P G F+ + Y +Y T +
Sbjct: 204 VMLP-PDDIALP----PYNPYRAPMPVIDAEVPPGRFLRDPFVMKSNYISYATHASWQWE 258
Query: 241 -----ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARS 295
ER RP + +R ++E +A++ V G +
Sbjct: 259 VRAAIERSRPYA------KHYLRGLIEHFGD-------------PEADLVFVACGTASAQ 299
Query: 296 ALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN-LGQLYHLVREGA 354
A A++ L + GI A ++K+ TI PF E + + + I+VPE N +G L VR
Sbjct: 300 AKEAVRMLEDEGISARVVKLKTIRPFPIEELREATKGAKYIFVPEFNVVGWLEREVRRYL 359
Query: 355 NGKAEVKLIS--KIGGEVHTPMEIV 377
G + ++I ++ G + P E++
Sbjct: 360 YGHSSAEIIGAPRVAGGMTMPAEVI 384
>sp|P56810|PORA_METTH PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|7449945|pir||E69099 pyruvate synthase (EC
1.2.7.1) alpha chain - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622870|gb|AAB86209.1| (AE000929) pyruvate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 383
Score = 106 bits (263), Expect = 4e-22
Identities = 104/384 (27%), Positives = 168/384 (43%), Gaps = 38/384 (9%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV----IQMEDEIASIA 68
I ++A+A AA LA + YPITP + I E +A ++ DG + I++E E ++++
Sbjct: 6 ISANQAVAEAAKLAKPKVIPVYPITPQTSISEYLAKFV--ADGELKAEYIRVESEHSAMS 63
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGD 128
A +GAS AG + TATS G +LM E + A PIV+ + R + L D
Sbjct: 64 ACVGASGAGVRVFTATSSQGLALMHEIVYAAAGLRNPIVMANANRALSA----PLSIWND 119
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEK---YRTPVILLSDAEVGHMRER 185
SI D + + + QEA D + ++ ++E ++ L + H E
Sbjct: 120 QQDSI--AERDSGWMQIYVESGQEALDSVLLSYRVSEDRDVLLPSMVCLDGFILTHTVEP 177
Query: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGDPH--GDFVPPMPIFGRGYRTYVTGLTHDERG 243
V IP ++++ LP+ + + L +P G F P Y+ E+
Sbjct: 178 VDIPSQEDVDSF---LPEFQPQVMLDPDEPMSLGTFTDP--------DYYMEARYEVEKA 226
Query: 244 RPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL 303
R+ R++ ER R E R + +Y +DAE+ +V G V + I EL
Sbjct: 227 MERS--RKIIERACREFSEMFGREYGLVEEYRC---EDAEIILVAMGSVCSTLREVIDEL 281
Query: 304 RELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNL-----GQLYHLVREGANGKA 358
R+ G GLLK+ PF E I+ ++ V + N+ G LY + +
Sbjct: 282 RDKGKAVGLLKVRVHRPFPAEEIKSAVRNASKVAVLDKNITFSVGGALYTEISALLRDRE 341
Query: 359 EVKLISKIGGEVHTPMEIVDFIRR 382
I +GG TP I + +RR
Sbjct: 342 VYGFIVGLGGRDITPAHIEEIVRR 365
>pir||C70403 ferredoxin oxidoreductase alpha subunit - Aquifex aeolicus
>gi|2983644|gb|AAC07211.1| (AE000728) ferredoxin
oxidoreductase alpha subunit [Aquifex aeolicus]
Length = 404
Score = 106 bits (261), Expect = 6e-22
Identities = 108/386 (27%), Positives = 164/386 (41%), Gaps = 52/386 (13%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMA-LYMPLVDGVVIQMEDEIASIAAI 70
FI G EA+ AA A YPITP SE + L+ GV + E E ++ +
Sbjct: 35 FITGSEAVKEAAKRASVDASISYPITPQSEAAHMLGELWREGYIGVYFRGESEFGVMSEV 94
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRG--GPSTGQPTLPSQGD 128
G + AGA+ +T TSGPG E + PI +V + RG P + QP
Sbjct: 95 AGCAMAGARTITTTSGPGTMRAMEVFPMWAGSRLPIQLVLMARGINSPLSIQPDNLEISF 154
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEK--YRTPVILLSDA-EVGHMRER 185
++ D +V T QE FD I F +AE+ P+I D + H RE
Sbjct: 155 LL--------DTGCMVWHAETAQELFDMIIAGFVVAEQPDVHVPIITAIDGFFISHTREA 206
Query: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGD---PHGDFVPPMPIFGRGYRTYVTGLTHD-- 240
VY+P P++I + P N +A +P D P G F+ + Y +Y T +
Sbjct: 207 VYLP-PEDIALP----PYNPYKAPMPPIDMEMPPGRFMRDPFVMKSNYISYATHASWQFE 261
Query: 241 -----ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARS 295
ER RP + +R +VE + EV + +G A
Sbjct: 262 VRAAIERSRPYA------KHYLRGLVEHFGD-------------PEGEVLFIASGTAAAQ 302
Query: 296 ALRAIKEL-RELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN-LGQLYHLVREG 353
A A + L E GIKA +L++ T+ PF E + + + I++PE N +G L V+
Sbjct: 303 AKEATQILIHEEGIKARVLRLKTLRPFPTEEVREAVKGAKYIFIPEFNVVGWLEREVKRA 362
Query: 354 ANGKAEVKLIS--KIGGEVHTPMEIV 377
G ++ + ++GG + P E +
Sbjct: 363 LYGYTDIPIFGTPRVGGGMTMPPEFI 388
>gb|AAK42867.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-2) [Sulfolobus solfataricus]
Length = 400
Score = 104 bits (258), Expect = 1e-21
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
I G+EA+A LA YPITP + I E +A ++ ++++E E +++AA
Sbjct: 6 ISGNEAVALGVKLARVGVTGIYPITPQTTIIEKLAEMRAKGEIETEIVRVESEHSAMAAT 65
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
GA+ G +A TAT+ G M E + + + P+V+V G + G P
Sbjct: 66 FGAALGGVRAFTATASQGLLYMHEMVWWVAGSRVPVVMV---VGTRAVGAP--------- 113
Query: 131 QSIWGTHGDHS------LIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GH 181
+IW H D + I+ S QEA D T++AF ++E R P+++ D + H
Sbjct: 114 WNIWNEHTDFTSERDSGWIMAFASNPQEALDLTLQAFRISEDERVFLPMMIGMDGFILSH 173
Query: 182 MRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDP--HGDFVPPMPIFGRGYRTYVTGLTH 239
+ V IP+ D+++ LP + + DP G+ PP GY +
Sbjct: 174 TKTNVLIPDQDQVDDF---LPPRRQPYVIDPEDPVGMGNIFPP-----EGYMRLRESIDL 225
Query: 240 DERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYE----ARELDDAEVAIVTTGIVARS 295
R E VI+ I + + + DY + +L+DA+ A+V G A
Sbjct: 226 ALRN---------SEDVIKEIGREYNKKINPLGDYSTLNVSYKLEDADYAVVLMGAWAGD 276
Query: 296 ALRAIKELRELGIKAGLLKINTIWPF 321
A+ A+ LRE GIK G+L+I + P+
Sbjct: 277 AMEAVDTLREKGIKIGMLRIRYLRPW 302
>gb|AAK41454.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-1) [Sulfolobus solfataricus]
Length = 385
Score = 101 bits (249), Expect = 2e-20
Identities = 99/339 (29%), Positives = 153/339 (44%), Gaps = 45/339 (13%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVD--GVVIQMEDEIASIAAIIG 72
G+ A+A A A + A +PITP + + E ++ Y+ + +I++E E +++A+I G
Sbjct: 13 GNHAVAYAVKQAKPKVLAVFPITPQTTMLEKLSEYISSEELKAELIKVESEHSALASIYG 72
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AGA+ TATS G M E I +A PIV R + +P S
Sbjct: 73 AALAGARVFTATSSQGLLYMTEMIYWAGGQRVPIVAAVATR---AIAEP---------WS 120
Query: 133 IWGTHGDH------SLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMR 183
IW H D I + VQEA+D TI+AF ++E R PV++ D + H
Sbjct: 121 IWDDHQDFVSKRDAIWIQIMAENVQEAYDMTIQAFRISEDERVILPVMMGFDGFILTHTM 180
Query: 184 ERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDP--HGDFVPPMPIFGRGYRTYVTGLTHDE 241
ER+ + E +E V+ LP + + F DP G P Y
Sbjct: 181 ERIEVLEDNE---VDNFLPPRQFNL-IDFSDPIAIGPIATPEEYIKYRYEAM-------- 228
Query: 242 RGRPRTVEREVHERVIRRIVEKIER--NKKDIFDYEARELDDAEVAIVTTGIVARSALRA 299
+ +ER + VI I+ + ER +K E + +DA+ VT G + A
Sbjct: 229 ----KAMERA--KGVIEEIMGEYERISGRKQHGLVECYKCEDAKYVFVTMGAWSGDGKAA 282
Query: 300 IKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYV 338
+ LR+ G+K GLLKI PF E +E+ ++ + V
Sbjct: 283 VDRLRDSGVKTGLLKIRVFRPFPKEKVEEYLRSMKGVVV 321
>pir||B75047 probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain PAB1472 [similarity] - Pyrococcus abyssi
(strain Orsay) >gi|5458784|emb|CAB50271.1| (AJ248287)
KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (EC 1.-.-.-)
(VOR) [Pyrococcus abyssi]
Length = 395
Score = 101 bits (249), Expect = 2e-20
Identities = 100/336 (29%), Positives = 152/336 (44%), Gaps = 27/336 (8%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV--IQMEDEIASIAAI 70
+ G+ A A A + A + A YPITP + I E +A ++ + + I +E E +++AA
Sbjct: 11 VSGNYAAAYAVLHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHSAMAAC 70
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
IGAS GA+ TATS G +LM E + +A PIV+VDV R P D
Sbjct: 71 IGASATGARVFTATSAQGLALMHEMLHWAAGARLPIVMVDVNR----AMAPPWSVWDDQT 126
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEV-GHMRERV-YI 188
S+ + D + QE +D + AF +AE P +++ A + H E V I
Sbjct: 127 DSL--SQRDTGWMQFYAENNQEVYDGVLMAFKVAETVNVPAMVVESAFILSHTYEIVNMI 184
Query: 189 PEPDEIEIVNRKLPQNEEEAKL-PFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRP-R 246
P+ E+V+ LP + L F +P P +R Y H+E + +
Sbjct: 185 PQ----ELVDEFLPPRKPLYSLADFENPIAVGALATPADYYEFR-YKLARAHEEAKKVIK 239
Query: 247 TVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELREL 306
V RE ER R E IE+ +DDA+ + G + + A++ LR+
Sbjct: 240 DVGREFGERFGRDYSEMIEK----------AYIDDADFVFMGMGSLMGTVKEAVELLRKQ 289
Query: 307 GIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
G K G K+ PF E + +IA V+ I V + N
Sbjct: 290 GYKVGYAKVRWFRPFPREELLEIAESVKGIAVLDRN 325
>emb|CAC11767.1| (AL445064) probable 2-ketovalerate ferredoxin oxidoreductase
alpha-2 chain [Thermoplasma acidophilum]
Length = 402
Score = 98.3 bits (241), Expect = 1e-19
Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 48/374 (12%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAIIG 72
G++A+A A LA +F + YPITP + I E +A + +D +++E E +++AA+
Sbjct: 23 GNDAVAYGAKLARVKFISAYPITPQTTIVEKLASMIANDELDAKYVEVESEHSALAAVFA 82
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
+ G ++ TATS G M E + + PIV+ V R + G P +
Sbjct: 83 SELTGVRSYTATSSHGLLYMHEMLHWVAGQRLPIVMSVVNR---AIGPPW---------N 130
Query: 133 IWGTHGDHS-------LIVLSPSTVQEAFDFTIRAFNLAEK--YRTPVILLSDAEV-GHM 182
IW D + V S S QEA D I + +AE P++ + DA + H
Sbjct: 131 IWADQSDTINQRDTGWMQVYSESN-QEAMDTIIMGYKIAENSGVMLPLMSMEDAFILSHT 189
Query: 183 RERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDP--HGDFVPPMPIFGRGYRTYVTGLTHD 240
E V + + D +VN LP + + ++ +P +G + P F + + + +
Sbjct: 190 SEPVTMRDQD---LVNEYLPDLDLKFRIDPENPMGYGSYDTPDGSFMEFKKDMIDSMNN- 245
Query: 241 ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAI 300
R+V + ++ E E N + E +DDA+ AI+ G VA +A I
Sbjct: 246 --------ARKVIKEETQKFNEMFETNYGALI--ERYRMDDADYAIIAMGTVASTARFVI 295
Query: 301 KELRELGIKAGLLKINTIWPFDF-ELIE-----KIAGKVERIYVPEMNLGQLYHLVREGA 354
LRE G+ GL++I PF + E++E K AG ++R V G Y V G
Sbjct: 296 DRLRENGLNIGLIRIRYFRPFPYDEILEDLKNVKSAGVIDR-SVSFGLAGVTYSEVISGL 354
Query: 355 NGKAEVKLISKIGG 368
G+ + + S I G
Sbjct: 355 YGRINIPVSSFIVG 368
>sp|Q51801|VORA_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT) >gi|11280154|pir||T45085
2-oxoisovalerate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain vorA - Pyrococcus furiosus
>gi|1197360|emb|CAA59502.1| (X85250) 2-ketovalerate
ferredoxin oxidoreductase alpha-2 [Pyrococcus furiosus]
Length = 394
Score = 96.7 bits (237), Expect = 4e-19
Identities = 95/335 (28%), Positives = 152/335 (45%), Gaps = 25/335 (7%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV--IQMEDEIASIAAI 70
+ G+ A A AA+ A + A YPITP + I E +A ++ + + I +E E +++AA
Sbjct: 10 VSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHSAMAAC 69
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
IGAS GA+ TATS G +LM E + +A PIV+VDV R P D
Sbjct: 70 IGASATGARTFTATSAQGLALMHEMLHWAAGARLPIVMVDVNR----AMAPPWSVWDDQT 125
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEV-GHMRERV-YI 188
S+ + D + QE +D + A+ +AE P +++ A + H + V I
Sbjct: 126 DSL--SQRDTGWMQFYAENNQEVYDGVLMAYKVAETVNVPAMVVESAFILSHTYDVVEMI 183
Query: 189 PEPDEIEIVNRKLPQNEEEAKLP-FGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRT 247
P+ E+V+ LP + L F +P P +R Y H+E
Sbjct: 184 PQ----ELVDEFLPPRKPLYSLANFDEPIAVGALATPNDYYEFR-YKLAKAHEE------ 232
Query: 248 VEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELG 307
++V + V + E+ R+ + E +DDA+ + G + + A+ LR+ G
Sbjct: 233 -AKKVIKEVGKEFGERFGRDYSQMI--ETGYIDDADFVFMGMGSLMGTVKEAVDLLRKEG 289
Query: 308 IKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
K G K+ PF E + +IA V+ I V + N
Sbjct: 290 YKVGYAKVRWFRPFPKEELVEIAESVKGIAVLDRN 324
>pir||A71114 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257088|dbj|BAA29771.1| (AP000003) 397aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 397
Score = 94.8 bits (232), Expect = 2e-18
Identities = 96/336 (28%), Positives = 153/336 (44%), Gaps = 27/336 (8%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV--IQMEDEIASIAAI 70
+ G+ A A AA+ A + A YPITP + I E +A ++ + + I +E E +++AA
Sbjct: 13 VSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHSAMAAC 72
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
IGAS GA+ TATS G +LM E + +A + PIV+V+V R P D
Sbjct: 73 IGASATGARVFTATSAQGLALMHEMLHWAAGSRLPIVMVNVNR----AMAPPWSVWDDQT 128
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEV-GHMRERV-YI 188
S+ + D + QE +D + A+ +AE P +++ A + H E V I
Sbjct: 129 DSL--SQRDTGWMQFYAENNQEVYDGVLMAYKVAETVNIPTMIIESAFILSHTYEVVNMI 186
Query: 189 PEPDEIEIVNRKLPQNEEEAKL-PFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRP-R 246
P+ E+V+ LP + L F +P P +R Y H+E + +
Sbjct: 187 PQ----ELVDEFLPPRKPLYTLTDFENPIAVGALATPADYYEFR-YKIAKAHEEAKKVIK 241
Query: 247 TVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELREL 306
+V +E ER R + IE ++DA+ + G + + A+ LR+
Sbjct: 242 SVGKEFGERFGRDYSKMIETG----------YIEDADFVFMGMGSLMGTVKEAVDLLRKE 291
Query: 307 GIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
G K G K+ PF E + +IA V+ I V + N
Sbjct: 292 GYKVGYAKVRWFRPFPKEELLEIAESVKGIAVLDRN 327
>sp|O58413|VORA_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 394
Score = 94.8 bits (232), Expect = 2e-18
Identities = 96/336 (28%), Positives = 153/336 (44%), Gaps = 27/336 (8%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV--IQMEDEIASIAAI 70
+ G+ A A AA+ A + A YPITP + I E +A ++ + + I +E E +++AA
Sbjct: 10 VSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHSAMAAC 69
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
IGAS GA+ TATS G +LM E + +A + PIV+V+V R P D
Sbjct: 70 IGASATGARVFTATSAQGLALMHEMLHWAAGSRLPIVMVNVNR----AMAPPWSVWDDQT 125
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEV-GHMRERV-YI 188
S+ + D + QE +D + A+ +AE P +++ A + H E V I
Sbjct: 126 DSL--SQRDTGWMQFYAENNQEVYDGVLMAYKVAETVNIPTMIIESAFILSHTYEVVNMI 183
Query: 189 PEPDEIEIVNRKLPQNEEEAKL-PFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRP-R 246
P+ E+V+ LP + L F +P P +R Y H+E + +
Sbjct: 184 PQ----ELVDEFLPPRKPLYTLTDFENPIAVGALATPADYYEFR-YKIAKAHEEAKKVIK 238
Query: 247 TVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELREL 306
+V +E ER R + IE ++DA+ + G + + A+ LR+
Sbjct: 239 SVGKEFGERFGRDYSKMIETG----------YIEDADFVFMGMGSLMGTVKEAVDLLRKE 288
Query: 307 GIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
G K G K+ PF E + +IA V+ I V + N
Sbjct: 289 GYKVGYAKVRWFRPFPKEELLEIAESVKGIAVLDRN 324
>gb|AAF91264.1|AF230199_6 (AF230199) pyruvate oxidoreductase alpha subunit [Methanococcus
maripaludis]
Length = 387
Score = 94.4 bits (231), Expect = 2e-18
Identities = 103/383 (26%), Positives = 159/383 (40%), Gaps = 42/383 (10%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
I G A A AA LA A YPITP + E +A ++ ++ I++E E ++++A
Sbjct: 7 ITGTSAAAEAAKLADVDVIAAYPITPQTTCVEKLADFVANGELNAEYIKVESEHSAMSAS 66
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
IGAS AGA+A TATS G +LM E + A P+V+++ R + Q +
Sbjct: 67 IGASAAGARAFTATSSQGLALMHEVLFAAAGMRVPVVMMNANRALSAPINIWNDQQDSLS 126
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLA--EKYRTPVILLSDAEV-GHMRERVY 187
Q D I L QE D I+AF +A EK PV++ D + H E V
Sbjct: 127 QR------DTGWIQLYAEDNQEVLDLVIQAFKIAEDEKVLLPVMVNLDGFILTHTVEPVT 180
Query: 188 IPEPDEI-------EIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
+P+ + + E + L + + GDP+ Y
Sbjct: 181 LPKQENVLDFIGTYEPKHAYLDPKKPMTQGALGDPN-------------YYMETRYAIET 227
Query: 241 ERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAI 300
+ V +VH+ EK R + E+ L+ AE IV G + + I
Sbjct: 228 AMENAKKVIADVHD----AFAEKFNRAYGNGL-IESYNLEKAENVIVAMGSICGTIKDMI 282
Query: 301 KELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE------MNLGQLYHLVREGA 354
++ G++ GLLKI P E+I+ + + + + MN G +Y V
Sbjct: 283 DLKKKEGVEIGLLKIRCYRPLPIEMIKDALKNAKNVAILDKSISLGMNKGAIYADVASHL 342
Query: 355 NGKAEVKLISKIGGEVHTPMEIV 377
K V I +GG TP +I+
Sbjct: 343 KDKKTVNYIVGLGGRDITPEDIL 365
>emb|CAA59457.1| (X85171) alpha subunit of pyruvate ferredoxin oxidoreductase
[Thermotoga maritima]
>gi|4980501|gb|AAD35111.1|AE001690_5 (AE001690) pyruvate
ferredoxin oxidoreductase, alpha subunit [Thermotoga
maritima]
Length = 394
Score = 93.2 bits (228), Expect = 4e-18
Identities = 103/328 (31%), Positives = 146/328 (44%), Gaps = 36/328 (10%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV----IQMEDEIASIA 68
+ G EA+A A A YPITP + I E A ++ DGVV I +E E ++++
Sbjct: 12 VTGAEAVANAMRQIEPDVVAAYPITPQTPIVEYFARFV--ADGVVRTEMIPVESEHSAMS 69
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQR--GGPSTGQPTLPSQ 126
A++GA+ AGA+AMTATS G +LM E + A PIV+ V R GP
Sbjct: 70 AVVGAAAAGARAMTATSANGLALMHEIVYIAASYRLPIVMPVVNRALSGPIN---IHCDH 126
Query: 127 GDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLA--EKYRTPVILLSDAEV-GHMR 183
D M D I L T QEA+DFTI A LA E R PV++ D + H
Sbjct: 127 SDAM-----AERDSGWIQLFAETNQEAYDFTILAVRLAEHEDVRLPVMVNLDGFILSHGV 181
Query: 184 ERVYIPEPDEIEIVNRKLPQNEEEAKLPFGD-PHGDFVPPMPIFGRGYRTYVTGLTHDER 242
E V PDE+ K E + P D H P+ ++ + E
Sbjct: 182 EPVEF-YPDELV----KKFVGELKPMYPLLDTEHPVTWGPLDLYDYYF----------EH 226
Query: 243 GRPRTVEREVHERVIRRIVEKIERN-KKDIFDYEARELDDAEVAIVTTGIVARSALRAIK 301
R + E ++V I ++ E + + E ++DAE +V G + +
Sbjct: 227 KRQQIEAMENVKKVFPEIAKEFEETFGRKYWFVEPYRMEDAEHVMVALGSTNSTIKYVVD 286
Query: 302 ELRELGIKAGLLKINTIWPFDFELIEKI 329
ELRE G K G LKI PF E ++++
Sbjct: 287 ELREEGYKVGSLKIWMFRPFPKEQLQEL 314
>sp|O05651|PORA_THEMA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|7449946|pir||C72427 pyruvate synthase (EC
1.2.7.1) alpha chain - Thermotoga maritima (strain MSB8)
Length = 392
Score = 93.2 bits (228), Expect = 4e-18
Identities = 103/328 (31%), Positives = 146/328 (44%), Gaps = 36/328 (10%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV----IQMEDEIASIA 68
+ G EA+A A A YPITP + I E A ++ DGVV I +E E ++++
Sbjct: 10 VTGAEAVANAMRQIEPDVVAAYPITPQTPIVEYFARFV--ADGVVRTEMIPVESEHSAMS 67
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQR--GGPSTGQPTLPSQ 126
A++GA+ AGA+AMTATS G +LM E + A PIV+ V R GP
Sbjct: 68 AVVGAAAAGARAMTATSANGLALMHEIVYIAASYRLPIVMPVVNRALSGPIN---IHCDH 124
Query: 127 GDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLA--EKYRTPVILLSDAEV-GHMR 183
D M D I L T QEA+DFTI A LA E R PV++ D + H
Sbjct: 125 SDAM-----AERDSGWIQLFAETNQEAYDFTILAVRLAEHEDVRLPVMVNLDGFILSHGV 179
Query: 184 ERVYIPEPDEIEIVNRKLPQNEEEAKLPFGD-PHGDFVPPMPIFGRGYRTYVTGLTHDER 242
E V PDE+ K E + P D H P+ ++ + E
Sbjct: 180 EPVEF-YPDELV----KKFVGELKPMYPLLDTEHPVTWGPLDLYDYYF----------EH 224
Query: 243 GRPRTVEREVHERVIRRIVEKIERN-KKDIFDYEARELDDAEVAIVTTGIVARSALRAIK 301
R + E ++V I ++ E + + E ++DAE +V G + +
Sbjct: 225 KRQQIEAMENVKKVFPEIAKEFEETFGRKYWFVEPYRMEDAEHVMVALGSTNSTIKYVVD 284
Query: 302 ELRELGIKAGLLKINTIWPFDFELIEKI 329
ELRE G K G LKI PF E ++++
Sbjct: 285 ELREEGYKVGSLKIWMFRPFPKEQLQEL 312
>pir||E71114 probable ferredoxin oxidoreductase alpha-2 subunit - Pyrococcus
horikoshii >gi|3257092|dbj|BAA29775.1| (AP000003) 398aa
long hypothetical ferredoxin oxidoreductase alpha-2
subunit [Pyrococcus horikoshii]
Length = 398
Score = 93.2 bits (228), Expect = 4e-18
Identities = 97/327 (29%), Positives = 147/327 (44%), Gaps = 24/327 (7%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
++ +EA A AA LA + A +PITP++ + E ++ ++ +D I++E E ++I+A+
Sbjct: 10 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAV 69
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
+GAS AG + TAT+ G +LM E + A PIV+ G S P + D
Sbjct: 70 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMA---IGNRSLSAP-INIWNDWQ 125
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMRERVY 187
SI + D I QEA D + A+ +AE R P ++ DA + H E V
Sbjct: 126 DSI--SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 183
Query: 188 IPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRT 247
IP+ E+V+ L E E K + DP F Y L D + R
Sbjct: 184 IPDQ---EVVDEFL--GEYEPKHAYLDPKRPITQGTLAFPAHYME-AKYLVWDAMEKARK 237
Query: 248 VEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELG 307
V E +R K ++ E + DDAE+ VT G +A + + + RE G
Sbjct: 238 VIDEAFAEFEKRFGRKYQK-------IEEYKTDDAEIIFVTMGSLAGTLKDWVDKKREEG 290
Query: 308 IKAGLLKINTIWPFDFELIEKIAGKVE 334
K G K+ PF E I +A K +
Sbjct: 291 YKVGAAKMTVYRPFPVEEIRALAKKAK 317
>sp|O73986|PORA_PYRHO PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT)
Length = 395
Score = 93.2 bits (228), Expect = 4e-18
Identities = 97/327 (29%), Positives = 147/327 (44%), Gaps = 24/327 (7%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
++ +EA A AA LA + A +PITP++ + E ++ ++ +D I++E E ++I+A+
Sbjct: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAV 66
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
+GAS AG + TAT+ G +LM E + A PIV+ G S P + D
Sbjct: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMA---IGNRSLSAP-INIWNDWQ 122
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMRERVY 187
SI + D I QEA D + A+ +AE R P ++ DA + H E V
Sbjct: 123 DSI--SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 188 IPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRT 247
IP+ E+V+ L E E K + DP F Y L D + R
Sbjct: 181 IPDQ---EVVDEFL--GEYEPKHAYLDPKRPITQGTLAFPAHYME-AKYLVWDAMEKARK 234
Query: 248 VEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELG 307
V E +R K ++ E + DDAE+ VT G +A + + + RE G
Sbjct: 235 VIDEAFAEFEKRFGRKYQK-------IEEYKTDDAEIIFVTMGSLAGTLKDWVDKKREEG 287
Query: 308 IKAGLLKINTIWPFDFELIEKIAGKVE 334
K G K+ PF E I +A K +
Sbjct: 288 YKVGAAKMTVYRPFPVEEIRALAKKAK 314
>pir||F64658 pyruvate synthase (EC 1.2.7.1) alpha chain - Helicobacter pylori
(strain 26695) >gi|2314261|gb|AAD08154.1| (AE000617)
pyruvate ferredoxin oxidoreductase, alpha subunit
[Helicobacter pylori 26695]
Length = 407
Score = 92.4 bits (226), Expect = 8e-18
Identities = 92/331 (27%), Positives = 149/331 (44%), Gaps = 56/331 (16%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP--LVDGVVIQMEDEIASIAAIIG 72
G+ A + A A A YPITP++ I + + VDG + +E E A+++A +G
Sbjct: 15 GNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYVDGEFVLVESEHAAMSACVG 74
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AG + TATS G +LM E + A PIV+ V R + +
Sbjct: 75 AAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRA---------------LAA 119
Query: 133 IWGTHGDHSLIVLSPST---------VQEAFDFTIRAFNLAE--KYRTPVILLSDAEV-G 180
HGDHS + LS + QEA+DFT+ AF +AE K R P I+ D +
Sbjct: 120 PLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCS 179
Query: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
H + V P + + + + + + L DF P+ Y H
Sbjct: 180 HTVQNV---RPLSDAVAYQFVGEYQTKHSLL------DFDKPV-----SYGAQAEEEWHY 225
Query: 241 ERGRPRTVEREVHERVI--RRIVEKIERNKKDIFDYEAR-----ELDDAEVAIVTTGIVA 293
E + ++H ++ ++E++ + + + +L+DAE+AI G
Sbjct: 226 EH------KAQLHHAIMSASSVIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTY 279
Query: 294 RSALRAIKELRELGIKAGLLKINTIWPFDFE 324
SA+ A KE+R+ GIKAG+ I+++ PF +E
Sbjct: 280 ESAIVAAKEMRKKGIKAGVATIHSLRPFPYE 310
>pir||H71857 pyruvate ferrodoxin oxidoreductase - Helicobacter pylori (strain
J99) >gi|4155626|gb|AAD06616.1| (AE001531) Pyruvate
ferrodoxin oxidoreductase [Helicobacter pylori J99]
Length = 407
Score = 92.4 bits (226), Expect = 8e-18
Identities = 92/331 (27%), Positives = 149/331 (44%), Gaps = 56/331 (16%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP--LVDGVVIQMEDEIASIAAIIG 72
G+ A + A A A YPITP++ I + + VDG + +E E A+++A +G
Sbjct: 15 GNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYVDGEFVLVESEHAAMSACVG 74
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AG + TATS G +LM E + A PIV+ V R + +
Sbjct: 75 AAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRA---------------LAA 119
Query: 133 IWGTHGDHSLIVLSPST---------VQEAFDFTIRAFNLAE--KYRTPVILLSDAEV-G 180
HGDHS + LS + QEA+DFT+ AF +AE K R P I+ D +
Sbjct: 120 PLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCS 179
Query: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
H + V P + + + + + + L DF P+ Y H
Sbjct: 180 HTVQNV---RPLSDAVAYQFVGEYQTKHSLL------DFDKPV-----SYGAQAEEEWHY 225
Query: 241 ERGRPRTVEREVHERVI--RRIVEKIERNKKDIFDYEAR-----ELDDAEVAIVTTGIVA 293
E + ++H ++ ++E++ + + + +L+DAE+AI G
Sbjct: 226 EH------KAQLHHAIMSASSVIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTY 279
Query: 294 RSALRAIKELRELGIKAGLLKINTIWPFDFE 324
SA+ A KE+R+ GIKAG+ I+++ PF +E
Sbjct: 280 ESAIVAAKEMRKKGIKAGVATIHSLRPFPYE 310
>gb|AAC02293.1| (AF013980) pyruvate:ferredoxin oxidoreductase alpha subunit
[Helicobacter pylori]
Length = 396
Score = 92.1 bits (225), Expect = 1e-17
Identities = 91/331 (27%), Positives = 149/331 (44%), Gaps = 56/331 (16%)
Query: 15 GDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP--LVDGVVIQMEDEIASIAAIIG 72
G+ A + A A A YPITP++ I + + +DG + +E E A+++A +G
Sbjct: 15 GNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVG 74
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ AG + TATS G +LM E + A PIV+ V R + +
Sbjct: 75 AAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRA---------------LAA 119
Query: 133 IWGTHGDHSLIVLSPST---------VQEAFDFTIRAFNLAE--KYRTPVILLSDAEV-G 180
HGDHS + LS + QEA+DFT+ AF +AE K R P I+ D +
Sbjct: 120 PLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFKIAEHQKVRVPTIVNQDGFLCS 179
Query: 181 HMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHD 240
H + V P + + + + + + L DF P+ Y H
Sbjct: 180 HTVQNV---RPLSDAVAYQFVGEYQTKHSLL------DFDKPV-----SYGAQAEEEWHY 225
Query: 241 ERGRPRTVEREVHERVI--RRIVEKIERNKKDIFDYEAR-----ELDDAEVAIVTTGIVA 293
E + ++H ++ ++E++ + + + +L+DAE+AI G
Sbjct: 226 EH------KAQLHHAIMSASSVIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTY 279
Query: 294 RSALRAIKELRELGIKAGLLKINTIWPFDFE 324
SA+ A KE+R+ GIKAG+ I+++ PF +E
Sbjct: 280 ESAIVAAKEMRKKGIKAGVATIHSLRPFPYE 310
>pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-1)
PAB0855 - Pyrococcus abyssi (strain Orsay)
>gi|5458715|emb|CAB50202.1| (AJ248287) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-1)
[Pyrococcus abyssi]
Length = 648
Score = 92.1 bits (225), Expect = 1e-17
Identities = 91/336 (27%), Positives = 143/336 (42%), Gaps = 45/336 (13%)
Query: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASI 67
G+ + G++AI R A+ YA YP TP+SEI + MA + +E +
Sbjct: 14 GERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAF 73
Query: 68 AAIIGASWAGAKAMTATSGPGFSLMQEN---IGYAVMTETPIVVVDVQRGGPSTGQPTLP 124
+ ASWAG +AMTA G ++ ++ + Y + +VVV P++
Sbjct: 74 ETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVV--------ADDPSMW 125
Query: 125 SQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRE 184
S + Q ++ VL PS+VQEA D AF ++EKY VIL + HMR
Sbjct: 126 SSQN-EQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG 184
Query: 185 RVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGR 244
V + E LPQ +E K FGD F + YV
Sbjct: 185 DVVLGE----------LPQEIKEGKRKFGD-----------FKKNPERYVD--------- 214
Query: 245 PRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELR 304
+R H+ ++ I + E F++ +DA+V I+ G+ A+ L
Sbjct: 215 IPAFQRPKHKWLLETIEKFREEFNNSPFNW-IEGPEDAKVGIIAPGLSYAYVKEALAWLG 273
Query: 305 ELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
+K +LK+ T +P + L+EK +ER+ + E
Sbjct: 274 VDNVK--VLKLGTPFPVPYGLLEKFFQGLERVLIVE 307
>sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450338|pir||F71124 probable indolepyruvate
ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257173|dbj|BAA29856.1| (AP000003) 648aa
long hypothetical indolepyruvate ferredoxin
oxidoreductase alpha subunit [Pyrococcus horikoshii]
Length = 648
Score = 91.3 bits (223), Expect = 2e-17
Identities = 94/338 (27%), Positives = 146/338 (42%), Gaps = 49/338 (14%)
Query: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASI 67
G+ + G++AI R A+ YA YP TP+SEI + MA+ + +E +
Sbjct: 14 GEKVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAMVAKKAGVYMEYSTNEKVAF 73
Query: 68 AAIIGASWAGAKAMTATSGPGFSLMQEN---IGYAVMTETPIVVVDVQRGGPSTGQPTLP 124
+ ASWAG +AMTA G ++ ++ + Y + IVVV P++
Sbjct: 74 ETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGINGGLIVVV--------ADDPSMW 125
Query: 125 SQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRE 184
S + Q ++ VL PS+VQEA D AF ++EKY VIL + HMR
Sbjct: 126 SSQN-EQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG 184
Query: 185 RVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGR 244
V + E LPQ +E K FG+ F + YV
Sbjct: 185 DVVLGE----------LPQEIKEGKRKFGN-----------FKKNPEKYVD--------- 214
Query: 245 PRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKE-L 303
+R H ++ I + E F++ +DA+V I+ G+ + +KE L
Sbjct: 215 IPAFQRPKHPWLLETIEKFREEFNTSPFNW-IEGPEDAKVGIIAPGL----SYAYVKEAL 269
Query: 304 RELGI-KAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
LGI +LK+ T +P + L+EK +ER+ + E
Sbjct: 270 AWLGIDNVKILKLGTPFPVPYGLLEKFFNGLERVLIVE 307
>gi|11499291 pyruvate ferredoxin oxidoreductase, subunit alpha (porA)
[Archaeoglobus fulgidus] >gi|7449947|pir||D69462
pyruvate synthase (EC 1.2.7.1) alpha chain -
Archaeoglobus fulgidus >gi|2648853|gb|AAB89548.1|
(AE000986) pyruvate ferredoxin oxidoreductase, subunit
alpha (porA) [Archaeoglobus fulgidus]
Length = 391
Score = 90.1 bits (220), Expect = 4e-17
Identities = 103/381 (27%), Positives = 156/381 (40%), Gaps = 51/381 (13%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP---LVDGVVIQMEDEIASIAA 69
++G ++A + L YPITP +EI E +A L D I E E + +
Sbjct: 5 VRGFYSVAYSVKLCKPNVICAYPITPQTEIVENLAAMYANGELGDAEYITAESEFGAASM 64
Query: 70 IIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDI 129
++GAS AGA+ TAT G LM E + A PIV+V+ R + P
Sbjct: 65 LVGASAAGARVFTATCSQGLILMSEVLFNAAGMRLPIVLVNTNR---ALSAPL------- 114
Query: 130 MQSIWGTHGDH------SLIVLSPSTVQEAFDFTIRAFNLAE--KYRTPVILLSDAEVGH 181
SIW H D ++ + QEA D +A+ +AE K P ++ D G+
Sbjct: 115 --SIWNDHQDSMAMRDAGIMQVYVENNQEAHDMIPQAYKVAENRKVLLPFMICMD---GY 169
Query: 182 MRERVYIP-EPDEIEIVNRKLPQNEEEAKLPFGDP--HGDFVPPMPIFGRGYRTYVTGLT 238
Y P + E E V+ LP E A + P G + PP Y + +
Sbjct: 170 KLTHAYEPVDLLEQETVDSFLPPYEPAAYMTTKKPLAFGCYAPP-----HVYMEFRVAM- 223
Query: 239 HDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALR 298
R R + +V + E E +D + + D+++ +V G V +
Sbjct: 224 QQAMERARKIMLDVFK-------EWGELTGRDWGGHITVDFPDSKIFVVAMGSVVGLLRK 276
Query: 299 AIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKA 358
++ELR G+ GL+KI T PF E + + E++ V L V G G
Sbjct: 277 VVEELRGEGLSVGLIKIRTFRPFPVEELREALKDAEKVIV-------LDRSVSFGYEGPV 329
Query: 359 EVKLISKIGGEVHTPMEIVDF 379
++L S I G H+ EI F
Sbjct: 330 SIELKSAIYG--HSSAEIYSF 348
>pir||G75046 pyruvate synthase (EC 1.2.7.1) alpha chain PAB1475 - Pyrococcus
abyssi (strain Orsay) >gi|5458781|emb|CAB50268.1|
(AJ248287) PYRUVATE SYNTHASE SUBUNIT PORA (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE ALPHA CHAIN) (POR) [Pyrococcus
abyssi]
Length = 395
Score = 89.3 bits (218), Expect = 7e-17
Identities = 94/331 (28%), Positives = 148/331 (44%), Gaps = 32/331 (9%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
++ +EA A AA LA + A +PITP++ + E ++ ++ +D I++E E ++I+A+
Sbjct: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
+GAS AG + TAT+ G +LM E + A PIV+ + G L + +I
Sbjct: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVM--------AIGNRALSAPINIW 118
Query: 131 QSIWGT--HGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMRER 185
T D I QEA D + A+ +AE R P ++ DA + H E
Sbjct: 119 NDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEP 178
Query: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGY--RTYVTGLTHDERG 243
V IP+ E+V+ L E E K + DP F Y Y+ +
Sbjct: 179 VEIPDQ---EVVDEFL--GEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMEN-- 231
Query: 244 RPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL 303
R+V + +K R + I +Y DDAE+ VT G +A + + +
Sbjct: 232 -----ARKVIDEAFAEFEKKFGRKYQKIEEYRT---DDAEIIFVTMGSLAGTLKDWVDKK 283
Query: 304 RELGIKAGLLKINTIWPFDFELIEKIAGKVE 334
RE G K G K+ PF E I ++A K +
Sbjct: 284 REEGYKVGAAKMTVYRPFPVEEIRELAKKTK 314
>sp|Q51804|PORA_PYRFU PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|11280155|pir||T45088 pyruvate synthase (EC
1.2.7.1) alpha-2 chain [imported] - Pyrococcus furiosus
>gi|1197363|emb|CAA59505.1| (X85250) pyruvate ferredoxin
oxidoreductase alpha-2 [Pyrococcus furiosus]
Length = 396
Score = 87.4 bits (213), Expect = 3e-16
Identities = 96/339 (28%), Positives = 153/339 (44%), Gaps = 30/339 (8%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
++ +EA A AA LA + A +PITP++ I E ++ ++ +D I++E E ++I+A
Sbjct: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISAC 66
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
+GA+ AG + TAT+ G +LM E + A PIV+ + G L + +I
Sbjct: 67 VGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVM--------AIGNRALSAPINIW 118
Query: 131 QSIWGT--HGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMRER 185
T D + QEA D + A+ +AE R P ++ DA + H E
Sbjct: 119 NDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEP 178
Query: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGY-RTYVTGLTHDERGR 244
V IP+ E+V+ L E E K + DP F Y + T ER
Sbjct: 179 VEIPDQ---EVVDEFL--GEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERA- 232
Query: 245 PRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELR 304
++V + +K R + I +Y+ +DA++ VT G +A + I + R
Sbjct: 233 -----KKVIDEAFAEFEKKFGRKYQKIEEYKT---EDADIIFVTMGSLAGTLNEWIDKKR 284
Query: 305 ELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNL 343
E G K G KI PF E I ++A K + + E N+
Sbjct: 285 EEGYKVGAAKITVYRPFPVEEIRELAKKAKVLAFLEKNI 323
>pir||B70400 ferredoxin oxidoreductase alpha subunit - Aquifex aeolicus
>gi|2983615|gb|AAC07184.1| (AE000726) ferredoxin
oxidoreductase alpha subunit [Aquifex aeolicus]
Length = 389
Score = 85.8 bits (209), Expect = 8e-16
Identities = 100/390 (25%), Positives = 152/390 (38%), Gaps = 64/390 (16%)
Query: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMA-LYMPLVDGVVIQMEDEIASIAAI 70
FI G +A A A A YPITP SE + LY + E+E +++AI
Sbjct: 22 FITGSQAFAEAVKRANVDVAIAYPITPQSETMHLVGDLYAQGYVKDYYRAEEEYGAMSAI 81
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQR--GGPSTGQPTLPSQGD 128
GA GA+A TATSGPG E I P V+ + R P + QP
Sbjct: 82 AGAVRGGARAFTATSGPGLLRGLEAIVSWPGHRIPAVLGVMTRVVNAPLSIQPDNVEISY 141
Query: 129 IMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEK---YRTPVILLSDAEVGHMRER 185
++ S L+VL Q+ FDFT+ F ++EK Y V+ V H +
Sbjct: 142 LLNS--------GLVVLHAENQQDVFDFTLAGFVISEKVDVYLPVVVATEGFFVTHAKGY 193
Query: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPP-------------MPIFGRGYRT 232
V +P E+ KLP DP+ VPP P+ + +
Sbjct: 194 VELP---------------PEDMKLPPRDPYKAPVPPTDCEIPPARIQRDAPVQKSNFMS 238
Query: 233 YVTGLTHDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELD----DAEVAIVT 288
Y+ +H + + R K I Y ++ DAEV +V
Sbjct: 239 YL-----------------IHAVWQQEVWSANRRAAKWIKHYLGGLIEVVNPDAEVFVVA 281
Query: 289 TGIVARSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNL-GQLY 347
+G A A + G+ GL+K+ ++ PF + I + + + VPE N+ G L
Sbjct: 282 SGCAAAQGREAQRYATMEGLNVGLIKVKSLRPFPVDEIREALKNAKAVIVPEHNIVGWLA 341
Query: 348 HLVREGANGKAEVKLISKIGGEVHTPMEIV 377
V+ V ++ G + P+E++
Sbjct: 342 KEVKAAIPNSGIVVDGPRVYGGMTLPVELI 371
>gb|AAK42308.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-like) [Sulfolobus solfataricus]
Length = 415
Score = 83.1 bits (202), Expect = 5e-15
Identities = 96/398 (24%), Positives = 149/398 (37%), Gaps = 49/398 (12%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP--LVDGVVIQMEDEIASIAAI 70
+ G +A+A AA+ A A YPI P +E+ + ++ + +D I E E +
Sbjct: 14 MNGTQAVAHAAMYADVDVVAAYPIRPYTEVMDTISKLIADGELDAEFIVAEGEHGQFETV 73
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
AS AGA+ + +SG G+ E I P+V + R G + +M
Sbjct: 74 KHASLAGARTLVGSSGVGWLYAMEAIVVTATDRAPVVAIIGNRALDDPGAYGVEHNDALM 133
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPE 190
D +++ T QEAFD + A+ +AE R + L + G + I
Sbjct: 134 VR------DVGWLLVWVDTAQEAFDTALLAYRIAEDQRVLLPLGISMDGGFLTHSEQIVR 187
Query: 191 PDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVER 250
E+V LP P+ P PI T + D R
Sbjct: 188 LPPRELVKNFLP--------PYNRGKYLVHPDNPI------TVAPQVNEDWVMEIRRQHE 233
Query: 251 EVHERVIRRIVEKIERNKKDIFDY---------------EARELDDAEVAIVTTGIVARS 295
E ER IVE E KK Y E +DDAEV ++ G V++
Sbjct: 234 EAMERARSVIVEAYEEFKKVFGRYPGSTSDLQMPENPFVEPYMIDDAEVVLIGMGTVSKP 293
Query: 296 ALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNL--------GQLY 347
AIK +R G K G+L+I PF + + + + V + + G +Y
Sbjct: 294 MKVAIKNMRRQGYKVGMLRIRWFRPFPTQDVIRYLANSRVVCVIDRDYSMGSPNRGGVIY 353
Query: 348 HLVREGANGKAE----VKLISKIGGEVHTPMEIVDFIR 381
H VR + + I +GG T ++ I+
Sbjct: 354 HEVRSSLYDLDQRPRVMNFIGGLGGREITIQDVEKIIK 391
>pir||S74041 pyruvate synthase (EC 1.2.7.1) alpha chain - Sulfolobus
solfataricus >gi|1707735|emb|CAA69455.1| (Y08256)
pyruvate-ferredoxin oxidoreductase alpha-2 [Sulfolobus
solfataricus]
Length = 415
Score = 83.1 bits (202), Expect = 5e-15
Identities = 96/398 (24%), Positives = 149/398 (37%), Gaps = 49/398 (12%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP--LVDGVVIQMEDEIASIAAI 70
+ G +A+A AA+ A A YPI P +E+ + ++ + +D I E E +
Sbjct: 14 MNGTQAVAHAAMYADVDVVAAYPIRPYTEVMDTISKLIADGELDAEFIVAEGEHGQFETV 73
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
AS AGA+ + +SG G+ E I P+V + R G + +M
Sbjct: 74 KHASLAGARTLVGSSGVGWLYAMEAIVVTATDRAPVVAIIGNRALDDPGAYGVEHNDALM 133
Query: 131 QSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPE 190
D +++ T QEAFD + A+ +AE R + L + G + I
Sbjct: 134 VR------DVGWLLVWVDTAQEAFDTALLAYRIAEDQRVLLPLGISMDGGFLTHSEQIVR 187
Query: 191 PDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVER 250
E+V LP P+ P PI T + D R
Sbjct: 188 LPPRELVKNFLP--------PYNRGKYLVHPDNPI------TVAPQVNEDWVMEIRRQHE 233
Query: 251 EVHERVIRRIVEKIERNKKDIFDY---------------EARELDDAEVAIVTTGIVARS 295
E ER IVE E KK Y E +DDAEV ++ G V++
Sbjct: 234 EAMERARSVIVEAYEEFKKVFGRYPGSTSDLQMPENPFVEPYMIDDAEVVLIGMGTVSKP 293
Query: 296 ALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMNL--------GQLY 347
AIK +R G K G+L+I PF + + + + V + + G +Y
Sbjct: 294 MKVAIKNMRRQGYKVGMLRIRWFRPFPTQDVIRYLANSRVVCVIDRDYSMGSPNRGGVIY 353
Query: 348 HLVREGANGKAE----VKLISKIGGEVHTPMEIVDFIR 381
H VR + + I +GG T ++ I+
Sbjct: 354 HEVRSSLYDLDQRPRVMNFIGGLGGREITIQDVEKIIK 391
>gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA)
[Sulfolobus solfataricus]
Length = 612
Score = 81.1 bits (197), Expect = 2e-14
Identities = 88/328 (26%), Positives = 134/328 (40%), Gaps = 52/328 (15%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
I G+EAIA A+ AG AGYP TP++EI E + + + +E + G
Sbjct: 11 ILGNEAIAFGALSAGVSVAAGYPGTPSTEIIETLMKFGKIY---AEWSTNEKVAFETAYG 67
Query: 73 ASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQS 132
A+ GA A+T G ++ + + + T +V V PS SQ +
Sbjct: 68 AAINGAFALTTMKHVGLNVAADPLISSSYTGVEGALVIVSADDPSMWS----SQNEQDNR 123
Query: 133 IWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEPD 192
+G H + V+ P Q A D TI AF L+ K + PVI S +GH+R V + P
Sbjct: 124 YYGLHA--LIPVVEPYDPQSAHDLTIEAFKLSNKVKHPVIFRSTTRIGHIRGPVELKPPS 181
Query: 193 EIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVEREV 252
P M + + YV + R R ++R
Sbjct: 182 R---------------------------PVMGKVIKNPKRYVLVPENARRDRVEQLKR-- 212
Query: 253 HERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAGL 312
RI E++E ++ D +D+E I+ +GI + AIKEL IKA +
Sbjct: 213 ----WERIEEEVE-GLNELID------NDSENLIIASGISFGYVIDAIKELE---IKANI 258
Query: 313 LKINTIWPFDFELIEKIAGKVERIYVPE 340
L++ T P LI K +R+ + E
Sbjct: 259 LRLTTPVPIPKRLILKAVSNSKRVLIVE 286
>gb|AAD28766.1| (AF132216) 2-oxoisovalerate oxidoreductase beta subunit
[Prevotella albensis]
Length = 104
Score = 80.8 bits (196), Expect = 3e-14
Identities = 43/88 (48%), Positives = 56/88 (62%), Gaps = 2/88 (2%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMP--LVDGVVIQMEDEIASIAAI 70
++G+EAIA AAI G + GYPITP SEI E +AL P VV+Q E E+ASI +
Sbjct: 8 MKGNEAIAHAAIRCGADGFFGYPITPQSEIIETLALLKPWETTGMVVLQAESEVASINML 67
Query: 71 IGASWAGAKAMTATSGPGFSLMQENIGY 98
G + AG + +T +S PG +LMQE I Y
Sbjct: 68 YGGAGAGKRVLTTSSSPGVALMQEGIAY 95
>emb|CAC12141.1| (AL445066) indolepyruvate ferredoxin oxidoreductase, alpha subunit
related protein [Thermoplasma acidophilum]
Length = 605
Score = 80.4 bits (195), Expect = 3e-14
Identities = 88/343 (25%), Positives = 139/343 (39%), Gaps = 69/343 (20%)
Query: 9 KADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIA 68
KA F+ G+EAIA AA+ AG AGYP TP++EI E + + P D V +E +
Sbjct: 4 KAKFMIGNEAIAAAAVHAGVSVAAGYPGTPSTEIIENVRKFGP--DVYVEWSVNEKIAFE 61
Query: 69 AIIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGD 128
GA+ +G + A G ++ + + + T TG + S D
Sbjct: 62 TAYGAAMSGGTGLVAVKHVGLNVASDPMFSSSYTGI-------------TGSLVIVSADD 108
Query: 129 IMQSIWGT--------HGDHSLI-VLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEV 179
S+W + +G H+LI VL P VQ A+D T++AF ++ + PVIL + +
Sbjct: 109 --SSMWSSQNEQDNRFYGLHALIPVLEPYDVQSAYDLTLKAFEVSRLFHHPVILRTTTRI 166
Query: 180 GHMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTH 239
GH+R V + E P + K P TYV +
Sbjct: 167 GHVRSNVIYEDHHE--------PLRGKVIKDP-------------------NTYVLAPEN 199
Query: 240 DERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRA 299
R + +ER +I + YE D +I+ TG ++ S L+
Sbjct: 200 ARSDRKKQLER----------WREISDYLSSLCSYE----PDGGDSIIITGGISYSYLK- 244
Query: 300 IKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPEMN 342
+ L + GI +L+++ P I + R+ V E N
Sbjct: 245 -EALEDAGIHTNVLRLDATVPIPESAILNHINGIRRVLVVEEN 286
>gi|11499084 indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA)
[Archaeoglobus fulgidus]
>gi|6685558|sp|O28783|IORA_ARCFU INDOLEPYRUVATE
OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450334|pir||H69435 indolepyruvate ferredoxin
oxidoreductase, subunit alpha (iorA) homolog -
Archaeoglobus fulgidus >gi|2649079|gb|AAB89760.1|
(AE001000) indolepyruvate ferredoxin oxidoreductase,
subunit alpha (iorA) [Archaeoglobus fulgidus]
Length = 623
Score = 79.6 bits (193), Expect = 6e-14
Identities = 91/347 (26%), Positives = 153/347 (43%), Gaps = 69/347 (19%)
Query: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVV-IQME---DE 63
G+ F+ G+EAIAR AI AG +A YP TP+SEI + ++ L+ G + ME +E
Sbjct: 11 GEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKMDFYMEYSANE 70
Query: 64 IASIAAIIGASWAGAKAMTATSGPGFSLMQENI-GYAVMTETPIVVVDVQRGG---PSTG 119
+ +GAS AG +AM G ++ + + +A + RGG +
Sbjct: 71 KVAFEVAVGASLAGKRAMATMKHVGVNVAADPLFSFAYVG---------ARGGFVLVTAD 121
Query: 120 QPTLPSQGDIMQSIWGTHGDHS-LIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAE 178
P++ S + + W +G + L V+ PS+VQEA D+ F+L+EK+ P+IL S
Sbjct: 122 DPSMHSSQNEQDNRW--YGKAAKLPVVEPSSVQEAKDYAKLCFDLSEKFGLPMILRSYTR 179
Query: 179 VGHMRERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLT 238
+ H V + K+P+ E P D V P
Sbjct: 180 LSHASGVVEL----------GKIPEKEFSRVEWERHPETDVVLP---------------A 214
Query: 239 HDERGRPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELD-----DAEVAIVTTGIVA 293
H + +P +E+ +EKIER + + E++ D +V I+ G+
Sbjct: 215 HARKLKPILLEK----------LEKIERY------FNSSEMNWVDEGDGDVGIIACGL-- 256
Query: 294 RSALRAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
S + L L + +LK++++ P LIE +++++ V E
Sbjct: 257 -SYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIVVE 302
>gb|AAD17273.1| (AF119361) ferredoxin oxidoreductase a-subunit [Frankia sp. EuIK1]
Length = 671
Score = 73.4 bits (177), Expect = 4e-12
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 30 FYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIAS------IAAIIGASWAGAKAMTA 83
F YPITPA+++ ++ L V S AA A WA A
Sbjct: 258 FLGAYPITPATDVLHELS---KLTSHDVRHSRPRTRSRRSARRSAARSPACWASPSTSGA 314
Query: 84 TSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQSIWGTHGDHSLI 143
G + + + +V+VQRGGPSTG PT Q D++Q+++G HG+ L
Sbjct: 315 RHG---AQVPRRSACDLAGSCRWFIVNVQRGGPSTGLPTKTEQSDLLQALYGRHGEAPLP 371
Query: 144 VLSPSTVQEAFDFTIRAFNL-AEKYRTPVILLSDAEVGHMRERVYIPEPDEI 194
VL+ + + FD A + A RTPVILLSD+ + + E +P +E+
Sbjct: 372 VLAGESPADCFDAAFEAAQMRAGGRRTPVILLSDSYIANGSEPWKVPSVEEL 423
>pir||G75085 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-2)
PAB0718 - Pyrococcus abyssi (strain Orsay)
>gi|5458500|emb|CAB49988.1| (AJ248286) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-2)
[Pyrococcus abyssi]
Length = 613
Score = 71.0 bits (171), Expect = 2e-11
Identities = 84/334 (25%), Positives = 138/334 (41%), Gaps = 60/334 (17%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
+ G+EAIA A+ +G F GYP TP++E+ E +A P V +E ++ G
Sbjct: 5 LMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEV--FAEWAPNEKVALEEAAG 62
Query: 73 ASWAGAKAMTATSGPGFSLMQE---NIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDI 129
S+AG +++ G ++ + ++ Y+ + E +V++ GP T Q Q D
Sbjct: 63 VSYAGLRSLVTMKCVGLNVAADPLMSLAYSGV-EGGLVILVADDPGPHTSQ---TEQDD- 117
Query: 130 MQSIWGTHGDHSLI-VLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYI 188
+G +++ VL P QEA D A+ L+EKY+ PVI + V H V +
Sbjct: 118 -----RYYGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEV 172
Query: 189 PEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTV 248
E E+ NRK P+F + YV R R + +
Sbjct: 173 GEFVEL---NRK-----------------------PVFKKDIERYVRASMEGNRRRHKWL 206
Query: 249 EREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSA-LRAIKE-LREL 306
IR+I E+ + + E + GI+ A +KE L +
Sbjct: 207 -----NETIRKIEEEFNSMPFNWVEGEGK-----------LGIIVEGAPYNYVKEILPSI 250
Query: 307 GIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
G +LK++T P +L+ VE++ V E
Sbjct: 251 GEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIE 284
>pir||D71055 probable indolepyruvate ferredoxin oxidoreductase alpha subunit -
Pyrococcus horikoshii >gi|3257555|dbj|BAA30238.1|
(AP000005) 618aa long hypothetical indolepyruvate
ferredoxin oxidoreductase alpha subunit [Pyrococcus
horikoshii]
Length = 618
Score = 71.0 bits (171), Expect = 2e-11
Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
+ G+EAIA A+ AG F GYP TP++E+ E +A P V +E ++ G
Sbjct: 10 LMGNEAIAYGALEAGVSFATGYPGTPSTEVIETIARLKPEV--FAEWAPNEKVALEEAAG 67
Query: 73 ASWAGAKAMTATSGPGFSLMQE---NIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDI 129
AS+AG +++ G ++ + ++ Y+ + E +VV+ GP T Q Q D
Sbjct: 68 ASYAGIRSLVTMKCVGLNVAADPLMSLAYSGV-EGGLVVLVADDPGPHTSQ---TEQDD- 122
Query: 130 MQSIWGTHGDHSLI-VLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYI 188
+G SL+ VL P QEA D A+ L+EKY+ P+I + V H V +
Sbjct: 123 -----RYYGKISLLPVLEPYDPQEAHDLIKYAYELSEKYKVPIIFRTTTRVNHTTADVEV 177
Query: 189 PE 190
E
Sbjct: 178 GE 179
>sp|O07835|IORA_PYRKO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2209070|dbj|BAA20528.1| (D86221) indolepyruvate
ferredoxin oxidoreductase alpha subunit [Pyrococcus sp.]
Length = 647
Score = 70.6 bits (170), Expect = 3e-11
Identities = 83/343 (24%), Positives = 145/343 (42%), Gaps = 59/343 (17%)
Query: 8 GKADFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASI 67
G+ + G+ AI R A+ A +A YP TP+SE+ + +E +
Sbjct: 14 GERVLLLGNHAIERGALEANIAVFAAYPGTPSSELTIRWQTVAKKAGVYMEYSTNEKVAF 73
Query: 68 AAIIGASWAGAKAMTATSGPGFSLMQEN----IGYAVMTETPIVVVDVQRGGPSTGQPTL 123
+ A+W+G +AMTA G ++ ++ +G V I+V D P++
Sbjct: 74 ETALAAAWSGLRAMTAMKHVGLNVAADSFLSSVGMGVEGGFVIMVAD---------DPSM 124
Query: 124 -PSQGDIMQSIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHM 182
SQ + ++ + + VL PS+ EA + T AF L+EK++ VIL + H
Sbjct: 125 WSSQNEQDTRVYAKFAN--VPVLEPSSPHEAKEMTKYAFELSEKFKHFVILRTTTRSSHA 182
Query: 183 RERVYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDER 242
R V + E LP+ + K FG F + +V H +
Sbjct: 183 RGDVVLGE----------LPEEIKTGKRKFGK-----------FKKDPTRFVDVPAHARK 221
Query: 243 GRPRTVEREVHERVIRRIVEKIERNKKDI----FDY-EARELDDAEVAIVTTGIVARSAL 297
P I+EKIE+ ++++ F++ E +E DA+V I+ G+
Sbjct: 222 FHP-------------LILEKIEKIREELNNCPFNWIEGKE--DAKVGIIAPGLSYAYVK 266
Query: 298 RAIKELRELGIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
A+ L +K +LK+ T +P + L+ K +E++ + E
Sbjct: 267 EALAWLGVEDVK--ILKLGTPFPVPYGLLGKFFDGLEKVLIVE 307
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.140 0.407
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146513081
Number of Sequences: 2977
Number of extensions: 6453748
Number of successful extensions: 15647
Number of sequences better than 1.0e-10: 68
Number of HSP's better than 0.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 15471
Number of HSP's gapped (non-prelim): 82
length of query: 385
length of database: 189,106,746
effective HSP length: 55
effective length of query: 330
effective length of database: 156,189,961
effective search space: 51542687130
effective search space used: 51542687130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)