BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0347 (korB-2) DE:2-ketoglutarate ferredoxin oxidoreductase,
subunit beta (korB-2)
(281 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75168 2-ketoglutarate ferredoxin oxidoreductase, chain bet... 579 e-164
pir||E71046 probable ferredoxin oxidoreductase beta subunit - Py... 566 e-160
pir||D75168 2-ketoglutarate ferredoxin oxidoreductase, chain bet... 321 5e-87
pir||A71047 probable ferredoxin oxidoreductase beta subunit - Py... 317 1e-85
sp|O27113|KORB_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORB (2-KET... 314 1e-84
sp|Q57957|KORB_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORB (2-KET... 309 3e-83
pir||C72380 hypothetical protein TM0405 - Thermotoga maritima (s... 248 5e-65
gi|11498079 2-ketoglutarate ferredoxin oxidoreductase, subunit b... 239 3e-62
pir||F64593 pyruvate synthase (EC 1.2.7.1) beta chain - Helicoba... 237 1e-61
pir||H71919 chain of 2-oxoglutarate oxidoreductase - Helicobacte... 236 2e-61
pir||A81400 2-oxoglutarate synthase (EC 1.2.7.3) beta chain Cj05... 236 3e-61
gb|AAC38212.1| (AF021094) OorB subunit of 2-oxoglutarate:accepto... 226 3e-58
gb|AAK42927.1| 2-oxoacid--ferredoxin oxidoreductase, beta chain ... 170 2e-41
pir||S22397 pyruvate synthase (EC 1.2.7.1) beta chain [validated... 168 7e-41
dbj|BAB06092.1| (AP001515) pyruvate synthase beta subunit [Bacil... 164 8e-40
pir||C72519 probable 2-oxoacid--ferredoxin oxidoreductase beta c... 163 2e-39
pir||E70864 probable oxidoreductase - Mycobacterium tuberculosis... 162 3e-39
pir||JC4920 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) be... 162 4e-39
gb|AAG19012.1| (AE005001) pyruvate ferredoxin oxidoreductase, su... 159 5e-38
pir||H72626 probable 2-oxoacid--ferredoxin oxidoreductase, beta ... 157 1e-37
emb|CAC11405.1| (AL445063) probable pyruvate ferredoxin oxidored... 157 1e-37
gb|AAD17274.1| (AF119361) ferredoxin oxidoreductase b-subunit [F... 156 3e-37
emb|CAC11903.1| (AL445065) probable 2-oxoacid ferredoxin oxidore... 154 9e-37
emb|CAC08295.1| (AL392148) putative oxidoreductase [Streptomyces... 153 2e-36
emb|CAB60188.1| (AL132824) putative oxidoreductase beta-subunit ... 152 5e-36
pir||H69170 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) be... 150 2e-35
pir||C72288 2-oxoacid ferredoxin oxidoreductase, beta subunit - ... 150 2e-35
gi|11498356 2-oxoacid ferredoxin oxidoreductase, subunit beta (o... 145 8e-34
emb|CAA75642.1| (Y15464) ferredoxin oxidoreductase-like (beta su... 140 2e-32
sp|O26801|VORA_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 105 6e-22
pir||D70403 ferredoxin oxidoreductase beta subunit - Aquifex aeo... 83 3e-15
gi|11499292 pyruvate ferredoxin oxidoreductase, subunit beta (po... 83 5e-15
gb|AAK42866.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin ... 80 4e-14
dbj|BAA95606.1| (AB042412) pyruvate:ferredoxin oxidoreductase be... 79 7e-14
sp|Q51805|PORB_PYRFU PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 77 2e-13
emb|CAC11768.1| (AL445064) probable 2-ketovalerate ferredoxin ox... 77 2e-13
sp|O27880|IORA_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 76 6e-13
pir||A71858 pyruvate ferrodoxin oxidoreductase - Helicobacter py... 76 6e-13
pir||G64658 probable pyruvate synthase (EC 1.2.7.1) beta chain -... 75 8e-13
gb|AAC02294.1| (AF013980) pyruvate:ferredoxin oxidoreductase bet... 75 8e-13
gb|AAC38207.1| (AF021092) PorB subunit of pyruvate:flavodoxin ox... 75 8e-13
pir||F75046 pyruvate synthase (EC 1.2.7.1) beta chain PAB1476 - ... 74 2e-12
pir||F71114 probable ferredoxin oxidoreductase beta subunit - Py... 73 5e-12
sp|O58417|PORB_PYRHO PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 73 5e-12
sp|Q57714|PORB_METJA PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 69 6e-11
pir||C70400 ferredoxin oxidoreductase beta subunit - Aquifex aeo... 69 6e-11
gb|AAK41453.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin ... 69 8e-11
>pir||G75168 2-ketoglutarate ferredoxin oxidoreductase, chain beta (korb-2)
PAB0347 - Pyrococcus abyssi (strain Orsay)
>gi|5457940|emb|CAB49430.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit beta (korB-2)
[Pyrococcus abyssi]
Length = 281
Score = 579 bits (1477), Expect = e-164
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MRLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSS 60
MRLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSS
Sbjct: 1 MRLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSS 60
Query: 61 RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD 120
RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD
Sbjct: 61 RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD 120
Query: 121 VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF 180
VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF
Sbjct: 121 VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF 180
Query: 181 NYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKM 240
NYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKM
Sbjct: 181 NYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKM 240
Query: 241 KPEELEGKIVIGEFVDRDRPGLVREYKEYIKRAKKMMGWEE 281
KPEELEGKIVIGEFVDRDRPGLVREYKEYIKRAKKMMGWEE
Sbjct: 241 KPEELEGKIVIGEFVDRDRPGLVREYKEYIKRAKKMMGWEE 281
>pir||E71046 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3258090|dbj|BAA30773.1| (AP000006) 281aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 281
Score = 566 bits (1442), Expect = e-160
Identities = 270/281 (96%), Positives = 281/281 (99%)
Query: 1 MRLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSS 60
M+LVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQ+TLRAID+LGLDPDKIVWVSGIGCSS
Sbjct: 1 MKLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQFTLRAIDELGLDPDKIVWVSGIGCSS 60
Query: 61 RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD 120
RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD
Sbjct: 61 RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD 120
Query: 121 VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF 180
VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF
Sbjct: 121 VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF 180
Query: 181 NYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKM 240
NYIQGINSIKKAL+KEGF+LVEFLSPCPISFGRRN+MKTAPE+IRWYQKITVPINKAKKM
Sbjct: 181 NYIQGINSIKKALTKEGFSLVEFLSPCPISFGRRNKMKTAPEIIRWYQKITVPINKAKKM 240
Query: 241 KPEELEGKIVIGEFVDRDRPGLVREYKEYIKRAKKMMGWEE 281
KPEELEGKI+IGEFVDR+RPGLVREY+EYIKRAKKMMGWE+
Sbjct: 241 KPEELEGKIIIGEFVDRNRPGLVREYREYIKRAKKMMGWED 281
>pir||D75168 2-ketoglutarate ferredoxin oxidoreductase, chain beta (korb-1)
PAB0344 - Pyrococcus abyssi (strain Orsay)
>gi|5457937|emb|CAB49427.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit beta (korB-1)
[Pyrococcus abyssi]
Length = 284
Score = 321 bits (815), Expect = 5e-87
Identities = 157/271 (57%), Positives = 195/271 (71%), Gaps = 1/271 (0%)
Query: 12 KYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPG-FVNFDG 70
KYLRK+ LPT CPGCG G+VL AID L +DP +V VSGIGCS+ + + D
Sbjct: 13 KYLRKEALPTALCPGCGGGTVLNAFANAIDQLKIDPRDLVVVSGIGCSAWIASPYFLADT 72
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
LHTTHGRA+AFATG+K+ P+ ++ GDGD A+IGGNHLIHA RRN+D+TVIL+NNF
Sbjct: 73 LHTTHGRAIAFATGVKVGLPDKYVVVISGDGDLASIGGNHLIHAARRNIDITVILVNNFI 132
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YGMTGGQVAPTTP G TT PY E+P IA+ AAGA+YVARWT + Q I SIK
Sbjct: 133 YGMTGGQVAPTTPFGAITTTTPYRNIEHPLKIAETVAAAGASYVARWTTAHVYQLIESIK 192
Query: 191 KALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIV 250
+A++ +GF+LVE +S CP+ FGRRNRMK E++RW+ K +VPI+KAKKM EELEGK V
Sbjct: 193 RAITTKGFSLVEVISQCPVQFGRRNRMKEPAEMLRWFLKNSVPISKAKKMSEEELEGKFV 252
Query: 251 IGEFVDRDRPGLVREYKEYIKRAKKMMGWEE 281
IGEFV R+RP V E + I ++ G +E
Sbjct: 253 IGEFVKRERPEFVSELNKLIDEVQEKFGLKE 283
>pir||A71047 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3258094|dbj|BAA30777.1| (AP000006) 284aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 284
Score = 317 bits (803), Expect = 1e-85
Identities = 154/271 (56%), Positives = 192/271 (70%), Gaps = 1/271 (0%)
Query: 12 KYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPG-FVNFDG 70
KYLRK+ LPT CPGCG G+VL AID L +DP +V VSGIGCS+ + + D
Sbjct: 13 KYLRKEALPTALCPGCGGGTVLNAFANAIDQLKIDPRDLVVVSGIGCSAWIASPYFLADT 72
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
LHTTHGRA+AFATG+K+ P+ ++ GDGD A+IGGNHLIHA RRN+D+TVIL+NNF
Sbjct: 73 LHTTHGRAIAFATGVKVGLPDKYVVVISGDGDLASIGGNHLIHAARRNVDITVILVNNFI 132
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YGMTGGQVAPTTP G TT PY E+P +A+ AAGA+YVARWT + Q I SIK
Sbjct: 133 YGMTGGQVAPTTPFGAITTTTPYRNIEHPLKVAETVAAAGASYVARWTTAHVYQLIESIK 192
Query: 191 KALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIV 250
KAL +GF+LVE +S CP+ FGRRN+MK E++RW+ K ++PI+KAK M EELEGK V
Sbjct: 193 KALMTKGFSLVEVISQCPVQFGRRNKMKEPAEMLRWFLKNSIPISKAKNMSEEELEGKFV 252
Query: 251 IGEFVDRDRPGLVREYKEYIKRAKKMMGWEE 281
+GEFV R RP V E + I ++ G +E
Sbjct: 253 VGEFVKRKRPEFVTELNKLIDEVQERFGLKE 283
>sp|O27113|KORB_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORB (2-KETOGLUTARATE
OXIDOREDUCTASE BETA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|7431592|pir||A69005 2-oxoglutarate synthase (EC
1.2.7.3) beta chain MTH1034 [similarity] -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622137|gb|AAB85530.1| (AE000875) 2-oxoglutarate
oxidoreductase, beta subunit [Methanobacterium
thermoautotrophicum]
Length = 286
Score = 314 bits (795), Expect = 1e-84
Identities = 144/251 (57%), Positives = 190/251 (75%)
Query: 12 KYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGL 71
+YLR++ LP IFC GCG G VL + ++ G+D D I VSGIGCSSR+PG+VN D L
Sbjct: 10 RYLRRERLPHIFCAGCGNGIVLNSFFKGMEMAGIDFDNIAMVSGIGCSSRIPGYVNCDSL 69
Query: 72 HTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTY 131
HTTHGR ++FATG+KL NP L ++ F GDGDAAAIGGNHLIH RRN+D+TVI INN Y
Sbjct: 70 HTTHGRPISFATGLKLGNPSLDVVVFTGDGDAAAIGGNHLIHGARRNIDMTVICINNSIY 129
Query: 132 GMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKK 191
GMTGGQ++PT P+G G+TAPYG E+PFD+A+L AAGA+YVARWT + +Q NSIKK
Sbjct: 130 GMTGGQISPTFPEGSYGSTAPYGALEDPFDLAELVTAAGASYVARWTTAHPLQLANSIKK 189
Query: 192 ALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIVI 251
L GF+ +E +S CP FGR+NRM++ E++R+ ++ ++ KA KM+P+E+EGKI++
Sbjct: 190 GLKNRGFSFIEAISQCPTYFGRKNRMRSPVEMMRFMKENSLNRRKALKMEPDEVEGKIIV 249
Query: 252 GEFVDRDRPGL 262
GEF +R +P L
Sbjct: 250 GEFANRPQPEL 260
>sp|Q57957|KORB_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORB (2-KETOGLUTARATE
OXIDOREDUCTASE BETA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|2129229|pir||A64367 pyruvate synthase (EC 1.2.7.1)
beta chain - Methanococcus jannaschii
>gi|1591241|gb|AAB98531.1| (U67503) 2-ketoglutarate
ferredoxin oxidoreductase, subunit beta (korB)
[Methanococcus jannaschii]
Length = 270
Score = 309 bits (782), Expect = 3e-83
Identities = 143/263 (54%), Positives = 191/263 (72%)
Query: 12 KYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGL 71
KY+R+D LP IFC GCG G V+ L+AI++L + P+ + VSGIGCSSRVPG++ D L
Sbjct: 6 KYMRQDRLPHIFCSGCGNGIVMNCFLKAIEELNIKPEDYIAVSGIGCSSRVPGYLYCDSL 65
Query: 72 HTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTY 131
HTTHGR +AFATGIK+A P+ ++ F GDGD AAIGGNH IH RRN+D+TVI INN Y
Sbjct: 66 HTTHGRPIAFATGIKIARPDKHVVVFTGDGDLAAIGGNHFIHGCRRNIDLTVICINNNIY 125
Query: 132 GMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKK 191
GMTGGQV+PTTP G + TTAPYG EN D+ ++A+AAGA YVARWT + IQ + SIKK
Sbjct: 126 GMTGGQVSPTTPYGKKATTAPYGSIENTMDLCKMAIAAGATYVARWTTAHPIQLVRSIKK 185
Query: 192 ALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIVI 251
+ K+GF +E +S CP +GR N + ++I++ ++ ++ +NKAK M EEL GKIV+
Sbjct: 186 GIQKKGFAFIEVVSQCPTYYGRFNISRKPADMIKFLKENSIHLNKAKDMSEEELNGKIVV 245
Query: 252 GEFVDRDRPGLVREYKEYIKRAK 274
GEF+D ++P V E + I++ K
Sbjct: 246 GEFLDIEKPEFVEELHKLIEKLK 268
>pir||C72380 hypothetical protein TM0405 - Thermotoga maritima (strain MSB8)
>gi|4980910|gb|AAD35490.1|AE001720_4 (AE001720)
keto/oxoacid ferredoxin oxidoreductase, beta subunit,
putative [Thermotoga maritima]
Length = 266
Score = 248 bits (627), Expect = 5e-65
Identities = 120/264 (45%), Positives = 174/264 (65%), Gaps = 7/264 (2%)
Query: 13 YLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLH 72
YLR P+++CPGCG G VL+ L A+DDL L +K+ VSGIGCSSR G+++F+ LH
Sbjct: 9 YLRPGRWPSVWCPGCGNGIVLKAFLEAVDDLALPKEKVAVVSGIGCSSRATGYLDFNTLH 68
Query: 73 TTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYG 132
T HGRA+AFATG+KLA P+ +++ GDGD +IGGNH IHA RRN+D+TV++ NN YG
Sbjct: 69 TLHGRAIAFATGVKLAKPDFEVVVMGGDGDILSIGGNHFIHACRRNIDITVVIFNNMIYG 128
Query: 133 MTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKA 192
MTGGQV+ TTP+ + +T P G FE PFD ++A++AGA +VAR TV++Y + +KKA
Sbjct: 129 MTGGQVSSTTPQYYQTSTTPLGAFEKPFDAVEIALSAGATFVARSTVYHYDHLVRVLKKA 188
Query: 193 LSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIVIG 252
L G ++V+ L+ C FGR N M +++ +++ T + +PE EGKI IG
Sbjct: 189 LQHRGISVVDVLTNCHTYFGRYNGMPEPHQMMEYFKNNTCFLE-----RPE--EGKIKIG 241
Query: 253 EFVDRDRPGLVREYKEYIKRAKKM 276
F + ++ + Y+ ++ M
Sbjct: 242 IFREEEKEDFLTVYRRLTRKEGAM 265
>gi|11498079 2-ketoglutarate ferredoxin oxidoreductase, subunit beta (korB)
[Archaeoglobus fulgidus]
>gi|6685588|sp|O29782|KORB_ARCFU 2-OXOGLUTARATE SYNTHASE
SUBUNIT KORB (2-KETOGLUTARATE OXIDOREDUCTASE BETA CHAIN)
(KOR) (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE BETA
SUBUNIT) >gi|7431593|pir||D69308 probable 2-oxoglutarate
synthase (EC 1.2.7.3) beta chain - Archaeoglobus
fulgidus >gi|2650160|gb|AAB90769.1| (AE001072)
2-ketoglutarate ferredoxin oxidoreductase, subunit beta
(korB) [Archaeoglobus fulgidus]
Length = 267
Score = 239 bits (604), Expect = 3e-62
Identities = 115/196 (58%), Positives = 148/196 (74%), Gaps = 1/196 (0%)
Query: 13 YLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLH 72
YLR +MLPTI+C GC G VL +RA+ G + DK V VSGIGCS R+ +++F+ +H
Sbjct: 8 YLRTEMLPTIWCAGCPNGIVLASFIRAVKR-GFERDKTVVVSGIGCSGRITQYLDFETVH 66
Query: 73 TTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYG 132
TTHGRALAFATGIKLA PEL ++ FMGDGDA AIGGNH IHA RRN+D+T ++INN YG
Sbjct: 67 TTHGRALAFATGIKLAKPELNVVVFMGDGDAVAIGGNHFIHACRRNIDLTAVVINNSLYG 126
Query: 133 MTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKA 192
MTGGQ+APTTP+G + T+PYG E PFDIA+LA+AAGA+YVAR+T + +I +A
Sbjct: 127 MTGGQLAPTTPEGAKTKTSPYGNVERPFDIAKLAIAAGASYVARFTAYQPRWIEKAIFEA 186
Query: 193 LSKEGFTLVEFLSPCP 208
+ GF++VE ++ CP
Sbjct: 187 MQHHGFSVVEVVTGCP 202
>pir||F64593 pyruvate synthase (EC 1.2.7.1) beta chain - Helicobacter pylori
(strain 26695) >gi|2313708|gb|AAD07655.1| (AE000572)
ferredoxin oxidoreductase, beta subunit [Helicobacter
pylori 26695]
Length = 273
Score = 237 bits (598), Expect = 1e-61
Identities = 118/265 (44%), Positives = 167/265 (62%), Gaps = 1/265 (0%)
Query: 11 DKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG 70
D+YLR D +PT++C GCG G +L+ +R ID LG D + VSGIGCS R+ +VN +
Sbjct: 6 DEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNT 65
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
+HTTHGRA+A+ATGIK+ANP +I GDGD AIGGNH +HA RRN+D+ IL+NNF
Sbjct: 66 VHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFI 125
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YG+T Q +PTTP G+ TA +G +N FD L AAGA++VAR +V + + +K
Sbjct: 126 YGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLK 185
Query: 191 KALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIV 250
+ S +GF+ + S C I+ GR+N+M A ++++W + V + + M PEE K
Sbjct: 186 EGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFP 245
Query: 251 IGEFV-DRDRPGLVREYKEYIKRAK 274
G D DR Y+E I++A+
Sbjct: 246 TGVLKHDTDRKEYCEAYQEIIEKAQ 270
>pir||H71919 chain of 2-oxoglutarate oxidoreductase - Helicobacter pylori
(strain J99) >gi|4155085|gb|AAD06120.1| (AE001486)
SUBUNIT OF 2-OXOGLUTARATE OXIDOREDUCTASE [Helicobacter
pylori J99]
Length = 273
Score = 236 bits (597), Expect = 2e-61
Identities = 118/265 (44%), Positives = 167/265 (62%), Gaps = 1/265 (0%)
Query: 11 DKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG 70
D+YLR D +PT++C GCG G +L+ +R ID LG D + VSGIGCS R+ +VN +
Sbjct: 6 DEYLRVDKMPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNT 65
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
+HTTHGRA+A+ATGIKLANP +I GDGD AIGGNH +HA RRN+D+ IL+NNF
Sbjct: 66 VHTTHGRAVAYATGIKLANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFI 125
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YG+T Q +PTTP G+ TA +G +N FD L AAGA++VAR +V + + +K
Sbjct: 126 YGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLK 185
Query: 191 KALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIV 250
+ + +GF+ + S C I+ GR+N+M A ++++W + V + + M PEE K
Sbjct: 186 EGFTHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFP 245
Query: 251 IGEFV-DRDRPGLVREYKEYIKRAK 274
G D DR Y+E I++A+
Sbjct: 246 TGVLKHDTDRKEYCEAYQEIIEKAQ 270
>pir||A81400 2-oxoglutarate synthase (EC 1.2.7.3) beta chain Cj0537 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968005|emb|CAB75173.1| (AL139075) OORB subunit of
2-oxoglutarate:acceptor oxidoreductase [Campylobacter
jejuni]
Length = 281
Score = 236 bits (595), Expect = 3e-61
Identities = 123/266 (46%), Positives = 166/266 (62%), Gaps = 1/266 (0%)
Query: 11 DKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG 70
D+YLR D +PT +C GCG G VL+ +RAI+ LG + D + VSGIGCS R+ +VN +
Sbjct: 6 DEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDVCLVSGIGCSGRMSSYVNCNT 65
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
+HTTHGRA+A+ATGIKLANP +I GDGD AIGGNH IH RRN+D+T I+INNF
Sbjct: 66 VHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIGGNHTIHGCRRNIDLTHIVINNFI 125
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YG+T Q +PTTPKG TA +G + FD +L AAGA++VAR V + N I
Sbjct: 126 YGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACELTKAAGASFVARGNVIEANKLENLIY 185
Query: 191 KALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKIV 250
KAL+ +G++ V+ S C I+ GR+N+M A ++ W + V K + M EE + K
Sbjct: 186 KALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWIKNRVVDKAKFESMDFEERKDKFP 245
Query: 251 IGEF-VDRDRPGLVREYKEYIKRAKK 275
G D +P Y+E + AK+
Sbjct: 246 TGILHEDNSQPEYCHAYEEVRRAAKE 271
>gb|AAC38212.1| (AF021094) OorB subunit of 2-oxoglutarate:acceptor oxidoreductase
[Helicobacter pylori]
Length = 274
Score = 226 bits (569), Expect = 3e-58
Identities = 115/266 (43%), Positives = 166/266 (62%), Gaps = 2/266 (0%)
Query: 11 DKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG 70
D+YLR D +PT++C GCG G +L+ +R ID LG D + VSGIGCS R+ +VN +
Sbjct: 6 DEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNT 65
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
+HTTHGRA+A+ATGIK+ANP +I GDGD AIGGNH +HA RRN+D+ IL+NNF
Sbjct: 66 VHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFI 125
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YG+T ++ P P G+ TA +G +N FD L AAGA++VAR +V + + +K
Sbjct: 126 YGLTTPKLRPPRPNGMWSVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLK 185
Query: 191 KALSKEGFTLVEFL-SPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKI 249
+ S +GF+ + + S C I+ GR+N+M A ++++W + V + + M PEE K
Sbjct: 186 EGFSHKGFSFFDDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKF 245
Query: 250 VIGEFV-DRDRPGLVREYKEYIKRAK 274
G D DR Y+E I++A+
Sbjct: 246 PTGVLKHDTDRKEYCEAYQEIIEKAQ 271
>gb|AAK42927.1| 2-oxoacid--ferredoxin oxidoreductase, beta chain [Sulfolobus
solfataricus]
Length = 316
Score = 170 bits (426), Expect = 2e-41
Identities = 84/188 (44%), Positives = 117/188 (61%), Gaps = 2/188 (1%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNF--DGLHTTHGRALA 80
+CPGCG +L +AI +LGLDP K+V VSGIGCS ++P F+ G+HT HGRAL
Sbjct: 22 WCPGCGNFGILSAEQQAIQELGLDPKKVVLVSGIGCSGKIPHFIRLPASGVHTLHGRALT 81
Query: 81 FATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAP 140
FA GIKLANP L++I GDGD IG H + A RRN+D+TVI+ NN YG+T GQ +P
Sbjct: 82 FAIGIKLANPSLEVIVNGGDGDQLGIGVGHFVSAGRRNVDLTVIVHNNGVYGLTKGQASP 141
Query: 141 TTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTL 200
T G++ + P + + LA+++G +VAR ++ IKKA+ +G +
Sbjct: 142 TLKLGVKTKSLPKPNINSDINPIALAISSGYTFVARGYAYDVKHLKEIIKKAIKHKGLAM 201
Query: 201 VEFLSPCP 208
++ L PCP
Sbjct: 202 IDVLQPCP 209
>pir||S22397 pyruvate synthase (EC 1.2.7.1) beta chain [validated] -
Halobacterium salinarum >gi|43499|emb|CAA45826.1|
(X64521) pyruvate synthase [Halobacterium halobium]
>gi|10580667|gb|AAG19513.1| (AE005043) putative
2-ketoglutarate ferredoxin oxidoreductase (beta); KorB
[Halobacterium sp. NRC-1]
Length = 312
Score = 168 bits (421), Expect = 7e-41
Identities = 79/186 (42%), Positives = 118/186 (62%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG VL+ A+ +LG DP++I+ +GIGCS ++ + + G HT HGR+L A
Sbjct: 29 WCPGCGDFGVLKALKGAMAELGKDPEEILLATGIGCSGKLNSYFDSYGFHTIHGRSLPVA 88
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
KLAN +L+++A GDGD IGGNH +H R N D+T I+ NN +G+T GQ +PT+
Sbjct: 89 RAAKLANHDLEVVAAGGDGDGYGIGGNHFMHTARENHDITYIVFNNEVFGLTKGQTSPTS 148
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
PKG + T P+G ++P L++ +GA+YVAR N Q + + +A+ +GF V+
Sbjct: 149 PKGHKSKTQPHGSAKSPIRPLSLSMTSGASYVARTAAVNPNQAKDILVEAIQHDGFAHVD 208
Query: 203 FLSPCP 208
FL+ CP
Sbjct: 209 FLTQCP 214
>dbj|BAB06092.1| (AP001515) pyruvate synthase beta subunit [Bacillus halodurans]
Length = 288
Score = 164 bits (412), Expect = 8e-40
Identities = 78/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG SV RA ++GL+PD++ +SGIGCS R+ G++N G H HGR L A
Sbjct: 15 WCPGCGDFSVQAAIQRAAANVGLEPDQLAVISGIGCSGRISGYINAYGFHGVHGRVLPIA 74
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
G+K+AN ++ +IA GDGD AIG H +HAIRRN+++T I+++N YG+T GQ +P +
Sbjct: 75 QGVKMANRDVTVIASGGDGDGFAIGMGHTVHAIRRNINITYIVMDNQIYGLTKGQTSPRS 134
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
G + + P G E+ ++ ++A+ AGA +VA+ + + I+K ++ GF+L+
Sbjct: 135 DVGFKTKSTPSGSVESALNVMEMALTAGATFVAQSFSSDLKELTALIEKGINHNGFSLIN 194
Query: 203 FLSPCPISFGRRN 215
SPC ++F + N
Sbjct: 195 VFSPC-VTFNKVN 206
>pir||C72519 probable 2-oxoacid--ferredoxin oxidoreductase beta chain APE2128 -
Aeropyrum pernix (strain K1) >gi|5105827|dbj|BAA81139.1|
(AP000063) 318aa long hypothetical 2-oxoacid--ferredoxin
oxidoreductase beta chain [Aeropyrum pernix]
Length = 318
Score = 163 bits (408), Expect = 2e-39
Identities = 84/189 (44%), Positives = 121/189 (63%), Gaps = 8/189 (4%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG +L +A +L LDP + V VSGIGCSS+ P F+N +G+HT HGR +AFA
Sbjct: 17 WCPGCGDFGILAAMQKAFAELNLDPAQTVVVSGIGCSSKTPHFINVNGVHTIHGRGIAFA 76
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
TGIKLANP+LK+I GDGD IG H + RRNLDVTV++ NN YG+T GQ +PT
Sbjct: 77 TGIKLANPQLKVIVNGGDGDLLGIGVAHFVALGRRNLDVTVLIHNNKVYGLTKGQASPTL 136
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVAR----WTVFNYIQGINSIKKALSKEGF 198
+G + + P ++ + LA+A+G +VAR W ++++ I +K A++ +G
Sbjct: 137 RRGEKVKSLPVPNLQDAVNPIALAIASGYTFVARAYSLWV--DHLKEI--LKAAINHKGS 192
Query: 199 TLVEFLSPC 207
+++ L PC
Sbjct: 193 AVIDVLQPC 201
>pir||E70864 probable oxidoreductase - Mycobacterium tuberculosis (strain H37RV)
>gi|2791494|emb|CAA16031.1| (AL021246) hypothetical
protein Rv2454c [Mycobacterium tuberculosis]
Length = 373
Score = 162 bits (407), Expect = 3e-39
Identities = 83/188 (44%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG +L + +LGL + IV++SGIGCSSR P ++ G H+ HGRA A A
Sbjct: 55 WCPGCGDYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLETYGFHSIHGRAPAIA 114
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
TG+ LA +L + GDGDA +IGGNHLIHA+RRN++VT++L NN YG+T GQ +PT+
Sbjct: 115 TGLALAREDLSVWVVTGDGDALSIGGNHLIHALRRNINVTILLFNNRIYGLTKGQYSPTS 174
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSK-EGFTLV 201
G + P G ++PF+ LA+ A A +V R + + G+ + +A ++ G LV
Sbjct: 175 EVGKVTKSTPMGSLDHPFNPVSLALGAEATFVGR-ALDSDRNGLTEVLRAAAQHRGAALV 233
Query: 202 EFLSPCPI 209
E L CPI
Sbjct: 234 EILQDCPI 241
>pir||JC4920 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) beta chain -
Sulfolobus sp. (strain 7) >gi|1565184|dbj|BAA10899.1|
(D64024) 2-oxoacid:ferredoxin oxidoreductase subunit
beta [Sulfolobus sp. 7]
Length = 305
Score = 162 bits (406), Expect = 4e-39
Identities = 91/229 (39%), Positives = 132/229 (56%), Gaps = 5/229 (2%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVN--FDGLHTTHGRALA 80
+CPGCG +L +AI +LG+D +V VSGIGCS ++P F G+HT HGRA+A
Sbjct: 11 WCPGCGNFGILNAEQQAIVELGVDTKNVVVVSGIGCSGKIPHFFRTPISGVHTLHGRAIA 70
Query: 81 FATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAP 140
FATGIKL+NP+L +I GDGD IG H + A RRN+D+ VIL +N YG+T GQ +P
Sbjct: 71 FATGIKLSNPDLVVIVNGGDGDLLGIGAGHFVAAGRRNVDMVVILHDNGVYGLTKGQASP 130
Query: 141 TTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTL 200
T +G + + P + + LA+++G +VAR ++ IK A+ +G L
Sbjct: 131 TLKRGEKPKSLPRPNINDAVNPIALAISSGYTFVARGYAYDVKHLKELIKSAIKHKGLAL 190
Query: 201 VEFLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKPEELEGKI 249
++ L PCP ++ N + + R Y+ T+P KPEE+ KI
Sbjct: 191 IDVLQPCP-TYNDINTKEWYDK--RIYKLDTLPDWDPVVKKPEEVNEKI 236
>gb|AAG19012.1| (AE005001) pyruvate ferredoxin oxidoreductase, subunit beta; PorB
[Halobacterium sp. NRC-1]
Length = 289
Score = 159 bits (397), Expect = 5e-38
Identities = 76/204 (37%), Positives = 125/204 (61%), Gaps = 1/204 (0%)
Query: 4 VSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVP 63
+S+ +R + D PT +CPGCG + ++A+ + G PD V+GIGCS ++
Sbjct: 1 MSSENVRFTDFKSDKQPT-WCPGCGDFGTMNGMMKALAETGNSPDDTFVVAGIGCSGKIG 59
Query: 64 GFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTV 123
++ LH HGRAL TG+KLANP+L+++ GDGD +IG H IHA+RRN+D+T
Sbjct: 60 TYMRSYALHGVHGRALPVGTGVKLANPDLEVMVAGGDGDGYSIGAGHFIHAVRRNVDITY 119
Query: 124 ILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYI 183
++++N YG+T GQ +PT+ +T+P G + P + LA+AAG +++A+ + +
Sbjct: 120 VVMDNRIYGLTKGQASPTSRSDFETSTSPDGPKQPPVNPLALAMAAGGSFIAQSFSSDAL 179
Query: 184 QGINSIKKALSKEGFTLVEFLSPC 207
+ +++A+ +GF+LV SPC
Sbjct: 180 RHQEIVQEAIEHDGFSLVNTFSPC 203
>pir||H72626 probable 2-oxoacid--ferredoxin oxidoreductase, beta chain APE1472 -
Aeropyrum pernix (strain K1) >gi|5105156|dbj|BAA80470.1|
(AP000061) 309aa long hypothetical 2-oxoacid--ferredoxin
oxidoreductase , beta chain [Aeropyrum pernix]
Length = 309
Score = 157 bits (394), Expect = 1e-37
Identities = 78/186 (41%), Positives = 105/186 (55%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG +L RA+ +LG+DP+ + V GIGCS R +V H HGRA+ A
Sbjct: 16 WCPGCGDFGILNSIYRAVSELGIDPENLAVVGGIGCSGRTTYYVKGSNFHALHGRAIPVA 75
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
TG+KLANP L +I GDGD IGG H + RRNL++TV+L +N YG+T GQ APT
Sbjct: 76 TGVKLANPHLNVIVAGGDGDLMGIGGGHFVALGRRNLNITVLLFDNAVYGLTKGQAAPTL 135
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
P ++ + + LA AAG ++AR ++ Q IK A+ G LV+
Sbjct: 136 PAWVKTKALSMPNIHDNINPVLLAFAAGYTFIARGYAYHTQQLKELIKTAVRHRGAALVD 195
Query: 203 FLSPCP 208
L PCP
Sbjct: 196 ILQPCP 201
>emb|CAC11405.1| (AL445063) probable pyruvate ferredoxin oxidoreductase, beta
subunit [Thermoplasma acidophilum]
Length = 285
Score = 157 bits (394), Expect = 1e-37
Identities = 89/244 (36%), Positives = 136/244 (55%), Gaps = 5/244 (2%)
Query: 19 LPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRA 78
+P +CPGCG + L A+ +L +DP +V SGIGCSS +P F+N G H HGR
Sbjct: 14 VPPDWCPGCGNFAQLSAITMALAELKIDPKDVVVASGIGCSSNMPEFLNTYGFHGLHGRL 73
Query: 79 LAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQV 138
+ FA G+K AN +L +IA+ GDGD G H H +RN+D+T ++ +N +G+T GQ
Sbjct: 74 VPFAAGVKWANSKLTVIAYGGDGDGFFEGTQHFYHTAKRNVDITYMVSDNQVFGLTTGQA 133
Query: 139 APTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK-KALSKEG 197
+PT P GL+ T P G E PF+ A+ AGA +VAR I+ + I +A+ +G
Sbjct: 134 SPTAPIGLKTKTTPDGNIETPFNPIAFALNAGATFVAR-AFSGDIKHLKDITVRAIKHKG 192
Query: 198 FTLVEFLSPCPISFGRRNRMK-TAPELIRWYQKITVPINKAKKMKPEELEGKIVIGEFVD 256
F+ ++ +SPC +++ + N + P + ++A K+ E I IG F +
Sbjct: 193 FSFIDVISPC-VTWNKENSYEYFRPRVYHLENNDVTNFDQAYKL-AFEWGDHIPIGVFYE 250
Query: 257 RDRP 260
+RP
Sbjct: 251 VERP 254
>gb|AAD17274.1| (AF119361) ferredoxin oxidoreductase b-subunit [Frankia sp. EuIK1]
Length = 346
Score = 156 bits (390), Expect = 3e-37
Identities = 74/186 (39%), Positives = 115/186 (61%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG ++L + LG+ + V VSGIGCSSR+P ++ G+H+ HGRA + A
Sbjct: 23 WCPGCGDHAILNGMRNLLPTLGIPRENFVVVSGIGCSSRLPYYLETYGVHSIHGRAPSIA 82
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
TGI + P+L + GDGD+ +IGGNHLIHA+RRN+++ ++++NN YG+T GQ +P T
Sbjct: 83 TGISINRPDLSVWVVTGDGDSLSIGGNHLIHAVRRNVNLKIVMLNNQIYGLTKGQFSPAT 142
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
G ++P+G ++ F+ A LA+ A A ++AR + + + A + +G LVE
Sbjct: 143 KPGTVTPSSPFGSLDHSFNPAALALGAEATFLARTVDTDRKHMLEMLAAAYAHDGSALVE 202
Query: 203 FLSPCP 208
CP
Sbjct: 203 IRQNCP 208
>emb|CAC11903.1| (AL445065) probable 2-oxoacid ferredoxin oxidoreductase, beta chain
[Thermoplasma acidophilum]
Length = 309
Score = 154 bits (386), Expect = 9e-37
Identities = 81/220 (36%), Positives = 119/220 (53%), Gaps = 8/220 (3%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG +L A+ +L L P + +SGIGCS + P +VN G HT HGRA+ A
Sbjct: 15 WCPGCGDFGILTALTSALQELNLGPHDVAVISGIGCSGKTPHYVNAAGAHTLHGRAIPVA 74
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
G+KL NP+LK+I GDGD +IG HL+ RRN +TV++ +N YG+T GQ APT
Sbjct: 75 VGVKLTNPKLKVIVTGGDGDLMSIGAGHLVAEGRRNSGITVLMYDNAVYGLTKGQAAPTL 134
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
G++ + + + LA++ G ++VAR F N IK+A+ G + ++
Sbjct: 135 KLGVQTKSLARPNIYDAINPIMLAISTGYSFVARGFSFEIAHLKNIIKQAVMFPGSSFID 194
Query: 203 FLSPCPISFGRRNRMKTAPELIRWYQKITVPINKAKKMKP 242
L PCP ++ N M WY+K ++ K P
Sbjct: 195 ILQPCP-TYNNINTMD-------WYKKRVYKLDDDKSWDP 226
>emb|CAC08295.1| (AL392148) putative oxidoreductase [Streptomyces coelicolor]
Length = 352
Score = 153 bits (383), Expect = 2e-36
Identities = 78/187 (41%), Positives = 113/187 (59%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG ++L + LGL + IV+VSGIGCSSR P ++N G+H+ HGRA A A
Sbjct: 31 WCPGCGDYAILAAVQGFMPQLGLARENIVFVSGIGCSSRFPYYMNTYGMHSIHGRAPAIA 90
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
TG+ + +L + GDGDA +IGGNHLIHA+RRN+++ ++L NN YG+T GQ +PT+
Sbjct: 91 TGLATSRRDLSVWVVTGDGDALSIGGNHLIHALRRNVNLKILLFNNRIYGLTKGQYSPTS 150
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
G + P G + PF+ LA+ A A++VAR + +++A G L+E
Sbjct: 151 EVGKITKSTPMGSLDAPFNPISLALGAEASFVARTVDSDRKHLTEVLRQAAEHPGTALIE 210
Query: 203 FLSPCPI 209
C I
Sbjct: 211 IYQNCNI 217
>emb|CAB60188.1| (AL132824) putative oxidoreductase beta-subunit [Streptomyces
coelicolor]
Length = 350
Score = 152 bits (380), Expect = 5e-36
Identities = 78/187 (41%), Positives = 113/187 (59%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG ++L + LGL + IV+VSGIGCSSR P ++N G+H+ HGRA A A
Sbjct: 31 WCPGCGDYAILAAVQGFMPQLGLARENIVFVSGIGCSSRFPYYMNTYGMHSIHGRAPAIA 90
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
TG+ + +L + GDGDA +IGGNHLIHA+RRN+++ ++L NN YG+T GQ +PT+
Sbjct: 91 TGLATSRRDLSVWVVTGDGDALSIGGNHLIHALRRNVNLKILLFNNRIYGLTKGQYSPTS 150
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
G + P G + PF+ LA+ A A++VAR + +++A G L+E
Sbjct: 151 EVGKITKSTPMGSLDAPFNPIFLALGAEASFVARTVDSDRKHLTEVLRQAAEHPGTALIE 210
Query: 203 FLSPCPI 209
C I
Sbjct: 211 IYQNCNI 217
>pir||H69170 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) beta chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621611|gb|AAB85043.1| (AE000836)
2-oxoacid:ferredoxin oxidoreductase, beta subunit
[Methanobacterium thermoautotrophicum]
Length = 288
Score = 150 bits (375), Expect = 2e-35
Identities = 79/193 (40%), Positives = 115/193 (58%), Gaps = 1/193 (0%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG S+L+ A+ DL + P+++V VSGIG + ++P ++ + + HGR+L A
Sbjct: 14 WCPGCGNFSILRALKMALADLDILPERLVLVSGIGQAGKLPQYLKCNHFNGLHGRSLPAA 73
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
IK NP+L +I GDG GGNHLIH IRRN D+T I+ N YG+T GQ +PT+
Sbjct: 74 VAIKATNPQLTVIDVSGDGCMYGEGGNHLIHNIRRNPDITTIVHGNMVYGLTKGQASPTS 133
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVE 202
G R G FE PF+ +AVA GA +VAR + + + + +A+S G+ LV+
Sbjct: 134 QPGFRTPVQVQGVFEEPFNPLAVAVALGATFVARAFSGDVERTRDILVEAISHHGYALVD 193
Query: 203 FLSPCPISFGRRN 215
PC ++F R N
Sbjct: 194 IFQPC-VTFNRVN 205
>pir||C72288 2-oxoacid ferredoxin oxidoreductase, beta subunit - Thermotoga
maritima (strain MSB8)
>gi|4981714|gb|AAD36241.1|AE001773_10 (AE001773)
2-oxoacid ferredoxin oxidoreductase, beta subunit
[Thermotoga maritima]
Length = 282
Score = 150 bits (375), Expect = 2e-35
Identities = 81/221 (36%), Positives = 130/221 (58%), Gaps = 11/221 (4%)
Query: 11 DKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG 70
D+Y+ +D+ +CPGCG + ++A+++L +DP ++V VSGIG ++++P +V +
Sbjct: 4 DEYISRDIA---WCPGCGNFGIRTALMKALEELNVDPRQVVIVSGIGQAAKMPQYVGVNM 60
Query: 71 LHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
+ HGRAL AT IK NP L +IA GDG GGNH IH IRRN D+ I+ +N
Sbjct: 61 FNGLHGRALPVATAIKTTNPNLLVIAESGDGCMYGEGGNHFIHTIRRNPDIVNIVHDNQV 120
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIK 190
YG+T GQ +PT+ KG + G PF+ +A+A A++VAR + + + +K
Sbjct: 121 YGLTKGQASPTSLKGFKTPVQVDGVILEPFNPLAVAIALDASFVARTFIGDIEFTKDILK 180
Query: 191 KALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIRWYQKIT 231
+A+ +G+ LV+ L PC ++F + N + WY++ T
Sbjct: 181 EAMKHKGYALVDILQPC-VTFNKLNTYE-------WYRENT 213
>gi|11498356 2-oxoacid ferredoxin oxidoreductase, subunit beta (orB)
[Archaeoglobus fulgidus] >gi|7431604|pir||F69343
2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) beta
chain - Archaeoglobus fulgidus
>gi|2649862|gb|AAB90490.1| (AE001053) 2-oxoacid
ferredoxin oxidoreductase, subunit beta (orB)
[Archaeoglobus fulgidus]
Length = 245
Score = 145 bits (361), Expect = 8e-34
Identities = 75/194 (38%), Positives = 109/194 (55%), Gaps = 1/194 (0%)
Query: 18 MLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGR 77
M+ +CPGCG ++L+ RA + + I SGIGC ++ +++ G H HGR
Sbjct: 1 MVRITWCPGCGNFAILKAFERASRRVIEEGFDIAVSSGIGCHGKISDYLSLPGFHVIHGR 60
Query: 78 ALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQ 137
F TG+KLANP L ++ F GDGD G HL+HA RRN D+T+IL NN +G+T GQ
Sbjct: 61 VPPFLTGLKLANPNLVVVGFSGDGDGLNEGVEHLVHAARRNTDITIILHNNGVFGLTTGQ 120
Query: 138 VAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEG 197
V T+P+G + + P G E P + L + +GA +VAR + A+ +G
Sbjct: 121 VTATSPRGRKSRSTPRGNPEYPLNPCHLMLVSGATFVARVFAGEQERLSEVFYNAMKHKG 180
Query: 198 FTLVEFLSPCPISF 211
F+ VE + PC +SF
Sbjct: 181 FSFVEVMQPC-VSF 193
>emb|CAA75642.1| (Y15464) ferredoxin oxidoreductase-like (beta subunit) [Thermus
thermophilus]
Length = 305
Score = 140 bits (350), Expect = 2e-32
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 23 FCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFA 82
+CPGCG +L A+ +L DP + SGIGCS++ P ++N G+HT HGR L A
Sbjct: 17 WCPGCGDYGILSALQMALFELKRDPSQTAVFSGIGCSAKTPHYLNVYGVHTLHGRVLPVA 76
Query: 83 TGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTT 142
G KLANP L ++A GDGD IG H + A RRN+D+ IL +N YG+T GQ PT
Sbjct: 77 QGAKLANPHLTVVAVGGDGDGLGIGAGHFVAAGRRNVDMLYILYDNEVYGLTKGQAGPTL 136
Query: 143 PKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINS-IKKALSKEGFTLV 201
G + + P ++ + LA AAG ++AR ++ ++G+ IK+ + G +
Sbjct: 137 GLGEKTKSLPKPNPQSRLNPLLLAFAAGYTWIARGYAYD-VKGLKELIKEGIEHRGLAFL 195
Query: 202 EFLSPCP 208
L PCP
Sbjct: 196 HVLQPCP 202
>sp|O26801|VORA_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT) >gi|7482018|pir||B69194
2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) beta
chain - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621791|gb|AAB85210.1| (AE000849)
2-oxoisovalerate oxidoreductase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 477
Score = 105 bits (260), Expect = 6e-22
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 21 TIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALA 80
T +C GCG G + + A+D+LG+ ++ V +S +GC+ + + + HGRA A
Sbjct: 27 THYCAGCGHGILHKLIGEAMDELGIQ-ERAVMISPVGCAVFAYYYFDCGNVQVAHGRAPA 85
Query: 81 FATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAP 140
TGI A + +I + GDGD A+IG N I A R + V +NN YGMTGGQ+AP
Sbjct: 86 VGTGISRAEDDAVVILYQGDGDLASIGLNETIQAANRGEKLAVFFVNNTVYGMTGGQMAP 145
Query: 141 TTPKGLRGTTAPYGQFEN----PFDIAQLAVAAGAN-YVARWTVFN---YIQGINSIKKA 192
TT G T P G+ P + +L A ++ R ++ + + +IK+A
Sbjct: 146 TTLVGEVTVTCPTGRDPRYAGYPLHMCELLDNLQAPVFIERVSLADPKRIRRARRAIKRA 205
Query: 193 L----SKEGFTLVEFLSPCP 208
L +G+ VE LSPCP
Sbjct: 206 LEIQRDGKGYAFVEVLSPCP 225
>pir||D70403 ferredoxin oxidoreductase beta subunit - Aquifex aeolicus
>gi|2983645|gb|AAC07212.1| (AE000728) ferredoxin
oxidoreductase beta subunit [Aquifex aeolicus]
Length = 286
Score = 83.5 bits (203), Expect = 3e-15
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFAT 83
C GC + +Y L ++ P+ V V+ GC+S V + +H G A A+
Sbjct: 52 CAGCPESAAFRYILASLPS----PEDTVIVNSTGCTSLVFPHIALHTVHPLFGNQNAVAS 107
Query: 84 GIK------LANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQ 137
GIK + ++ GDG IG + + + R +T I +N Y TGGQ
Sbjct: 108 GIKRVLEWRFPDKPKDVVVIAGDGATIDIGLDCTLQSFFRQEKITTICFDNEVYANTGGQ 167
Query: 138 VAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKAL---S 194
+ TP+G+ AP G+ + + QLA+ +G +YVAR TV + + +KKA+
Sbjct: 168 DSGATPRGMEFKMAPGGKQWDKVPMWQLAIDSGCHYVARLTVSSPKKVEQVVKKAIYVAR 227
Query: 195 KEGFTLVEFLSPCPISFGRRN------RMKTAPELIRWYQKITVPINKAKKMKPEE 244
+ G T + +PC + G + + E ++++ +T + K K EE
Sbjct: 228 EVGPTYIHLYTPCILEIGLNSDQGLWEMRQRDKERFKFFEYMTDEAKEVIKKKKEE 283
>gi|11499292 pyruvate ferredoxin oxidoreductase, subunit beta (porB)
[Archaeoglobus fulgidus] >gi|7431599|pir||E69462
probable pyruvate synthase (EC 1.2.7.1) beta chain -
Archaeoglobus fulgidus >gi|2648852|gb|AAB89547.1|
(AE000986) pyruvate ferredoxin oxidoreductase, subunit
beta (porB) [Archaeoglobus fulgidus]
Length = 294
Score = 82.7 bits (201), Expect = 5e-15
Identities = 65/206 (31%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFV-----NFDGLHTTHGRA 78
CPGCG+ ++ L +D K+ V+ GC + N +H+ A
Sbjct: 11 CPGCGLPIAVKTVLNLLDG------KVFAVNSTGCLEIISSQYGKNAWNVPYIHSLFENA 64
Query: 79 LAFATGIKLANPELK------IIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYG 132
A A G++ A LK ++ F GDG A IG L A RN D+ I ++N Y
Sbjct: 65 AAVAAGVEAALRALKRKDEGHVVVFAGDGATADIGIGTLSGAFDRNHDILYICLDNEAYQ 124
Query: 133 MTGGQVAPTTPKGLRGTTAPY-----GQFENPFDIAQLAVAAGANYVARWTVFNYIQGI- 186
TG Q + TP G TT P G+ D+ +AVA G YVA +V Y+ I
Sbjct: 125 NTGHQQSGLTPPGESTTTTPAGKVLPGKVGRKKDMISIAVAHGIPYVASSSV-GYVSDIR 183
Query: 187 NSIKKALSKEGFTLVEFLSPCPISFG 212
+KKA+ EG ++ SPC +G
Sbjct: 184 RKVKKAVKFEGAKYIQIHSPCVTGWG 209
>gb|AAK42866.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin oxidoreductase
beta chain) (porB-2) [Sulfolobus solfataricus]
Length = 299
Score = 79.6 bits (193), Expect = 4e-14
Identities = 63/197 (31%), Positives = 90/197 (44%), Gaps = 15/197 (7%)
Query: 21 TIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFV-----NFDGLHTTH 75
T CPGC ++ +GL D +V V GCSS + G NF ++
Sbjct: 19 TSACPGCPENMAMRML-----GMGLGKD-VVLVVVAGCSSVIQGNAPYNAYNFPTVNVAF 72
Query: 76 GRALAFATGI----KLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTY 131
A A G+ K + I+ + GDG +A IG L A RN ++ + ++N Y
Sbjct: 73 AAGPATAAGLARAYKQKGKNVTIVVWAGDGGSADIGFASLSGAAERNDNILYLTVDNEAY 132
Query: 132 GMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKK 191
+GGQ + +TP G TT P G+ EN ++ L +A YVA +V I +KK
Sbjct: 133 MNSGGQRSGSTPFGAITTTTPEGKKENKKNLPLLMIAHNVPYVATASVGYPHDYIEKLKK 192
Query: 192 ALSKEGFTLVEFLSPCP 208
A EGF V L+P P
Sbjct: 193 ARQVEGFRYVHVLTPDP 209
>dbj|BAA95606.1| (AB042412) pyruvate:ferredoxin oxidoreductase beta subunit
[Hydrogenobacter thermophilus]
Length = 286
Score = 78.8 bits (191), Expect = 7e-14
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFAT 83
C GC L+Y L ++ + P+ + V+ GC+S V + +H+ G A A+
Sbjct: 52 CAGCPESMALRYILASLPN----PEDTIIVNSTGCTSLVFPHIALHTVHSLFGNQNAVAS 107
Query: 84 GIK------LANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQ 137
GIK + ++ GDG IG + + + R +T I +N Y TGGQ
Sbjct: 108 GIKRVLEWRFPDKVKDVVVLAGDGAIVDIGLDCTLQSFFRQEKITTICFDNEVYANTGGQ 167
Query: 138 VAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKAL---S 194
+ T KG AP G+ + + Q+A+ +G +YVAR TV + + + IKKA+
Sbjct: 168 ESGMTVKGHVFKMAPKGKQWDKVPMWQIAIDSGCHYVARLTVSSPKRVESVIKKAIYVAR 227
Query: 195 KEGFTLVEFLSPCPISFG 212
+ G T V +PC + G
Sbjct: 228 EVGPTYVHLYTPCILEIG 245
>sp|Q51805|PORB_PYRFU PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|11252319|pir||T45089 pyruvate synthase (EC 1.2.7.1)
beta chain [imported] - Pyrococcus furiosus
>gi|1197364|emb|CAA59506.1| (X85250) pyruvate ferredoxin
oxidoreductase beta-2 [Pyrococcus furiosus]
Length = 331
Score = 77.3 bits (187), Expect = 2e-13
Identities = 82/305 (26%), Positives = 124/305 (39%), Gaps = 50/305 (16%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGL----DPDKIVWVSGIGCSSRVPGFVNFDG-----LHTT 74
C GCG + L+ +A+ + DP+ GC V + +H
Sbjct: 21 CAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCMEVVSAVFPYTAWKAPWIHVA 80
Query: 75 HGRALAFATGIKLANPEL----KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
A A A+GI+ A +L KI+A GDG A IG L + R +V ++ +N
Sbjct: 81 FENAAAVASGIEAAWKKLGRKGKILAIGGDGGTADIGLQALSGMLERWHNVLYLMYDNEA 140
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFD-----IAQLAVAAGANYVARWTVFNYIQG 185
Y TG Q + +TP G TT+P G++ D +A +A A YVA ++ N +
Sbjct: 141 YMNTGIQRSSSTPYGAWTTTSPPGKYSVGEDKPKKWVALIAAAHQIPYVATASIGNPLDF 200
Query: 186 INSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIR------------------WY 227
+ IKKA +G V+ L CP G R+ ++ E+ R W
Sbjct: 201 VRKIKKAGKIDGPAFVQVLCTCPT--GWRSPLEKGVEIARLAIETGIWPLFEIENGDIWN 258
Query: 228 QKITVPINKAKKMKP----EELEGKIVIGEFVDRD--------RPGLVREYKEYIKRAKK 275
KI P AK K +E K I E++ RP + E + +K K
Sbjct: 259 IKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFKHLFKRPEAIEELRNQVKAMWK 318
Query: 276 MMGWE 280
++G E
Sbjct: 319 VLGVE 323
>emb|CAC11768.1| (AL445064) probable 2-ketovalerate ferredoxin oxidoreductase beta-2
chain [Thermoplasma acidophilum]
Length = 300
Score = 77.3 bits (187), Expect = 2e-13
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 29/281 (10%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFAT 83
C GCG ++Y L+A+ + K V C + +PG + F L AT
Sbjct: 18 CHGCGATLAMRYVLKALGE------KTVVSVPASCWAVIPGAMPFRTLDVPMVYTPFAAT 71
Query: 84 GIKLAN----------PELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGM 133
G ++ + ++ F GDG A IG L A+ R +V I+ +N Y
Sbjct: 72 GASISGLREGLDIQGKSDYNVVGFAGDGGTADIGLQGLSGAMERGHNVFYIMYDNEGYMN 131
Query: 134 TGGQVAPTTPKGLRGTTAPYG-----QFENPFDIAQLAVAAGANYVARWTVFNYIQGINS 188
TG Q + +TP G R TT P G + EN +A + +A YVA TV I
Sbjct: 132 TGVQRSGSTPYGARTTTTPVGKERDFKKENKKIVADMMIAQNVPYVATATVAYPEDLIKK 191
Query: 189 IKKALSKEGFTLVEFLSPCPISFG-------RRNRMKTAPELIRWYQKITVPINKAKKMK 241
I+ A + G ++ L+PCP + +R+ + Y+ I K K
Sbjct: 192 IEHAKAVHGPKFIQILAPCPTGWYYPPEKTIEISRLAVQSRMFPLYEFIEGRFYLNKSFK 251
Query: 242 PEELEGKIVIGEFVDRDRPGLVREYKEYI-KRAKKMMGWEE 281
P ++ + + G + + Y+ +R +++ WE+
Sbjct: 252 PIDVSEYVKAQDRFKHLNEGEIENLRRYVEERWNQLLEWEK 292
>sp|O27880|IORA_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450335|pir||G69114 indolepyruvate oxidoreductase,
alpha subunit - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622988|gb|AAB86318.1| (AE000938)
indolepyruvate oxidoreductase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 618
Score = 75.7 bits (183), Expect = 6e-13
Identities = 56/195 (28%), Positives = 90/195 (45%), Gaps = 10/195 (5%)
Query: 20 PTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSR--VPGFVNFDGLHTTHGR 77
P CPGC +V RA D+L L D+I++ + IGC + P + D L + G
Sbjct: 368 PPSLCPGCPHRAVYYAVRRAADELELSGDEIIFPTDIGCYTLGIEPPYSAADYL-LSMGS 426
Query: 78 ALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQ 137
++ + G A + +I++F+GD G LI+A+ +++++N T MTGGQ
Sbjct: 427 SIGTSCGFSAATTQ-RIVSFIGDSTFFHAGIPPLINAVHNKQRFVLVVLDNRTTAMTGGQ 485
Query: 138 VAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEG 197
P P G AP I ++ A+G +V N + ++K+AL E
Sbjct: 486 PHPGLPVDGMGDEAP------EISIEEIVRASGVEFVETVNPMNIKRTSETVKRALEHES 539
Query: 198 FTLVEFLSPCPISFG 212
+V PC +S G
Sbjct: 540 VAVVISKYPCMLSSG 554
>pir||A71858 pyruvate ferrodoxin oxidoreductase - Helicobacter pylori (strain
J99) >gi|4155627|gb|AAD06617.1| (AE001531) Pyruvate
ferrodoxin oxidoreductase [Helicobacter pylori J99]
Length = 314
Score = 75.7 bits (183), Expect = 6e-13
Identities = 60/207 (28%), Positives = 90/207 (42%), Gaps = 27/207 (13%)
Query: 22 IFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGC---SSRVPGFVNFD--GLHTTHG 76
+ CPGCG G +++ L A+D IV + GC S V ++D +H
Sbjct: 23 LLCPGCGHGIIVREVLNAVDG------PIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFE 76
Query: 77 RALAFATGIKLANPEL-----------KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVIL 125
+G++ L K +AF GDG + IG + + R D+T I
Sbjct: 77 NGSTAISGVEAMYKALVNKGRYQGQRPKFVAFGGDGASYDIGFQFISGCMERGHDMTYIC 136
Query: 126 INNFTYGMTGGQVAPTTPKGLRGTTAP-----YGQFENPFDIAQLAVAAGANYVARWTVF 180
++N Y TGGQ + +TP G +T P +G+ E DI + + G YVA+ +
Sbjct: 137 LDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSPN 196
Query: 181 NYIQGINSIKKALSKEGFTLVEFLSPC 207
+ IK AL EG + LSPC
Sbjct: 197 KWKDMNKKIKTALDTEGPCFINALSPC 223
>pir||G64658 probable pyruvate synthase (EC 1.2.7.1) beta chain - Helicobacter
pylori (strain 26695) >gi|2314262|gb|AAD08155.1|
(AE000617) pyruvate ferredoxin oxidoreductase, beta
subunit [Helicobacter pylori 26695]
Length = 314
Score = 75.3 bits (182), Expect = 8e-13
Identities = 60/207 (28%), Positives = 90/207 (42%), Gaps = 27/207 (13%)
Query: 22 IFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGC---SSRVPGFVNFD--GLHTTHG 76
+ CPGCG G +++ L A+D IV + GC S V ++D +H
Sbjct: 23 LLCPGCGHGIIVREVLNAVDG------PIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFE 76
Query: 77 RALAFATGIKLANPEL-----------KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVIL 125
+G++ L K +AF GDG + IG + + R D+T I
Sbjct: 77 NGSTAISGVEAMYKALTNKGRYQGQKPKFVAFGGDGASYDIGLQFISGCMERGHDMTYIC 136
Query: 126 INNFTYGMTGGQVAPTTPKGLRGTTAP-----YGQFENPFDIAQLAVAAGANYVARWTVF 180
++N Y TGGQ + +TP G +T P +G+ E DI + + G YVA+ +
Sbjct: 137 LDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSPN 196
Query: 181 NYIQGINSIKKALSKEGFTLVEFLSPC 207
+ IK AL EG + LSPC
Sbjct: 197 KWKDMNKKIKTALDTEGPCFINALSPC 223
>gb|AAC02294.1| (AF013980) pyruvate:ferredoxin oxidoreductase beta subunit
[Helicobacter pylori]
Length = 314
Score = 75.3 bits (182), Expect = 8e-13
Identities = 60/207 (28%), Positives = 90/207 (42%), Gaps = 27/207 (13%)
Query: 22 IFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGC---SSRVPGFVNFD--GLHTTHG 76
+ CPGCG G +++ L A+D IV + GC S V ++D +H
Sbjct: 23 LLCPGCGHGIIVREVLNAVDG------PIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFE 76
Query: 77 RALAFATGIKLANPEL-----------KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVIL 125
+G++ L K +AF GDG + IG + + R D+T I
Sbjct: 77 NGSTAISGVEAMYKALVNKGRYQGQKPKFVAFGGDGASYDIGLQFISGCMERGHDMTYIC 136
Query: 126 INNFTYGMTGGQVAPTTPKGLRGTTAP-----YGQFENPFDIAQLAVAAGANYVARWTVF 180
++N Y TGGQ + +TP G +T P +G+ E DI + + G YVA+ +
Sbjct: 137 LDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSPN 196
Query: 181 NYIQGINSIKKALSKEGFTLVEFLSPC 207
+ IK AL EG + LSPC
Sbjct: 197 KWKDMNKKIKTALDTEGPCFINALSPC 223
>gb|AAC38207.1| (AF021092) PorB subunit of pyruvate:flavodoxin oxidoreductase
[Helicobacter pylori]
Length = 328
Score = 75.3 bits (182), Expect = 8e-13
Identities = 60/207 (28%), Positives = 90/207 (42%), Gaps = 27/207 (13%)
Query: 22 IFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGC---SSRVPGFVNFD--GLHTTHG 76
+ CPGCG G +++ L A+D IV + GC S V ++D +H
Sbjct: 23 LLCPGCGHGIIVREVLNAVDG------PIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFE 76
Query: 77 RALAFATGIKLANPEL-----------KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVIL 125
+G++ L K +AF GDG + IG + + R D+T I
Sbjct: 77 NGSTAISGVEAMYKALTNKGRYQGQKPKFVAFGGDGASYDIGLQFISGCMERGHDMTYIC 136
Query: 126 INNFTYGMTGGQVAPTTPKGLRGTTAP-----YGQFENPFDIAQLAVAAGANYVARWTVF 180
++N Y TGGQ + +TP G +T P +G+ E DI + + G YVA+ +
Sbjct: 137 LDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSPN 196
Query: 181 NYIQGINSIKKALSKEGFTLVEFLSPC 207
+ IK AL EG + LSPC
Sbjct: 197 KWKDMNKKIKTALDTEGPCFINALSPC 223
>pir||F75046 pyruvate synthase (EC 1.2.7.1) beta chain PAB1476 - Pyrococcus
abyssi (strain Orsay) >gi|5458780|emb|CAB50267.1|
(AJ248287) PYRUVATE SYNTHASE SUBUNIT PORB (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE BETA CHAIN) (POR) [Pyrococcus
abyssi]
Length = 334
Score = 73.7 bits (178), Expect = 2e-12
Identities = 80/305 (26%), Positives = 122/305 (39%), Gaps = 50/305 (16%)
Query: 24 CPGCGIGSVLQYTLRA----IDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG-----LHTT 74
C GCG + L+ +A +++ DP+ GC V + +H
Sbjct: 24 CAGCGCATALRLATKAFSEAMEEKYGDPNAFAIAQATGCMEVVSAVFPYTAWKVPWVHVA 83
Query: 75 HGRALAFATGIKLANPEL----KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
A A A+GI+ A + KI+A GDG A IG L + R +V ++ +N
Sbjct: 84 FENAAAAASGIEAAWKKKGIKGKILAIGGDGGTADIGLQALSGMLERGHNVVYLMYDNEA 143
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFD-----IAQLAVAAGANYVARWTVFNYIQG 185
Y TG Q + +TP G TT+P G++ D +A +A A YVA ++ N
Sbjct: 144 YMNTGIQRSSSTPYGAWTTTSPPGKYSIGEDRPKKWVALIAAAHMIPYVATASIGNPFDF 203
Query: 186 INSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIR------------------WY 227
+ +KKA +G V+ CP G R ++ E+ R W+
Sbjct: 204 VKKVKKAAKVDGPAFVQVHCTCPT--GWRTPLEKGIEIARLAIETGMWPLFEIENGDIWH 261
Query: 228 QKITVPINKAKKMKP----EELEGKIVIGEFVDRD--------RPGLVREYKEYIKRAKK 275
KI P AK K +E K I E++ RP + E + IK K
Sbjct: 262 IKIQPPGGGAKVYKEGGRVVRIEFKKPIEEYLKYQGRFKHLFKRPEAIDELRNQIKAMWK 321
Query: 276 MMGWE 280
++G E
Sbjct: 322 VLGVE 326
>pir||F71114 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3257093|dbj|BAA29776.1| (AP000003) 334aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 334
Score = 72.6 bits (175), Expect = 5e-12
Identities = 78/305 (25%), Positives = 120/305 (38%), Gaps = 50/305 (16%)
Query: 24 CPGCGIGSVLQYTLRA----IDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG-----LHTT 74
C GCG L+ +A +++ DP+ GC V + +H
Sbjct: 24 CAGCGCAIALKLATKAFSEAMEEKYGDPNAFAIAQATGCMEVVSAVFPYTAWKVPWIHVA 83
Query: 75 HGRALAFATGIKLANPEL----KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
A A A+G++ A +L KI+A GDG A IG L + R +V ++ +N
Sbjct: 84 FENAAAAASGVEAAWKKLGIKGKILAIGGDGGTADIGLQALSGMLERGHNVVYLMYDNEA 143
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFD-----IAQLAVAAGANYVARWTVFNYIQG 185
Y TG Q + +TP G TT+P G++ D +A +A A Y A ++ N
Sbjct: 144 YMNTGIQRSSSTPYGAWTTTSPPGKYSIGEDRPKKWVALIAAAHQIPYAATASIGNPFDL 203
Query: 186 INSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIR------------------WY 227
+ +KKA +G ++ CP G R ++ E+ R W
Sbjct: 204 VKKVKKAAKVDGPAFIQVHCTCPT--GWRTPLEKGVEIARLAIETGMWPLFEIENGDIWN 261
Query: 228 QKITVPINKAKKMKP----EELEGKIVIGEFVDRD--------RPGLVREYKEYIKRAKK 275
KI P AK K +E K I E++ RP + E + IK K
Sbjct: 262 IKIQPPGGGAKVYKEGGRVVRIEFKKPIEEYLKYQGRFKHLFKRPEAIEELRNQIKAMWK 321
Query: 276 MMGWE 280
++G E
Sbjct: 322 VLGVE 326
>sp|O58417|PORB_PYRHO PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
Length = 331
Score = 72.6 bits (175), Expect = 5e-12
Identities = 78/305 (25%), Positives = 120/305 (38%), Gaps = 50/305 (16%)
Query: 24 CPGCGIGSVLQYTLRA----IDDLGLDPDKIVWVSGIGCSSRVPGFVNFDG-----LHTT 74
C GCG L+ +A +++ DP+ GC V + +H
Sbjct: 21 CAGCGCAIALKLATKAFSEAMEEKYGDPNAFAIAQATGCMEVVSAVFPYTAWKVPWIHVA 80
Query: 75 HGRALAFATGIKLANPEL----KIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFT 130
A A A+G++ A +L KI+A GDG A IG L + R +V ++ +N
Sbjct: 81 FENAAAAASGVEAAWKKLGIKGKILAIGGDGGTADIGLQALSGMLERGHNVVYLMYDNEA 140
Query: 131 YGMTGGQVAPTTPKGLRGTTAPYGQFENPFD-----IAQLAVAAGANYVARWTVFNYIQG 185
Y TG Q + +TP G TT+P G++ D +A +A A Y A ++ N
Sbjct: 141 YMNTGIQRSSSTPYGAWTTTSPPGKYSIGEDRPKKWVALIAAAHQIPYAATASIGNPFDL 200
Query: 186 INSIKKALSKEGFTLVEFLSPCPISFGRRNRMKTAPELIR------------------WY 227
+ +KKA +G ++ CP G R ++ E+ R W
Sbjct: 201 VKKVKKAAKVDGPAFIQVHCTCPT--GWRTPLEKGVEIARLAIETGMWPLFEIENGDIWN 258
Query: 228 QKITVPINKAKKMKP----EELEGKIVIGEFVDRD--------RPGLVREYKEYIKRAKK 275
KI P AK K +E K I E++ RP + E + IK K
Sbjct: 259 IKIQPPGGGAKVYKEGGRVVRIEFKKPIEEYLKYQGRFKHLFKRPEAIEELRNQIKAMWK 318
Query: 276 MMGWE 280
++G E
Sbjct: 319 VLGVE 323
>sp|Q57714|PORB_METJA PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|2127891|pir||C64333 probable pyruvate synthase (EC
1.2.7.1) beta chain - Methanococcus jannaschii
>gi|1590994|gb|AAB98253.1| (U67482) pyruvate ferredoxin
oxidoreductase, subunit beta (porB) [Methanococcus
jannaschii]
Length = 298
Score = 69.1 bits (166), Expect = 6e-11
Identities = 64/217 (29%), Positives = 90/217 (40%), Gaps = 40/217 (18%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGC-----------SSRVPGFVNFDGLH 72
C GCG V + L+ D I+ + GC S RVP +H
Sbjct: 19 CAGCGAAIVARLLLKVAGK-----DTII-TNATGCLEVMTTPYPETSWRVPW------IH 66
Query: 73 TTHGRALAFATGI------------KLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD 120
T A A A+GI K A+ ++ +IA GDG A IG L A+ R D
Sbjct: 67 TAFENAAATASGIEAAVKALKRKRGKFADKKINVIAIGGDGGTADIGFQALSGAMERGHD 126
Query: 121 VTVILINNFTYGMTGGQVAPTTPKGLRGTTAP-----YGQFENPFDIAQLAVAAGANYVA 175
+ I+ +N Y TG Q + +TP TT+P G+ D+ + A G YVA
Sbjct: 127 ILYIMYDNEAYMNTGIQRSSSTPFMAATTTSPAGSKIRGEDRPKKDMTMIMAAHGIPYVA 186
Query: 176 RWTVFNYIQGINSIKKALSKEGFTLVEFLSPCPISFG 212
+ + +KKALS EG ++ L PC +G
Sbjct: 187 TACISYPEDFMRKVKKALSIEGPKFIQVLQPCTTGWG 223
>pir||C70400 ferredoxin oxidoreductase beta subunit - Aquifex aeolicus
>gi|2983630|gb|AAC07198.1| (AE000727) ferredoxin
oxidoreductase beta subunit [Aquifex aeolicus]
Length = 289
Score = 69.1 bits (166), Expect = 6e-11
Identities = 51/197 (25%), Positives = 88/197 (43%), Gaps = 13/197 (6%)
Query: 24 CPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALAFAT 83
C GC + Y +R +P+ + + GC+ ++ +G A A+
Sbjct: 51 CAGC----YMAYFIRVFYTALPNPEDTIVIGTAGCARLALSQAAVPFIYGNYGDTNAVAS 106
Query: 84 GIKLA------NPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQ 137
G+K A + ++ GDG IG +H+ R T I+++N YG TGGQ
Sbjct: 107 GLKRALSIRFPDKHKDVVVIAGDGGLIDIGFGMTMHSWFRREKFTTIMVDNEVYGNTGGQ 166
Query: 138 VAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKE- 196
+ +PKG++ AP G+ + + +LA AG YVAR + N + +I++A+
Sbjct: 167 ESGMSPKGVQLKMAPLGKKFDKINAVELAKTAGCVYVARISPTNPKRIAKTIRRAILAAR 226
Query: 197 --GFTLVEFLSPCPISF 211
G T + + C I +
Sbjct: 227 HFGPTFIHAYTSCNIEY 243
>gb|AAK41453.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin oxidoreductase
beta chain) (porB-1) [Sulfolobus solfataricus]
Length = 300
Score = 68.7 bits (165), Expect = 8e-11
Identities = 65/219 (29%), Positives = 92/219 (41%), Gaps = 24/219 (10%)
Query: 4 VSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQYTLRAIDDLGLDPDKIVWVSGIGCSSRVP 63
V + ++ K + K CPGC I L L + + K V V C++ +
Sbjct: 3 VLSSQVTPKRMPKFYRGNAACPGCPIPKELDVALEVLGN------KTVLVVPASCTTIIM 56
Query: 64 GFVN-----FDGLHTTHGRALAFATGI----KLANPELKIIA-FMGDGDAAAIGGNHLIH 113
G N +H+ G A A +GI ++ I+A + GDG IG +
Sbjct: 57 GDTNGMPSTVPVVHSAFGAAAAIGSGIVRSLRMRGDNDAIVAVWAGDGSTGDIGFAAVSG 116
Query: 114 AIRRNLDVTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFE----NPFDIAQLAVAA 169
A RN D+ I +N Y TG Q + TPKG TT P G+ E PF IA+ V
Sbjct: 117 AAERNEDILYICYDNEAYMNTGIQRSGLTPKGAWTTTTPEGKREVKKPLPFIIAEHKVP- 175
Query: 170 GANYVARWTVFNYIQGINSIKKALSKEGFTLVEFLSPCP 208
YVA ++ ++KA GF + LSPCP
Sbjct: 176 ---YVATASIAYIYDYEAKMRKAKQIRGFRYIHLLSPCP 211
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.141 0.430
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112866310
Number of Sequences: 2977
Number of extensions: 4959766
Number of successful extensions: 10212
Number of sequences better than 1.0e-10: 47
Number of HSP's better than 0.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 10143
Number of HSP's gapped (non-prelim): 47
length of query: 281
length of database: 189,106,746
effective HSP length: 51
effective length of query: 230
effective length of database: 158,583,909
effective search space: 36474299070
effective search space used: 36474299070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)