BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0350 (PAB0350) DE:ABC TRANSPORTER ATP-BINDING PROTEIN
(260 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyroco... 508 e-143
pir||E71045 probable ABC transporter - Pyrococcus horikoshii >gi... 423 e-117
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 152 5e-36
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 149 3e-35
gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus ... 149 4e-35
pir||F71561 probable rRNA methylase - Chlamydia trachomatis (ser... 147 1e-34
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 146 2e-34
pir||B72089 ABC transporter, ATP-binding protein CP0412 [importe... 146 2e-34
gb|AAC35949.1| (AF077010) ABC transporter ATPase TroB [Chlamydia... 145 4e-34
pir||S61910 hypothetical protein 5 - Streptococcus parasanguis >... 145 7e-34
pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB -... 144 1e-33
dbj|BAB05108.1| (AP001511) ABC transporter (ATP-binding protein)... 144 1e-33
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphy... 143 2e-33
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 142 3e-33
gi|11498042 iron (III) ABC transporter, ATP-binding protein (hem... 142 3e-33
pir||G81714 ABC transporter, ATP-binding protein TC0339 [importe... 142 5e-33
pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AA... 141 8e-33
sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 140 1e-32
emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococ... 139 2e-32
pir||A71357 probable ABC transporter, ATP-binding protein (troB)... 139 3e-32
sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 139 4e-32
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 138 7e-32
sp|Q57399|YE70_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 138 9e-32
pir||A64409 ferric enterobactin transport ATP-binding protein ho... 138 9e-32
pir||T45470 ATP-binding ABC transport protein [imported] - Erysi... 138 9e-32
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 136 2e-31
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 136 3e-31
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 136 3e-31
pir||D69180 ABC transporter - Methanobacterium thermoautotrophic... 136 3e-31
pir||H75293 probable manganese ABC transporter, ATP-binding prot... 135 5e-31
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 135 6e-31
pir||B75207 multiple sugar-binding transport ATP-binding protein... 135 6e-31
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 134 8e-31
pir||D72415 zinc ABC transporter, ATP-binding protein - Thermoto... 134 1e-30
dbj|BAB05113.1| (AP001511) ABC transporter (ATP-binding protein)... 134 1e-30
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 134 1e-30
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 134 1e-30
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 134 1e-30
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 134 1e-30
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 134 1e-30
gi|11498996 iron (III) ABC transporter, ATP-binding protein (hem... 134 1e-30
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 133 2e-30
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 132 3e-30
pir||S75197 ABC-type transport protein slr2044 - Synechocystis s... 132 4e-30
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 132 4e-30
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 132 5e-30
sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BINDING P... 131 7e-30
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 131 7e-30
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 131 9e-30
pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 ... 131 1e-29
pir||E71067 probable ferrichrome transport ATP-binding protein -... 130 2e-29
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 130 2e-29
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 130 2e-29
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 130 2e-29
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop... 130 2e-29
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 129 3e-29
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 129 3e-29
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 129 3e-29
gb|AAD09976.1| (AF055088) ATP-binding cassette; PsaB [Streptococ... 129 4e-29
pir||G72750 probable ABC transporter ATP-binding protein APE0532... 129 4e-29
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 128 6e-29
pir||T46652 ABC transporter ZurA [imported] - Listeria monocytog... 127 1e-28
pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879... 127 1e-28
pir||C71645 ferric transport ATP-binding protein (afuC) RP834 - ... 127 2e-28
sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 127 2e-28
sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 126 2e-28
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 126 2e-28
gb|AAK43187.1| ABC transporter, ATP binding protein, putative [S... 126 3e-28
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 125 4e-28
gi|11498429 branched-chain amino acid ABC transporter, ATP-bindi... 125 4e-28
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 125 4e-28
pir||C71220 probable sugar-binding transport ATP-binding protein... 125 4e-28
gb|AAD56937.1|AF180520_2 (AF180520) ATP-binding protein MtsB [St... 125 4e-28
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 125 4e-28
pir||D75609 amino acid ABC transporter, ATP-binding protein - De... 125 4e-28
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 125 5e-28
gi|7524830 sulfate transport system permease protein [Chlorella ... 125 7e-28
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 125 7e-28
gi|10954682 probable mikimopine transporter gene~similar to potA... 125 7e-28
pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC... 124 9e-28
gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus] 124 9e-28
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 124 9e-28
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 124 9e-28
gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [S... 124 9e-28
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 124 9e-28
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 124 9e-28
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 124 1e-27
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 123 1e-27
gi|11467821 probable transport protein [Nephroselmis olivacea] >... 123 1e-27
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 123 2e-27
dbj|BAB05306.1| (AP001512) iron(III) dicitrate transport system ... 123 2e-27
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 123 2e-27
sp|Q57243|YC72_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 123 3e-27
pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [... 123 3e-27
pir||E82120 zinc ABC transporter, ATP-binding protein VC2082 [im... 123 3e-27
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 122 3e-27
pir||E69812 ferrichrome ABC transporter (ATP-binding p) homolog ... 122 3e-27
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 122 3e-27
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 122 3e-27
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 122 6e-27
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 122 6e-27
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 121 7e-27
gi|11466425 probable transport protein [Mesostigma viride] >gi|7... 121 7e-27
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 121 1e-26
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 121 1e-26
emb|CAB93444.1| (AL357591) putative ABC transporter ATP-binding ... 121 1e-26
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 120 1e-26
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 120 1e-26
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 120 2e-26
sp|Q55281|MNTA_SYNY3 MANGANESE TRANSPORT SYSTEM ATP-BINDING PROT... 120 2e-26
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 120 2e-26
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 120 2e-26
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 120 2e-26
gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1] 120 2e-26
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 119 3e-26
pir||C75369 amino acid ABC transporter, ATP-binding protein - De... 119 3e-26
pir||F81348 ABC transport system ATP-binding protein Cj0774c [im... 119 3e-26
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 119 3e-26
gi|11467416 putative protein of 244 amino acids [Cyanophora para... 119 4e-26
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 119 4e-26
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 119 4e-26
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 119 4e-26
gi|11497707 nitrate ABC transporter, ATP-binding protein (nrtC-1... 118 5e-26
pir||G72406 hypothetical protein TM0191 - Thermotoga maritima (s... 118 5e-26
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 118 6e-26
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 118 6e-26
gb|AAG20909.1| (AE005157) ABC transporter, ATP-binding protein; ... 118 6e-26
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 118 9e-26
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 118 9e-26
gb|AAF81672.1|AF232688_1 (AF232688) SloA [Streptococcus mutans] 118 9e-26
pir||E81936 probable amino acid permease ATP-binding protein NMA... 117 1e-25
emb|CAB92552.1| (AJ275980) FecE protein [Serratia sp. ATCC39006] 117 1e-25
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 117 1e-25
gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein ... 117 1e-25
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 117 1e-25
emb|CAB65561.1| (AL136058) probable amino acid ABC transporter p... 117 1e-25
emb|CAC02745.1| (AL390114) probable sulfate transport ATP-bindin... 117 1e-25
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 116 2e-25
gb|AAC68697.1| (AF097414) EfmC [Enterococcus faecium] 116 2e-25
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 116 2e-25
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 116 2e-25
pir||E82959 zinc transport protein ZnuC PA5500 [imported] - Pseu... 116 2e-25
gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, A... 116 2e-25
emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyo... 116 3e-25
pir||D69763 ferrichrome ABC transporter (ATP-binding p) homolog ... 116 3e-25
pir||A69095 cobalt transport ATP-binding protein O - Methanobact... 116 3e-25
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 116 3e-25
pir||G72687 probable high-affinity branched-chain amino acid tra... 116 3e-25
pir||F81363 probable glutamine transport ATP-binding protein Cj0... 116 3e-25
pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0... 116 3e-25
dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacill... 116 3e-25
dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system... 116 3e-25
gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus p... 116 3e-25
sp|P52648|ZNUC_ECOLI HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDIN... 116 3e-25
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 116 3e-25
pir||B83282 probable ATP-binding component of ABC transporter PA... 116 3e-25
sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 115 4e-25
sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 115 4e-25
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 115 4e-25
dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein)... 115 4e-25
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 115 6e-25
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 115 6e-25
gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport syst... 115 6e-25
gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus ... 115 7e-25
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 115 7e-25
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 115 7e-25
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 115 7e-25
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 115 7e-25
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 115 7e-25
pir||H70432 ABC transporter - Aquifex aeolicus >gi|2983897|gb|AA... 114 1e-24
pir||E83478 probable ATP-binding component of ABC transporter PA... 114 1e-24
dbj|BAB04800.1| (AP001510) ferrichrome ABC transporter (ATP-bind... 114 1e-24
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 114 1e-24
gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, comp... 114 1e-24
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 114 1e-24
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 114 1e-24
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My... 113 2e-24
gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sul... 113 2e-24
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 113 2e-24
sp|P45031|YRBF_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 113 2e-24
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 113 2e-24
pir||B71128 probable iron (III) dicitrate transport ATP-binding ... 113 2e-24
pir||H72704 probable iron (III) dicitrate transport ATP-binding ... 113 2e-24
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu... 113 2e-24
sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA... 113 2e-24
pir||S77405 hypothetical protein - Synechocystis sp. (strain PCC... 113 3e-24
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 113 3e-24
gb|AAC46148.1| (U50597) YfeB [Yersinia pestis] 113 3e-24
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 113 3e-24
pir||C75255 iron ABC transporter, ATP-binding protein - Deinococ... 113 3e-24
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 113 3e-24
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 113 3e-24
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 112 4e-24
pir||H72275 phosphate ABC transporter, ATP-binding protein - The... 112 4e-24
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 112 4e-24
pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealy... 112 4e-24
pir||S76632 hypothetical protein - Synechocystis sp. (strain PCC... 112 5e-24
pir||S74440 iron(III) dicitrate transport system permease protei... 112 5e-24
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 112 5e-24
emb|CAB69727.1| (AL137166) putative metal transport ABC transpor... 112 5e-24
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 112 5e-24
emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coe... 112 5e-24
gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis] 112 5e-24
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 111 6e-24
pir||F71849 amino acid ABC transporter, ATP-binding protein - He... 111 6e-24
pir||T36000 probable ABC-type transport system ATP-binding chain... 111 6e-24
pir||T35757 probable branched chain amino acid transport ATP-bin... 111 6e-24
gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter... 111 6e-24
pir||B45917 nucleotide-binding protein proV - Salmonella typhimu... 111 8e-24
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 111 8e-24
pir||G81923 probable ABC-transporter ATP-binding protein NMA0791... 111 8e-24
emb|CAC14366.1| (AL445963) Fe uptake system permease [Streptomyc... 111 8e-24
gb|AAB01532.1| (U38418) ProV [Bacillus subtilis] 111 1e-23
gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stu... 111 1e-23
gi|10957420 iron ABC transporter, ATP-binding protein [Deinococc... 111 1e-23
pir||F81257 probable hemein uptake system ATP-binding protein Cj... 111 1e-23
pir||A81180 ABC transporter, ATP-binding protein NMB0588 [import... 111 1e-23
gb|AAD33527.2|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]... 111 1e-23
sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 110 1e-23
sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|100191... 110 1e-23
sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ... 110 1e-23
pir||C64666 glutamine transport protein glnQ - Helicobacter pylo... 110 1e-23
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 110 1e-23
emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lac... 110 1e-23
pir||B83225 ATP-binding component of ABC phosphonate transporter... 110 1e-23
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 110 2e-23
pir||F72421 iron(III) ABC transporter, ATP-binding protein - The... 110 2e-23
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 110 2e-23
pir||E72605 probable high-affinity branched-chain amino acid tra... 110 2e-23
pir||JN0849 hypothetical 35K protein - Streptomyces lividans >gi... 109 2e-23
pir||D35718 phnC protein - Escherichia coli >gi|147196|gb|AAA243... 109 2e-23
sp|P44692|ZNUC_HAEIN HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDIN... 109 2e-23
pir||C82485 iron(III) ABC transporter, ATP-binding protein VCA02... 109 2e-23
pir||B83294 probable ATP-binding component of ABC transporter PA... 109 2e-23
sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 109 3e-23
sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN ... 109 3e-23
sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 109 3e-23
pir||F83058 probable ATP-binding component of ABC transporter PA... 109 3e-23
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 109 3e-23
emb|CAB56736.1| (AL121600) ABC transport protein, ATP-binding su... 109 3e-23
pir||A82421 arginine ABC transporter, ATP-binding protein VCA076... 109 3e-23
gb|AAG20232.1| (AE005098) phosphonates transport ATP-binding; Ph... 109 3e-23
sp|P72477|ABCX_STRMU PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 109 4e-23
sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|218242... 109 4e-23
pir||G72290 branched chain amino acid ABC transporter, ATP-bindi... 109 4e-23
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 109 4e-23
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 108 6e-23
pir||E70943 probable ABC-type sugar transport protein - Mycobact... 108 6e-23
sp|Q9ZKW3|Y888_HELPJ PROBABLE IRON CHELATIN TRANSPORT ATP-BINDIN... 108 6e-23
pir||T36888 probable iron-siderophore uptake system ATP-binding ... 108 6e-23
pir||B82891 ferrichrome transport ATP-binding protein UU435 [imp... 108 6e-23
emb|CAB88481.1| (AL353816) putative ABC transport system ATP-bin... 108 6e-23
pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AA... 108 7e-23
sp|Q9WYI7|Y352_THEMA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 108 7e-23
emb|CAB57615.1| (Y18930) ABC transporter/ATP-binding protein [Su... 108 7e-23
emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [... 108 7e-23
gb|AAF77616.1|AF151721_2 (AF151721) oligopeptide permease subuni... 108 7e-23
gb|AAK40988.1| ABC transporter, ATP binding protein. [Sulfolobus... 108 7e-23
sp|O05732|Y888_HELPY PROBABLE IRON CHELATIN TRANSPORT ATP-BINDIN... 108 7e-23
gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-bindin... 108 1e-22
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING P... 108 1e-22
sp|P39456|YCKI_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 108 1e-22
pir||G81279 enterochelin uptake ATP-binding protein Cj1354 [impo... 108 1e-22
dbj|BAB06693.1| (AP001517) alkylphosphonate ABC tranporter (ATP-... 108 1e-22
pir||S16298 ferric enterobactin transport protein fepC - Escheri... 107 2e-22
sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 107 2e-22
pir||I40452 ABC-type transport system probable ATP binding subun... 107 2e-22
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 107 2e-22
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 107 2e-22
gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica] 107 2e-22
pir||B36931 hypothetical protein (sfp0 5' region) - Bacillus sub... 106 2e-22
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 106 2e-22
gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. al... 106 2e-22
pir||E72493 probable ribose ABC transport system ATP-binding pro... 106 2e-22
emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding ... 106 2e-22
emb|CAB76301.1| (AL158057) putative ABC-transport protein, ATP-b... 106 2e-22
gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding ... 106 3e-22
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 106 4e-22
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ... 106 4e-22
pir||G75142 abc transporter, ATP-binding protein PAB2147 - Pyroc... 106 4e-22
emb|CAB76322.1| (AL158060) putative ABC transport protein, ATP-b... 106 4e-22
pir||G83159 probable ATP-binding component of ABC transporter PA... 106 4e-22
gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF... 105 5e-22
gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis] 105 5e-22
pir||A72284 oligopeptide ABC transporter, ATP-binding protein - ... 105 6e-22
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc... 105 6e-22
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 104 8e-22
sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TR... 104 8e-22
pir||A64703 ABC transporter, ATP-binding protein - Helicobacter ... 104 8e-22
pir||D82281 ferric vibriobactin ABC transporter, ATP-binding pro... 104 8e-22
gb|AAG09260.1| (AF176664) EppD [EDTA-degrading bacterium BNC1] 104 8e-22
emb|CAA06499.1| (AJ005352) ATP binding protein [Staphylococcus a... 104 1e-21
pir||F72405 ABC transporter, ATP-binding protein - Thermotoga ma... 104 1e-21
gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other ... 104 1e-21
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 104 1e-21
gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein ho... 103 2e-21
pir||F71163 probable oligopeptide transport ATP-binding protein ... 103 2e-21
gb|AAD53162.1|AF176824_5 (AF176824) ATP-binding protein of ABC t... 103 2e-21
pir||E71130 probable oligopeptide transport ATP-binding protein ... 103 2e-21
pir||A72688 probable high-affinity branched-chain amino acid tra... 103 2e-21
gb|AAD45713.1|AF160811_1 (AF160811) L-arabinose transport, ATP b... 103 2e-21
dbj|BAB04746.1| (AP001510) ferrichrome ABC transporter (ATP-bind... 103 2e-21
sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|... 102 3e-21
emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli] 102 3e-21
pir||D72371 oligopeptide ABC transporter, ATP-binding protein - ... 102 3e-21
pir||H72342 ABC transporter, ATP-binding protein - Thermotoga ma... 102 3e-21
gi|10954675 probable mikimopine-lactam transporter gene~similar ... 102 3e-21
pir||H71817 probable amino acid ABC transporter, ATP-binding pro... 102 4e-21
gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter A... 102 4e-21
gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus ... 102 5e-21
pir||T44662 nosF protein [imported] - Bradyrhizobium japonicum >... 102 5e-21
gb|AAD37495.1|AF109162_3 (AF109162) HmuV [Corynebacterium diphth... 102 5e-21
pir||T50583 ABC-type transport protein, ATP-binding component [i... 101 7e-21
pir||B83389 probable ATP-binding component of ABC transporter PA... 101 7e-21
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 101 9e-21
sp|P33360|YEHX_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 101 9e-21
sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 101 9e-21
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 101 9e-21
gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874... 101 1e-20
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 101 1e-20
pir||T03543 probable cobalt transport system ATP-binding protein... 101 1e-20
dbj|BAB05989.1| (AP001515) ABC transporter (ATP-binding protein)... 101 1e-20
sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 100 2e-20
sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 100 2e-20
pir||T44412 ABC transporter (ATP-binding protein) homolog ybxA [... 100 2e-20
pir||S74879 phosphate transport ATP-binding protein pstB-3 - Syn... 100 2e-20
gb|AAB48547.1| (U50749) unknown [Leuconostoc mesenteroides subsp... 100 2e-20
sp|O06784|MKL_MYCTU POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDIN... 100 2e-20
sp|P45393|YRBF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 99 4e-20
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 99 4e-20
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 99 5e-20
gb|AAC71706.1| (AF061070) PtxA [Pseudomonas stutzeri] 99 5e-20
gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocy... 99 5e-20
gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans] 99 5e-20
sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN... 99 6e-20
sp|P30769|MKL_MYCLE POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDIN... 98 8e-20
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 98 8e-20
sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 98 8e-20
pir||G71192 probable cobalt transport ATP-binding protein - Pyro... 98 8e-20
emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans] 98 8e-20
sp|Q08381|MODC_RHOCA MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 98 1e-19
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 98 1e-19
pir||T03482 iron(iii) dicitrate transport ATP-binding protein - ... 98 1e-19
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 98 1e-19
gi|11498005 ABC transporter, ATP-binding protein [Archaeoglobus ... 97 2e-19
pir||E75444 branched-chain amino acid ABC transporter, ATP-bindi... 97 2e-19
dbj|BAB07011.1| (AP001518) ferrichrome ABC transporter (ATP-bind... 97 2e-19
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 97 2e-19
pir||A75554 ABC transporter, ATP-binding protein, MsbA family - ... 97 2e-19
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 97 2e-19
pir||H71892 osmoprotection ATP-binding protein - Helicobacter py... 96 3e-19
gi|11498563 branched-chain amino acid ABC transporter, ATP-bindi... 96 4e-19
pir||F81929 probable iron-uptake permease ATP-binding protein NM... 96 4e-19
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 96 4e-19
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 96 5e-19
gb|AAD21772.1| (J05278) ChrD [Ralstonia metallidurans] 96 5e-19
pir||C64622 osmoprotection protein - Helicobacter pylori (strain... 95 7e-19
gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (d... 95 9e-19
sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 95 9e-19
pir||D70984 probable drrA protein - Mycobacterium tuberculosis (... 95 9e-19
pir||T36413 probable ABC-type iron-siderophore transport system ... 95 9e-19
emb|CAB88472.1| (AL353816) phosphate ABC transport system ATP-bi... 95 9e-19
sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP... 94 1e-18
dbj|BAB07610.1| (AP001520) ABC transporter (ATP-binding protein)... 94 1e-18
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 94 2e-18
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 94 2e-18
pir||G75202 dipeptide abc transporter, dipeptide-binding protein... 94 2e-18
sp|P37388|XYLG_ECOLI D-XYLOSE TRANSPORT ATP-BINDING PROTEIN XYLG... 93 3e-18
pir||F36889 leuD 3'-region hypothetical protein - Lactococcus la... 93 3e-18
emb|CAA88940.2| (Z49126) contains similarity to Pfam domain: PF0... 93 3e-18
pir||T20386 hypothetical protein DH11.3 - Caenorhabditis elegans 93 3e-18
sp|Q02151|YLUD_LACLA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 93 4e-18
sp|P50980|OPPD_LACLC OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 93 4e-18
pir||B70327 ABC transporter - Aquifex aeolicus >gi|2982983|gb|AA... 93 4e-18
pir||F72617 probable dipeptide transport system ATP-binding prot... 93 4e-18
gb|AAG20587.1| (AE005129) dipeptide ABC transporter ATP-binding;... 93 4e-18
sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 92 8e-18
pir||C72300 oligopeptide ABC transporter, ATP-binding protein - ... 92 8e-18
gi|11498955 phosphate ABC transporter, ATP-binding protein (pstB... 91 1e-17
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF ... 91 1e-17
pir||F71545 probable oligopeptide transport ATPase - Chlamydia t... 91 1e-17
pir||E72598 probable ABC-transporter ATP-binding protein APE1253... 91 1e-17
sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 90 2e-17
gb|AAF28101.1|AF148682_1 (AF148682) oligopeptide permease F prot... 90 2e-17
pir||D83281 histidine transport protein HisP PA2926 [imported] -... 90 2e-17
sp|P45321|MODC_HAEIN MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 90 2e-17
dbj|BAA21795.1| (AB000100) malK-like protein [Synechococcus sp.] 90 3e-17
emb|CAC01582.1| (AL391041) putative branched amino acid transpor... 90 3e-17
gb|AAK40808.1| Iron (III) ABC transporter, ATP-binding protein [... 89 4e-17
pir||T35675 probable ABC-transport system ATP binding protein - ... 89 4e-17
pir||H72107 peptide ABC transporter, ATP-binding protein CP0565 ... 89 4e-17
pir||C72424 oligopeptide ABC transporter, ATP-binding protein - ... 89 4e-17
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 89 4e-17
pir||A82876 oligopeptide transport system permease protein UU560... 89 7e-17
pir||F75377 ABC transporter, ATP-binding protein - Deinococcus r... 88 9e-17
sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 88 1e-16
pir||D70009 probable ABC transporter yufO - Bacillus subtilis >g... 87 2e-16
emb|CAA07699.1| (AJ007827) eprD protein [Pseudomonas tolaasii] 87 2e-16
pir||G82698 ABC transporter ATP-binding protein XF1302 [imported... 87 2e-16
gb|AAA64722.1| (M20568) ORF 10 [Azotobacter vinelandii] 87 2e-16
pir||T36523 probable ABC-type transport system ATP-binding prote... 87 2e-16
gb|AAB58738.1| (AF001333) ATP-binding protein [Synechococcus PCC... 87 3e-16
pir||B72300 oligopeptide ABC transporter, ATP-binding protein - ... 87 3e-16
gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus ... 86 4e-16
pir||C65145 nikE protein - Escherichia coli >gi|466616|gb|AAB184... 86 4e-16
pir||C83126 ferric enterobactin transport protein FepC PA4158 [i... 86 4e-16
sp|P33594|NIKE_ECOLI NICKEL TRANSPORT ATP-BINDING PROTEIN NIKE >... 86 5e-16
pir||F64204 spermidine/putrescine transport ATP-binding protein ... 86 5e-16
sp|P47288|POTA_MYCGE SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 86 5e-16
gb|AAC69840.1| (AF076683) oligopeptide transporter putative ATPa... 85 6e-16
gb|AAD37310.1|AF135170_1 (AF135170) ribose ABC transporter [Yers... 85 6e-16
pir||H82224 probable vitamin B12 ABC transporter, ATP-binding pr... 85 6e-16
sp|P36638|SAPF_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 85 8e-16
pir||T03558 ribose transport ATP-binding protein - Rhodobacter c... 85 8e-16
pir||G72418 sugar ABC transporter, ATP-binding protein - Thermot... 85 8e-16
gb|AAD43626.1|AF071411_1 (AF071411) multidrug resistance protein... 85 8e-16
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 84 1e-15
gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [H... 81 2e-14
pir||T34038 hypothetical protein F43E2.4 - Caenorhabditis elegan... 80 2e-14
gb|AAG10628.1|AC022521_6 (AC022521) Putative ABC transporter [Ar... 80 2e-14
pir||D69159 methyl coenzyme M reductase system, component A2 hom... 80 3e-14
gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum] 79 5e-14
pir||T26313 hypothetical protein W09D6.6 - Caenorhabditis elegan... 78 1e-13
dbj|BAB10822.1| (AB019223) multidrug resistance p-glycoprotein [... 78 1e-13
gb|AAF51131.1| (AE003580) CG9664 gene product [Drosophila melano... 76 3e-13
pir||B82231 transport ATP-binding protein CydD VC1181 [imported]... 76 3e-13
gb|AAG10627.1|AC022521_5 (AC022521) Putative ABC transporter [Ar... 75 7e-13
emb|CAA73292.1| (Y12758) ABC transporter [Rhizobium leguminosarum] 74 2e-12
gb|AAB57756.1| (U44387) unknown [Rhizobium leguminosarum bv. tri... 73 4e-12
pir||E75120 hypothetical protein PAB1855 - Pyrococcus abyssi (st... 73 4e-12
pir||T14805 hypothetical protein F15J5.20 - Arabidopsis thaliana... 73 4e-12
emb|CAB78807.1| (AL161547) multidrug resistance protein/P-glycop... 73 4e-12
sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 71 1e-11
pir||T35245 probable ABC transporter - Streptomyces coelicolor >... 71 1e-11
emb|CAB62765.1| (AL133424) putative ABC transporter ATP-binding ... 69 4e-11
dbj|BAA96297.1| (AB035547) VarM [Streptomyces virginiae] 69 7e-11
gi|10954721 hypothetical ABC-transporter gene~similar to teuA ge... 69 7e-11
sp|O52618|NODI_RHIME NODULATION ATP-BINDING PROTEIN I >gi|280954... 68 9e-11
>pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyrococcus abyssi
(strain Orsay) >gi|5457948|emb|CAB49438.1| (AJ248284)
ABC TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 260
Score = 508 bits (1293), Expect = e-143
Identities = 260/260 (100%), Positives = 260/260 (100%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK
Sbjct: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL
Sbjct: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST
Sbjct: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASK 240
LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASK
Sbjct: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASK 240
Query: 241 AVRVGERLYCIIGDVHFRVR 260
AVRVGERLYCIIGDVHFRVR
Sbjct: 241 AVRVGERLYCIIGDVHFRVR 260
>pir||E71045 probable ABC transporter - Pyrococcus horikoshii
>gi|3258082|dbj|BAA30765.1| (AP000006) 260aa long
hypothetical ABC transporter [Pyrococcus horikoshii]
Length = 260
Score = 423 bits (1075), Expect = e-117
Identities = 204/260 (78%), Positives = 240/260 (91%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
MEYVIEA++LTIMY+ V AVE LTFKLK+GETLLLLGPNGAGKTTLLRVLAG HT Y+G
Sbjct: 1 MEYVIEAKDLTIMYNGVNAVEDLTFKLKRGETLLLLGPNGAGKTTLLRVLAGFHTEYKGY 60
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
+ VFGKSP EV+++VAYVPQTFS+N RVPLSVLDVV+MG +YK+G++HFN+P+EVIK+G+
Sbjct: 61 LKVFGKSPLEVKDRVAYVPQTFSINSRVPLSVLDVVAMGAIYKRGIVHFNVPREVIKKGI 120
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
++L+FLGLK+++ +SFRELSGGQKQRVIIARALMS PELLLLDEPLSALDPKAR+E TS
Sbjct: 121 KVLEFLGLKDLSSRSFRELSGGQKQRVIIARALMSEPELLLLDEPLSALDPKARLEVTSV 180
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASK 240
LS+IKE GI+MIITTHD+NPL EIGDKVMLI++KLVAFG+P+EVLRDEIIGKVYGPASK
Sbjct: 181 LSRIKEKFGISMIITTHDINPLAEIGDKVMLINKKLVAFGTPDEVLRDEIIGKVYGPASK 240
Query: 241 AVRVGERLYCIIGDVHFRVR 260
VRVG++LYCIIGDVH VR
Sbjct: 241 TVRVGKKLYCIIGDVHLMVR 260
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 152 bits (379), Expect = 5e-36
Identities = 97/261 (37%), Positives = 147/261 (56%), Gaps = 22/261 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
ME +I ENL + +AV+G++F +KKGE LGPNGAGKTT + +L L GK
Sbjct: 1 MEDIIVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGK 60
Query: 61 ILVFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
V G K P EVR K+ V Q SL+ ++ + +Y G I+ +++
Sbjct: 61 AWVAGHDVLKEPREVRRKIGIVFQDQSLD-------RELTAYENMYIHGKIYGYGGEKLK 113
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
KR LE+L+F+ L E K + SGG +R+ IAR+L+ PE+L LDEP LDP R
Sbjct: 114 KRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAH 173
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGK-- 233
+SK+K++ +T+ +TTH ++ ++ D+V +ID K++A G+P E+ R ++GK
Sbjct: 174 MWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKR--MVGKEI 231
Query: 234 VYGPASKAVRVGERLYCIIGD 254
+Y VR E + C+ GD
Sbjct: 232 IY------VRFSEAVECLEGD 246
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 149 bits (373), Expect = 3e-35
Identities = 86/230 (37%), Positives = 135/230 (58%), Gaps = 11/230 (4%)
Query: 4 VIEAENLTIMYDSV--KAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
++E +NL+ YD+ K ++ + K+KK E + LLGP+G GKTTL+++L G + G+I
Sbjct: 5 ILEIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEI 64
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
F K S+ + F P ++V D +S G KK P+++IK +
Sbjct: 65 YFFSKEISKTSPNKREINTVFQNYALFPHMNVFDNISFGLRMKK------TPKDIIKEKV 118
Query: 121 EI-LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+ L +G+ + A ++ ELSGGQKQRV IARA++ P+LLLLDEPLSALD K R E
Sbjct: 119 KTSLSLIGMPKYAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQK 178
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEVLRD 228
L KI+ +GIT I THD + + D++++++ ++ G+PEE+ +
Sbjct: 179 ELKKIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEIYNE 228
>gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445711|pir||E69497 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648557|gb|AAB89272.1| (AE000966) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 253
Score = 149 bits (372), Expect = 4e-35
Identities = 89/258 (34%), Positives = 149/258 (57%), Gaps = 13/258 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VIE +++ Y+S + + L + +GE + +LGPNGAGK+T+LR++ GL +G + V
Sbjct: 3 VIEFYDVSFSYNSSEVLSDLNLGIGRGEFVAVLGPNGAGKSTMLRLILGLLKPTKGTVKV 62
Query: 64 FGKSPSEVREK----VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
G + + R+K V Y+PQ + PL+V V+ + L + + + +E
Sbjct: 63 LGYNAFDERDKFVGRVGYLPQREEILLEAPLTVSQVIKLPLLARGKKVGDSKLREA---- 118
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
L +GL K F ELSGGQ+Q+V++ARAL+S+PE+LLLDEP + +D ++ +
Sbjct: 119 ---LSMVGLDGFGDKLFSELSGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQEKIVE 175
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPAS 239
L+++ G T++ H++NPL+ D+V+L++R+++A G P EV +E I K YG +
Sbjct: 176 VLAEM-SSKGKTVVAVVHNINPLLHNIDRVVLLNRRIIAAGKPNEVFSEENIIKAYGTSI 234
Query: 240 KAVRVGERL-YCIIGDVH 256
V E + + GD H
Sbjct: 235 PIVICEEGFTHPLYGDYH 252
>pir||F71561 probable rRNA methylase - Chlamydia trachomatis (serotype D, strain
UW3/Cx) >gi|3328462|gb|AAC67659.1| (AE001281) rRNA
methylase [Chlamydia trachomatis]
Length = 259
Score = 147 bits (367), Expect = 1e-34
Identities = 84/229 (36%), Positives = 137/229 (59%), Gaps = 2/229 (0%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
E+L + YD + +TF L G ++GPNGAGK+TLL+ GL G+ L FG+
Sbjct: 12 EDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQR 71
Query: 68 PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLG 127
S+V ++AY+PQ S+++ P++VLD+V MG KG+ + I + + + IL+ +G
Sbjct: 72 FSKVHHRIAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWN-RISTDDRQEAMRILERVG 130
Query: 128 LKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKED 187
L+ A + +LSGGQ+QR +AR+LM +L L+DE SA+D + L ++K +
Sbjct: 131 LEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQELKSE 190
Query: 188 MGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
G T+++ HD++ + ++ D V+L+++ LV GS EE L E I + YG
Sbjct: 191 -GKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQAYG 238
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 146 bits (366), Expect = 2e-34
Identities = 84/225 (37%), Positives = 135/225 (59%), Gaps = 10/225 (4%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
YVIE N+ Y + A E +T ++K+GE + LLGPNGAGKTTL++ + G T +G+I
Sbjct: 2 YVIEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEIR 61
Query: 63 VFGKSPSE--VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
V GK P++ V++ + +PQ P D+ +Y G + E+ KRG
Sbjct: 62 VLGKKPTDRHVKKFLGVIPQECE-----PYG--DLTVWDNIYYMGRLKGASKDEIKKRGE 114
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E+L+ L L+ R+LSGG K+R +IA AL++NP+LL+LDEP + LDP+AR E
Sbjct: 115 ELLERLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEI 174
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEV 225
L ++++ G +M++TTH ++ + DK+ + RK++ G+P ++
Sbjct: 175 LLNMRKE-GQSMLLTTHYLDEAERLADKIYFLSRKIIVEGTPTQI 218
>pir||B72089 ABC transporter, ATP-binding protein CP0412 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
>gi|4376623|gb|AAD18492.1| (AE001619) rRNA methylase
[Chlamydophila pneumoniae CWL029]
>gi|7189336|gb|AAF38256.1| (AE002202) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978720|dbj|BAA98556.1| (AP002546) rRNA methylase
[Chlamydophila pneumoniae J138]
Length = 259
Score = 146 bits (365), Expect = 2e-34
Identities = 78/228 (34%), Positives = 135/228 (59%), Gaps = 2/228 (0%)
Query: 9 NLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSP 68
NL + Y+ + ++F L KG +LGPNGAGK+TLL+ GL G + F +
Sbjct: 13 NLCVNYEHAAVLYHISFSLGKGSLTAILGPNGAGKSTLLKASLGLIKPSSGTVYFFNQKF 72
Query: 69 SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGL 128
+VR+++AY+PQ S+++ P++VLD+ MG KG+ I + + IL+ +GL
Sbjct: 73 KKVRQRIAYMPQRASVDWDFPMTVLDLALMGCYSYKGM-WGRISSDDRREAFHILERVGL 131
Query: 129 KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDM 188
+ +A + +LSGGQ+QR +ARALM +L L+DE SA+D + + L +++ D
Sbjct: 132 ESVADRQIGQLSGGQQQRAFLARALMQKADLYLMDELFSAIDMASFKTSVGVLQELR-DQ 190
Query: 189 GITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
G T+++ HD++ + ++ D V+L++++L+ G +E L + I + YG
Sbjct: 191 GKTIVVVHHDLSHVRQLFDHVVLLNKRLICCGPTDECLNGDTIFQTYG 238
>gb|AAC35949.1| (AF077010) ABC transporter ATPase TroB [Chlamydia trachomatis]
Length = 286
Score = 145 bits (363), Expect = 4e-34
Identities = 83/229 (36%), Positives = 136/229 (59%), Gaps = 2/229 (0%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
E+L + YD + +TF L G ++GPNGAGK+TLL+ GL G+ L FG+
Sbjct: 37 EDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQR 96
Query: 68 PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLG 127
S+ ++AY+PQ S+++ P++VLD+V MG KG+ + I + + + IL+ +G
Sbjct: 97 FSKAHHRIAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWN-RISTDDRQEAMRILERVG 155
Query: 128 LKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKED 187
L+ A + +LSGGQ+QR +AR+LM +L L+DE SA+D + L ++K +
Sbjct: 156 LEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQELKSE 215
Query: 188 MGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
G T+++ HD++ + ++ D V+L+++ LV GS EE L E I + YG
Sbjct: 216 -GKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQAYG 263
>pir||S61910 hypothetical protein 5 - Streptococcus parasanguis
>gi|567769|gb|AAA53075.1| (M26130) ORF5; predicted
protein shows similarity to ATP-binding transport
proteins AmiE and AmiF of Streptococcus pneumoniae;
disruptuion of ORF5 leads to aminopterin resistance
[Streptococcus parasanguinis]
Length = 240
Score = 145 bits (361), Expect = 7e-34
Identities = 83/233 (35%), Positives = 139/233 (59%), Gaps = 3/233 (1%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I+ E+L++ Y A+E L+ ++ L +LGPNGAGK+TL++ + GL + G++ +
Sbjct: 1 MIQIEHLSVAYQQTLALEDLSLTIQGPTILGILGPNGAGKSTLIKAMLGL-LPHSGRVQL 59
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
K S+V ++VAYV Q +++F P++V + VS+G LY I +E +K+ L
Sbjct: 60 DQKDLSQVLQRVAYVEQKSAIDFHFPITVRECVSLG-LYPHLSIFKRKSKEDLKKVENAL 118
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ L ++A + +LSGGQ QRV+IAR L+ +++ LDEP + +D + TL
Sbjct: 119 KLVNLLDLADRQIGQLSGGQFQRVLIARCLVQEADVIFLDEPFAGIDSVSEDIIMQTLQT 178
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+K++ G T++I HD++ + DKV+L+ RKL+AFG EE E + YG
Sbjct: 179 LKQE-GKTILIVHHDLSKVPAYFDKVLLLHRKLIAFGKTEETFTKENLHAAYG 230
>pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB - Bacillus
subtilis >gi|2293152|gb|AAC00230.1| (AF008220) putative
transporter [Bacillus subtilis]
>gi|2635560|emb|CAB15054.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 250
Score = 144 bits (359), Expect = 1e-33
Identities = 76/235 (32%), Positives = 137/235 (57%), Gaps = 4/235 (1%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
+ +E +N+T+ Y ++ ++ ++ +G+ + ++GPNGAGK+TL++ + GL G I
Sbjct: 2 FPVELDNVTVAYHKKPVLQDISLQVPEGKLIGIIGPNGAGKSTLIKTILGLVPRASGDIS 61
Query: 63 VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV-IKRGLE 121
++GK + R ++ YVPQ S+++ P S LDVV MG + GL+ P++ ++
Sbjct: 62 IYGKDYKDQRTRIGYVPQRGSVDWDFPTSPLDVVLMGRYGRIGLL--KRPKKADVEMAKA 119
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L +G+ + AK+ +LSGGQ+QRV +ARAL N ++ +DEP + +D + L
Sbjct: 120 ALTKVGMHDYAKRQISQLSGGQQQRVFLARALCQNADIYFMDEPFAGVDAATERAIMTLL 179
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+++KE G T+++ HD+ + D ++L+ + +AFG E V E + K YG
Sbjct: 180 AELKE-KGKTVLVVHHDLQTAEDYFDWILLLHLRKIAFGPTENVFTIENLQKTYG 233
>dbj|BAB05108.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 250
Score = 144 bits (359), Expect = 1e-33
Identities = 80/241 (33%), Positives = 140/241 (57%), Gaps = 15/241 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M V++ +NL++ Y+ +A++ + F+ G+ + +LGPNGAGK+TL++ + GL Y G
Sbjct: 1 MNPVVKVDNLSVFYEQHQAIKNIRFQAGPGQMIGILGPNGAGKSTLMKAILGLE-RYTGT 59
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLY------KKGLIHFNIPQE 114
+ V K VR+++AYVPQ ++++ P+ V DVV MG + G + +E
Sbjct: 60 VKVLDKHVRHVRKQIAYVPQRNAIDWDFPVLVEDVVMMGRFAHIPWFKRAGKNDKRLVEE 119
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
+K+ +G++E + ELSGGQ+QRV IARAL EL LDEP +D +
Sbjct: 120 SLKK-------VGMEEYRSRQIGELSGGQQQRVFIARALAQESELFFLDEPFVGIDVTSE 172
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKV 234
S L +++ D G T+ + HD++ + + D+V++++++L+A+G +V E++ K
Sbjct: 173 SIILSLLQELR-DRGKTIFVVHHDLSKVEKYFDQVLMLNKELIAYGPVADVYTPEMVAKT 231
Query: 235 Y 235
Y
Sbjct: 232 Y 232
>gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphylococcus aureus]
Length = 261
Score = 143 bits (357), Expect = 2e-33
Identities = 89/241 (36%), Positives = 144/241 (58%), Gaps = 7/241 (2%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M V E +N+ YD K +E + K+ KGE L ++GPNGAGK+TLL+++ GL G+
Sbjct: 7 MTPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGE 66
Query: 61 ILVFGKSPSEVRE--KVAYVPQTFS-LNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
I V G + K++YV Q + N P SV +VV + GL K + + +
Sbjct: 67 IFVGGIDFKNKKTSIKLSYVSQKANAFNSGFPASVKEVV-LSGLTKTKRLFQTFNSKDNE 125
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+ +++L+ L + ++ K+ ELSGGQ+QRV+IARAL+S P +L+LDEP + +D K E
Sbjct: 126 KVIKVLERLNISDLIHKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEF 185
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLR-DEI-IGKVY 235
+TL ++K++ GIT+I+ THD+ + + +V +++ L G+ +E DE+ I K+Y
Sbjct: 186 YNTLDQLKQE-GITIILVTHDIGVVADTATEVACLNKHLHFHGTTDEFKSLDEVEISKIY 244
Query: 236 G 236
G
Sbjct: 245 G 245
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 142 bits (355), Expect = 3e-33
Identities = 85/228 (37%), Positives = 131/228 (57%), Gaps = 12/228 (5%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y IE ENL Y AV+G++FK+KKGE LGPNGAGKTT + VL L GK +
Sbjct: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Query: 63 VFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
V G K P EVR+K+ V Q SL+ ++ + +Y G+I+ +E+ ++
Sbjct: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLD-------RELTAYENMYIHGMIYGLKGRELKEK 114
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+L F+ L + + SGG ++R+ IARAL+ PE+L LDEP LDP+ R
Sbjct: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ +KE+ +T+ +TTH ++ ++ D++ +ID K++A G+ EE+
Sbjct: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
>gi|11498042 iron (III) ABC transporter, ATP-binding protein (hemV-1)
[Archaeoglobus fulgidus] >gi|7445946|pir||F69303 iron
(III) ABC transporter, ATP-binding protein (hemV-1)
homolog - Archaeoglobus fulgidus
>gi|2650201|gb|AAB90807.1| (AE001075) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Archaeoglobus
fulgidus]
Length = 248
Score = 142 bits (355), Expect = 3e-33
Identities = 90/253 (35%), Positives = 144/253 (56%), Gaps = 12/253 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE +L Y+S ++ L F+ ++GE + +LGPNG+GKTTLL+ +AG+ +G +LV
Sbjct: 1 MIEVRSLYYSYNSKPVIQDLEFEAERGEFVFILGPNGSGKTTLLKCMAGI-LKPKGAVLV 59
Query: 64 FGKSPS-----EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
S ++ K+AYVPQ F L+V DVV +G ++ + F+ E +
Sbjct: 60 EKVSIDRLSGRDLARKLAYVPQRSDSGF---LTVYDVVLLG---RRPYMGFSPSDEDYRI 113
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
++L L LK+ + + ELSGG+ Q+V+IARAL P++LLLDEP + LD K +IE
Sbjct: 114 VEDVLSLLDLKKFSYRRINELSGGELQKVMIARALAQKPKILLLDEPTNNLDVKNQIEIM 173
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPA 238
L KI ++ I++I T HD+N DK++++ + +EVL E I +VYG
Sbjct: 174 KLLRKIADEKEISVISTMHDLNLAAIFADKIVMLKNGRIFASGGKEVLTQENIKEVYGIE 233
Query: 239 SKAVRVGERLYCI 251
+ +R R+ +
Sbjct: 234 VEVLRHNGRVLIV 246
>pir||G81714 ABC transporter, ATP-binding protein TC0339 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190381|gb|AAF39202.1|
(AE002301) ABC transporter, ATP-binding protein
[Chlamydia muridarum]
Length = 259
Score = 142 bits (354), Expect = 5e-33
Identities = 80/229 (34%), Positives = 136/229 (58%), Gaps = 2/229 (0%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
++L + YD + + F L G ++GPNGAGK+TLL+ GL G+ L FG+
Sbjct: 12 DDLCVNYDHSDVLCHIAFSLPSGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQK 71
Query: 68 PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLG 127
++V +++AY+PQ S+++ P++VLD+V MG KG+ + I + + IL+ +G
Sbjct: 72 FAKVHQRIAYMPQRASVDWDFPMTVLDLVLMGCYGYKGMWN-RISTGDRREAMNILERVG 130
Query: 128 LKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKED 187
L + A + +LSGGQ+QR +AR+LM +L L+DE SA+D + L +K++
Sbjct: 131 LADFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYRMVVDVLQDLKKE 190
Query: 188 MGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
G T+++ HD++ + ++ D V+L+++ LV GS E+ L E I + YG
Sbjct: 191 -GKTIVVIHHDLSNVRQLFDHVILLNKHLVCSGSVEKCLTKEAIFQAYG 238
>pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AAC06828.1|
(AE000698) ABC transporter [Aquifex aeolicus]
Length = 232
Score = 141 bits (352), Expect = 8e-33
Identities = 86/236 (36%), Positives = 137/236 (57%), Gaps = 18/236 (7%)
Query: 4 VIEAENLTIMYDSVKAV-EGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
VIE +NLT YD V E ++F ++KG+ L ++GPNGAGK+TLL+++ G G+I
Sbjct: 3 VIEVKNLTFSYDGKHNVLEDVSFYVEKGDFLGIVGPNGAGKSTLLKLILGFLKPKSGEIY 62
Query: 63 VFGKSPSEVRE--KVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
+FGK E ++ +V YVPQ S+ P +V +++S KK + +
Sbjct: 63 LFGKKIEEFKDWKRVGYVPQRLSVEHAFPGTVKELLSSVCEDKKEIDY------------ 110
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
+++FL LK I K F +LSGGQ+QRV++A AL NPEL+LLDEP LD A S
Sbjct: 111 -LVEFLKLKNIVNKQFTKLSGGQQQRVLLAMALSYNPELILLDEPTVGLDVHAINHFMSI 169
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
L + + ++++ +HD+ L++ K++ +++K+ FG PE + E I + +G
Sbjct: 170 LLDLNMNHKKSIVMISHDIGTLLKHASKILCLNKKVCYFGEPEGAI--EYIEEAFG 223
>sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN SCAA 5'REGION
(ORF1) >gi|7445846|pir||T11549 ATP binding protein -
Streptococcus gordonii >gi|310631|gb|AAA71945.1|
(L11577) ATP binding protein [Streptococcus gordonii]
Length = 251
Score = 140 bits (350), Expect = 1e-32
Identities = 77/234 (32%), Positives = 140/234 (58%), Gaps = 3/234 (1%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y+IE +NL++ Y A++ +K ++GPNGAGK+TL++ L G+ ++QG+ L
Sbjct: 12 YMIEIQNLSVSYQGQLALDKANVTIKGPTITGIIGPNGAGKSTLIKGLLGI-VDHQGQAL 70
Query: 63 VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
+ G+ + +++AYV Q ++++ P+ V + VS+G LY K + + + +
Sbjct: 71 LDGQPLDKELKRIAYVEQKINIDYNFPIKVKECVSLG-LYPKIKLFQRLKTSDWDKVNQA 129
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
L +GL++ A++ +LSGGQ QRV+IAR L+ + + LDEP +D + TL
Sbjct: 130 LKIVGLEDFAERQISQLSGGQFQRVLIARCLVQEADYIFLDEPFVGIDSVSEEIIMKTLR 189
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
++++D G T++I HD++ ++ D+V+L+++K+VAFGS E E + + YG
Sbjct: 190 QLRKD-GKTILIVHHDLSKVVAYFDQVLLLNKKVVAFGSTESTFTKENMQQTYG 242
>emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococcus xylosus]
Length = 257
Score = 139 bits (348), Expect = 2e-32
Identities = 88/242 (36%), Positives = 144/242 (59%), Gaps = 15/242 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
V E +N+ +D+ + +E + K+ +GE + ++GPNGAGK+TLL+++ GL +G+I V
Sbjct: 5 VFELKNIDYYFDNKQVLENINIKINRGEFVAIVGPNGAGKSTLLKIILGLLPIQKGRIYV 64
Query: 64 FGK--SPSEVREKVAYVPQ---TFSLNFRVPLSVLDVVSMGGLYKKGLIHF--NIPQEVI 116
GK + ++ K++YV Q F F P SV +VV G +K L + +E +
Sbjct: 65 DGKDYNGNQSLLKISYVSQKAQAFKAGF--PASVKEVVISGLTKRKKLFQWFNRNDEESV 122
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K +L L ++ + K+ ELSGGQ+QRV+IARAL+S P +L+LDEP S +D K E
Sbjct: 123 KT---VLSRLNIEHLIDKNIAELSGGQQQRVLIARALISEPSVLILDEPTSGIDAKHVSE 179
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLR-DEI-IGKV 234
TL +K++ G+T+I+ THD+ + + +V +++ L G+ E+ DE+ I K+
Sbjct: 180 FYETLETLKQE-GVTIILVTHDIGVVADTATEVACLNKHLHFHGTTEDFKSLDEVEISKI 238
Query: 235 YG 236
YG
Sbjct: 239 YG 240
>pir||A71357 probable ABC transporter, ATP-binding protein (troB) - syphilis
spirochete >gi|1777934|gb|AAC45726.1| (U55214) TroB
[Treponema pallidum] >gi|3322432|gb|AAC65154.1|
(AE001201) ABC transporter, ATP-binding protein (troB)
[Treponema pallidum]
Length = 266
Score = 139 bits (347), Expect = 3e-32
Identities = 77/234 (32%), Positives = 133/234 (55%), Gaps = 2/234 (0%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y ++ ++LT+ Y + + ++ +G ++GPNGAGK+TLL+ + GL G++
Sbjct: 9 YAVQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVR 68
Query: 63 VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
VFG+ S+ R +VAYVPQ ++++ P +V DVV MG G I + R E
Sbjct: 69 VFGRPFSKERRRVAYVPQRSAVDWDFPTTVFDVVLMGSYGSLGWI-LRPGKREKARAREA 127
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
++ +G+ + ELSGGQ+QRV +ARAL+ + +L +DEP +D A +A TL
Sbjct: 128 IEEVGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVD-AATEQAIVTLL 186
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
K + G T+++ HD+ + E D+V+L++ +++A G+ +E + + YG
Sbjct: 187 KTLKGRGKTLLVVHHDLQTVAEYFDRVLLLNVRVIAEGAVVSAFTEEYVQRAYG 240
>sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0873
>gi|2826343|gb|AAB98878.1| (U67531) ferric enterobactin
transport ATP-binding protein [Methanococcus jannaschii]
Length = 290
Score = 139 bits (346), Expect = 4e-32
Identities = 78/236 (33%), Positives = 140/236 (59%), Gaps = 5/236 (2%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ ENL++ Y + VEG+ ++ +GE L ++GPNGAGK+TLL+ +A +G + +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPKKGVVYL 60
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP---LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
GK +++ K L RV ++ DVV++G L + + K +
Sbjct: 61 NGKKIHDLKPKDLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFG-RLTERDKKIII 119
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E + + + +K+F E+S G++Q+++IARAL P++L+LDEP S LD K +IE T
Sbjct: 120 ESARAVNAEYLLEKNFFEMSDGERQKIMIARALAQEPKVLILDEPTSFLDAKHKIELTLL 179
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVY 235
L K+ ++ + +++T HD+ + I DK+ LI + K++A+G PE V++ EI+ ++Y
Sbjct: 180 LRKLADEKNLAIVVTLHDIELALRIADKMALIKNHKVIAYGYPENVMKREIVNELY 235
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 138 bits (344), Expect = 7e-32
Identities = 88/261 (33%), Positives = 147/261 (55%), Gaps = 17/261 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++AEN+ Y V+G++F LKKGE+ LLGPNGAGK+T + +++GL + G I V
Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV 60
Query: 64 ----FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
GK ++ ++K+ VPQ +L + + +++ G +Y GL H E KR
Sbjct: 61 GGYVIGKETAKAKQKIGIVPQEIAL-YPTLTAHENLMFWGKMY--GLTH----DEAKKRA 113
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+L+++GL E AK SGG K+R+ I ALM PELL++DEP +DP++R
Sbjct: 114 AEVLEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILE 173
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR----DEIIGKV 234
T+ ++ E G+T+I T+H + + + D++ +ID+ +++A G+ ++ D II
Sbjct: 174 TVKQLNE-TGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTIIQLT 232
Query: 235 YGPASKAVRVGERLYCIIGDV 255
++A V R + DV
Sbjct: 233 VSGINEAFLVAIRSLAHVNDV 253
>sp|Q57399|YE70_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1470
>gi|1074080|pir||F64125 ferric enterobactin transport
ATP-binding protein homolog HI1470 - Haemophilus
influenzae (strain Rd KW20) >gi|1574311|gb|AAC23118.1|
(U32825) iron chelatin ABC transporter, ATP-binding
protein, putative [Haemophilus influenzae Rd]
Length = 253
Score = 138 bits (343), Expect = 9e-32
Identities = 86/234 (36%), Positives = 126/234 (53%), Gaps = 20/234 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAV-EGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQG 59
M + ENL Y + + + L F L KG+ L +LG NG GK+TLL +L G+H QG
Sbjct: 1 MNKALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQG 60
Query: 60 KILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNI----PQEV 115
KI EV + + +VPQ FS F SVLD+V MG H N
Sbjct: 61 KI--------EVYQSIGFVPQFFSSPFAY--SVLDIVLMGRS-----THINTFAKPKSHD 105
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
+ ++ LD+L L +AK+ F LSGGQ+Q ++IARA+ S +L+LLDEP SALD +
Sbjct: 106 YQVAMQALDYLNLTHLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQD 165
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDE 229
S L + + +T++ TTH N ++ I +K +L++++ FG +L E
Sbjct: 166 IVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFKFGETRNILTSE 219
>pir||A64409 ferric enterobactin transport ATP-binding protein homolog -
Methanococcus jannaschii
Length = 290
Score = 138 bits (343), Expect = 9e-32
Identities = 78/236 (33%), Positives = 139/236 (58%), Gaps = 5/236 (2%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ ENL++ Y + VEG+ ++ +GE L ++GPNGAGK+TLL+ +A +G + +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPKKGVVYL 60
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP---LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
GK +++ K L RV ++ DVV++G L + + K +
Sbjct: 61 NGKKIHDLKPKDLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFG-RLTERDKKIII 119
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E + + + +K+F E+S G++Q+++IARAL P++L+LDEP S LD K +IE T
Sbjct: 120 ESARAVNAEYLLEKNFFEMSDGERQKIMIARALAQEPKVLILDEPTSFLDAKHKIELTLL 179
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVY 235
L K+ + + +++T HD+ + I DK+ LI + K++A+G PE V++ EI+ ++Y
Sbjct: 180 LRKLADXKNLAIVVTLHDIELALRIADKMALIKNHKVIAYGYPENVMKREIVNELY 235
>pir||T45470 ATP-binding ABC transport protein [imported] - Erysipelothrix
rhusiopathiae >gi|1335913|gb|AAB01157.1| (U52850)
unknown [Erysipelothrix rhusiopathiae]
Length = 246
Score = 138 bits (343), Expect = 9e-32
Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
EY IE E+LT+ YD + K +KG+ ++GPNGAGK+T+++ + GL GKI
Sbjct: 5 EYAIEVEDLTVTYDVKPVLWDCDVKFEKGKLTAIVGPNGAGKSTMIKAIMGLLKPISGKI 64
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
+ G+ + + +AYVPQ+ S+++ P +V D+V MG G I +E + E
Sbjct: 65 TINGQHQKDEYKNIAYVPQSGSVDWDFPATVEDIVLMGRYGHIGWIK-RPRKEDREIANE 123
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+L+ +G+ + +LSGGQ+QRV +ARAL E+ +LDEPL +D K E TL
Sbjct: 124 MLERVGMSAYRDRQISQLSGGQQQRVFLARALTQQAEIYILDEPLKGVDVKTE-EILMTL 182
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVY 235
K G T+I+ HD+ + D + L++ KLVA+G + E + Y
Sbjct: 183 LKELAASGKTVIVVHHDLTSIEGYFDNIALVNVKLVAWGPVQNTFTQENLKLTY 236
>pir||C75077 iron (iii) abc transporter, ATP-binding protein (hemv-1) PAB0678 -
Pyrococcus abyssi (strain Orsay)
>gi|5458432|emb|CAB49920.1| (AJ248286) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Pyrococcus
abyssi]
Length = 257
Score = 136 bits (340), Expect = 2e-31
Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 13/255 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VIE NL Y+ + G+ F + +GE L++LGPNGAGKTTLLR +AG+ +G + V
Sbjct: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKV 65
Query: 64 FGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
FGKS E+ + +AYVPQ F L V D V +G GL E ++R
Sbjct: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
L++ L ++E + + LSGG+ Q+V IARA+ ++LLDEP + LDPK++I+
Sbjct: 123 ALKL---LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPA 238
+ + + G T+I HD+ + G+K + + V + L D ++ + YG +
Sbjct: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGIS 238
Query: 239 SKAVRVGERLYCIIG 253
K ++G + ++G
Sbjct: 239 VKVAKLGREIVPLVG 253
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 136 bits (339), Expect = 3e-31
Identities = 78/213 (36%), Positives = 135/213 (62%), Gaps = 13/213 (6%)
Query: 18 KAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEV---REK 74
++V G++F++++GE + LLGP+G+GKTT+LR++AGL +G + + GK +++ +
Sbjct: 17 RSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRN 76
Query: 75 VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLEILDFLGLKEIAK 133
V V Q ++L ++V D VS G K+ +P+ E+ R E+L F+ L+ A
Sbjct: 77 VGLVFQNYALFQH--MTVYDNVSFGLREKR------VPKDEMDARVRELLRFMRLESYAN 128
Query: 134 KSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMI 193
+ ELSGGQ+QRV +ARAL P++LL DEP +A+D + R E + + ++ ++MG+T +
Sbjct: 129 RFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSV 188
Query: 194 ITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEV 225
THD +E+ D+V+++ + + FG+PEEV
Sbjct: 189 FVTHDQEEALEVADRVLVLHEGNVEQFGTPEEV 221
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 136 bits (338), Expect = 3e-31
Identities = 82/228 (35%), Positives = 130/228 (56%), Gaps = 19/228 (8%)
Query: 9 NLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSP 68
N+ + V AV+ L+ ++K GE L+LLGP+G GKTT LR++AGL +G+I +
Sbjct: 11 NIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLV 70
Query: 69 SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP----------QEVIKR 118
++ EK +VP V V LY ++ NI QE+ KR
Sbjct: 71 ADP-EKGVFVPPK-------ERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKR 122
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+ + LGL E+ + RELSGGQ+QRV + RA++ P++ L+DEPLS LD K R++
Sbjct: 123 VREVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 182
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ L K++ +G+T I THD + +GD++ ++++ +L G+P+EV
Sbjct: 183 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEV 230
>pir||D69180 ABC transporter - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621685|gb|AAB85111.1| (AE000842) ABC
transporter [Methanobacterium thermoautotrophicum]
Length = 250
Score = 136 bits (338), Expect = 3e-31
Identities = 78/233 (33%), Positives = 129/233 (54%), Gaps = 10/233 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
IE E+L+ + + + + K+ GE L ++GPNG GKTTLLR++ G +G + V
Sbjct: 6 IEMEDLSYCINGREILRNINLKVPMGELLAVIGPNGGGKTTLLRLITGQIKPTRGTVRVL 65
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP-QEVIKRGLEIL 123
G P + R ++ Y+PQ P+++L V + G Y++ F P + K+ L L
Sbjct: 66 GMKPEDSRSRIGYLPQRSHFETDFPINILQTVLI-GTYRR----FEAPTDDDRKKALRAL 120
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+G+ E + ELSGG+ QRV +ARAL+ P+LLLLDEP +++DP R + +
Sbjct: 121 KMVGMLEYRDRKIGELSGGELQRVFLARALVREPDLLLLDEPTASVDPAFRGSFYRIIDE 180
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
++++M T++I +HD+ + D V ++ +L G+ EE L+ I YG
Sbjct: 181 LRDEM--TIVIVSHDIGTVARHVDSVACLNHRLFVHGTVEEALK--CIDDAYG 229
>pir||H75293 probable manganese ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6460091|gb|AAF11830.1|AE002060_9 (AE002060)
manganese ABC transporter, ATP-binding protein, putative
[Deinococcus radiodurans]
Length = 239
Score = 135 bits (337), Expect = 5e-31
Identities = 80/225 (35%), Positives = 135/225 (59%), Gaps = 10/225 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ E LT+ Y S A+E T + + G+ ++GPNGAGK+TLLR LAGL T+Y+G++
Sbjct: 1 MLGVEGLTVRYGSQVALENATLRFEAGQFTAVIGPNGAGKSTLLRALAGLLTDYEGRVTF 60
Query: 64 F-GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP--QEVIKRGL 120
G SP R ++YVPQ +L++ P++V D MG + G + + P +++++
Sbjct: 61 DPGHSP---RTCLSYVPQQQTLDWGFPVTVWDTAMMGRTGRLGWLRWPGPRDRQIVE--- 114
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
+ L G+ ++ + LSGGQ+QRV++AR L LLLLDEPL+ +D + E
Sbjct: 115 DALRETGVYDLRSRHIGALSGGQRQRVLLARMLARQGHLLLLDEPLTGVDVTTQ-EQLMA 173
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEV 225
L + + D G +++ THD+ D+++LI+R+++A G+P+ V
Sbjct: 174 LLRRQADQGRAVVMVTHDLEQARRWCDRIVLINRRVIADGTPDAV 218
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 135 bits (336), Expect = 6e-31
Identities = 81/228 (35%), Positives = 133/228 (57%), Gaps = 9/228 (3%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VI ++ +D + + L + GE L +LGP+G GKTT+LR++AG T QG+IL+
Sbjct: 17 VIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILL 76
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLE 121
+ ++V + +V F P ++V + V+ G +K +PQ E+ R +E
Sbjct: 77 DDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQK------VPQSEIEPRVME 130
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L + L E+A++ +LSGGQ+QR+ IARA+++ P++LLLDE LSALD K R + S L
Sbjct: 131 ALRMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSEL 190
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRD 228
+++ +GIT I THD + + D+++++ K+ GSP E+ D
Sbjct: 191 KQLQRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYED 238
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 135 bits (336), Expect = 6e-31
Identities = 83/228 (36%), Positives = 130/228 (56%), Gaps = 19/228 (8%)
Query: 9 NLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSP 68
N+ + AV+ L+ ++K GE L+LLGP+G GKTT LR++AGL G+I + K
Sbjct: 8 NVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYIDDKLV 67
Query: 69 SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP----------QEVIKR 118
++ EK +VP V V LY ++ NI QE+ +R
Sbjct: 68 ADP-EKGIFVPPK-------ERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+ + LGL E+ K+ RELSGGQ+QRV + RA++ P++ L+DEPLS LD K R++
Sbjct: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ L K++ +G+T I THD + +GD++ +++R +L G+P+EV
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEV 227
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 134 bits (335), Expect = 8e-31
Identities = 87/237 (36%), Positives = 144/237 (60%), Gaps = 11/237 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
IE N++ +++ KA++ + ++ GE + LLGP+G GKTTLLR++AGL T G I+
Sbjct: 3 IEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFH 62
Query: 65 GKSPSE--VREK-VAYVPQTFSLNFRVPLSVLDVVSMGGLYK-KGLIHFNIPQEVIKRGL 120
G+ S+ VR++ V +V Q ++L FR ++V D V+ G K KG + IK +
Sbjct: 63 GEDVSQHDVRDRNVGFVFQHYAL-FR-HMTVFDNVAFGLRMKPKGE---RPGESAIKAKV 117
Query: 121 -EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+L+ + L +A + +LSGGQ+QR+ +ARAL P++LLLDEP ALD K R E
Sbjct: 118 HELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRR 177
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEVLRDEIIGKVY 235
L+++ E++ +T + THD +E+ D+++++++ ++ GSP EV + VY
Sbjct: 178 WLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVY 234
>pir||D72415 zinc ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980616|gb|AAD35218.1|AE001698_7
(AE001698) zinc ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 240
Score = 134 bits (334), Expect = 1e-30
Identities = 75/234 (32%), Positives = 137/234 (58%), Gaps = 20/234 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E +NLT + + ++ +TF +++GE + ++GPNGAGKTTL+R+L G NY+GK+
Sbjct: 3 IVEVKNLTYRINDFEILKNVTFSVEEGEFVGIIGPNGAGKTTLVRILVGDIKNYEGKV-- 60
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMG--GLYKKGLIHFNIPQEVIKRGLE 121
EVR K+ Y+PQ + P++V + +MG G Y+K I E ++ L+
Sbjct: 61 ------EVRGKIGYLPQLHQVQREFPITVKEFAAMGMYGRYRK------IDWEKVRSTLK 108
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+ G+ + LSGG+ QR+ +ARAL+S+P++L+LDEP + +D + L
Sbjct: 109 DV---GILHKENDPIKNLSGGEFQRLSLARALLSDPDILVLDEPEAGVDEMGKASFYELL 165
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVY 235
++++++ IT+I+ +HD+ + + +M ++R L G P E + E + K++
Sbjct: 166 NRLRKEKNITVIMVSHDIGMVFKECSTIMCLNRTLHCHG-PTETINPEDLKKIF 218
>dbj|BAB05113.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 259
Score = 134 bits (334), Expect = 1e-30
Identities = 79/238 (33%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E I+ N+ YD +E +T +++G + L+GPNG+GK+TL++ + GL QG I
Sbjct: 7 ELTIDIRNVAYRYDYRNVLENVTLPIRQGAFVGLVGPNGSGKSTLIKCILGLQKPSQGSI 66
Query: 62 LVFGKSPSEVRE--KVAYVPQTF-SLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
+FG+ + R+ ++ YV Q S N P +V +VVSMG K G+ F + ++ ++
Sbjct: 67 KLFGQPVDKFRQWDRIGYVSQKANSFNSGFPATVYEVVSMGLFGKVGMFRF-LTKKHKQK 125
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E + +G+ ++ ELSGGQ+QRV IARAL+S+PELL+LDEP +D +
Sbjct: 126 VKEAVASVGMSGYLHQNIGELSGGQQQRVFIARALVSDPELLILDEPTVGVDVSSVKSFY 185
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+ LS++ + GIT+++ THD+ + + V +++ L G + + + + YG
Sbjct: 186 TLLSELNQKRGITLLLVTHDIGAMTDYVTDVACLNKHLHFHGDTKAFEQTQDLTAFYG 243
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 134 bits (334), Expect = 1e-30
Identities = 90/256 (35%), Positives = 137/256 (53%), Gaps = 14/256 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ +N++ +D + ++ ++ +KKGE +LGP+G GKTTLLRV+AG G +L+
Sbjct: 6 VSIKNVSKFFDDFQVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEGVESGDVLLD 65
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
GKS + V F P L+V + ++ KK E+ +R E+L
Sbjct: 66 GKSILNLPPNKRPVNIIFQNYALFPHLTVFENIAFPLKLKK-----LSENEINQRVNELL 120
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ ++E A+K +LSGGQKQRV IARAL + P +LLLDEPLSALD K R E L
Sbjct: 121 SLIRMEEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVELDN 180
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEI-------IGKVY 235
+ + +GIT I THD I + D+V L++ ++V G+P EV + IG+
Sbjct: 181 LHDRVGITFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEVYESPVNVFAATFIGETN 240
Query: 236 GPASKAVRVGERLYCI 251
++ V V + Y +
Sbjct: 241 LMKAEVVEVEDEYYVV 256
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 134 bits (333), Expect = 1e-30
Identities = 81/228 (35%), Positives = 129/228 (56%), Gaps = 9/228 (3%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE ++ Y S + + GE + +LGP+G GKTT+LR+LAGL G I++
Sbjct: 19 IIELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIIL 78
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIK-RGLE 121
G+ + V + ++ F P +++ + V+ G +K +P E IK R LE
Sbjct: 79 DGEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQK------VPNEEIKPRVLE 132
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L + L+E+A + +LSGGQ+QR+ IARA+++ P++LLLDE LSALD K R + L
Sbjct: 133 ALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQEL 192
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
++ +GIT I THD I + D+++L+ + K+ GSP E+ D
Sbjct: 193 KMLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYED 240
>sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDCT
>gi|7445684|pir||D64896 probable ABC-type transport
protein b1441 - Escherichia coli
>gi|1742349|dbj|BAA15070.1| (D90783)
Spermidine/putrescine transport ATP-binding protein
PotA. [Escherichia coli] >gi|1742356|dbj|BAA15076.1|
(D90784) Spermidine/putrescine transport ATP-binding
protein PotA. [Escherichia coli]
>gi|1787712|gb|AAC74523.1| (AE000241) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 337
Score = 134 bits (333), Expect = 1e-30
Identities = 83/227 (36%), Positives = 130/227 (56%), Gaps = 7/227 (3%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M Y +E +N++ +Y V+AV+G++ +K GE +LGP+G+GKTT LR++AG G
Sbjct: 1 MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA 60
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
I +FGK S + V F P +S+LD V+ G L KG+ ++
Sbjct: 61 ISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYG-LMVKGVNK----KQRHAMA 115
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E L+ + L + ++ +LSGGQ+QRV IARAL++ P +LLLDEPL ALD K R +
Sbjct: 116 QEALEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQL 175
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
L K+++ +GIT I THD + + D+V + + ++ SP ++
Sbjct: 176 ELKKLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDL 222
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 134 bits (333), Expect = 1e-30
Identities = 82/228 (35%), Positives = 131/228 (56%), Gaps = 9/228 (3%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE ++T Y S ++ + GE L +LGP+G GKTT+LR+LAGL G I++
Sbjct: 10 IIELRSITKSYGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIIL 69
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIK-RGLE 121
G+ + V + +V F P +++ + V+ G +K +P+ IK R LE
Sbjct: 70 DGEDITNVPAEKRHVNTVFQSYALFPHMTIFENVAFGLRMQK------VPEAEIKPRVLE 123
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L + L+E+A + +LSGGQ+QR+ IARA+++ P++LLLDE LSALD K R + L
Sbjct: 124 ALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYEL 183
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
++ +GIT I THD I + D+++L+ + K+ GSP E+ +
Sbjct: 184 KVLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEE 231
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 134 bits (333), Expect = 1e-30
Identities = 80/224 (35%), Positives = 127/224 (55%), Gaps = 19/224 (8%)
Query: 13 MYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVR 72
++ V AV ++ ++K GE ++LLGP+G GKTT LR++AGL +G+I + K ++
Sbjct: 12 VFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADP- 70
Query: 73 EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP----------QEVIKRGLEI 122
EK +VP + V LY ++ NI QE+ +R E+
Sbjct: 71 EKGIFVPPK-------DRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREV 123
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ LGL E+ + RELSGGQ+QRV + RA++ P++ L+DEPLS LD K R+ + L
Sbjct: 124 AELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELK 183
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K++ +G+T I THD + +GD++ +++R L GSP+EV
Sbjct: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEV 227
>gi|11498996 iron (III) ABC transporter, ATP-binding protein (hemV-3)
[Archaeoglobus fulgidus] >gi|7430360|pir||H69424
probable iron(III) ABC transporter hemV-3 -
Archaeoglobus fulgidus >gi|2649168|gb|AAB89842.1|
(AE001007) iron (III) ABC transporter, ATP-binding
protein (hemV-3) [Archaeoglobus fulgidus]
Length = 405
Score = 134 bits (333), Expect = 1e-30
Identities = 82/247 (33%), Positives = 141/247 (56%), Gaps = 11/247 (4%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK- 66
+ +++ S + ++ +TF++ +GE L LLGPNG+GKTT+LR + G+ +G +L+ G+
Sbjct: 6 KGVSVKLGSREVLKDVTFEVGEGELLALLGPNGSGKTTMLRTIFGMLKPLKGVVLLDGRE 65
Query: 67 --SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-YKKGLIHFNIPQEVIKRGLEIL 123
S E K+ ++PQ + L V+DVV +G Y GL +E + +E L
Sbjct: 66 VGSAEEAARKLGFLPQDTPMT---NLKVIDVVMLGRTPYLSGLKRPK--EEDYRAAMEAL 120
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+G++++A + F ELSGG++Q+V++AR PE++LLDEP + LD A+IE + +
Sbjct: 121 KEVGMEKMADRLFSELSGGERQKVMLARVFAQQPEIMLLDEPTAHLDIAAQIEIME-IVR 179
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVYGPASKAV 242
K + G I+ HD+N K++++ D +V G PE+V+ +E I V+G
Sbjct: 180 SKVEQGKAAIVAIHDINLASSFATKILMVKDGVVVYAGRPEDVITEESIRDVFGADVVVR 239
Query: 243 RVGERLY 249
+ G +Y
Sbjct: 240 KYGRGVY 246
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 133 bits (332), Expect = 2e-30
Identities = 80/224 (35%), Positives = 127/224 (55%), Gaps = 19/224 (8%)
Query: 13 MYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVR 72
++ V AV L+ ++K GE ++LLGP+G GKTT LR++AGL +G+I + + ++
Sbjct: 12 VFGEVTAVRELSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDRLVADP- 70
Query: 73 EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP----------QEVIKRGLEI 122
EK +VP + V LY ++ NI QE+ +R E+
Sbjct: 71 EKGIFVPPK-------DRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREV 123
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ LGL E+ + RELSGGQ+QRV + RA++ P++ L+DEPLS LD K R+ + L
Sbjct: 124 AELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELK 183
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K++ +G+T I THD + +GD++ +++R L GSP+EV
Sbjct: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEV 227
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 132 bits (330), Expect = 3e-30
Identities = 80/226 (35%), Positives = 127/226 (55%), Gaps = 12/226 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I ENL Y +AV G++FK+++GE LGPNGAGKTT + +L L G+ +V
Sbjct: 7 IIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIVA 66
Query: 65 G----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
G K EVR+K+ V F+ P ++ + +Y G I+ QE+ K+
Sbjct: 67 GHDVVKESREVRKKIGVV-------FQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIE 119
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E+L F+ L E + + SGG ++R+ IARAL+ PE+L LDEP LDP+ R
Sbjct: 120 ELLKFVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEY 179
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ +KE+ +T+ +TTH ++ ++ D++ +ID K++A G+ EE+
Sbjct: 180 IKTMKEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEEL 225
>pir||S75197 ABC-type transport protein slr2044 - Synechocystis sp. (strain PCC
6803) >gi|1652187|dbj|BAA17111.1| (D90903) ABC
transporter [Synechocystis sp.]
Length = 289
Score = 132 bits (329), Expect = 4e-30
Identities = 81/214 (37%), Positives = 120/214 (55%), Gaps = 5/214 (2%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VI ENL Y + +E + ++++ + L L+GPNG GKTTLL+VL GL QG + +
Sbjct: 22 VIAVENLFAGYGATPVLENINLRVEERDFLGLIGPNGGGKTTLLKVLLGLIQPQQGTVQI 81
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLI-HFNIPQEVIKRGLEI 122
G+S + R V YVPQ + P+ VLDVV MG L + L ++ E I R
Sbjct: 82 LGRSVEQGRRYVGYVPQWLEFDRAFPVRVLDVVRMGRLGRGKLFRRYHQQDEAIVR--RC 139
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
L+ +G+ ++ + LSGGQ+QRV IARAL S P++LLLDEP + +D K + L
Sbjct: 140 LEQVGMGDLGDRPLGTLSGGQRQRVYIARALASQPQILLLDEPTANVDSKVQRSIYELLG 199
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKL 216
++ + M I MI +HD+ + V ++R L
Sbjct: 200 ELNQTMTIVMI--SHDLGAISRYVKTVGCLNRSL 231
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 132 bits (329), Expect = 4e-30
Identities = 83/231 (35%), Positives = 131/231 (55%), Gaps = 14/231 (6%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y IE ENL + +AV G++FK+K+GE LGPNGAGKTT + +L L GK
Sbjct: 78 YAIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKAF 137
Query: 63 VFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
V G + EVR ++ V Q S++ R + +++ GG+Y + + +K
Sbjct: 138 VAGLDVVREAREVRRRIGIVFQDPSVD-RDLTAYENMLVHGGVY-------GLKGKELKE 189
Query: 119 GLE-ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+E +L F+ L E K + SGG ++R+ IAR+L+ +PE+L LDEP LDP+ R
Sbjct: 190 KIERLLKFVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHV 249
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR 227
S + +KE+ +T+ +TTH + ++ D+V +ID +++A GS EE+ R
Sbjct: 250 WSYIEAMKEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKR 300
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 132 bits (328), Expect = 5e-30
Identities = 80/215 (37%), Positives = 130/215 (60%), Gaps = 12/215 (5%)
Query: 18 KAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVR---EK 74
KAV G+ ++ GE + LLGP+G+GKTTLLRV+AGL +GKI G+ ++ +
Sbjct: 25 KAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEEITEGKIFYDGEDATDWSLEDRQ 84
Query: 75 VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGLKEIAKK 134
+ +V Q ++L F+ L+V D ++ G KK I ++ KR E+LD + L + +
Sbjct: 85 IGFVFQGYAL-FK-HLTVGDNIAFGPRMKKMDI------DIRKRVKELLDLVQLPGLESR 136
Query: 135 SFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMII 194
++LSGGQ+QR+ +ARAL P LLLLDEP ALDP+ R + ++L +I + +T ++
Sbjct: 137 FPQQLSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDLRNSLKRIISSLNLTSVM 196
Query: 195 TTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
THD E+ D+V++ ++ + GS E++ R+
Sbjct: 197 VTHDQEEAFEVADRVVVFNKGSIEQVGSLEDIYRN 231
>sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BINDING PROTEIN FECE HOMOLOG
>gi|1074938|pir||F64063 ATP-binding protein yfeB homolog
- Haemophilus influenzae (strain Rd KW20)
>gi|1573329|gb|AAC22020.1| (U32720) iron (chelated)
transporter, ATP-binding protein (yfeB) [Haemophilus
influenzae Rd]
Length = 306
Score = 131 bits (327), Expect = 7e-30
Identities = 81/251 (32%), Positives = 147/251 (58%), Gaps = 10/251 (3%)
Query: 5 IEAENLTIMYDSVK-AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
I ++T+ Y++ A+ +TF L G L+G NG+GK+TL + + GL QG+I +
Sbjct: 8 IWVNDVTVRYNNGHTAIHNMTFSLNSGTICALVGVNGSGKSTLFKSIMGLVKPQQGEIKL 67
Query: 64 FGKSPSEV--REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHF-NIPQEVIKRGL 120
S+ R VAYVPQ+ ++++ P+SV DVV MG + G ++F IP+ + K+ +
Sbjct: 68 CDLPISQALKRNLVAYVPQSEEVDWQFPVSVYDVVMMG---RYGYMNFLRIPKAIDKQKV 124
Query: 121 -EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E + + ++ +A + ELSGGQK+RV +ARAL ++LLDEP + +D K
Sbjct: 125 QEAMQRVNIEHLAHRQIGELSGGQKKRVFLARALAQQSPIILLDEPFTGVDVKTENAIVD 184
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPAS 239
L +++E+ G ++++TH++ + + D+V++I+R ++A G E+ + V+G
Sbjct: 185 LLQQLREE-GHLILVSTHNLGSVPDFCDQVVMINRTVIAAGKTEDTFNQHNLEIVFGGVL 243
Query: 240 KAVR-VGERLY 249
+ ++ +GE L+
Sbjct: 244 RHIKLLGENLH 254
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 131 bits (327), Expect = 7e-30
Identities = 85/231 (36%), Positives = 132/231 (56%), Gaps = 28/231 (12%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
+N+T ++ V AV L ++K GE ++LLGP+G GK+T LR++AGL T +G+I + K
Sbjct: 7 KNVTKVFGDVVAVNKLNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGEIWIGDKL 66
Query: 68 PSEV---REKVAYVPQTFSL--------NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
+++ + VA V Q ++L N PL M G+ K E I
Sbjct: 67 VNDIDPTKRNVAMVFQNYALYPHMTVFGNIEFPLK------MAGVPKS---------ERI 111
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+ EI DFLG+ ++ + ELSGGQ+QRV +ARAL+ PE+ LLDEPLS LD K R +
Sbjct: 112 KKVKEIADFLGIGDLLNRKPSELSGGQQQRVALARALVREPEVFLLDEPLSNLDAKIRTQ 171
Query: 177 ATSTLSK-IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEV 225
L K + D+ IT I THD + + D++ ++++ ++ G+P+E+
Sbjct: 172 MRFELKKLLSYDLKITTIYVTHDQVEAMTMADRIAVMNKGVIQQVGTPDEI 222
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 131 bits (326), Expect = 9e-30
Identities = 84/231 (36%), Positives = 136/231 (58%), Gaps = 17/231 (7%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y +E E ++ YDS +E + ++++GE LLGP+G+GKTT++R++AGL QG +
Sbjct: 4 YAVELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVR 63
Query: 63 VFGKSPSEV---REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK-- 117
+ G+ + + R V V Q +L L+V + V+ G +K IP+ IK
Sbjct: 64 INGEDCTSLPPYRRNVGMVFQNLALFPH--LNVFENVAYGLRLRK------IPEGEIKDR 115
Query: 118 --RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
R LE+++ L + AK+ +LSGGQ+QRV IARAL++ P +LLLDEPL ALD K R
Sbjct: 116 VYRYLELVN-LDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQ 174
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
S L +I++ +G T I THD + + + D++ +++ ++ G+P E+
Sbjct: 175 HMISELKRIQKTLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREI 225
>pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654969|gb|AAF93709.1| (AE004140) sulfate ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 376
Score = 131 bits (325), Expect = 1e-29
Identities = 81/225 (36%), Positives = 132/225 (58%), Gaps = 7/225 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I +N++ + +A+ L+ K++ GE + LLGP+G+GKTTLLR++AGL G I
Sbjct: 3 IRLDNISKHFGQFQALAPLSLKIEDGEMIGLLGPSGSGKTTLLRIIAGLEGADSGTIHFR 62
Query: 65 GKSPSEVR---EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
+ + V +V +V Q ++L FR ++V D V+ G + N P E+ KR +
Sbjct: 63 NRDVTNVHVRDRRVGFVFQNYAL-FR-HMTVADNVAFGLQVMERAQRPN-PAEIQKRVKQ 119
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+L+ + L +A + +LSGGQKQR+ +ARAL + PE+LLLDEP ALD K R E L
Sbjct: 120 LLEIVQLGHLAHRYPEQLSGGQKQRIALARALATQPEVLLLDEPFGALDAKVRKELRRWL 179
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ +++G T + THD + +E+ D+V+++ ++ SP E+
Sbjct: 180 RSLHDELGFTSVFVTHDQDEALELSDRVVVMSNGRIEQIDSPVEL 224
>pir||E71067 probable ferrichrome transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257652|dbj|BAA30335.1| (AP000005) 250aa
long hypothetical ferrichrome transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 250
Score = 130 bits (324), Expect = 2e-29
Identities = 84/255 (32%), Positives = 140/255 (53%), Gaps = 15/255 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
IE ENL ++ + + + F++ KG L++LGPNGAGKTTLLR +AG+ Y+G I V
Sbjct: 4 IEVENLKFSHNGREILHDINFEIDKGSFLIILGPNGAGKTTLLRCIAGI-LKYKGSIKVL 62
Query: 65 GK-----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
G S E+ + +AYVPQ F L V D V +G +K + N ++ +K
Sbjct: 63 GNDIKELSRIELAKLLAYVPQRIEPGF---LRVFDFVLLG---RKPYMGLNPGRKDLKAV 116
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+ L LG++ + + + LSGG+ Q+V IARA+ ++LLDEP + LDPK++IE
Sbjct: 117 EDALRLLGIQRLEDRIMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIEVME 176
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVYGPA 238
+ + + G T++ HD+ + G++ + + D + + EE L ++I+ + YG
Sbjct: 177 IIKDLVK-RGKTVVTVMHDLTLALRFGEEFLFLKDGRSTGLLTREE-LEEKILSETYGVK 234
Query: 239 SKAVRVGERLYCIIG 253
+ RV + ++G
Sbjct: 235 IRVARVEGEVIPLVG 249
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 130 bits (324), Expect = 2e-29
Identities = 82/229 (35%), Positives = 131/229 (56%), Gaps = 4/229 (1%)
Query: 3 YVIEAENLTIMY-DSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
Y++E ++L Y D ++G+ FK+KKGE + LLGPNGAGK+TL G+ +G++
Sbjct: 2 YIVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTKGEV 61
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP-QEVIKRGL 120
L+ GK ++ + V +T L F+ P + ++ G ++ +P +EV KR
Sbjct: 62 LIKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAPTVKEDVAFGPLNLGLPKEEVEKRVK 121
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E L +G++ K LSGGQK+RV IA L PE+++LDEP + LDP +
Sbjct: 122 EALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKIMKL 181
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLRD 228
L + + G+T+II+THDV+ + DKV ++ D K++ G+P+EV D
Sbjct: 182 LYDLNK-KGMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEVFSD 229
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 130 bits (324), Expect = 2e-29
Identities = 77/224 (34%), Positives = 131/224 (58%), Gaps = 9/224 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
++ + + + +V+A++G+ + +GE L+LLGP+G GKTTLLR +AGL GKI
Sbjct: 4 VKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKIFFN 63
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE-I 122
+ + + K + F P + V D ++ KK +P+E I++ ++
Sbjct: 64 DRDVTNLPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKK------VPKEEIEKRVKWA 117
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
D L + E+ + +LSGGQ+QRV +ARA++ PE+LL+DEPLS LD R++ S L
Sbjct: 118 ADLLHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELK 177
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K++E +G+T I THD + +GD++ ++++ KL G+P E+
Sbjct: 178 KLQERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEI 221
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 130 bits (323), Expect = 2e-29
Identities = 84/231 (36%), Positives = 141/231 (60%), Gaps = 16/231 (6%)
Query: 4 VIEAENLTIMYDSVK----AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQG 59
++E +++T + + K AV ++F GE L +LGPNGAGKTT LR++A ++ G
Sbjct: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
Query: 60 KILVFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
++LV G K+P EVR+++AY+ Q L PLSV D + +Y F+ ++
Sbjct: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLT--PPLSVRDYI----IYYFRFRGFS-KRDA 115
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
K +IL+ GLK A K +LS G K+RV +A AL S+ L+ LDEP + +DP+++
Sbjct: 116 KKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKR 175
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ + + ED G+T+I+T+HD+ + + D+V+++++ K+VA GSP+E+
Sbjct: 176 KTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
Length = 317
Score = 130 bits (323), Expect = 2e-29
Identities = 76/228 (33%), Positives = 129/228 (56%), Gaps = 13/228 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+E N+ Y K + L+ ++KGE ++LGP+G GK+TLL+++ G+ GKI++
Sbjct: 5 LELRNINKSYGKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQPDSGKIIID 64
Query: 65 GKSPSEV---REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
GK +++ + +A V Q ++L ++V D ++ + + HF + + +R E
Sbjct: 65 GKDVTKLPPNKRNIAMVFQNYALYPN--MNVFDNIA----FPLRMNHF---RNISRRVHE 115
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
LG++ + K ++SGGQ+QRV +ARA++ NP L LLDEPLS LD + R A + L
Sbjct: 116 TAQKLGIENLLDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSNLDARVRYAARNEL 175
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLRD 228
KI++++ T + THD +GD++ +L K GS EE+ D
Sbjct: 176 KKIQQELDQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEELYND 223
>gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 314
Score = 129 bits (322), Expect = 3e-29
Identities = 81/255 (31%), Positives = 145/255 (56%), Gaps = 19/255 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I + +T + S K ++ ++ ++KGE ++LG +G+GKTTLLR++AGL GKIL+
Sbjct: 1 MITLKEVTKFFGSFKVIDSISLNVEKGEFFVILGKSGSGKTTLLRLIAGLEKVSSGKILI 60
Query: 64 FGKSPSEV---REKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
+ +++ + + V Q+++L N +V +++ + + KK + +R
Sbjct: 61 SNEDVTDLPPSKRDIGMVFQSYALYPNKKVFENLMIALENSEINKK---------DKEER 111
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
+EI L + + K +LSGGQ+QRV IA+AL+ P++LL+DEPLS LD + R A
Sbjct: 112 IIEISKQLEIYHLMDKYPAQLSGGQQQRVAIAKALVKRPKVLLMDEPLSNLDVQLRYSAR 171
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV----LRDEIIGK 233
+ K++++ IT I THD N + I D++ +ID+ +L+ G PE++ L E+
Sbjct: 172 KLIKKVQKEFNITTIYVTHDSNEALAIADRIGVIDKGRLLQVGIPEDIYNNPLSKEVASL 231
Query: 234 VYGPASKAVRVGERL 248
V P V++ ++
Sbjct: 232 VGNPPMSFVKIDGKI 246
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 129 bits (322), Expect = 3e-29
Identities = 79/223 (35%), Positives = 122/223 (54%), Gaps = 5/223 (2%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E NLT YD AV+ ++ + KGE LLG +G GK+TLLR+LAG G+I++
Sbjct: 46 LLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIML 105
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
G S+V + + F P ++ GL + L E+ R E+L
Sbjct: 106 DGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPK----AEIASRVNEML 161
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ ++E AK+ +LSGGQ+QRV +AR+L P+LLLLDEP+ ALD K R +
Sbjct: 162 GLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVD 221
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
I E +G+T ++ THD + + ++ +++R K V G PEE+
Sbjct: 222 ILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEI 264
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 129 bits (321), Expect = 3e-29
Identities = 87/234 (37%), Positives = 131/234 (55%), Gaps = 21/234 (8%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I +NL + + A++ + + G+ + LLGP+G GKTTLLR++AGL GKIL
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGKILFD 62
Query: 65 GK--SPSEVRE-KVAYVPQTFSLNFRVPLSVLDVVSMGGLY-------KKGLIHFNIPQE 114
G+ + VRE KV +V Q ++L FR ++V D V+ G KG I +
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYAL-FR-HMNVFDNVAFGLTVLPKSERPSKGQIRAKVE-- 118
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
E+L + L +AK +LSGGQ+QR+ +ARAL P+LLLLDEP ALD K R
Sbjct: 119 ------ELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVR 172
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR 227
E + L I ++G+T I+ THD +E+ D++++++ K+ GS E + R
Sbjct: 173 KELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYR 226
>gb|AAD09976.1| (AF055088) ATP-binding cassette; PsaB [Streptococcus pneumoniae]
Length = 240
Score = 129 bits (320), Expect = 4e-29
Identities = 73/233 (31%), Positives = 136/233 (58%), Gaps = 3/233 (1%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I ENL++ Y A++ ++ L ++GPNGAGK+TLL+ + G+ +Q + +
Sbjct: 1 MIRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGI-IPHQMQAFL 59
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
K + ++AYV Q ++++ P+ V + VS+G L+ + ++ + K+ E L
Sbjct: 60 DDKEVKKSLHRIAYVEQKINIDYNFPIKVKECVSLG-LFPSIPLFRSLKAKHWKKVQEAL 118
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ +GL + A++ +LSGGQ QRV+IAR L+ + +LLDEP + +D + +TL
Sbjct: 119 EIVGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEPFAGIDSVSEEIIMNTLRD 178
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+K+ G T++I HD++ + D+V+L++R+++AFG EE + + + YG
Sbjct: 179 LKK-AGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTEETFTETNLKEAYG 230
>pir||G72750 probable ABC transporter ATP-binding protein APE0532 - Aeropyrum
pernix (strain K1) >gi|5104183|dbj|BAA79499.1|
(AP000059) 264aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 264
Score = 129 bits (320), Expect = 4e-29
Identities = 76/237 (32%), Positives = 135/237 (56%), Gaps = 14/237 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ E+LT+ Y+ + G+ + + + ++GPNGAGKTT L+ + GL +G++ +
Sbjct: 20 VRVEDLTVAYNGEPVLSGVNLEFRGPGLVQIIGPNGAGKTTFLKAILGLIKPARGRVFLD 79
Query: 65 GKS----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
G P V YVPQ S P++V + V L +G+ +R +
Sbjct: 80 GFEATGRPEMVGRYAGYVPQNPSAPKLSPMTVREFVETS-LRLRGVTRAR------ERAV 132
Query: 121 EILDFLGLK-EIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+L LG++ E+ + ELS G QRV IARA+ +P++L++DEPL+++DP R+E
Sbjct: 133 EVLHTLGIRGEVLESRLWELSMGMLQRVFIARAIAPDPKMLVMDEPLASVDPAGRMEIAR 192
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
++ + + +++T+HD + L+ D +++I+R L+A G PEEV R++++ +VYG
Sbjct: 193 IIAGLARER--LVLMTSHDPSLLLGHTDIIVVINRDLIASGPPEEVYREDVLRRVYG 247
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 128 bits (319), Expect = 6e-29
Identities = 79/232 (34%), Positives = 134/232 (57%), Gaps = 20/232 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
ME+VIE ++L +D +A++ ++F +K+GET LGP+GAGKTT +++L G ++ G+
Sbjct: 1 MEHVIEVKHLRKTFDGKEALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQVRSFDGE 60
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-----EV 115
+ +FGK ++ K F + VL GLY++ + N+ V
Sbjct: 61 VALFGKPVHRLKRKT----------FMSQIGVL--TDNSGLYERLTVQDNLSMYCKLYSV 108
Query: 116 IKRGL-EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
+R + ++L +GL++ K +LS G KQRVI+ARA++ P+LL LDEP SALDP +
Sbjct: 109 PERRIHDVLAEVGLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASS 168
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+L ++ + G T+ +TTHD+ +I D+V +D+ K+ +PE++
Sbjct: 169 HMIHDSLRRLNRE-GTTIFLTTHDMLEAEKICDRVAFLDQGKIRVMDTPEQL 219
>pir||T46652 ABC transporter ZurA [imported] - Listeria monocytogenes
>gi|5019734|gb|AAD37835.1|AF104349_1 (AF104349) ABC
transporter ZurA [Listeria monocytogenes]
Length = 257
Score = 127 bits (317), Expect = 1e-28
Identities = 81/232 (34%), Positives = 139/232 (59%), Gaps = 14/232 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M+ +IE N++ YD A+E + F++ KG L+GPNG+GK+T+L+++ G+ QG
Sbjct: 1 MKKIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKSTMLKLILGVLKKQQGS 60
Query: 61 ILVFGKSPSEVRE--KVAYVPQ-TFSLNFRVPLSVLDVVSMGGLYKKGLIHF--NIPQEV 115
I +FG+ ++ ++ K+ +V Q + + N P +V +VV+ G KKGL N +E
Sbjct: 61 ISLFGEKQADFKDWVKIGFVSQKSNAFNSAFPATVKEVVASGLTKKKGLFKTLNNKDKED 120
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALD---PK 172
I L+ ++ + + ++ ELSGGQ+QRV IARAL+S PELL+LDEP +D K
Sbjct: 121 IDYALKRVE---MTDYLHRNIGELSGGQQQRVFIARALVSRPELLILDEPTVGVDVENVK 177
Query: 173 ARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEE 224
A E + L++ +E +T+++ THD+ + + V+ I+++++ GS E
Sbjct: 178 AFYELLAELNRTEE---MTLLLVTHDLMAVNTYVNHVISINKRIIFDGSAHE 226
>pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226117|gb|AAF41290.1| (AE002440) sulfate ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 357
Score = 127 bits (316), Expect = 1e-28
Identities = 86/234 (36%), Positives = 130/234 (54%), Gaps = 21/234 (8%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I +NL + + A++ + + G+ + LLGP+G GKTTLLR++AGL G IL
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGNILFD 62
Query: 65 GK--SPSEVRE-KVAYVPQTFSLNFRVPLSVLDVVSMGGLY-------KKGLIHFNIPQE 114
G+ + VRE KV +V Q ++L FR ++V D V+ G KG I +
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYAL-FR-HMNVFDNVAFGLTVLPKSERPSKGQIRAKVE-- 118
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
E+L + L +AK +LSGGQ+QR+ +ARAL P+LLLLDEP ALD K R
Sbjct: 119 ------ELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVR 172
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR 227
E + L I ++G+T I+ THD +E+ D++++++ K+ GS E + R
Sbjct: 173 KELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYR 226
>pir||C71645 ferric transport ATP-binding protein (afuC) RP834 - Rickettsia
prowazekii >gi|3861360|emb|CAA15259.1| (AJ235273) FERRIC
TRANSPORT ATP-BINDING PROTEIN (afuC) [Rickettsia
prowazekii]
Length = 233
Score = 127 bits (315), Expect = 2e-28
Identities = 69/222 (31%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE N++ + + + ++F +KK L+GPNGAGKTT++R++ GL G++++
Sbjct: 5 IIEFRNVSKKFGNKTPISKVSFIVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEVII 64
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
K K+ YVPQ F L +P++V K + P K EI
Sbjct: 65 DRKL------KIGYVPQKFGLTTDIPITV-----------KKFLDLLAPSHFNKNIKEIS 107
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
F+ L+ I K+ +LSGGQ Q+V++A ++++NP+L++LDEPL +LD ++ E +
Sbjct: 108 SFIDLEHIKKQEISKLSGGQFQKVVLACSIINNPDLIILDEPLQSLDVTSQQEFYQLIHF 167
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEV 225
I++ + IT+ + +HD+ +I+ D+V+ ++ + G P E+
Sbjct: 168 IRKKLNITVFMISHDLFTVIKNSDQVICLNGHICCSGVPHEI 209
>sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0089
>gi|2127897|pir||A64311 ferric enterobactin transport
ATP-binding protein homolog - Methanococcus jannaschii
>gi|1498853|gb|AAB98070.1| (U67466) ferric enterobactin
transport ATP-binding protein [Methanococcus jannaschii]
Length = 254
Score = 127 bits (315), Expect = 2e-28
Identities = 77/238 (32%), Positives = 129/238 (53%), Gaps = 11/238 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ + + Y S + + + F++K+GE + +LG NGAGK+TLL+ + + +G IL+
Sbjct: 5 ILSVDGVEFAYKSRQILNNIKFEVKRGEVVSILGVNGAGKSTLLKCINKILKPKRGTILI 64
Query: 64 FGKSPS-----EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
E+ +KV YVPQ N+ ++V D V +G +K I + + I+
Sbjct: 65 DNFDIKNLDNLELAKKVGYVPQRAEGNY---MTVFDAVLLG---RKPHIKWEVSDRDIEI 118
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
++L L L++ A + ELSGG+ Q+VIIARAL+ P++LLLDEP + LD K ++E
Sbjct: 119 THKVLKLLNLEDYALRYTNELSGGELQKVIIARALVQEPQILLLDEPTNNLDLKNQLEVM 178
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+ I + I I+ HD+N + DK +++ ++ EV+ E I VYG
Sbjct: 179 KIIMDISKSQNIASIVVMHDLNLALRYSDKFIMLKDGVIYAEGGREVINPENIKAVYG 236
>sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|96440|pir||A40840 spermidine/putrescine transport
protein potA [validated] - Escherichia coli
>gi|147326|gb|AAC37038.1| (M64519) transport protein
[Escherichia coli] >gi|1651555|dbj|BAA35948.1| (D90748)
Spermidine/putrescine transport protein A [Escherichia
coli] >gi|1787370|gb|AAC74210.1| (AE000212) ATP-binding
component of spermidine/putrescine transport
[Escherichia coli K12]
Length = 378
Score = 126 bits (314), Expect = 2e-28
Identities = 75/227 (33%), Positives = 127/227 (55%), Gaps = 7/227 (3%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ + +D + + L + GE L LLGP+G GKTT+LR++AGL T G+I++
Sbjct: 17 LVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIML 76
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
+ + V + YV F P ++V + V+ G +K E+ R +E
Sbjct: 77 DNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQK-----TPAAEITPRVMEA 131
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
L + L+ A++ +LSGGQ+QRV IARA+++ P LLLLDE LSALD K R + + L
Sbjct: 132 LRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELK 191
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRD 228
++ +GIT + THD + + D+++++ D ++ G+P E+ +
Sbjct: 192 ALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 238
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 126 bits (314), Expect = 2e-28
Identities = 77/228 (33%), Positives = 134/228 (58%), Gaps = 13/228 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI-- 61
V++ E+L + + + G+ ++KKGE + ++GP+G+GK+TLLR + L +GKI
Sbjct: 3 VLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKIYF 62
Query: 62 ---LVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
L+ ++ + +R + V Q F N LSVL+ +++ + K + E +++
Sbjct: 63 KGELITHRNINRIRSSIGMVFQQF--NLFPHLSVLNNLTLAPMKVKNMQK----DEAVEK 116
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
++L+ +GL E + LSGGQ+QRV IARALM +PEL+L DEP SALDP+ E
Sbjct: 117 AKKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVL 176
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ + + G+TM+I TH++ ++ D+V+ +D ++V G PE++
Sbjct: 177 DVIKDLAQS-GMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKI 223
>gb|AAK43187.1| ABC transporter, ATP binding protein, putative [Sulfolobus
solfataricus]
Length = 291
Score = 126 bits (313), Expect = 3e-28
Identities = 80/234 (34%), Positives = 130/234 (55%), Gaps = 11/234 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VI+A NLT Y ++ + GLTF +++ L++GPNGAGK+TLL+++ GL G I V
Sbjct: 3 VIDAINLTKRYGDIEVLHGLTFSIEEKSITLVIGPNGAGKSTLLKIIGGLINRTSGYISV 62
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
G+ P + V F P L+V+D+V K+ F+ P KR LE
Sbjct: 63 LGEDPWNSNKIPRKVGIILDRPFLPPYLTVIDIV------KEVSSEFSYPLSDAKRLLE- 115
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
DF L K RELS G KQ++ I +L+ NPE+++ DEP + LD +R E +T +
Sbjct: 116 -DF-NLVHFMKNKVRELSAGTKQKLQIVFSLIKNPEIIIADEPTANLDITSRYEVYNTFA 173
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVA-FGSPEEVLRDEIIGKVY 235
++E MG+T++I++H ++ V+ I+ ++ FG +++LR+ + + Y
Sbjct: 174 VLREKMGLTVLISSHIPAEILAFSTHVLAINNGIMKFFGKVDKLLRNNFLEEFY 227
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 125 bits (312), Expect = 4e-28
Identities = 82/226 (36%), Positives = 129/226 (56%), Gaps = 14/226 (6%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
EN++ Y + AV L ++ GE L L+GP+G+GKTT LR++ L +G++L+ G+
Sbjct: 12 ENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLINGQD 71
Query: 68 PSEV-----REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
SE+ R + YV Q L + V GL K + +++ +R E+
Sbjct: 72 ISEIDAVRLRRNIGYVIQQIGL-----FPHMKVWENIGLIPK--LEGWEEEKIRQRVDEL 124
Query: 123 LDFLGLK-EIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L + L E A++ +LSGGQ+QRV +ARAL NP LLL+DEP ALDP R +
Sbjct: 125 LKLVDLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEF 184
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
++IKE++G T++ THDV +GD++ +++ +LV G PEE++
Sbjct: 185 ARIKEELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELI 230
>gi|11498429 branched-chain amino acid ABC transporter, ATP-binding protein
(braG-2) [Archaeoglobus fulgidus]
>gi|7445760|pir||G69352 branched-chain amino acid ABC
transporter, ATP-binding protein (braG-2) homolog -
Archaeoglobus fulgidus >gi|2649778|gb|AAB90412.1|
(AE001047) branched-chain amino acid ABC transporter,
ATP-binding protein (braG-2) [Archaeoglobus fulgidus]
Length = 248
Score = 125 bits (312), Expect = 4e-28
Identities = 76/242 (31%), Positives = 140/242 (57%), Gaps = 11/242 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ E + I + + A+ +TF+++KGE L ++GPNGAGKTTL V++GL+ +G I+
Sbjct: 1 MLKVEGVGIRFGGLIALNNVTFEIRKGEVLGIIGPNGAGKTTLFNVISGLYKPDEGVIIF 60
Query: 64 FGKSPSE------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGL---IHFNIPQE 114
GK+ + VR ++ QT SL F +P ++++ Y+ G+ + E
Sbjct: 61 EGKNITTMPPHKIVRLGISRTFQTVSLYFNLPAIGNLLITLTAWYRSGVLSALREENGDE 120
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
K +E+L+F+GL E A + L ++R+ IA AL + P+LLLLDEP + L+ +
Sbjct: 121 TFKEAMELLNFVGLDEKAFTPVKNLPQEAQRRLSIAIALATKPKLLLLDEPTAGLNLEET 180
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGK 233
+ +KE G+T+ I H + ++ + D+++++D +++A GSP+E++ +E + K
Sbjct: 181 DRILEIIRTLKE-RGVTVAIIEHKMRFIMGVSDRIVVLDSGEIIAEGSPKEIVENERVIK 239
Query: 234 VY 235
Y
Sbjct: 240 AY 241
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 125 bits (312), Expect = 4e-28
Identities = 79/229 (34%), Positives = 136/229 (58%), Gaps = 15/229 (6%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+E +L + ++ ++G+T K++KGE ++++GP+G+GK+TLLR + L GKIL+
Sbjct: 4 LEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKILLD 63
Query: 65 GKSPS-------EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
G + +VR+++ V Q F N L+ L V++ + K + +E +
Sbjct: 64 GVDITNSKIDINKVRQRIGIVFQQF--NLFPHLTALQNVTLAPIKIKKMSK----REAEE 117
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
G+ +L+ +GL++ A +LSGGQ+QRV IARAL NPE++L DE SALDP+ E
Sbjct: 118 LGMRLLEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEV 177
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEV 225
+ ++ D G+TM++ TH++ E+GD+V+ +D +V G PE++
Sbjct: 178 LDVMKQLARD-GMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQI 225
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 125 bits (312), Expect = 4e-28
Identities = 77/224 (34%), Positives = 129/224 (57%), Gaps = 9/224 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
++ ENLT + + AV L +K GE L+LLGP+G GKTT LR++AGL +G+I
Sbjct: 13 VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFG 72
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLEI 122
+ + + K + F P ++V + ++ KK P+ E+ KR
Sbjct: 73 DRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKK------FPKDEIDKRVRWA 126
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ L ++E+ + +LSGGQ+QRV +ARA++ P++LL+DEPLS LD K R+ + +
Sbjct: 127 AELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIK 186
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K+++ + +T I THD + +GD++ +++R +L+ GSP EV
Sbjct: 187 KLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEV 230
>gb|AAD56937.1|AF180520_2 (AF180520) ATP-binding protein MtsB [Streptococcus pyogenes]
Length = 241
Score = 125 bits (312), Expect = 4e-28
Identities = 71/234 (30%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 4 VIEAENLTIMYD-SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
+I NL + YD + A+E + ++ + ++GPNGAGK+T ++ + L +YQG +
Sbjct: 1 MITTNNLCVTYDGNSNALEAINVTIEGPSIVGIIGPNGAGKSTFMKAILNL-IDYQGHVT 59
Query: 63 VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
V GK ++ VAYV Q +++ P++V + V++G K GL + ++ ++ ++
Sbjct: 60 VDGKDGRKLGHTVAYVEQRSMIDYNFPITVKECVALGTYSKLGLFR-RVGKKQFEQVDKV 118
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
L +GL++ + + LSGGQ QR+++AR L+ + + LDEP +D + L
Sbjct: 119 LKQVGLEDFGHRPIKSLSGGQFQRMLVARCLIQESDYIFLDEPFVGIDSVSEKIIVDLLK 178
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
++K G T++I HD++ + DK+M++++ LVA+G+ EV + + K YG
Sbjct: 179 ELKM-AGKTILIVHHDLSKVEHYFDKLMILNKHLVAYGNVCEVFTVDTLSKAYG 231
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 125 bits (312), Expect = 4e-28
Identities = 80/236 (33%), Positives = 139/236 (58%), Gaps = 18/236 (7%)
Query: 1 MEYVIEAENLTIMYDS----VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTN 56
M YV + EN+ Y+ V+ + GL +++KGE +++LGP+G GKTT+L+++AGL
Sbjct: 2 MSYV-KLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQ 60
Query: 57 YQGKILVFGKSPSEVREK---VAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIP 112
+G + + G+ ++ K VA VPQ +++ P +SV D ++ + ++H +
Sbjct: 61 DKGHVYLRGEVVDDLPPKDRRVAMVPQNYAI---YPFMSVYDNIA----FPLKVMHLS-K 112
Query: 113 QEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPK 172
E+ KR LE+ L + + ++ +LSGGQ QRV IARAL+ +++L+DEPLS LD +
Sbjct: 113 DEIKKRVLEVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQ 172
Query: 173 ARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLR 227
R+ A L +++ D+ T+I THD + + KV ++ D + A+G P E+ +
Sbjct: 173 VRVVAREELKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYK 228
>pir||D75609 amino acid ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460517|gb|AAF12223.1|AE001862_49 (AE001862) amino
acid ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 309
Score = 125 bits (312), Expect = 4e-28
Identities = 81/234 (34%), Positives = 132/234 (55%), Gaps = 19/234 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE +N+ + ++ ++ + GE ++L+GP+G GK+TLLR++ L G I V
Sbjct: 1 MIEFQNVIKSFGGPAVLQDISLTVPTGELVILIGPSGCGKSTLLRLVNRLLEPTSGDIRV 60
Query: 64 FGKS-----PSEVREKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G S P +R ++ YV Q+ L + V +V V S+ G+ + +
Sbjct: 61 GGVSVLEQDPVALRRRLGYVIQSVGLFPHLTVQENVELVPSISGVGR---------ETRA 111
Query: 117 KRGLEILDFLGLK--EIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
R LE+L +GL+ + A + R+LSGGQ+QRV IARAL ++PE LL+DEP SALDP R
Sbjct: 112 ARALELLSLMGLEPGQYAGRYPRQLSGGQQQRVGIARALAADPEYLLMDEPFSALDPITR 171
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEVLR 227
+K ++G T++ THDV+ + +GD++ ++ V + +PEE+LR
Sbjct: 172 ARLQEQFLTLKREIGKTIVFVTHDVDEAVRLGDRICVLGNGTVQQYAAPEEILR 225
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 125 bits (311), Expect = 5e-28
Identities = 76/232 (32%), Positives = 133/232 (56%), Gaps = 19/232 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M +VIE +T Y +K +E + K+++GETL ++GP GAGK+TLLR++ L G+
Sbjct: 1 MMHVIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGE 60
Query: 61 ILVFGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
IL G++ P EVR ++ V Q + FR V+ LY + +
Sbjct: 61 ILFMGENVDDLKPLEVRRRMGMVFQNTPV-FR------GTVAESILYGPRIRGERPHESE 113
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
+K ++L+ +GLK + ELSGG++QR+ +A+ L++ PE++LLDE S+LDP +R
Sbjct: 114 VK---DVLETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISR- 169
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLR 227
S + + ++ +T+I TTHD+ ++ D++ +++R ++ G P E+ +
Sbjct: 170 ---SRMEDVIAELDVTVIFTTHDLLQGQKLADRIAILNRSILQTGEPREIFK 218
>gi|7524830 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023607|sp|P56344|CYSA_CHLVU PROBABLE SULFATE
TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|7442559|pir||T07260 sulfate transport ATP-binding
protein - Chlorella vulgaris chloroplast
>gi|2224423|dbj|BAA57907.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 125 bits (310), Expect = 7e-28
Identities = 74/227 (32%), Positives = 132/227 (57%), Gaps = 21/227 (9%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
EN++ + S +A++ + ++K G + LLGP+G+GK+TLLRVLAGL G+I + G+
Sbjct: 6 ENISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQD 65
Query: 68 PSEVR---EKVAYVPQTFSLNFRVPLSV-----LDVVSMGGLYKKGLIHFNIPQEVIKRG 119
++++ ++ +V Q ++L + +S L++ + L KK KR
Sbjct: 66 ATQMKLQDREIGFVFQNYALFPHLTVSENVAFGLEIQKIDSLLKK------------KRV 113
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+L + L++ +LSGGQ+QRV +ARAL P++LLLDEP +ALD K R + S
Sbjct: 114 NELLKLMQLEKFGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRS 173
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
L ++ + +T + THD + +E+ +++L++ K++ GS +E+
Sbjct: 174 WLRELHHKISVTTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQEL 220
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 125 bits (310), Expect = 7e-28
Identities = 78/223 (34%), Positives = 130/223 (57%), Gaps = 12/223 (5%)
Query: 8 ENLTIMYDS-VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK 66
EN+T +Y++ V AV+ ++ E ++LLGP+G GKTT LR++AGL GKI + GK
Sbjct: 9 ENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITDGKIYIDGK 68
Query: 67 SPSEVREK---VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
++V K +A V Q ++L ++V + ++ G +K E+ +R E
Sbjct: 69 VVNDVEPKDRDIAMVFQNYAL--YPHMTVYENMAFGLKLRK-----YPKDEIDRRVREAA 121
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
LG++ + + R+LSGGQ+QRV + RA++ NP++ L DEPLS LD K R++ S L K
Sbjct: 122 KILGIENLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSELKK 181
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEV 225
+ + T+I THD + + DK++++ D ++ G+P E+
Sbjct: 182 LHHRLQATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEI 224
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 125 bits (310), Expect = 7e-28
Identities = 73/216 (33%), Positives = 127/216 (58%), Gaps = 10/216 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I +N++ + KA+ + +++GE L +LGP+G GK+TLLR++AGL + G I++
Sbjct: 4 ISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDIVIA 63
Query: 65 GKSPSEV---REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
GK + + K+ +V Q F+L L+V V+MG +K E+ +R +
Sbjct: 64 GKQVTNDPVWKRKIGFVFQNFAL--WPHLTVFKNVAMGLELRK-----TPKDELQQRVTK 116
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L + L+ +A + +LSGGQ+QRV +ARA++ P++LLLDEPLSALD R + L
Sbjct: 117 ALRMVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQVEL 176
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV 217
++ +G+T + THD + + D+V++++R ++
Sbjct: 177 KALQRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVI 212
>pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1000120|gb|AAB41280.1| (U32936) orf 363
[Synechocystis PCC6803] >gi|1653830|dbj|BAA18741.1|
(D90916) ATP binding protein responsible for multiple
sugar import [Synechocystis sp.]
Length = 363
Score = 124 bits (309), Expect = 9e-28
Identities = 77/240 (32%), Positives = 131/240 (54%), Gaps = 28/240 (11%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ E +T +D AV L +++ GE L+ +GP+G GKTT LR+LAGL T QG+I +
Sbjct: 4 VSFEQVTKQFDDYVAVNNLNLEIEDGEFLVFVGPSGCGKTTSLRLLAGLETVSQGQICIG 63
Query: 65 GKSPSEVREK---VAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
+ +E+ K +A V Q+++L + V ++ + + G K +E+ +R
Sbjct: 64 DRRVNELSPKDRDIAMVFQSYALYPHMSVYENMAFSLDLQGKPK---------EEIRQRV 114
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+ LG++++ + +ELSGGQ+QRV + RA++ P + L+DEPLS LD R++A
Sbjct: 115 CSAAELLGIEKLLHRKPKELSGGQRQRVAVGRAIVRKPSVFLMDEPLSNLDAMLRVQARK 174
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPAS 239
+SK+ D+ T I THD + +GD++ V++D I+ +V PA+
Sbjct: 175 EISKLHSDLATTFIYVTHDQVEAMTMGDRI--------------AVMKDGILQQVDSPAN 220
>gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 324
Score = 124 bits (309), Expect = 9e-28
Identities = 75/216 (34%), Positives = 121/216 (55%), Gaps = 16/216 (7%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+E ++ Y + G+T K++ GE ++LGP+G GK+TLL++LAG+ +GKI+
Sbjct: 3 VELIDIVKKYGKNIVINGITEKIETGEFFVILGPSGEGKSTLLKILAGIEKLDKGKIIAD 62
Query: 65 GKS----PSEVREKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
G P E R VA V Q ++L N V ++ + M G+ K +E+I+R
Sbjct: 63 GADITDKPPEKRN-VAMVFQNYALYPNMSVRDNIAFPLKMRGMKK---------EEIIER 112
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
+ LG+ EI K ++SGGQ+QRV +ARA++ NP LLDEPLS LD + R A
Sbjct: 113 VEKAAKLLGISEILDKKVTQISGGQQQRVALARAIVRNPSYFLLDEPLSNLDARVRTTAR 172
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR 214
L +I++++ T I THD + + D++ ++ +
Sbjct: 173 GELKRIQKELKGTFIYVTHDQKEALSLADRIAILHK 208
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 124 bits (309), Expect = 9e-28
Identities = 79/236 (33%), Positives = 134/236 (56%), Gaps = 15/236 (6%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I+A NLT + AV+ + F++ +GE LGPNGAGK+T +++L + +G V
Sbjct: 12 IKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 65 G----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK-RG 119
G K P+ VR+ + VPQ ++ + + +++ M GLY IP+ + + R
Sbjct: 72 GYDVIKQPALVRQSIGVVPQEYTADEDLT-GWENMMMMAGLY-------GIPKRIAEERA 123
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+L+ + L AK+ SGG ++R+ IA +L+S P +L LDEP LD + R
Sbjct: 124 KELLEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQ 183
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKV 234
+ K+KE+ +T+ +TTH + GD++ +ID+ K++A GSP+E L++++ G V
Sbjct: 184 YIMKLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKE-LKEKVGGDV 238
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 124 bits (309), Expect = 9e-28
Identities = 77/224 (34%), Positives = 127/224 (56%), Gaps = 9/224 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ ENLT + + AV L +K GE L+LLGP+G GKTT LR++AGL +GKI
Sbjct: 4 VRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKIYFG 63
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLEI 122
+ + + + + F P ++V D ++ KK P+ E+ KR
Sbjct: 64 DREVTYLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKIKK------FPRDEIDKRVRWA 117
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ L ++E+ + +LSGGQ+QRV +ARA++ P++LL+DEPLS LD K R+ + +
Sbjct: 118 AELLQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIK 177
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K+++ + +T I THD + +GD++ +++R +L+ G P EV
Sbjct: 178 KLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEV 221
>gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [Streptococcus
pyogenes]
Length = 296
Score = 124 bits (309), Expect = 9e-28
Identities = 84/242 (34%), Positives = 141/242 (57%), Gaps = 18/242 (7%)
Query: 1 MEYVIEAENLTIMY--DSVK-AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY 57
M +IE + +T Y D K ++G++F +K+GE L ++G NG+GK+T +R++ GL
Sbjct: 18 MSAIIELKKVTFNYHKDQEKPTLDGVSFHVKQGEWLSIIGHNGSGKSTTIRLIDGLLEPE 77
Query: 58 QGKILVFGKSPS-----EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP 112
G I+V G + E+R K+ V Q F V +V D V+ G L KG+ H +I
Sbjct: 78 SGSIIVDGDLLTITNVWEIRHKIGMVFQNPDNQF-VGATVEDDVAFG-LENKGIAHEDIK 135
Query: 113 QEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPK 172
+ V L+ +G++ +K LSGGQKQRV IA A+ P++++LDE S LDPK
Sbjct: 136 ERVN----HALELVGMQNFKEKEPARLSGGQKQRVAIAGAVAMKPKIIILDEATSMLDPK 191
Query: 173 ARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLR--DE 229
R+E T+ I++D +T+I THD++ + + D+V+++ D ++ + +PE++ DE
Sbjct: 192 GRLELIKTIKNIRDDYQLTVISITHDLDE-VALSDRVLVMKDGQVESTSTPEQLFARGDE 250
Query: 230 II 231
++
Sbjct: 251 LL 252
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 124 bits (309), Expect = 9e-28
Identities = 79/236 (33%), Positives = 134/236 (56%), Gaps = 15/236 (6%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I+A NLT + AV+ + F++ +GE LGPNGAGK+T +++L + +G V
Sbjct: 12 IKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 65 G----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK-RG 119
G K P+ VR+ + VPQ ++ + + +++ M GLY IP+ + + R
Sbjct: 72 GYDVIKQPALVRQSIGVVPQEYTADEDLT-GWENMMMMAGLY-------GIPKRIAEERA 123
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+L+ + L AK+ SGG ++R+ IA +L+S P +L LDEP LD + R
Sbjct: 124 KELLEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQ 183
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKV 234
+ K+KE+ +T+ +TTH + GD++ +ID+ K++A GSP+E L++++ G V
Sbjct: 184 YIMKLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKE-LKEKVGGDV 238
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 124 bits (309), Expect = 9e-28
Identities = 75/233 (32%), Positives = 130/233 (55%), Gaps = 16/233 (6%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E +I+ +T YD AV+ L+ ++KGE LLGPNGAGKTT + ++ GL G +
Sbjct: 3 EAIIKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTV 62
Query: 62 LVFG----KSPSEVREKVAYVPQT--FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
V G K P EV+ KV Y+P F + ++L S+ G+ K E
Sbjct: 63 QVAGIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKI---------EA 113
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
I+R +L+ +GL E AKK + S G KQR+ +A LM PE+++LDEP +DP+
Sbjct: 114 IERANTLLEKVGLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVR 173
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLR 227
+ + + ++ +T+++ +H ++ + ++ D+V + +D KL+A+G +++++
Sbjct: 174 DFLHLIRNLNQNENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVK 226
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 124 bits (308), Expect = 1e-27
Identities = 76/232 (32%), Positives = 126/232 (53%), Gaps = 25/232 (10%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I+ EN+ + + A+ + K+K GE + LLGP+G+GK+TLL +AG++ GKI
Sbjct: 4 IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFD 63
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP----------QE 114
K +E+ K V F LY ++ NI +E
Sbjct: 64 EKDVTELPPKDRNVGLVFQ--------------NWALYPHMTVYKNIAFPLELRKAPREE 109
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
+ K+ E+ L + ++ + +LSGGQ+QRV IARAL+ PE+LLLDEPLS LD R
Sbjct: 110 IDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLR 169
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEV 225
+E + L ++++++GIT + THD + + D++ +I + +++ G+P+EV
Sbjct: 170 LEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEV 221
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 123 bits (307), Expect = 1e-27
Identities = 73/224 (32%), Positives = 128/224 (56%), Gaps = 9/224 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ E + + A++G+ ++K GE ++LLGP+G GKTT LR++AGL G++
Sbjct: 6 VRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRVYFD 65
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLEI 122
G+ + + K V F P + V D ++ KK +P+ E+++R
Sbjct: 66 GRDVTGLPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKK------LPRDEIVRRVRWA 119
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ L + + + +LSGGQ+QRV +ARA+++ PE+LL+DEPLS LD RI+ S +
Sbjct: 120 AELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIK 179
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEV 225
K++ +G+TMI THD + IGD++++++ ++ G+P +V
Sbjct: 180 KLQRRLGVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDV 223
>gi|11467821 probable transport protein [Nephroselmis olivacea]
>gi|5880750|gb|AAD54843.1|AF137379_66 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 343
Score = 123 bits (307), Expect = 1e-27
Identities = 72/222 (32%), Positives = 133/222 (59%), Gaps = 11/222 (4%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
EN++ + + +A++ + ++K G + L+GP+G+GK+TLLR++AGL +GKI + G+
Sbjct: 6 ENISKTFGTFRALDHVNLEVKAGSLVALVGPSGSGKSTLLRMIAGLERADEGKIWLAGRD 65
Query: 68 PSEV---REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILD 124
+ + + +V Q ++L F+ L+V +S G ++ P ++ R ++L
Sbjct: 66 ATYAPIQKRHIGFVFQNYAL-FK-HLNVAKNISFGLEVRQAN-----PNQIRSRVRDLLQ 118
Query: 125 FLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKI 184
+ L+ +A + +LSGGQ+QRV +ARAL P++LLLDEP ALD + R E S L +
Sbjct: 119 LIQLEHMADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDARVRRELRSWLRDL 178
Query: 185 KEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
++M +T + THD +E+ ++++ ++ +L GSP+E+
Sbjct: 179 HQEMPVTTVFVTHDQQEAMEVAHEIVVFNQGRLEQVGSPQEI 220
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 123 bits (306), Expect = 2e-27
Identities = 80/242 (33%), Positives = 136/242 (56%), Gaps = 20/242 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ AENL Y S K V ++ + E + LLGPNGAGKTT ++ GL QGKI++
Sbjct: 3 ILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKIVI 62
Query: 64 FGKSPS------EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
G+ S + + Y+PQ S+ R L+V + + +K L PQ+ +
Sbjct: 63 DGEDISLLPMHNRAQRGIGYLPQEASIFRR--LTVYENLMAVLEIRKDL----TPQQRRE 116
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+ E+++ + I + LSGG+++RV IARAL +NP+ +LLDEP + +DP +
Sbjct: 117 KADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDP----IS 172
Query: 178 TSTLSKIKEDM---GITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGK 233
S + KI D+ G+ ++IT H+V +++ ++ ++ K++A G+PE+V+ DE + +
Sbjct: 173 VSDIKKIITDLRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQVMNDEQVKR 232
Query: 234 VY 235
VY
Sbjct: 233 VY 234
>dbj|BAB05306.1| (AP001512) iron(III) dicitrate transport system (permease)
[Bacillus halodurans]
Length = 491
Score = 123 bits (306), Expect = 2e-27
Identities = 78/242 (32%), Positives = 138/242 (56%), Gaps = 15/242 (6%)
Query: 4 VIEAENLTIMYDS-VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
+++A+N+++ YD ++ L+F++ KGE +LGPNG+GKTTLL+ ++GL + +G I
Sbjct: 1 MLDAQNVSVGYDEKTPIIQQLSFQVHKGEIFGILGPNGSGKTTLLKAVSGLLSPSEGTIT 60
Query: 63 VFGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-YKKGLIHFNIPQE-- 114
+ GK+ E+ +K+A +PQT F V +VV++G ++KG + ++
Sbjct: 61 LHGKAIADYHSKELAQKMAVLPQTADTAFAY--KVKEVVALGRYPHQKGWLASESQEDER 118
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
VI+ +E D + K + LSGG++QR ++ARAL P+LLLLDEP + LD +
Sbjct: 119 VIREAMEQTDTWKFRN---KPLQTLSGGERQRALLARALCQEPDLLLLDEPTNHLDISHQ 175
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGK 233
++ L +T++ HD+N D+V+L++ ++V SP +V+ + +
Sbjct: 176 MQLLDALKDWTRTRQLTVVAILHDLNMASLYCDRVLLLNEGRMVDLNSPRQVMTEHQLAN 235
Query: 234 VY 235
VY
Sbjct: 236 VY 237
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 123 bits (306), Expect = 2e-27
Identities = 76/227 (33%), Positives = 132/227 (57%), Gaps = 11/227 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I E + + V AV+ + +K GE +LLGP+G GKTT LR++AGL +G+IL+
Sbjct: 17 IRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRILID 76
Query: 65 G-----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
G K P + VA V Q ++L +SV D ++ ++ + ++ +R
Sbjct: 77 GEDVTFKDPKD--RNVAMVFQNYALYPH--MSVFDNIAFTLHLRRKEMGLT-KDDIRRRV 131
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+E+ L ++++ + +LSGGQ+QRV +ARAL+ P++ L+DEPLS LD R+ +
Sbjct: 132 IEVAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRLAMRA 191
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
L K+++D+ IT + THD + + D++ ++++ ++V G+PEEV
Sbjct: 192 ELKKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEV 238
>sp|Q57243|YC72_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1272
>gi|1074079|pir||F64113 ferric enterobactin transport
ATP-binding protein homolog HI1272 - Haemophilus
influenzae (strain Rd KW20) >gi|1574727|gb|AAC22920.1|
(U32807) ABC transporter, ATP-binding protein
[Haemophilus influenzae Rd]
Length = 263
Score = 123 bits (305), Expect = 3e-27
Identities = 81/239 (33%), Positives = 133/239 (54%), Gaps = 12/239 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E +NL I Y+ V+ + F L++ + LLG NGAGK+T L+ L GL G I+
Sbjct: 11 LLETQNLAIGYEGKTLVQHIQFTLEENQICCLLGANGAGKSTFLKTLLGLQPPIGGDIVW 70
Query: 64 FGK-----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV-IK 117
GK SP+E+ +AYVPQ S F P V D+V MG L + P++ +
Sbjct: 71 QGKSLSDYSPTELARHIAYVPQAHSHLF--PFLVQDMVMMG--RSAFLKWYQTPKKSDLD 126
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
L L L + +A++ + +LSGG+KQ V+IARA+ +LL++DEP S+LD +I
Sbjct: 127 LALMALQELEIAHLAQRYYHQLSGGEKQLVLIARAIAQQAKLLIMDEPTSSLDFGNQIRV 186
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKL-VAFGSPEEVLRDEIIGKVY 235
+ ++++ I +II+TH+ +GD ++L+D++ G + +L E + K+Y
Sbjct: 187 LEKIKQLQK-QNIALIISTHNPQQAAFLGDNIVLLDQQFGFQQGDKKHLLTLENLAKIY 244
>pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106344|gb|AAF84156.1|AE003966_17 (AE003966) sulfate
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 348
Score = 123 bits (305), Expect = 3e-27
Identities = 78/226 (34%), Positives = 130/226 (57%), Gaps = 9/226 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I + L ++ A+ G+ +++GE L LLGP+G+GKTTLLR++AGL G++L F
Sbjct: 3 IRIQELCKQFEDFTALAGIDLDIRQGELLALLGPSGSGKTTLLRIIAGLEHADAGRVL-F 61
Query: 65 GKSPSEVRE----KVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
G + + +V +V Q ++L F+ +SV + V+ G ++G + Q + R
Sbjct: 62 GDEDATMMSVQARRVGFVFQHYAL-FK-HMSVYENVAFGLRVRRGKARWPESQ-ISARVF 118
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E+L + L + ++ +LSGGQ+QRV +ARAL P +LLLDEP ALD + R +
Sbjct: 119 ELLSLVQLDGLEQRYPMQLSGGQRQRVALARALAIEPRVLLLDEPFGALDAQVRRDLRRW 178
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
L +I + G+T + THD +E+ D+V ++++ ++ SP EV
Sbjct: 179 LREIHDRTGLTTVFVTHDQEEALELADRVAILNQGRIEQVASPAEV 224
>pir||E82120 zinc ABC transporter, ATP-binding protein VC2082 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9656630|gb|AAF95228.1| (AE004282) zinc ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 262
Score = 123 bits (305), Expect = 3e-27
Identities = 70/240 (29%), Positives = 130/240 (54%), Gaps = 18/240 (7%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M +IE +++ + ++ + ++ + L KG L+GPNGAGK+TL++V+ GL + GK
Sbjct: 1 MAILIELQDICVDFEQRRVLDNIRLTLTKGNITTLIGPNGAGKSTLVKVILGLQSLSSGK 60
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
I+ S +R + YVPQ LN +PL+V + + G + QE+
Sbjct: 61 II----RQSGIR--IGYVPQKLKLNDTLPLTVNRFLKLAGRFST--------QELS---- 102
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E L +G + + +LSGG+ QRV++ARAL+ P+LL+LDEP +D + +I+
Sbjct: 103 EALRLVGGEHLQSSDMHKLSGGETQRVLLARALLQRPDLLVLDEPAQGVDVQGQIDLYDL 162
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASK 240
+ ++ G +++ +HD++ ++ D+V+ + + GSPE + + ++G S+
Sbjct: 163 IHTLRNRFGCAVLMVSHDLHLVMAKTDEVICLQHHVCCSGSPESIAKHPSYLAMFGHRSR 222
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 122 bits (304), Expect = 3e-27
Identities = 77/224 (34%), Positives = 123/224 (54%), Gaps = 12/224 (5%)
Query: 7 AENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK 66
A+ T V+AV G+ F + GE + LGPNGAGKTT +R+L L G ++ G+
Sbjct: 8 AKTFTTKQGPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSGTAVIAGR 67
Query: 67 S----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
P++VR + YV Q P+ D+V G LY E R E+
Sbjct: 68 DLLHEPAKVRTHIGYVSQAGGAKPSSPVR-RDLVLQGRLYGMSR------SEAEARADEV 120
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ LGL+E+A + + LSG Q +RV +A LM PELL LDEP + LDP++R + +
Sbjct: 121 ITQLGLEELADRIIQTLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIR 180
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+++++ G T+ +TTH ++ + D+V++ID+ +++A SP +
Sbjct: 181 RLRDERGTTVFLTTHYLDEADSLCDRVLIIDKGRIIAEDSPRSL 224
>pir||E69812 ferrichrome ABC transporter (ATP-binding p) homolog yfmF - Bacillus
subtilis >gi|2443249|dbj|BAA22320.1| (D86417) YfmF
[Bacillus subtilis] >gi|2633073|emb|CAB12578.1| (Z99108)
similar to ferrichrome ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 266
Score = 122 bits (304), Expect = 3e-27
Identities = 81/240 (33%), Positives = 131/240 (53%), Gaps = 13/240 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ A+ LT+ YDS ++G+ K+++G+ L+G NG GK+T+L+ LA L G +L+
Sbjct: 4 LAADQLTLSYDSTVIIDGVDLKIEEGKITALIGANGCGKSTILKSLARLMAPKSGTVLLE 63
Query: 65 GKS----PS-EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLI--HFNIPQEVIK 117
GK PS EV +K+A +PQ S L+V ++ G K L+ H ++++
Sbjct: 64 GKDIHRQPSKEVAKKLAILPQ--SPQAPEGLTVEELCYFGRHPHKKLLSKHTQEDHDMVE 121
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
LE + LK+ ++ LSGGQ+QR I+ AL +LLLLDEP + LD +IE
Sbjct: 122 WALEATGMIELKD---RTLDALSGGQRQRAWISMALAQGTDLLLLDEPTTYLDISHQIEV 178
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGD-KVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
L K+ D G T+++ HD+N + D + ++D K+ G+PE+V +V+G
Sbjct: 179 LELLKKLNRDHGRTVVMVLHDLNQAAQYADYLISVLDGKIYNAGTPEDVFTQPFFREVFG 238
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 122 bits (304), Expect = 3e-27
Identities = 81/229 (35%), Positives = 126/229 (54%), Gaps = 5/229 (2%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M VIEA NLT Y + AV G+TF + +GE LGPNGAGKTT +R+L G+ G+
Sbjct: 4 MNVVIEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQ 63
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
+ V G + EK+ Q + + +D+ +M L G ++ E+ KR +
Sbjct: 64 VRVLGYDMTREPEKLK-ARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSI 122
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDP-KARIEATS 179
E+L L E R S G +QR+++A A++++PEL LDEP S LD ARI
Sbjct: 123 ELLKLFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARI--IK 180
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR 227
+ + ++ G T+ +TTH++N E+ +++ +I + KLVA +PE + R
Sbjct: 181 DIIRDEKKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKR 229
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 122 bits (304), Expect = 3e-27
Identities = 78/229 (34%), Positives = 127/229 (55%), Gaps = 20/229 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ +L Y VKAV+G++F +++G LGPNGAGKTT + +L GL G+I
Sbjct: 14 ILKVVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKDSGEIYY 73
Query: 64 FGKSPS----EVREKVAYVPQTFSLNFRVPLSVLDVVSM-GGLYKKGLIHFNIPQEVIKR 118
FG+ E + K+ Q + F L+V + + + GLY GL +K
Sbjct: 74 FGERKDVLDRETKRKIGVCLQKSA--FFENLTVWETLKLFRGLYGTGLD--------LK- 122
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E++ L+ I KK + LSGGQ QR+ +A A +++PE++ LDEP + LDP+AR +
Sbjct: 123 --EVMGLFSLENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIW 180
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
T+ K ++G T+ +TTH + + D V +ID K++A G+P ++
Sbjct: 181 DTIEHFK-NLGKTIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSLI 228
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 122 bits (302), Expect = 6e-27
Identities = 76/210 (36%), Positives = 127/210 (60%), Gaps = 11/210 (5%)
Query: 20 VEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEV---REKVA 76
++ + +++GE LLGP+G GKTTLLR+LAG G +++ G+ + + R V
Sbjct: 21 LKDIDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQADSGAVVIGGRDMTGIPAHRRPVN 80
Query: 77 YVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSF 136
V Q+++L LSV D V+ G L +KG+ + Q V +R +E + + + +
Sbjct: 81 TVFQSYALFPH--LSVADNVAFG-LKQKGVRGAELRQRV-ERAMETVQ---IGQFGNRKP 133
Query: 137 RELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITT 196
+LSGGQ+QRV +ARA+++ PE+LLLDEPLSALD K R + LS ++ED+GIT + T
Sbjct: 134 DQLSGGQRQRVALARAIVNQPEVLLLDEPLSALDLKLRKQLQVELSNLQEDLGITFVFVT 193
Query: 197 HDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
HD + + D++ ++++ ++ G E++
Sbjct: 194 HDQEEALVMSDRIAVMNQGRIEQLGRAEDL 223
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 122 bits (302), Expect = 6e-27
Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 29/234 (12%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI--- 61
I NL + VKAV+G++F++K GE + LLGP+G GKTT L +LAG++ G+I
Sbjct: 4 IRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFD 63
Query: 62 -LVFGKSPSEVREKVAYVPQTFSL--------NFRVPLSVLDVVSMGGLYKKGLIHFNIP 112
++ P + RE V V Q ++L N PL +
Sbjct: 64 DVLVNDIPPKYRE-VGMVFQNYALYPHMTVFENIAFPLRARRISK--------------- 107
Query: 113 QEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPK 172
EV KR +EI L + + + +LSGGQ+QRV +ARAL+ P++LL DEPLS LD
Sbjct: 108 DEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDAN 167
Query: 173 ARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
R+ + + +++++GIT + THD + + ++ + ++ KLV +G+P+EV
Sbjct: 168 LRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEV 221
>sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|72468|pir||GRYCS7
sulfate transport protein - Synechococcus sp. (strain
PCC 7942) >gi|142152|gb|AAA22056.1| (J04512) sulfate
permease (gtg start codon) [Synechococcus PCC6301]
Length = 344
Score = 121 bits (301), Expect = 7e-27
Identities = 75/225 (33%), Positives = 135/225 (59%), Gaps = 11/225 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I+ ++ + S +AV+ + ++ G + LLGP+G+GK+TLLR++AGL G+I +
Sbjct: 9 IQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIFLT 68
Query: 65 GKSPSE--VREK-VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
G+ + VR++ + +V Q ++L F+ L+V ++ G +K + ++V R E
Sbjct: 69 GRDATNESVRDRQIGFVFQHYAL-FK-HLTVRKNIAFGLELRK-----HTKEKVRARVEE 121
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+L+ + L + + +LSGGQ+QRV +ARAL P++LLLDEP ALD K R + S L
Sbjct: 122 LLELVQLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWL 181
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K+ +++ +T + THD +E+ D++++++ K+ GSP E+
Sbjct: 182 RKLHDEVHVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEI 226
>gi|11466425 probable transport protein [Mesostigma viride]
>gi|7259568|gb|AAF43869.1|AF166114_81 (AF166114)
probable transport protein [Mesostigma viride]
Length = 348
Score = 121 bits (301), Expect = 7e-27
Identities = 71/222 (31%), Positives = 132/222 (58%), Gaps = 11/222 (4%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
+N++ + + +A+ + ++K G + LLGP+G+GK+TLLR++AGL T +G I + GK+
Sbjct: 6 DNISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGKN 65
Query: 68 PSEVR---EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILD 124
S + +V Q ++L F+ ++V D ++ G ++ I FN ++ ++ ++L+
Sbjct: 66 ASGYSIQSRNIGFVFQNYAL-FK-NMTVYDNIAFGLELRR--ISFN---DISRKVNKLLE 118
Query: 125 FLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKI 184
+ L+ + + +LSGGQ+QR+ +ARAL P++LLLDEP ALD + R + L +
Sbjct: 119 LVQLQNLGHRYPAQLSGGQRQRIALARALAIEPKVLLLDEPFGALDARVRKNLRAWLRDL 178
Query: 185 KEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
IT II THD +EI D++++ + ++ G P+++
Sbjct: 179 HNKFSITTIIVTHDQQEAMEIADEIVVFNSGRIEQIGKPQDI 220
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 121 bits (300), Expect = 1e-26
Identities = 76/230 (33%), Positives = 132/230 (57%), Gaps = 11/230 (4%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
++ + NL + + ++GL+F ++ GE ++GPNGAGKTT LR+LAG+ N+ G
Sbjct: 7 QFAVSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKNFNGDA 66
Query: 62 LVFGKSPSEVREK--VAYVPQ-TFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
VFG P E ++ ++Y+P+ F LD + LY KG + ++ +K
Sbjct: 67 KVFGLRPIEAKQNGYISYMPEDAFPYEKLTGYENLDFYA--ELYAKG--DKELKEKYLKL 122
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
G+EI + L E E S G K+R+IIAR LM P+L +LDEP SALD ++ +
Sbjct: 123 GIEIAN---LGERIYDKTAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALDVESAVRIR 179
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLR 227
+ + ++ +T+I+++H++ + + D++ LI D ++VA G P+E+++
Sbjct: 180 NIILEMARRYNMTIILSSHNMLEVEYLCDRITLINDGRIVANGKPKEIIK 229
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 121 bits (300), Expect = 1e-26
Identities = 71/221 (32%), Positives = 131/221 (59%), Gaps = 11/221 (4%)
Query: 9 NLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSP 68
N++ + A++ + ++ G+ + LLGP+G+GK+TLLR +AGL QG+I++ G+
Sbjct: 7 NVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQDA 66
Query: 69 SEV---REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDF 125
+ V + + +V Q ++L F+ L++ ++ G +K + P + +R E+L
Sbjct: 67 THVDIRKRNIGFVFQHYAL-FK-HLTIRQNIAFGLEIRK-----HPPAKTKERVEELLSL 119
Query: 126 LGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIK 185
+ L+ + + +LSGGQ+QRV +ARAL P++LLLDEP ALD K R E + L K+
Sbjct: 120 IQLEGLGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLH 179
Query: 186 EDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+++ +T + THD +E+ D+++++ K+ G+ EE+
Sbjct: 180 DEVHLTSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEI 220
>emb|CAB93444.1| (AL357591) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 563
Score = 121 bits (300), Expect = 1e-26
Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 29/251 (11%)
Query: 4 VIEAENLTIMYDSVK--AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY---- 57
+I E++++ YD V + F++ +GE +LL GP+G GK+T+L + GL ++
Sbjct: 1 MIRFEDVSVTYDGATEPTVRAVDFEVPEGELVLLAGPSGVGKSTVLGAVGGLVPHFTGGT 60
Query: 58 -QGKILVFGKS-----PSEVREKVAYVPQTFSLNFRVPLS--VLDVVSMGGLYKKGLIHF 109
+G++ V G+ P E+ + V V Q PLS V D V Y G+
Sbjct: 61 LRGRVTVAGRDTRTHKPRELADVVGTVGQD-------PLSHFVTDTVEDELAY--GMESL 111
Query: 110 NIPQEVIKRGLE-ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSA 168
+P +V++R +E LD LGL ++ + LSGGQ+QRV I L +P++L+LDEP SA
Sbjct: 112 GLPPDVMRRRVEETLDLLGLSDLRSRPIATLSGGQQQRVAIGSVLTPHPDVLVLDEPTSA 171
Query: 169 LDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR--KLVAFGSPEEVL 226
LDP A E + L ++ D+G T+++ H + +I+ D+V+L+ + G+P EV+
Sbjct: 172 LDPAAAEEVLAVLQRLVHDLGTTVLMAEHRLERVIQYADQVVLLPAPGEAPLIGAPAEVM 231
Query: 227 RDEIIGKVYGP 237
+ VY P
Sbjct: 232 ---AVSPVYPP 239
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 120 bits (299), Expect = 1e-26
Identities = 77/232 (33%), Positives = 134/232 (57%), Gaps = 14/232 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ E+++ Y K + ++F +KK E ++LGP+GAGKT LL ++AG+ +G+I++
Sbjct: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
Query: 64 FGKS----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
G P E R +AY+PQ ++L ++V D ++ G ++ QE+ ++
Sbjct: 60 NGVDVTSYPPEKRN-LAYIPQDYALFPH--MTVYDNIAFGLKLRR-----ISRQEIDRKV 111
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
EI LG++ + + R LSGG+KQRV IARAL+ PELLLLDEP + LD + + +
Sbjct: 112 KEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMT 171
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLRDEI 230
+ ++++G T + TH I +GD+V +++ +LV G +EV + +
Sbjct: 172 EMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPV 223
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 120 bits (299), Expect = 1e-26
Identities = 75/228 (32%), Positives = 136/228 (58%), Gaps = 16/228 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ E+++ Y K E ++F +++GE ++LGP+G+GKT LL ++AG+ + +G+IL+
Sbjct: 1 MLKVESISKDYREFKLRE-ISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRILL 59
Query: 64 FGKS----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-EVIKR 118
G+ P E R +Y+PQ ++L ++V D ++ G +K IP+ EV ++
Sbjct: 60 RGEDITGLPPEKRN-FSYIPQNYALFPH--MTVFDNIAFGLKLRK------IPRKEVARK 110
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+ + LG+ + + R LSGG++QRV IARAL+ PELLL+DEP + LD + + +
Sbjct: 111 VREVAESLGIDHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLI 170
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEV 225
+ + +++ G T I TH + +GD+V +++ +LV G +V
Sbjct: 171 REMKRWRKEFGFTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDV 218
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 120 bits (298), Expect = 2e-26
Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 6/210 (2%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
++ +N Y E + F KKGE + LLGP+G GK+TLLR +AGL GKI +
Sbjct: 4 LKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQINGGKISLN 63
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
K +++ + + F P L+V + V+ G KK +++ KR ++L
Sbjct: 64 DKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKIKK-----MDKKDIEKRVKKML 118
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ L+E AK +LSGGQ QRV +AR+L+ P+LLLLDEPLSALD K R + +
Sbjct: 119 KLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRVQIKE 178
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLID 213
I++++ +T I THD +E+ D ++L++
Sbjct: 179 IQKELELTTIFVTHDQEEALELSDTIILMN 208
>sp|Q55281|MNTA_SYNY3 MANGANESE TRANSPORT SYSTEM ATP-BINDING PROTEIN MNTA
>gi|1084178|pir||S55046 ABC-type transport system
ATP-binding protein mntA [validated] - Synechocystis sp.
(PCC 6803) >gi|755076|gb|AAA68931.1| (L34630) mntA gene
product [Synechocystis sp.] >gi|1653001|dbj|BAA17918.1|
(D90910) Mn transporter MntA [Synechocystis sp.]
Length = 260
Score = 120 bits (297), Expect = 2e-26
Identities = 74/236 (31%), Positives = 132/236 (55%), Gaps = 7/236 (2%)
Query: 5 IEAENLTIMYDSVK-AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
I + +++ Y++ + A+ T ++ G L+GPNG+GK+TL + + G QG++ +
Sbjct: 10 ISVDGVSVTYNNARLALYNATCTVEPGTITALVGPNGSGKSTLFKSIMGFLQPSQGRVRI 69
Query: 64 FGKSPSEVREK--VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR-GL 120
G S + +++ +AYVPQ +++ P+SV DVV MG ++ IP +R +
Sbjct: 70 GGFSVQKAQKQQLMAYVPQADEVDWNFPVSVFDVVMMGRYGYMNVLR--IPSAKDRRLVM 127
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E L+ +G+ + + ELSGGQK+R +ARAL +++LLDEP + +D K
Sbjct: 128 ESLERVGMVKYRDRQIGELSGGQKKRAFLARALAQEGKVILLDEPFTGVDVKTEKGMIDL 187
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
L +++ D G T++I+THD+ + D +L++R ++A G EE E + +G
Sbjct: 188 LMELR-DEGHTILISTHDLASISTFCDHTILLNRTILAQGKTEETFTKENLELTFG 242
>pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AAC06695.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 120 bits (297), Expect = 2e-26
Identities = 79/241 (32%), Positives = 138/241 (56%), Gaps = 19/241 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E + + K ++G + + KGE + LLGPNGAGKTTL + G + +GK+L+
Sbjct: 1 MLEVREVEKSFKKKKVLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGFISVDKGKVLL 60
Query: 64 FGKSPSEV------REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHF--NIPQEV 115
G+ + + ++ +A++PQ +L L+VL+ + + + F + +E
Sbjct: 61 DGEDVTHLPPFKRAQKGLAFLPQEHTLF--EDLTVLENLLI-------FLEFFTDSKEEA 111
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
I + +L+ GL E+ + LSGGQK+R+ IAR+L++ P+ +LLDEP + LDP
Sbjct: 112 ITKAEALLEDFGLLELKDQKAYALSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIVS 171
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKV 234
E + +K + GI ++IT H+V I++ D+V +I + K++A G PEEV+ +E + K
Sbjct: 172 EIREIVKNLKNN-GIGVLITDHNVRETIKMVDRVYIISEGKVLAHGKPEEVVNNEAVRKT 230
Query: 235 Y 235
Y
Sbjct: 231 Y 231
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 120 bits (297), Expect = 2e-26
Identities = 78/245 (31%), Positives = 136/245 (54%), Gaps = 16/245 (6%)
Query: 23 LTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEV---REKVAYVP 79
++ +K GE L LLGP+G GKTT LR++AGL +G++ G+ +++ + V
Sbjct: 20 VSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRVYFDGRDITDLPPYERNIGLVF 79
Query: 80 QTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLEILDFLGLKEIAKKSFRE 138
Q ++L ++V V+ G ++ +P+ E+ KR E+LD +GL+ + E
Sbjct: 80 QDYALFPH--MTVFKNVAFGLEVRR------VPRMEIEKRVREVLDLVGLRGFENRLPEE 131
Query: 139 LSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITTHD 198
LSGGQ+QRV +ARAL+ P++LLLDEPLS LD K R + + +I +++GIT I THD
Sbjct: 132 LSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGEIKRIVKELGITTIYVTHD 191
Query: 199 VNPLIEIGDKVMLID-RKLVAFGSPEEVL---RDEIIGKVYGPASKAVRVGERLYCIIGD 254
+ + D++ +++ ++ G P ++ ++E + G ++ + +GD
Sbjct: 192 QEEAMVLSDRIAVMNFGRIEQVGEPYDLYYNPKNEFVANFLGISNIVELEAKEGRACLGD 251
Query: 255 VHFRV 259
+ F V
Sbjct: 252 LCFEV 256
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 120 bits (297), Expect = 2e-26
Identities = 74/225 (32%), Positives = 129/225 (56%), Gaps = 7/225 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I +N++ + S +A+ + ++ GE + LLGP+G+GKT+LLR++AGL QG I
Sbjct: 3 IVIQNVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFH 62
Query: 65 GKSPSEVR---EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
++ +V +V Q ++L ++V D +S G L K +E+ ++ E
Sbjct: 63 KDKVTQTHAASRQVGFVFQHYALFPH--MTVADNISYG-LRVKPRKERPSKKEIAEKVRE 119
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+L + L+ + + +LSGGQ+QR+ +ARAL P++LLLDEP ALD K R + L
Sbjct: 120 LLALVKLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRKWL 179
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
K+ + +T + THD +++ D+V+++++ K+ GSP+EV
Sbjct: 180 RKLHNEFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEV 224
>gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1]
Length = 298
Score = 120 bits (297), Expect = 2e-26
Identities = 72/228 (31%), Positives = 123/228 (53%), Gaps = 15/228 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M+ V+ A+++ Y A+ G++ + +GE L+GPNGAGKTTL+R L G T G+
Sbjct: 1 MDSVLVADDVAKSYGDAAALRGVSLSVSEGEVFALVGPNGAGKTTLVRCLTGTTTPDGGR 60
Query: 61 ILVFGKSPSEV-REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
+ + G+ P + ++++ +PQ+FS P L + G Y P V
Sbjct: 61 VELLGEPPQDAQKQRLGLLPQSFS-----PPDRLTAAELVGYYAGLYADSRAPDAV---- 111
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
L+ +GL + +LSGGQ++R +A AL+++P++L LDEP + +DP R S
Sbjct: 112 ---LESVGLDPDDATRYGDLSGGQRRRACVAAALVNDPDVLFLDEPTTGVDPAGRHALWS 168
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVL 226
+ D G T+++TTHD+ + D+V +L D + A G+P +++
Sbjct: 169 VFEGLAAD-GTTIVLTTHDMAEASALADRVGLLADGDIAATGTPADLV 215
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 119 bits (296), Expect = 3e-26
Identities = 74/229 (32%), Positives = 126/229 (54%), Gaps = 13/229 (5%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E ++ AE L Y +AV+G++F++ +GE LLGPNGAGKTT +++L+ L G+
Sbjct: 7 EAMVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEA 66
Query: 62 LVFGKS----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
+ G S P VR + VPQ + + ++ +Y + ++ E +
Sbjct: 67 WIAGYSIVREPGNVRRVIGLVPQDLTADD-------EMSGWDNVYIQARLYGLPSSEARE 119
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
R E+LD+L L E A + SGG ++++ IA +L+ +P++L LDEP LD +R
Sbjct: 120 RTREVLDYLDLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSL 179
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ +K +T+++TTH + + D+V +IDR ++VA G+PEE+
Sbjct: 180 WRYIEDLKRS-AVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEEL 227
>pir||C75369 amino acid ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459415|gb|AAF11206.1|AE002008_1 (AE002008) amino
acid ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 265
Score = 119 bits (296), Expect = 3e-26
Identities = 74/229 (32%), Positives = 132/229 (57%), Gaps = 14/229 (6%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E +I A+N+ + + A+ G+ +++GE ++++GP+G+GK+T +R + L + G I
Sbjct: 23 EPIIVAQNVQKHFGTFHALRGVNLTVRQGEVVVIIGPSGSGKSTFIRTINALDPHDGGSI 82
Query: 62 LVFG------KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
V G ++ +R +V V Q+F N L+VLD +++ +G+ +
Sbjct: 83 TVDGLPLQGARNLDAIRREVGMVFQSF--NLFPHLTVLDNITLAPTRVRGVDK----AQA 136
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
RGL++L +G++E A K +LSGGQ+QRV IARAL P+++L DEP SALDP+
Sbjct: 137 QARGLDLLRRVGIEEQAYKFPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMIK 196
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPE 223
E + ++ G+TM++ TH++ E+ D+++ D+ +V +PE
Sbjct: 197 EVLDVMKELAR-TGMTMLVVTHEMGFAREVADRILFFDQGNIVEDTTPE 244
>pir||F81348 ABC transport system ATP-binding protein Cj0774c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968220|emb|CAB73039.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 336
Score = 119 bits (296), Expect = 3e-26
Identities = 74/241 (30%), Positives = 129/241 (52%), Gaps = 19/241 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I+ +NL Y + ++ ++KKGE ++G +GAGK+TLLR + GL +G + V
Sbjct: 1 MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKV 60
Query: 64 FGKSPSEVREK-----------VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNI- 111
F + ++ +K + + Q F+L R + + + Y + H +
Sbjct: 61 FDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFHAKLF 120
Query: 112 ------PQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEP 165
+E+ ++ +L+ +GL K RELSGGQKQRV IARAL NP++LL DE
Sbjct: 121 NKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILLSDEA 180
Query: 166 LSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEE 224
SALDP +SKI + GIT+++ TH+++ + +I K +L++ +++ G+ +E
Sbjct: 181 TSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQIIGSGAIDE 240
Query: 225 V 225
+
Sbjct: 241 L 241
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 119 bits (296), Expect = 3e-26
Identities = 73/226 (32%), Positives = 126/226 (55%), Gaps = 7/226 (3%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E +++ + +T +D AV+ ++ + KGE LLG +G+GK+TLLR+LAG +G+I
Sbjct: 20 EVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRI 79
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
+ G+ +++ + F P +SV ++ G L + GL I + V
Sbjct: 80 FLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFG-LKQDGLPKAEIDERVA---- 134
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E+L + + + AK+ +LSGGQ+QRV +AR+L P+LLLLDEP+ ALD K R +
Sbjct: 135 EMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLE 194
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEV 225
L +I E +G+T ++ THD + + ++ ++ + GSP ++
Sbjct: 195 LVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDI 240
>gi|11467416 putative protein of 244 amino acids [Cyanophora paradoxa]
>gi|1351806|sp|P48334|YCXD_CYAPA PROBABLE ABC
TRANSPORTER ATP-BINDING PROTEIN IN YCF23-APCF INTERGENIC
REGION (ORF244) >gi|7445867|pir||T06961 ABC transport
protein homolog - Cyanophora paradoxa cyanelle
>gi|1016217|gb|AAA81304.1| (U30821) putative protein of
244 amino acids [Cyanophora paradoxa]
Length = 244
Score = 119 bits (295), Expect = 4e-26
Identities = 73/236 (30%), Positives = 128/236 (53%), Gaps = 10/236 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+E NLT+ Y ++ + ++ G+ + ++GPNGAGK+TLL+ + G+I
Sbjct: 9 LEINNLTVSYPHGTVLQNIFLTIESGKLIGIIGPNGAGKSTLLKTIIEQIKPISGEIFYQ 68
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLI--HFNIPQEVIKRGLEI 122
G R ++ YVPQ +++ P++V DVV M L K G + E +K LE
Sbjct: 69 GAPLKNQRARIGYVPQRAQVDWDFPINVWDVVMMARLKKIGWFSSYSKKSYECVKAALEK 128
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+D L K+ ++ RELSGGQ+QRV +AR L +LLLLDEP + +D + + S
Sbjct: 129 VDMLKYKD---RNIRELSGGQQQRVFLARLLAQEADLLLLDEPFTGVDFQTQ---KIIFS 182
Query: 183 KIKEDMGIT--MIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+KE + +I+ HD+ I D+++L+++K+++ ++L + + ++G
Sbjct: 183 LLKEQIASNKIVIVIHHDLGESIINFDELILLNKKIISHDLTTKILNSKKLSTLFG 238
>pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H37RV)
>gi|1655663|emb|CAB03729.1| (Z81368) cysA [Mycobacterium
tuberculosis]
Length = 351
Score = 119 bits (295), Expect = 4e-26
Identities = 77/230 (33%), Positives = 129/230 (55%), Gaps = 13/230 (5%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M Y I + T Y A++ + F + G LLGP+G+GK+TLLR +AGL G
Sbjct: 1 MTYAIVVADATKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGT 60
Query: 61 ILVFGKSPSEV---REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
I + G+ + V R + +V Q ++ F+ L+V D V+ G +K P+ IK
Sbjct: 61 ITINGRDVTRVPPQRRGIGFVFQHYAA-FK-HLTVRDNVAFGLKIRKR------PKAEIK 112
Query: 118 RGLE-ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
++ +L +GL + +LSGGQ+QR+ +ARAL +PE+LLLDEP ALD K R E
Sbjct: 113 AKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREE 172
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
+ L ++ +++ +T ++ THD +++ D++ ++ + ++ GSP +V
Sbjct: 173 LRAWLRRLHDEVHVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDV 222
>pir||E82065 ABC transporter, ATP-binding protein VC2528 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|2317737|gb|AAC46369.1| (AF013987) putative ABC
transporter ATP-binding protein [Vibrio cholerae]
>gi|9657111|gb|AAF95669.1| (AE004322) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 241
Score = 119 bits (295), Expect = 4e-26
Identities = 76/239 (31%), Positives = 138/239 (56%), Gaps = 14/239 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++A++L Y K V ++ +++ G+ + LLGPNGAGKTT ++ GL +G I +
Sbjct: 3 ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITI 62
Query: 64 FGKS------PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
S R + Y+PQ S+ FR LSV D + ++ L H +E
Sbjct: 63 DDNDISILPMHSRSRMGIGYLPQEASI-FR-KLSVEDNIMAVLQTREELTH----EERQD 116
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+ ++L+ ++ I K + LSGG+++RV IARAL +NP+ +LLDEP + +DP + I+
Sbjct: 117 KLEDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDI 176
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVY 235
+ ++ D G+ ++IT H+V +++ +K ++ + +L+A G+P++VL +E + +VY
Sbjct: 177 KKIIEHLR-DRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVY 234
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 119 bits (295), Expect = 4e-26
Identities = 80/230 (34%), Positives = 132/230 (56%), Gaps = 19/230 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VIE ENLT Y KAV+ L+ +++KG LGPNGAGKTT + + G+ G + +
Sbjct: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
Query: 64 FG----KSPSEVREKVAYVPQTFSLNFRVPL-SVLDVVSMGGLYKKGLIHFNIP-QEVIK 117
G K P + +E++ ++P+ ++ + LD + +NIP QE K
Sbjct: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFAS---------FYNIPKQEKEK 113
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPK-ARIE 176
R E+L +GL ++ + + S G KQR+++A+AL+++PELL+LDEP S LDP+ AR+
Sbjct: 114 RIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLV 173
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEV 225
L + K+ G T+ ++H ++ + E+ DKV +++ KL G+ EE+
Sbjct: 174 KDIILEQKKQ--GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
>gi|11497707 nitrate ABC transporter, ATP-binding protein (nrtC-1)
[Archaeoglobus fulgidus] >gi|7445759|pir||G69260 nitrate
ABC transporter, ATP-binding protein (nrtC-1) homolog -
Archaeoglobus fulgidus >gi|2650561|gb|AAB91142.1|
(AE001100) nitrate ABC transporter, ATP-binding protein
(nrtC-1) [Archaeoglobus fulgidus]
Length = 243
Score = 118 bits (294), Expect = 5e-26
Identities = 70/213 (32%), Positives = 127/213 (58%), Gaps = 9/213 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I + ++ + +KA++G++F+++ GET ++GP+G GK+TLL ++AGL +G++LV
Sbjct: 1 MITVKGISKFFGELKALDGVSFEVEDGETCAIIGPSGCGKSTLLLIMAGLLKPSEGEVLV 60
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPL-SVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
++ + + A + Q F L P +V D V++G L +G + +R +
Sbjct: 61 DDRAVNSPLKNAALILQDFGL---FPWKTVYDNVALG-LKIRGFSR----RAERERVTAL 112
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
L+ GLK K ++LSGG KQRV IARA+ P++LL+DEPLS+LD +R E + L
Sbjct: 113 LEKFGLKGFEKSYPKQLSGGMKQRVAIARAIAIEPQILLMDEPLSSLDALSREEMQNFLL 172
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRK 215
+ ++ TM++ TH + + +G K++++ +
Sbjct: 173 NLWKETKTTMVLVTHSIEEAVFLGRKIVVLTER 205
>pir||G72406 hypothetical protein TM0191 - Thermotoga maritima (strain MSB8)
>gi|4980687|gb|AAD35283.1|AE001704_4 (AE001704)
iron(III) ABC transporter, ATP-binding protein, putative
[Thermotoga maritima]
Length = 258
Score = 118 bits (294), Expect = 5e-26
Identities = 76/239 (31%), Positives = 134/239 (55%), Gaps = 16/239 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ NL+ Y + K ++ +TF +KGE + +LGPNGAGK+TLL+ +AG+ QG + +
Sbjct: 1 MLRIRNLSFSYRNKKILDNVTFSAQKGELIAILGPNGAGKSTLLKCIAGI-LKCQG-VEI 58
Query: 64 FGKSPSEVREK-----VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
F K + + V YVPQ R+ +L+V ++ L +K + + +E I+
Sbjct: 59 FSKPLEQYTRRDLARIVGYVPQ------RIDPGMLNVYNLILLGRKPYVSVSPSKEDIEI 112
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
+++ L L+ + + + LSGG+ Q+V IARAL+ PE+LLLDEP + LDPK +IE
Sbjct: 113 VNRVVERLNLQHLVFQRAKNLSGGELQKVSIARALVQEPEILLLDEPTNNLDPKNQIEIM 172
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDK-VMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+ + + +++ H++N + D+ + + D K+V G +L ++ +VYG
Sbjct: 173 EIVQDFVKSRKMALVV-MHEINLALRFADRFIFMKDGKIVRDGE-RSILTPDLFWEVYG 229
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 118 bits (293), Expect = 6e-26
Identities = 74/226 (32%), Positives = 126/226 (55%), Gaps = 23/226 (10%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E NL++ + AV+GLT +++GE L LLGPNG+GKTT +R + G+ Y+G+I
Sbjct: 3 ILEISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGM-VPYEGEIRN 61
Query: 64 FGKSPSEVREKVAYVPQT--FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
+ S V ++PQ LN V ++ S+ G+ E +R E
Sbjct: 62 YATS-------VGWMPQNSPLYLNLSVEENLRFFASLYGI------------EDERRVEE 102
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+L + L+ K+ + LSGG +QR ++A A++ +PELL+LDEP + +DP R+
Sbjct: 103 MLKLVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQF 162
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLR 227
K++E+ G T+++TTH ++ V++ + +A G+PEE+ R
Sbjct: 163 EKLREE-GKTILVTTHYMDEAERCERLVLIRNGSKIAEGTPEEIKR 207
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 118 bits (293), Expect = 6e-26
Identities = 78/242 (32%), Positives = 134/242 (55%), Gaps = 16/242 (6%)
Query: 26 KLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEV---REKVAYVPQTF 82
++K GE + +LGP+G GKTT LR++AGL +G +L G+ + + + +V Q +
Sbjct: 23 EVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDY 82
Query: 83 SLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL-EILDFLGLKEIAKKSFRELSG 141
+L ++V V+ G +K +P++ I+R + E+L+ +GLK + +LSG
Sbjct: 83 ALFPH--MNVFKNVAFGLEVRK------LPRKEIERKVREVLELVGLKGFENRMPEQLSG 134
Query: 142 GQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNP 201
GQ+QRV +ARAL+ PE+LLLDEPLS LD K R + +I++++GIT + THD
Sbjct: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
Query: 202 LIEIGDKVMLID-RKLVAFGSPEEVL---RDEIIGKVYGPASKAVRVGERLYCIIGDVHF 257
+ I D++ +++ ++ G P E+ + E + K G + +G++ F
Sbjct: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCF 254
Query: 258 RV 259
V
Sbjct: 255 NV 256
>gb|AAG20909.1| (AE005157) ABC transporter, ATP-binding protein; ZurA
[Halobacterium sp. NRC-1]
Length = 258
Score = 118 bits (293), Expect = 6e-26
Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 5/234 (2%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
IE ++ Y + VE ++ + GE + ++GPNG+GK+TL++++ GL +G+ +F
Sbjct: 19 IELADVAFGYTATPVVEDISLAVSPGEYIGVVGPNGSGKSTLMKLMLGLLRPDRGRARLF 78
Query: 65 GKSPSE--VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
G + ++ YV Q S + +P++V +VV MG G + + E
Sbjct: 79 GVPAHQFDTGSRIGYVAQHASASKEMPITVREVVKMGRFPHVGFGQLSADDWAVVD--EA 136
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
LD +G+ A + ELSGGQ+QR IARAL ELL+ DEP +D ++ + A L
Sbjct: 137 LDTVGMSAFADRRVTELSGGQRQRAFIARALAGEAELLVFDEPTVGVDIES-VAAFYDLL 195
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+ D GIT+++ HD+ + E ++V+ ++R+L G E + + + + +G
Sbjct: 196 DVLHDDGITVVLIEHDLGAVTEHAERVICLNRELHFDGPTAEFVDSDALARAFG 249
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 118 bits (292), Expect = 9e-26
Identities = 85/268 (31%), Positives = 136/268 (50%), Gaps = 45/268 (16%)
Query: 17 VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI-----LVFGKS---- 67
V A++ + ++ GE +LGP+GAGKTT +R++AGL G++ LV
Sbjct: 18 VVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIV 77
Query: 68 PSEVREKVAYVPQTFSL--------NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
P E R K+ V QT++L N PL+ + + +E+ KR
Sbjct: 78 PPEDR-KIGMVFQTWALYPNLTAFENIAFPLTNMKMSK---------------EEIRKRV 121
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E+ L + + RELSGGQ+QRV +ARAL+ +P LLLLDEP S LD + R A +
Sbjct: 122 EEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARA 181
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLRD-------EII 231
+ +++ +G+T+++ +HD + I D+V +L+ KLV G PE++ + +I
Sbjct: 182 LVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLI 241
Query: 232 GKVYGPASKAVRVGERLYCIIGDVHFRV 259
G++ K G +IG + F V
Sbjct: 242 GEINELEGKVTNEG----VVIGSLRFPV 265
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 118 bits (292), Expect = 9e-26
Identities = 74/227 (32%), Positives = 126/227 (54%), Gaps = 7/227 (3%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
+EY+++ +NL+ + +AV + +++KGE LGPNGAGKTT +R+L GL G
Sbjct: 9 LEYIVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGT 68
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
I +F K V++++ + SL P + + L I +P+ I
Sbjct: 69 IKIFQKDI--VKDRIQILANVGSL-VENPSYYPHLTAYENLEALRKI-LGVPKTRID--- 121
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E+L + LKE A K + S G KQR+ IA AL+ NPELL+LDEP + LDP IE +
Sbjct: 122 EVLQTVRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNL 181
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLR 227
+ ++ ++ G+T+II++H ++ + ++ +V ++ + + F E +R
Sbjct: 182 IKRLPKEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMR 228
>gb|AAF81672.1|AF232688_1 (AF232688) SloA [Streptococcus mutans]
Length = 240
Score = 118 bits (292), Expect = 9e-26
Identities = 68/232 (29%), Positives = 131/232 (56%), Gaps = 3/232 (1%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ ENL++ Y A+E ++ ++ ++GPNGAGK+TL + + + +++G +
Sbjct: 1 MLKIENLSVSYRDHLALENVSLEIPSSTITGIIGPNGAGKSTLFKGVLNM-VDHEGTSFI 59
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
GK S+ ++YV Q +++ P+ V + VS+G L+ K N+ ++ + E L
Sbjct: 60 DGKILSQNLRSISYVEQKADIDYNFPIKVKECVSLG-LFSKVKPFSNLKKQDWQCVQEAL 118
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ L + A + +LSGGQ QR+++AR L+ + + + LDEP +D + L K
Sbjct: 119 SQVDLADYANRQISQLSGGQFQRMLLARCLVQDADYIFLDEPFVGIDIISEELIVGLLQK 178
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVY 235
+K++ G T++I HD++ + D V+L+++K++AFG E V + + K Y
Sbjct: 179 LKKE-GKTILIIHHDLSKVKTYFDHVLLLNKKVLAFGQTETVFTQKNLTKTY 229
>pir||E81936 probable amino acid permease ATP-binding protein NMA0900 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379613|emb|CAB84178.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 242
Score = 117 bits (291), Expect = 1e-25
Identities = 70/218 (32%), Positives = 126/218 (57%), Gaps = 14/218 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I+ +N+ + + + G+ ++KKGE +++ GP+G+GK+TL+R + L + G+I V
Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV 60
Query: 64 FGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G + ++ +RE+V +V Q+F N L+VL+ +++ + KG ++
Sbjct: 61 DGVNVADPKTDLNKIREEVGFVFQSF--NLYPHLTVLENITLAPMKVKG----QNAEQAE 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+ +E+L+ +GL +LSGGQ+QRV IAR L P ++L DEP SALDP+ E
Sbjct: 115 KKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR 214
+ + E G+TM+ TH++ E+ D+V+ +D+
Sbjct: 175 VLKVMKDLAES-GMTMMCVTHEMGFAREVADRVIFVDK 211
>emb|CAB92552.1| (AJ275980) FecE protein [Serratia sp. ATCC39006]
Length = 253
Score = 117 bits (291), Expect = 1e-25
Identities = 78/244 (31%), Positives = 135/244 (54%), Gaps = 17/244 (6%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I AEN+T V ++ + +GET+ L+GPNG GK++LLR+LAGL + G + +
Sbjct: 3 ITAENITWTVGKKTIVNNVSLSVSRGETVGLIGPNGCGKSSLLRILAGLRRPHSGTVTLD 62
Query: 65 GKSPSEVREK-----VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ--EVIK 117
G++ + + +K VA+V Q + V+DVV +G + PQ + +
Sbjct: 63 GQNIARIAKKQLARRVAFVEQHGMT--EANMRVVDVVKLGRIPHHSPFSNWSPQDDDTVT 120
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
L+ +D L E + + LSGG++QRV IARA+ +P +LLDEP + LD +I+
Sbjct: 121 AALQRVDMLSKSE---QGWLSLSGGERQRVHIARAIAQSPTEILLDEPTNHLDIHHQIQ- 176
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVYG 236
L K+ ++ +T I+ HD+N D ++++ + ++VA GSP+ +L + ++ V+G
Sbjct: 177 ---LMKLVSELPVTSIVAIHDLNHASMFCDALIVMQQGQIVAAGSPQVILTESLLWDVFG 233
Query: 237 PASK 240
+K
Sbjct: 234 VETK 237
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 117 bits (291), Expect = 1e-25
Identities = 77/228 (33%), Positives = 126/228 (54%), Gaps = 15/228 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E N+T + AV+ ++ + GE LLGP+G GKTTLLR+LAG G+I +
Sbjct: 5 LLEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRL 64
Query: 64 FGKSPSEV---REKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
G+ + V + V V Q+++L + V ++ + M G+ K E+ R
Sbjct: 65 NGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKS---------EIDAR 115
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
+ L + L + + +LSGGQ+QRV IARAL++ P LLLLDEPLSALD K R E
Sbjct: 116 VEQALKDVRLADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQ 175
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
L +++D+GIT + THD + + ++ ++++ ++ +PE +
Sbjct: 176 IELINLQKDVGITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETI 223
>gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein GLNQ [Salmonella
typhimurium]
Length = 240
Score = 117 bits (290), Expect = 1e-25
Identities = 74/233 (31%), Positives = 132/233 (55%), Gaps = 15/233 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE +N++ + + + + +++GE ++++GP+G+GK+TLLR + L G ++V
Sbjct: 1 MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query: 64 FGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G ++ +R++ V Q F L L+ L+ V G L +G+ +E
Sbjct: 61 DGLKVNDPKVDERLIRQEAGMVFQQFYLFPH--LTALENVMFGPLRVRGVKK----EEAE 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+ +L +GL E A ELSGGQ+QRV IARAL P+++L DEP SALDP+ R E
Sbjct: 115 KQAKALLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
+ + E+ G+TM+I TH++ ++ +++ ID+ ++ GSP+ ++ +
Sbjct: 175 VLKVMQDLAEE-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGSPQALIEN 226
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 117 bits (290), Expect = 1e-25
Identities = 76/230 (33%), Positives = 124/230 (53%), Gaps = 13/230 (5%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M I EN+ Y+ + + L+ ++K GE LLGP+G GKTTLLR++AG +T G+
Sbjct: 1 MSVSISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGE 60
Query: 61 IL----VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
I V P+ R + V Q +++ ++V + V G +K + +
Sbjct: 61 IKFDKDVINNIPAHKRN-IGMVFQNYAIFPH--MTVRENVEYGLKLRK-----ENKESMK 112
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+ E+L + ++E + LSGGQ+QRV +ARA++ P +LL+DEPLS LD K RIE
Sbjct: 113 KKVDEMLHVVKIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIE 172
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEV 225
S + I+ +GIT + THD + + D++ ++ ++ GSP +
Sbjct: 173 MRSAIKDIQRHVGITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSI 222
>emb|CAB65561.1| (AL136058) probable amino acid ABC transporter protein, ATP-binding
component. [Streptomyces coelicolor A3(2)]
Length = 261
Score = 117 bits (290), Expect = 1e-25
Identities = 80/237 (33%), Positives = 128/237 (53%), Gaps = 21/237 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I E +T + ++ L F + G+ + L+GP+G+GKTT+LR+L L +G I V
Sbjct: 20 LIRLEQVTKRFGDNTVLDHLDFSVDAGKHVTLIGPSGSGKTTILRLLMTLLKPDEGTITV 79
Query: 64 FG--------KSPSEVREKVAYVPQTFSL--NFRVPLSVLDV-VSMGGLYKKGLIHFNIP 112
G K EVR+++ V Q F+L N V ++ + V++ G+ K
Sbjct: 80 DGQKLFPATEKERREVRKQIGMVFQQFNLFPNMSVLRNITEAPVTVLGMPK--------- 130
Query: 113 QEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPK 172
E ++R +LD +GL + +LSGGQ+QRV IARAL P++LLLDE SALDP+
Sbjct: 131 DEAVERAKGLLDMVGLADKCDARPAQLSGGQQQRVAIARALAMRPKVLLLDEVTSALDPE 190
Query: 173 ARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
L I ITM+ TH++N +I D+V++ D +++ G+PE++ +
Sbjct: 191 LVAGVLDLLRDIARSTDITMLCVTHEMNFARDISDQVLMFDSGRVIEAGAPEKIFSE 247
>emb|CAC02745.1| (AL390114) probable sulfate transport ATP-binding protein cysa
[Leishmania major]
Length = 263
Score = 117 bits (290), Expect = 1e-25
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 19 AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPS--EVREK-V 75
A++ +T +GE LLGP+G GKTTLLRV+AGL +G++L+ G+ + VR++ V
Sbjct: 7 ALDDVTLDFAEGELTALLGPSGCGKTTLLRVIAGLERADRGQVLLEGQDATGQPVRQRQV 66
Query: 76 AYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKS 135
+V Q ++L FR ++V + V+ G L K + +R +L+ + +A +
Sbjct: 67 GFVFQHYAL-FR-HMTVFENVAFG-LRVKPRGERPGXAXIRERVRALLELVQXDWLADRY 123
Query: 136 FRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIIT 195
+LSGGQ+QR+ + RAL P +LLLDEP ALD K R E L ++ +++ +T +
Sbjct: 124 PPQLSGGQRQRIALXRALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTSVFV 183
Query: 196 THDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVYGPASKAVRVGERL 248
THD +E+ D+V+L+ R ++ GSP+ V V+G R+ RL
Sbjct: 184 THDQEEALEVADRVVLMQRGRVEQVGSPQAVYEHPATPFVFGFLGHVNRIHGRL 237
>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp. (strain PCC
6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
transporter [Synechocystis sp.]
Length = 368
Score = 116 bits (289), Expect = 2e-25
Identities = 79/221 (35%), Positives = 118/221 (52%), Gaps = 15/221 (6%)
Query: 16 SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK--------S 67
S ++ + F L GE L LLGP+G GKTTLLR++AG T G + + G +
Sbjct: 32 STPVLQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGFETPTSGTVHLEGDCVSGENGLT 91
Query: 68 PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLG 127
P E R+ V Q ++L L++ D ++ G +K ++ Q++ R E+L +G
Sbjct: 92 PPEQRQ-TGMVFQDYALFPH--LTITDNIAFGLRHKSQKLN---RQQIQGRVAEVLHLVG 145
Query: 128 LKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKED 187
L + K+ ELSGGQ+QR+ +ARAL P L+LLDEPLS LD + R + I +
Sbjct: 146 LTGLEKRYPHELSGGQQQRIALARALAPKPNLILLDEPLSNLDVQVRQRLRHEIRHILKA 205
Query: 188 MGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR 227
G I THD + I D++ ++ R L G+PEE+ R
Sbjct: 206 TGTAAIFVTHDQEEAMAISDRIGVMYRGNLEQIGTPEEIYR 246
>gb|AAC68697.1| (AF097414) EfmC [Enterococcus faecium]
Length = 247
Score = 116 bits (289), Expect = 2e-25
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 3/214 (1%)
Query: 35 LLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLD 94
++GPNGAGK+T ++ L L GK+ + G+ + VR+K+AYV Q L+ P+ V+
Sbjct: 35 IIGPNGAGKSTFMKSLLELIPATTGKVTLSGQPVNSVRKKIAYVEQRSELDLSFPVMVIG 94
Query: 95 VVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALM 154
VV +G Y I + +R + L +GL+E AK+ ELSGGQ QRV IARAL
Sbjct: 95 VVLLG-TYPSLRIGQRPGKPGKERARQALKKVGLEEYAKRQISELSGGQLQRVFIARALA 153
Query: 155 SNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR 214
E + LDEP +D + + L ++K + G T++I H ++ + E D+V+L+++
Sbjct: 154 QGAEWIFLDEPFVGIDALSERKIFDILQELK-NSGKTILIVHHFLHKVDEYFDEVILVNK 212
Query: 215 KLVAFGSPEEVLRDEIIGKVYGPASK-AVRVGER 247
+L+A G +E E + YG + V+ GE+
Sbjct: 213 QLIASGPVQESFTSEDLQLPYGEIIRHLVKGGEK 246
>pir||E72314 ribose ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981493|gb|AAD36035.1|AE001758_13
(AE001758) ribose ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 523
Score = 116 bits (289), Expect = 2e-25
Identities = 79/265 (29%), Positives = 147/265 (54%), Gaps = 13/265 (4%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E ++EA N+T + V AV +T ++ KGE L+G NGAGK+TL+++LAG++ +Y+G+I
Sbjct: 10 EVLLEARNITKTFPGVIAVNNVTLQIYKGEVCALVGENGAGKSTLMKILAGVYPDYEGQI 69
Query: 62 LVFGK-----SPSEVREK-VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
+ GK +P E +E +A +PQ L + + +S + + G+I + Q++
Sbjct: 70 FLEGKEVRFRNPREAQENGIALIPQELDLVPNLSSAENIFLSREPVNEFGVIEY---QKM 126
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
++ ++ LG+ K +LS Q+Q V IA+AL + +++++DEP SA+ +
Sbjct: 127 FEQASKLFSKLGVNIDPKTKVEDLSTSQQQMVAIAKALSLDAKIIIMDEPTSAIGKRETE 186
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKV 234
+ + + +K + G ++I +H + + EI D+V+++ D + V G EE D+++ +
Sbjct: 187 QLFNIIRSLKNE-GKSVIYISHRLEEIFEIADRVVVMRDGRKVGEGPIEEFDHDKLVRLM 245
Query: 235 YGPASKAVRVGERLYCIIGDVHFRV 259
G + + ER I D FRV
Sbjct: 246 VGRSIDQFFIKER--ATITDEIFRV 268
Score = 81.9 bits (199), Expect = 7e-15
Identities = 68/245 (27%), Positives = 131/245 (52%), Gaps = 23/245 (9%)
Query: 20 VEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY-QGKILVFGK-----SPSE-VR 72
V+ ++F ++KGE L + G GAG+T LL + G H +GK+ + GK SP + V+
Sbjct: 283 VDDVSFYVRKGEVLGIYGLVGAGRTELLEAIFGAHPGRTEGKVFIGGKEIKIHSPRDAVK 342
Query: 73 EKVAYVPQTF-SLNFRVPLSVLDVVSMGGLYKK------GLIHFNIPQEVIKRGLEILDF 125
+ VP+ + + +SVL +++ + K GLI + +E+++ +E L+
Sbjct: 343 NGIGLVPEDRKTAGLILQMSVLHNITLPSVVMKLIVRKFGLIDSQLEKEIVRSFIEKLN- 401
Query: 126 LGLKEIAKKSFRE-LSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKI 184
+K + E LSGG +Q+V++A+ L P++LLLDEP +D A+ E +S++
Sbjct: 402 --IKTPSPYQIVENLSGGNQQKVVLAKWLAIKPKVLLLDEPTRGIDVNAKSEIYKLISEM 459
Query: 185 KEDMGITMIITTHDVNPLIEIGDKVMLID--RKLVAFGSPEEVLRDEIIGKVYGPASKAV 242
G+ +++ + ++ ++ + D+++++ RK F EEV ++++ K P S V
Sbjct: 460 AVS-GMGVVMVSSELPEILAMSDRILVMSEGRKTAEF-LREEVTEEDLL-KAAIPRSVKV 516
Query: 243 RVGER 247
+R
Sbjct: 517 ETTQR 521
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 116 bits (289), Expect = 2e-25
Identities = 81/241 (33%), Positives = 133/241 (54%), Gaps = 21/241 (8%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+E NL + K + G++ ++ GE + LLGPNGAGKTT ++ GL + GK+L+
Sbjct: 4 LEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKVLLD 63
Query: 65 G----KSP--SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGG--LYK-KGLIHFNIPQEV 115
G K P R + Y+PQ S+ F+ LSV D + + YK K ++H + Q
Sbjct: 64 GLDVTKDPLNKRARSGIGYLPQESSI-FK-DLSVEDNLLLAAQIFYKDKKILHDKVEQ-- 119
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
+L+ L ++ I + LSGG+++R IAR+LM P+ LLLDEP + +DP A
Sbjct: 120 ------MLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVA 173
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKV 234
E + + ++K +GI ++IT H+V + I D+ +I L+A G+ +E+ ++ + K
Sbjct: 174 EIQTLIKELKR-LGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEIATNKDVKKY 232
Query: 235 Y 235
Y
Sbjct: 233 Y 233
>pir||E82959 zinc transport protein ZnuC PA5500 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9951835|gb|AAG08885.1|AE004962_9 (AE004962) zinc
transport protein ZnuC [Pseudomonas aeruginosa]
Length = 269
Score = 116 bits (289), Expect = 2e-25
Identities = 65/256 (25%), Positives = 135/256 (52%), Gaps = 18/256 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ + + ++ + + ++ G+ + L+GPNGAGKTTL+R + GL + G++
Sbjct: 5 LVRLTQVGVSFNGQAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVW- 63
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
R + Y+PQ ++ +PLSVL + + +P ++ L L
Sbjct: 64 -----RRPRLTIGYMPQKLHVDATLPLSVLRFLRL------------VPGVKREQALAAL 106
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+G + ++ + +SGG+ QRV++ARAL+ PELL+LDEP+ +D + E + K
Sbjct: 107 REVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGK 166
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASKAVR 243
+++ G +++ +HD++ ++ D+V+ ++R + G PE+V D +++G ++++
Sbjct: 167 LRDRYGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFVELFGQDARSLA 226
Query: 244 VGERLYCIIGDVHFRV 259
+ + D+H V
Sbjct: 227 IYHHHHDHAHDLHGEV 242
>gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, ATP-binding subunit
[Methanococcus maripaludis]
Length = 243
Score = 116 bits (289), Expect = 2e-25
Identities = 78/230 (33%), Positives = 130/230 (55%), Gaps = 15/230 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE N+ + ++G+ K+ KGE L+++GP+G+GK+TLLR + GL +G I
Sbjct: 1 MIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFF 60
Query: 64 FGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G ++ +R+K+ V Q F N L+VLD ++ +K L E +
Sbjct: 61 EGDDITDKKVNINKIRQKIGMVFQQF--NLFPHLTVLDNITFAP--RKVLNVSKKEAEEL 116
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
R E+L +GL+ + +LSGGQ+QRV IARAL P+ +L DEP SALDP+ E
Sbjct: 117 AR--ELLKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEV 225
+ ++ + G+TM++ TH++ E+GD+++ I D +++ G+P +V
Sbjct: 175 VLDVMKQLAYE-GMTMVVVTHEMGFAKEVGDRLIFIDDGQILEDGNPSDV 223
>emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyogenes]
Length = 307
Score = 116 bits (288), Expect = 3e-25
Identities = 82/246 (33%), Positives = 132/246 (53%), Gaps = 22/246 (8%)
Query: 2 EYVIEAENLTIMYDSVK----AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY 57
E ++E ++L I + K AV+ F +KKGET L+G +G+GKTT+ R + GL+
Sbjct: 3 EKLVEVKDLEISFGEGKKKFGAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTS 62
Query: 58 QGKILVFGK------SPSEVREKVAYVPQTF-----SLNFRVPLSVLDVVSMGGLYKKGL 106
G+IL GK S SE E + + F SLN R + +D + GLY L
Sbjct: 63 SGQILYDGKVINGRKSKSEANELIRKIQMIFQDPAASLNER---ATVDYIISEGLYNFNL 119
Query: 107 IHFNIPQEVIKRGLEILDFLGL-KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEP 165
F +E ++ ++ +GL E + E SGGQ+QR+ IARAL+ NPE ++ DEP
Sbjct: 120 --FKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIGIARALVMNPEFVIADEP 177
Query: 166 LSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEE 224
+SALD R + + L +++ + G+T + HD++ + I D++ +I + +V EE
Sbjct: 178 ISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEE 237
Query: 225 VLRDEI 230
+ + I
Sbjct: 238 LFNNPI 243
>pir||D69763 ferrichrome ABC transporter (ATP-binding p) homolog yclP - Bacillus
subtilis >gi|1805452|dbj|BAA09014.1| (D50453) homologue
of iron dicitrate transport ATP-binding protein FecE of
E. coli [Bacillus subtilis] >gi|2632683|emb|CAB12190.1|
(Z99106) similar to ferrichrome ABC transporter
(ATP-binding protein) [Bacillus subtilis]
Length = 252
Score = 116 bits (288), Expect = 3e-25
Identities = 71/239 (29%), Positives = 130/239 (53%), Gaps = 13/239 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E N++ Y +E + ++KG+ +GPNGAGK+TLL +++ L G+I +
Sbjct: 1 MVEVRNVSKQYGGKVVLEETSVTIQKGKITSFIGPNGAGKSTLLSIMSRLIKKDSGEIYI 60
Query: 64 FGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-YKKGLIHFNIPQEVIK 117
G+ E+ +K++ + Q +N R L++ D+VS G Y +G + +E
Sbjct: 61 DGQEIGACDSKELAKKMSILKQANQINIR--LTIKDLVSFGRFPYSQG----RLTEEDWV 114
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+ L ++ L++I K +LSGGQ QR IA + + + + LDEPL+ LD K +E
Sbjct: 115 HINQALSYMKLEDIQDKYLDQLSGGQCQRAFIAMVIAQDTDYIFLDEPLNNLDMKHSVEI 174
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVM-LIDRKLVAFGSPEEVLRDEIIGKVY 235
L ++ E++G T++I HD+N D ++ L + ++V G PEE++ ++ ++Y
Sbjct: 175 MKLLKRLVEELGKTIVIVIHDINFASVYSDYIVALKNGRIVKEGPPEEMIETSVLEEIY 233
>pir||A69095 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622836|gb|AAB86176.1| (AE000928) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 311
Score = 116 bits (288), Expect = 3e-25
Identities = 70/228 (30%), Positives = 132/228 (57%), Gaps = 4/228 (1%)
Query: 4 VIEAENLTIMY-DSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
+IE +L+ Y D A+ G+ K+++GE + ++GPNGAGK+TL L G+ G+++
Sbjct: 1 MIELRDLSYSYPDGTPALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKPAAGEVI 60
Query: 63 VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLE 121
+ G+ ++++ + Q + F+ P L ++ G ++ +P+ EV +R E
Sbjct: 61 IDGERVDYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMNLGLPEDEVEERVAE 120
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L+ +G+ ++ LSGG+K+RV IA L PE+++LDEP + LDP+ L
Sbjct: 121 SLEKVGMSGYENRAPHHLSGGEKKRVAIAGILAMKPEIMVLDEPTTGLDPETADGIIRIL 180
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
++ + GIT++I++HDV + + ++V +++ +L+A G+P E+ RD
Sbjct: 181 LELSRE-GITVMISSHDVEIISQFAERVFVLNSGELIAEGTPLEIFRD 227
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 116 bits (288), Expect = 3e-25
Identities = 71/232 (30%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I E +T MY A+ ++FK+++GE L +LGPNGAGK+TL+++L H +G + +
Sbjct: 1 MINVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKI 60
Query: 64 FGKS----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
FGK E+ +++ YVP+ +L LSV + Y K + +++ K
Sbjct: 61 FGKDIVEHSKEILQQIGYVPEKLAL--YPELSVKE-------YLKFISEIKGVKKLKKEI 111
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
++ LKE+ K +LS G +QRV IA AL++NP+L++LDEP + LDP IE
Sbjct: 112 DRVISIFKLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKE 171
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEI 230
L ++ ++ T++ ++H ++ + I ++++++ +VA + E ++++++
Sbjct: 172 FLRELAKES--TILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKL 221
>pir||G72687 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE0919 - Aeropyrum pernix (strain
K1) >gi|5104588|dbj|BAA79903.1| (AP000060) 254aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 254
Score = 116 bits (288), Expect = 3e-25
Identities = 71/249 (28%), Positives = 134/249 (53%), Gaps = 16/249 (6%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
+ ++ E+L + + A++ + ++++G+ LL+GPNG+GKTTL+ V++G + G++
Sbjct: 4 DIILRVEDLEKRFGGIVALDKVNLEIERGKVTLLIGPNGSGKTTLVNVISGFYKPDGGRV 63
Query: 62 L-----VFGKSPSEVRE----KVAYVPQTFSLNFRVPLSVLDVVSMGG--LYKKGL---I 107
L + G SP E+ + + +P+ F+ N V +VL G +Y GL +
Sbjct: 64 LFKGRDITGMSPHEISKLGLVRTFQIPKPFT-NLTVLENVLTAADSPGENVYLAGLARRL 122
Query: 108 HFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLS 167
+ R EIL ++GL + + ELSGGQ + + IARA+M E++++DEP +
Sbjct: 123 WLGFEKRAAARAFEILGWVGLDHMWDRRSGELSGGQMKLLEIARAIMKGAEMIIMDEPAA 182
Query: 168 ALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
++P+ + + + GIT +I H + + E D+V + K++A G P+EVL
Sbjct: 183 GVNPRLAGSIMERIKYLAREKGITFLIIEHRIGLVKEYVDRVYAMSMGKVIASGKPDEVL 242
Query: 227 RDEIIGKVY 235
+ ++ + Y
Sbjct: 243 NNPVVLESY 251
>pir||F81363 probable glutamine transport ATP-binding protein Cj0902 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968340|emb|CAB73160.1| (AL139076) putative
glutamine transport ATP-binding protein [Campylobacter
jejuni]
Length = 242
Score = 116 bits (288), Expect = 3e-25
Identities = 72/233 (30%), Positives = 134/233 (56%), Gaps = 15/233 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE +NL Y ++ ++ + + KG+ + ++GP+G GK+T LR + L G+IL+
Sbjct: 1 MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELADSGEILI 60
Query: 64 FGKSP-------SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
++ +++R+KV+ V Q F N +V++ + + + K G++ +E I
Sbjct: 61 NKQNILDKEIDINKIRQKVSMVFQHF--NLFANKNVMENLCLTPI-KTGILS---QEEAI 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+ +L +GL + +LSGGQKQR+ IAR+LM NP+++L DEP SALDP+ E
Sbjct: 115 KKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
S + + ++ G+TM++ TH++ + +++ +D+ K+ SP+EV +
Sbjct: 175 VLSIMKDVAKE-GLTMLVVTHEMGFARNVANRIFFMDKGKIAVDASPKEVFEN 226
>pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0696 [imported]
- Neisseria meningitidis (group B strain MD58)
>gi|7225924|gb|AAF41113.1| (AE002424) amino acid ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 242
Score = 116 bits (288), Expect = 3e-25
Identities = 70/218 (32%), Positives = 125/218 (57%), Gaps = 14/218 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I+ +N+ + + + G+ ++KKGE +++ GP+G+GK+TL+R + L + G+I V
Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV 60
Query: 64 FGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G + ++ +RE+V +V Q F N L+VL+ +++ + KG ++
Sbjct: 61 DGVNVADPKTDLNKIREEVGFVFQGF--NLYPHLTVLENITLAPMKVKG----QNAEQAE 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+ +E+L+ +GL +LSGGQ+QRV IAR L P ++L DEP SALDP+ E
Sbjct: 115 KKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR 214
+ + E G+TM+ TH++ E+ D+V+ +D+
Sbjct: 175 VLKVMKDLAES-GMTMMCVTHEMGFAREVADRVIFVDK 211
>dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacillus halodurans]
Length = 247
Score = 116 bits (288), Expect = 3e-25
Identities = 88/249 (35%), Positives = 132/249 (52%), Gaps = 20/249 (8%)
Query: 2 EYVIEAENLTIMY-DSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
E ++ E L +Y D ++ + +++GE + ++GP+GAGK+T LR + L G
Sbjct: 3 EMILRVEGLKKVYPDGTVGIKEINTSIRRGELISVIGPSGAGKSTFLRSINRLVEPTSGA 62
Query: 61 ILVFG--------KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-----YKKGLI 107
I V G K ++R K+ V Q ++L R SVL V G L K GL
Sbjct: 63 IFVEGENICNARGKKLRQMRRKIGMVFQHYNLIKRS--SVLQNVLHGRLGYMSTIKGGLG 120
Query: 108 HFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLS 167
F+ + KR L IL +GL+E A K ELSGGQ+QRV IARA+ NP L+L DEP++
Sbjct: 121 RFH--ESDTKRALSILKRVGLEEQALKRADELSGGQQQRVGIARAIAQNPTLILADEPIA 178
Query: 168 ALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
+LDP A + I ++ GIT ++ H V + D+++ I K+V G+P E L
Sbjct: 179 SLDPTASENVLHYMKTICQEEGITTVVNLHQVEFAKKFADRMIGIKAGKIVFDGTPRE-L 237
Query: 227 RDEIIGKVY 235
D + ++Y
Sbjct: 238 TDYTVDQLY 246
>dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system (permease)
[Bacillus halodurans]
Length = 271
Score = 116 bits (288), Expect = 3e-25
Identities = 80/239 (33%), Positives = 125/239 (51%), Gaps = 9/239 (3%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
+ IE +NLT+ YD +E L + KGE +L+G NG GK+TLLR LA L G +L
Sbjct: 2 FSIETKNLTLGYDDTIIIEELDLNIPKGEITVLIGGNGCGKSTLLRSLARLLKPQSGAVL 61
Query: 63 VFGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
+ G S EV K+A +PQ L+V ++ G +GL ++ +
Sbjct: 62 LEGSSIQQLATKEVATKLAILPQ--GPEAPEGLTVYQLIKQGRYPHQGLFKKWTSKDE-E 118
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+ ++ L+ L E+A + LSGGQ+QR IA L + E++LLDEP + LD +IE
Sbjct: 119 KVMQALEATRLTELADRPVDALSGGQRQRAWIAMTLAQDTEIILLDEPTTYLDLTHQIEI 178
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVY 235
L ++ E T+++ HD+N ++ + DR + A G PEEV+ E++ V+
Sbjct: 179 LDLLFELNEREKRTIVMVLHDLNLACRYAHHLIAVKDRTVYAQGKPEEVISCELVRHVF 237
>gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus pyogenes]
Length = 307
Score = 116 bits (288), Expect = 3e-25
Identities = 82/246 (33%), Positives = 132/246 (53%), Gaps = 22/246 (8%)
Query: 2 EYVIEAENLTIMYDSVK----AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY 57
E ++E ++L I + K AV+ F +KKGET L+G +G+GKTT+ R + GL+
Sbjct: 3 EKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTS 62
Query: 58 QGKILVFGK------SPSEVREKVAYVPQTF-----SLNFRVPLSVLDVVSMGGLYKKGL 106
G+IL GK S SE E + + F SLN R + +D + GLY L
Sbjct: 63 SGQILYDGKVINGRKSKSEANELIRKIQMIFQDPAASLNER---ATVDYIISEGLYNFNL 119
Query: 107 IHFNIPQEVIKRGLEILDFLGL-KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEP 165
F +E ++ ++ +GL E + E SGGQ+QR+ IARAL+ NPE ++ DEP
Sbjct: 120 --FKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIGIARALVMNPEFVIADEP 177
Query: 166 LSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEE 224
+SALD R + + L +++ + G+T + HD++ + I D++ +I + +V EE
Sbjct: 178 ISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEE 237
Query: 225 VLRDEI 230
+ + I
Sbjct: 238 LFNNPI 243
>sp|P52648|ZNUC_ECOLI HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDING PROTEIN ZNUC
>gi|7445931|pir||B64948 probable ABC transport system
ATP-binding protein yebM - Escherichia coli
>gi|1736501|dbj|BAA15666.1| (D90828) Sulfate transport
ATP-binding protein CysA. [Escherichia coli]
>gi|1788165|gb|AAC74928.1| (AE000280) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 251
Score = 116 bits (287), Expect = 3e-25
Identities = 71/239 (29%), Positives = 135/239 (55%), Gaps = 22/239 (9%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M ++ EN+++ + + + ++ +LK G+ L LLGPNGAGK+TL+RV+ GL T +G
Sbjct: 1 MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGV 60
Query: 61 ILVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMG-GLYKKGLIHFNIPQEVIKRG 119
I GK ++ YVPQ L+ +PL+V + + G +K+ ++ +KR
Sbjct: 61 IKRNGKL------RIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL------PALKR- 107
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+ + ++LSGG+ QRV++ARAL++ P+LL+LDEP +D ++
Sbjct: 108 ------VQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYD 161
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEV-LRDEIIGKVYGP 237
+ +++ ++ +++ +HD++ ++ D+V+ ++ + G+PE V L E I ++GP
Sbjct: 162 LIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFI-SMFGP 219
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 116 bits (287), Expect = 3e-25
Identities = 81/256 (31%), Positives = 141/256 (54%), Gaps = 31/256 (12%)
Query: 4 VIEAENLTIMYDS----VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQG 59
+I ++++ +Y S V AV+ ++ +KKGE ++G +GAGK++L+R+L GL G
Sbjct: 1 MINLQDVSKVYKSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEKPTSG 60
Query: 60 KILVFGKSPSEV--------REKVAYVPQTFSLNFR--VPLSVLDVVSMGGLYKKGLIHF 109
+ V G +EV R +++ + Q F+L + V +++ + + G+ K
Sbjct: 61 TVEVAGTKINEVNGRGLRKARHEISMIFQHFNLLWSRTVRDNIMFPLEIAGVKKS----- 115
Query: 110 NIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSAL 169
E IKR E++ +GL+ K +LSGGQKQRV IARAL +NP++LL DE SAL
Sbjct: 116 ----ERIKRANELIKLVGLEGKEKSYPSQLSGGQKQRVGIARALANNPKVLLCDEATSAL 171
Query: 170 DPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV--------AFGS 221
DP+ LS I E +G+T+++ TH+++ + +I ++V +++ V F +
Sbjct: 172 DPQTTDSILDLLSDINERLGLTIVLITHEMHVIRKICNRVAVMENGKVVEEGEVLDVFKN 231
Query: 222 PEEVLRDEIIGKVYGP 237
P+E + + +V P
Sbjct: 232 PKEQMTKRFVQQVTEP 247
>pir||B83282 probable ATP-binding component of ABC transporter PA2912 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949005|gb|AAG06300.1|AE004717_6 (AE004717) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 257
Score = 116 bits (287), Expect = 3e-25
Identities = 76/227 (33%), Positives = 131/227 (57%), Gaps = 13/227 (5%)
Query: 16 SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFG-----KSPSE 70
S + + G+ ++ G + L+GPNG+GKT+LLR +G++++ G + P
Sbjct: 16 STELLRGVHLEVPAGSFVGLIGPNGSGKTSLLRCAFRYARPQRGRVVLDGDDLWRQPPRW 75
Query: 71 VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGLKE 130
++A V Q F +F L+V DVV+MG KGL + + +R + L +GL+
Sbjct: 76 AARRIAVVLQEFPEDFG--LAVEDVVAMGRTPHKGLFDGHGADDR-QRVRQALLQVGLEG 132
Query: 131 IAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGI 190
A F LSGG+KQR ++ARAL+ P LL+LDEP + LDP+ ++E L ++ +G+
Sbjct: 133 RAASPFASLSGGEKQRALLARALVQEPRLLILDEPTNHLDPRYQLE----LLRLLRSLGL 188
Query: 191 TMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEVLRDEIIGKVYG 236
+ + + HD+N D++ ++D ++VA G+P EVL +++ +V+G
Sbjct: 189 STLASFHDLNLAAAFCDRLYVLDGGRIVAQGTPTEVLDADLLWRVFG 235
>sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|72464|pir||QRECGQ
glutamine transport protein glnQ - Escherichia coli
>gi|581098|emb|CAA32384.1| (X14180) GlnQ (AA 1-240); gtg
start [Escherichia coli] >gi|1651363|dbj|BAA35481.1|
(D90718) Glutamine transport protein GlnQ. [Escherichia
coli] >gi|1651369|dbj|BAA35491.1| (D90719) Glutamine
transport protein GlnQ. [Escherichia coli]
>gi|1787029|gb|AAC73896.1| (AE000183) ATP-binding
component of glutamine high-affinity transport system
[Escherichia coli K12]
Length = 240
Score = 115 bits (286), Expect = 4e-25
Identities = 74/233 (31%), Positives = 131/233 (55%), Gaps = 15/233 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE +N++ + + + + + +GE ++++GP+G+GK+TLLR + L G ++V
Sbjct: 1 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query: 64 FGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G ++ +R++ V Q F L L+ L+ V G L +G +E
Sbjct: 61 DGLKVNDPKVDERLIRQEAGMVFQQFYLFPH--LTALENVMFGPLRVRGANK----EEAE 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K E+L +GL E A ELSGGQ+QRV IARAL P+++L DEP SALDP+ R E
Sbjct: 115 KLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
+ + E+ G+TM+I TH++ ++ +++ ID+ ++ G+P+ ++++
Sbjct: 175 VLKVMQDLAEE-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQVLIKN 226
>sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7428825|pir||QRECSA
sulfate transport ATP-binding protein cysA - Escherichia
coli >gi|1788761|gb|AAC75475.1| (AE000329) ATP-binding
component of sulfate permease A protein; chromate
resistance [Escherichia coli K12]
>gi|1799841|dbj|BAA16296.1| (D90871) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
>gi|1799851|dbj|BAA16305.1| (D90872) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
Length = 365
Score = 115 bits (286), Expect = 4e-25
Identities = 74/228 (32%), Positives = 124/228 (53%), Gaps = 7/228 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
IE N+ + + + ++ + G+ + LLGP+G+GKTTLLR++AGL G I
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 65 GKSPSEVR---EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
G S + KV +V Q ++L FR ++V D ++ G N + + +
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYAL-FR-HMTVFDNIAFGLTVLPRRERPNAAA-IKAKVTK 119
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
+L+ + L +A + +LSGGQKQRV +ARAL P++LLLDEP ALD + R E L
Sbjct: 120 LLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWL 179
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
++ E++ T + THD E+ D+V+++ + + +P++V R+
Sbjct: 180 RQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWRE 227
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 115 bits (286), Expect = 4e-25
Identities = 75/228 (32%), Positives = 128/228 (55%), Gaps = 10/228 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
VIE ++ Y +A++ ++ + KGE +++ GP+G+GK+TL+R + GL + G+I+V
Sbjct: 3 VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
Query: 64 FGKSPSEVRE--KVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
+ R K+ V Q F N L+VL+ +++ + L QE +R
Sbjct: 63 LPELDERTRRSGKIGMVFQHF--NLFPHLTVLENLTLAPIRTLKLS----AQEAKERAYH 116
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L + + + K +LSGGQ+QRV IAR+L PE+LL DEP SALDP+ E +
Sbjct: 117 FLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVM 176
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
+ +D GITM+ TH++ ++ +VM +D +++ GSPE++ ++
Sbjct: 177 VDLAQD-GITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQN 223
>dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 338
Score = 115 bits (286), Expect = 4e-25
Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 27/240 (11%)
Query: 16 SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEV---- 71
SV AV+G+ K+ +GE ++G +GAGK+TL+R+L L +G ++V GK S++
Sbjct: 17 SVTAVDGVNLKINEGEIFGVIGYSGAGKSTLIRMLNMLERPTEGSVIVAGKDLSKLSDRD 76
Query: 72 ----REKVAYVPQTFSLNFR--VPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDF 125
R+K+ + Q F+L + V ++ + + G+ KK E KR E+++
Sbjct: 77 LRIERQKIGMIFQHFNLLWSRTVRKNIAFPLEIAGVPKK---------EREKRVDELINL 127
Query: 126 LGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIK 185
+GL+ + +LSGGQKQRV IARAL +NP++LL DE SALDPK L I
Sbjct: 128 VGLEGREEAYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPKTTDSILDLLVDIN 187
Query: 186 EDMGITMIITTHDVNPLIEIGDKVMLIDRKLV--------AFGSPEEVLRDEIIGKVYGP 237
E +G+T+++ TH+++ + +I +V +++ V F P+E + E + +V P
Sbjct: 188 EKLGLTIVLITHEMHVIRKICHRVAVMEAGKVVEEGPVLDVFRKPKEHITKEFVKQVTEP 247
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 115 bits (285), Expect = 6e-25
Identities = 77/228 (33%), Positives = 125/228 (54%), Gaps = 5/228 (2%)
Query: 4 VIEAENLTIMY-DSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
+IEA N+ Y D +A++G+ F KKGE + LLGPNGAGK+TL G+ GK+L
Sbjct: 3 IIEAVNIRYTYPDGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTSGKVL 62
Query: 63 VFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-EVIKRGLE 121
V GK + + V Q + F+ P L + G ++ + + EV +R +
Sbjct: 63 VDGKEIDYSKSGLIKVRQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGLDEDEVEERVKD 122
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L +G+ + LSGG+K+RV IA L P++++LDEP S LDP+ + L
Sbjct: 123 ALRKVGMSG-TRTDPHHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQILRLL 181
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEVLRD 228
++ E+ G+T+II+THDV+ D++ +I ++++ G+P +V D
Sbjct: 182 HELNEE-GMTIIISTHDVDLAPLYSDRIYIISGGEIISEGTPGDVFSD 228
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 115 bits (285), Expect = 6e-25
Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
V+E + +T Y + AV L+ +++GE L LLGP+G GKTT LR+LAGL G I +
Sbjct: 26 VLELDGVTKEYGAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGLERPTGGTIEL 85
Query: 64 FGKSPSEVREKVAYVPQTFSLNFR-----VPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
+ + VA + + F+ LSV + V+ G + R
Sbjct: 86 DAQRVAGPDTFVAAEDREIGIVFQDFALFPHLSVAENVAFG-------LTDRDEDATAAR 138
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+L + + E+ +S +LSGGQ+QRV +AR+L P++LLLDEP S LD + R+E
Sbjct: 139 VDEMLALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLRVEMR 198
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEV 225
+ +I ++ G+T + THD + I D+V +L D + G PE V
Sbjct: 199 EEVRRILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDPEGV 246
>gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport system ATP-binding;
UgpC [Halobacterium sp. NRC-1]
Length = 379
Score = 115 bits (285), Expect = 6e-25
Identities = 84/261 (32%), Positives = 133/261 (50%), Gaps = 18/261 (6%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I +LT YDS+ AV+G+ + E L+++GP+G GK+T LR++AGL G I +
Sbjct: 4 ITLTDLTKHYDSIAAVDGIDLDVLDEEFLVVVGPSGCGKSTTLRLIAGLEDATAGTIRIG 63
Query: 65 GK----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
G SP E R+ +A V Q ++L + + M + E+ R
Sbjct: 64 GTDVTDSPPEDRD-IAMVFQNYALYPHMTAAENMTFGMQSVTDYS------SAEIEDRVA 116
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
+ LG+ E+ ++ LSGG++QRV I RAL+ P + LLDEPLS LD K R+ +
Sbjct: 117 DAAATLGITELLDRTPDALSGGERQRVAIGRALVREPSVFLLDEPLSNLDAKLRVHMRAE 176
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRD-----EIIGKVY 235
LSK+ ++ T + THD + +GD+V +++ V +P + L D + G +
Sbjct: 177 LSKLHRELDTTTVYVTHDQTEAMTLGDRVAVLNDGTVQQVAPPQQLYDFPANQFVAGFIG 236
Query: 236 GPASK--AVRVGERLYCIIGD 254
PA VRV +R ++ D
Sbjct: 237 EPAMNLVPVRVRDRPRGLVAD 257
>gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 362
Score = 115 bits (284), Expect = 7e-25
Identities = 81/253 (32%), Positives = 140/253 (55%), Gaps = 35/253 (13%)
Query: 4 VIEAENLTIMYDS-----VKAVEGLTFKLKKGETLLLLGPNGAGKTTL----LRVLAGLH 54
++E NL ++YD +KAV ++F ++KGE L ++G +G+GKTTL LR +
Sbjct: 45 ILEVHNLNVIYDEGNSRIIKAVNDVSFGVEKGEILGIIGESGSGKTTLISAILRAIRPPG 104
Query: 55 TNYQGKIL-----VFGKSPSEVRE----KVAYVPQTF--SLNFRVPLSVL---DVVSMGG 100
GK++ +F + E R+ ++YVPQ +LN +P+S + + +S G
Sbjct: 105 KIISGKVIFNGMDIFSMTIDEFRKLLWKDISYVPQASQNALNPVLPISEIFYHEAISHGE 164
Query: 101 LYKKGLIHFNIPQEVIKRGLEILDFLGLK--EIAKKSFRELSGGQKQRVIIARALMSNPE 158
KK VI+R E+L +GL + K +LSGG KQRV+IA +L+ NP+
Sbjct: 165 ADKK---------RVIERASELLKLVGLDPARVLKMYPFQLSGGMKQRVMIALSLLLNPK 215
Query: 159 LLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV- 217
L+L+DEP SALD + + I ++MG+T++ THD+ + +I ++++++ + V
Sbjct: 216 LILMDEPTSALDMLNQELLLKLIKNINQEMGVTIVYVTHDILNIAQIANRLLVMYKGYVM 275
Query: 218 AFGSPEEVLRDEI 230
G EE+++ +
Sbjct: 276 EEGKTEEIIKSPL 288
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 115 bits (284), Expect = 7e-25
Identities = 77/223 (34%), Positives = 129/223 (57%), Gaps = 15/223 (6%)
Query: 13 MYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK--SPSE 70
M V++++ L+ +++GET LLGPNGAGKTTLL++L G+ G+ + GK +
Sbjct: 63 MNQKVESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRASGGRGTLLGKPIGDRQ 122
Query: 71 VREKVAYVPQT-FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGL- 128
+++V Y+P+ + +F LD + G L++ G QE +R L + D +GL
Sbjct: 123 TKQRVGYLPENAYFYDFLTAWEFLDYI--GSLFQIG------KQERQRRILAMCDLVGLA 174
Query: 129 -KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKED 187
K KK R+ S G QRV +A+AL+++PE++ LDEP+S LDP R + + +KE
Sbjct: 175 QKTAKKKQLRQYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQVREIILSLKE- 233
Query: 188 MGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDE 229
G T+ +H + + +I D++ ++ R +L+ GS EVL ++
Sbjct: 234 QGKTIFFNSHILADVEQICDRIAILARGELLCSGSLAEVLGND 276
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 115 bits (284), Expect = 7e-25
Identities = 82/231 (35%), Positives = 128/231 (54%), Gaps = 18/231 (7%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E VIEA+ LT + A + + F +K+GE LLGPNGAGK+T +++ GL G+
Sbjct: 332 ETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQA 391
Query: 62 LVFG----KSPSEVREKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
LV G +S + R+ + Y+ Q FSL N V ++ + GL + E
Sbjct: 392 LVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRA------QNEK 445
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
I R + + GLK IA + EL G KQR+ +A +LM P++L LDEP S +DP R
Sbjct: 446 ISR---MSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRR 502
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
E ++ + E G+T+++TTH ++ E D++ L+ R KL+A G+P+++
Sbjct: 503 EFWLHINSMVE-KGVTVMVTTHFMDE-AEYCDRIGLVYRGKLIASGTPDDL 551
Score = 75.7 bits (183), Expect = 5e-13
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 14/210 (6%)
Query: 19 AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFG----KSPSEVREK 74
AV L + G L+GP+GAGKTTL+R+LAGL G V G K+ +
Sbjct: 27 AVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAV 86
Query: 75 VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL-EILDFLGLKEIAK 133
+ Y+PQ F L L+V++ +++ + ++ E K+ +L+F L
Sbjct: 87 LGYMPQKFGLY--EDLTVMENLNLYADLR------SVTGEARKQTFARLLEFTSLGPFTG 138
Query: 134 KSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMI 193
+ +LSGG KQ++ +A L+ P++LLLDEP +DP +R E + ++ + G+ ++
Sbjct: 139 RLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGE-GMLIL 197
Query: 194 ITTHDVNPLIEIGDKVMLIDRKLVAFGSPE 223
+T ++ + D +++ + +L+ G P+
Sbjct: 198 WSTSYLDEAEQCRDVLLMNEGELLYQGEPK 227
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 115 bits (284), Expect = 7e-25
Identities = 82/231 (35%), Positives = 128/231 (54%), Gaps = 18/231 (7%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E VIEA+ LT + A + + F +K+GE LLGPNGAGK+T +++ GL G+
Sbjct: 327 ETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQA 386
Query: 62 LVFG----KSPSEVREKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
LV G +S + R+ + Y+ Q FSL N V ++ + GL + E
Sbjct: 387 LVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRA------QNEK 440
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
I R + + GLK IA + EL G KQR+ +A +LM P++L LDEP S +DP R
Sbjct: 441 ISR---MSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRR 497
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
E ++ + E G+T+++TTH ++ E D++ L+ R KL+A G+P+++
Sbjct: 498 EFWLHINSMVE-KGVTVMVTTHFMDE-AEYCDRIGLVYRGKLIASGTPDDL 546
Score = 75.7 bits (183), Expect = 5e-13
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 14/210 (6%)
Query: 19 AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFG----KSPSEVREK 74
AV L + G L+GP+GAGKTTL+R+LAGL G V G K+ +
Sbjct: 22 AVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAV 81
Query: 75 VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL-EILDFLGLKEIAK 133
+ Y+PQ F L L+V++ +++ + ++ E K+ +L+F L
Sbjct: 82 LGYMPQKFGLY--EDLTVMENLNLYADLR------SVTGEARKQTFARLLEFTSLGPFTG 133
Query: 134 KSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMI 193
+ +LSGG KQ++ +A L+ P++LLLDEP +DP +R E + ++ + G+ ++
Sbjct: 134 RLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGE-GMLIL 192
Query: 194 ITTHDVNPLIEIGDKVMLIDRKLVAFGSPE 223
+T ++ + D +++ + +L+ G P+
Sbjct: 193 WSTSYLDEAEQCRDVLLMNEGELLYQGEPK 222
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 115 bits (284), Expect = 7e-25
Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 24/241 (9%)
Query: 4 VIEAENLTIMYDS-----------VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAG 52
VIE NL +Y +A++G+TF++KKGE LLGPNGAGKTT +++L
Sbjct: 3 VIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKILTT 62
Query: 53 LHTNYQGKILVFG----KSPSEVREKVAYVPQ-TFSLNFRVPLSVLDVVSMGGLYKKGLI 107
L G+ V G K E+R+++ V + +L +R+ + L I
Sbjct: 63 LLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRL-------TAYENLRYFASI 115
Query: 108 HFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLS 167
++ +E KR E+L +GL + S G KQR+ IA+AL+++PE+L LDEP
Sbjct: 116 YYIPRREAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTL 175
Query: 168 ALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
LD ++ + + ++ ++ G T+++TTH +N E+ D++ +ID K++A +PE +
Sbjct: 176 GLDVQSAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLK 235
Query: 227 R 227
R
Sbjct: 236 R 236
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 115 bits (284), Expect = 7e-25
Identities = 77/236 (32%), Positives = 133/236 (55%), Gaps = 14/236 (5%)
Query: 7 AENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK 66
AE+L Y + + V+ ++ +K GE + LLGPNGAGKTT ++ GL + QGKI + +
Sbjct: 6 AEHLAKSYKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHDQGKIRIDDQ 65
Query: 67 S----PSEVREK--VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGL 120
P R K + Y+PQ S+ R LSV D + +K L + Q+ R
Sbjct: 66 DISVLPMHDRAKYGIGYLPQEASIFHR--LSVYDNLMAVLQVRKDLNN----QQRKDRAE 119
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
E++ ++ I + LSGG+++RV IARAL +NP+ +LLDEP + +DP + I+
Sbjct: 120 ELISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKI 179
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVY 235
+ +K+ G+ ++IT H+V + + + ++ +++A G+PE++L + + +VY
Sbjct: 180 IVHLKQ-RGLGVLITDHNVRETLNVCQRAYIVGSGQMIANGTPEQILNNPDVKRVY 234
>pir||H70432 ABC transporter - Aquifex aeolicus >gi|2983897|gb|AAC07448.1|
(AE000744) ABC transporter [Aquifex aeolicus]
Length = 247
Score = 114 bits (283), Expect = 1e-24
Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 17/236 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E E + Y + +G++FK++ + + ++G +GAGKTTLLR++ GL +G++ +
Sbjct: 2 IVEFEEVYSGYGNTVVHKGISFKVESSQIVAIVGGSGAGKTTLLRLILGLLKPLKGEVRL 61
Query: 64 FGKSPS--------EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
FGKS ++R+++ V Q FS F ++VL+ V + K+ L +
Sbjct: 62 FGKSIKNLSEEELQKLRDRMGVVFQ-FSALFG-SMTVLENVMYPVIKKRKLDRSIVEMNA 119
Query: 116 IKRGLEILDFLGLK-EIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
+ L GLK E K +ELSGG K++ +ARAL +PELL+LDEP S LDP +
Sbjct: 120 CFK----LSVCGLKPEDFYKYPQELSGGMKKKTALARALSLDPELLILDEPTSGLDPISA 175
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVM-LIDRKLVAFGSPEEVLRDE 229
E + + +++ G T+I+ THD+ P + I DKV+ L + K+V G P+E+ E
Sbjct: 176 EEFDNLIKTVRDTFGTTVIMVTHDL-PSLRICDKVLALREGKIVFDGKPQELFESE 230
>pir||E83478 probable ATP-binding component of ABC transporter PA1339 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947279|gb|AAG04728.1|AE004563_5 (AE004563) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 244
Score = 114 bits (283), Expect = 1e-24
Identities = 76/245 (31%), Positives = 137/245 (55%), Gaps = 18/245 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I +N++ Y + + + ++ KGE +++ GP+G+GK+TL++ + L +G I+V
Sbjct: 1 MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 60
Query: 64 FGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
G S ++ +R +V V Q F L LS+ + +++ + G +E
Sbjct: 61 DGTSIADPKTNLPKLRSRVGMVFQHFELFPH--LSITENLTIAQIKVLG----RSKEEAT 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
K+GL +L+ +GLKE A K +LSGGQ+QRV IARAL +P ++L DEP SALDP+ E
Sbjct: 115 KKGLALLERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNE 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+ ++ + G+TM+ TH++ ++ ++V+ +DR + E+ ++E G V
Sbjct: 175 VLDVMVQLAHE-GMTMMCVTHEMGFARKVANRVIFMDRGQIV----EDCEKEEFFGDVSA 229
Query: 237 PASKA 241
+ +A
Sbjct: 230 RSERA 234
>dbj|BAB04800.1| (AP001510) ferrichrome ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 274
Score = 114 bits (283), Expect = 1e-24
Identities = 74/240 (30%), Positives = 129/240 (52%), Gaps = 13/240 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I E+L+I Y K VE L + +G+ ++G NG GK+T+L+ ++ +H G +
Sbjct: 3 IIYTESLSIGYGDTKIVEDLNIAIPEGKITTIIGANGCGKSTILKTISRIHAPQSGVAYL 62
Query: 64 FGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-YKKGLIHFN-IPQEVI 116
GK+ ++ +K+A +PQT L+V ++VS G ++KG +++
Sbjct: 63 DGKAIHKQKTRDIAKKMAILPQTPESPGE--LTVYELVSYGRFPHQKGFGRLTEADHQIV 120
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
++ L GL+E + + LSGGQ+QRV IA AL LLLLDEP + LD ++E
Sbjct: 121 EKALHST---GLEEFRHRPIQALSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDMAHQLE 177
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVY 235
L K+ E G T+++ HD+N D ++ + + +V G+PE+V+ +++ V+
Sbjct: 178 VLLLLKKLNEQEGRTIVMVLHDLNHAARFSDYLIALRKGTVVKEGTPEDVMCSDVLRDVF 237
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 114 bits (283), Expect = 1e-24
Identities = 79/230 (34%), Positives = 122/230 (52%), Gaps = 13/230 (5%)
Query: 5 IEAENLTIMYDSVK-AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+E + L + S AV+ ++ + GE L+GP+G GKTT LR++AG T +G+I+
Sbjct: 4 VELQGLVRAFGSTTTAVDDVSVSIADGEFFTLVGPSGCGKTTTLRLIAGFETPDRGEIVF 63
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
+S S V + V F P ++V + V+ G + F P +
Sbjct: 64 GDRSVSGVPPEDRDVGIVFQSYALFPHMTVRENVAYG-------LRFREPPGGASTEERV 116
Query: 123 LDFLGLKEIAKKSFRE---LSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+ L L ++A RE LSGGQ+QRV +ARAL P +LLLDEP+SALD + R
Sbjct: 117 SELLSLVDLAGTGDREPAALSGGQQQRVALARALAPGPSVLLLDEPMSALDARLRDRLRG 176
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRD 228
T+ +I+ ++ IT + THD + I D+V ++ D +V G+PE V R+
Sbjct: 177 TIKEIQRELDITTVYVTHDQAEALSISDRVAVMRDGAVVQVGTPEAVYRE 226
>gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, component A2-like
[Methanococcus jannaschii]
Length = 555
Score = 114 bits (283), Expect = 1e-24
Identities = 89/286 (31%), Positives = 141/286 (49%), Gaps = 59/286 (20%)
Query: 4 VIEAENLTIMYDSVKAVEGL-----TFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQ 58
+I+ N++ Y V E L +F +K+GE L ++GP+G GKT ++R++AGL +
Sbjct: 254 IIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVGKTVIMRLMAGLELPDE 313
Query: 59 GKILV-------FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH--- 108
GKI+V +G E+R+++ + Q FSL + + L +G +K + H
Sbjct: 314 GKIIVDGIDITNYGWERIELRKRIGIMHQEFSLPYYQTVENLLKYRLGLKGEKAIAHAKA 373
Query: 109 ------------------FNIPQ-----EVIKRGL-------------------EILDFL 126
++P+ ++ K GL EIL+ L
Sbjct: 374 KAEELGLSPKIVDALYQLIDVPESERISKLQKMGLTEDIIYKLFPPVVESFEPEEILEAL 433
Query: 127 GL-KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIK 185
L K+I KK ELSGGQK RV +A L++ P++L LDEP LDP + + L I
Sbjct: 434 DLGKDILKKKVIELSGGQKVRVAMALQLITKPKILFLDEPFGDLDPITLRDVANYLKIIN 493
Query: 186 EDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEVLRDEI 230
E G T+++ +H V + EI D+ +L+D +LV G+PEEV + I
Sbjct: 494 ERFGTTIVLVSHCVEFIKEISDRAILLDENRLVMEGNPEEVCEEFI 539
Score = 97.9 bits (240), Expect = 1e-19
Identities = 72/261 (27%), Positives = 137/261 (51%), Gaps = 8/261 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
++ +NLT Y KA++ ++F+ KKGE L ++G +GAGK+TL+R+L G +G++ +
Sbjct: 4 VKVKNLTKKYGDFKALDKVSFEAKKGEILGIVGKSGAGKSTLIRILRGSLDYDEGEVEIL 63
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLS--VLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
G+ + ++ + F+L ++ + + ++ + L +E K +EI
Sbjct: 64 GRKDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEEEWEEYEKTAIEI 123
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPE----LLLLDEPLSALDPKARIEAT 178
L +GL+ LSGG+KQR+I+ R + E +LLLDEP + P ++ +
Sbjct: 124 LKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEPATMACPASKQKLL 183
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVYGP 237
+ I++ +GIT+IIT+H + D+++L++ K+ G EEVL +E + K+ P
Sbjct: 184 DVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEEVL-NEFLKKMKPP 242
Query: 238 ASKAVRVGERLYCIIGDVHFR 258
+ + + + +V R
Sbjct: 243 YKRTPNIKDNAIIQVRNVSKR 263
>pir||D64507 methyl coenzyme M reductase system, component A2 homolog -
Methanococcus jannaschii
Length = 558
Score = 114 bits (283), Expect = 1e-24
Identities = 89/286 (31%), Positives = 141/286 (49%), Gaps = 59/286 (20%)
Query: 4 VIEAENLTIMYDSVKAVEGL-----TFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQ 58
+I+ N++ Y V E L +F +K+GE L ++GP+G GKT ++R++AGL +
Sbjct: 257 IIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVGKTVIMRLMAGLELPDE 316
Query: 59 GKILV-------FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH--- 108
GKI+V +G E+R+++ + Q FSL + + L +G +K + H
Sbjct: 317 GKIIVDGIDITNYGWERIELRKRIGIMHQEFSLPYYQTVENLLKYRLGLKGEKAIAHAKA 376
Query: 109 ------------------FNIPQ-----EVIKRGL-------------------EILDFL 126
++P+ ++ K GL EIL+ L
Sbjct: 377 KAEELGLSPKIVDALYQLIDVPESERISKLQKMGLTEDIIYKLFPPVVESFEPEEILEAL 436
Query: 127 GL-KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIK 185
L K+I KK ELSGGQK RV +A L++ P++L LDEP LDP + + L I
Sbjct: 437 DLGKDILKKKVIELSGGQKVRVAMALQLITKPKILFLDEPFGDLDPITLRDVANYLKIIN 496
Query: 186 EDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEVLRDEI 230
E G T+++ +H V + EI D+ +L+D +LV G+PEEV + I
Sbjct: 497 ERFGTTIVLVSHCVEFIKEISDRAILLDENRLVMEGNPEEVCEEFI 542
Score = 97.9 bits (240), Expect = 1e-19
Identities = 72/261 (27%), Positives = 137/261 (51%), Gaps = 8/261 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
++ +NLT Y KA++ ++F+ KKGE L ++G +GAGK+TL+R+L G +G++ +
Sbjct: 7 VKVKNLTKKYGDFKALDKVSFEAKKGEILGIVGKSGAGKSTLIRILRGSLDYDEGEVEIL 66
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLS--VLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
G+ + ++ + F+L ++ + + ++ + L +E K +EI
Sbjct: 67 GRKDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEEEWEEYEKTAIEI 126
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPE----LLLLDEPLSALDPKARIEAT 178
L +GL+ LSGG+KQR+I+ R + E +LLLDEP + P ++ +
Sbjct: 127 LKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEPATMACPASKQKLL 186
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVYGP 237
+ I++ +GIT+IIT+H + D+++L++ K+ G EEVL +E + K+ P
Sbjct: 187 DVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEEVL-NEFLKKMKPP 245
Query: 238 ASKAVRVGERLYCIIGDVHFR 258
+ + + + +V R
Sbjct: 246 YKRTPNIKDNAIIQVRNVSKR 266
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 114 bits (282), Expect = 1e-24
Identities = 82/240 (34%), Positives = 131/240 (54%), Gaps = 23/240 (9%)
Query: 1 MEYVIEAENLTIMYD---------SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLA 51
M Y +EAE L Y +++A++G+ K+ +G LLGPNGAGKTTL+++L+
Sbjct: 1 MGYAVEAEALVKEYRMGLLPWRARTIRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILS 60
Query: 52 GLHTNYQGKILVFG----KSPSEVREKVAYV-PQTFSLNFRVPLSVLDVVSMGGLYKKGL 106
L G V G + + VR ++ V +L +R+ L+
Sbjct: 61 TLLLPDSGWARVAGFDVVREANNVRSRIGVVLGGERALYWRLS-------GWDNLWFFSQ 113
Query: 107 IHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPL 166
++ P+E +R E+L+ +GL+E A S G KQR+ IAR L+++PE+LLLDEP
Sbjct: 114 LYGIPPREAKRRVKELLEIVGLEEWAHVRVENYSKGMKQRLHIARGLINDPEVLLLDEPT 173
Query: 167 SALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
LDPKA E S + +I + G T+++TTH + E+ D+V +I + ++VA G PE++
Sbjct: 174 IGLDPKAAREVRSIIRRIVRE-GRTVLLTTHYMVEAEELSDRVAIISKGRIVAEGPPEDL 232
>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
B1496_F3_97 [Mycobacterium leprae]
>gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 315
Score = 113 bits (281), Expect = 2e-24
Identities = 74/231 (32%), Positives = 119/231 (51%), Gaps = 20/231 (8%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E VI + Y S+ AV L + E L LLGPNGAGKTT + + G G I
Sbjct: 12 EVVIRLRGVCKHYGSILAVSNLDLDIHSAEVLALLGPNGAGKTTTVEMCEGFVRPDAGTI 71
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH--FNIPQEVIKRG 119
V G P T + R + V+ + GG Y N+
Sbjct: 72 EVLGLDPI-----------TDNARLRARIGVM--LQGGGGYPAARAGEMLNLVASYAADP 118
Query: 120 LE---ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
L+ +L+ LGL ++A+ ++R LSGGQ+QR+ +A L+ PEL+ LDEP + +D AR+
Sbjct: 119 LDPEWLLETLGLTDVARTTYRRLSGGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLL 178
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
+ ++ D G+T+++TTH + E+ D++++ID +++A G+P E++
Sbjct: 179 VWELIDTLRRD-GVTVVLTTHQLKEAEELADRLVIIDHGRMIAAGTPTELM 228
>gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 617
Score = 113 bits (281), Expect = 2e-24
Identities = 77/225 (34%), Positives = 131/225 (58%), Gaps = 12/225 (5%)
Query: 12 IMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSE- 70
I+ + + AV ++F+LKKG L+G +G GK+T+ ++LAG+ GKI++ GK SE
Sbjct: 373 ILSEPINAVNDVSFELKKGTITALVGGSGHGKSTIAKILAGMIQQTSGKIILLGKDVSEY 432
Query: 71 -VREKVAYVPQTFSLNFRVPLSVLDV--VSMGGLYKKGLIHFNI--PQEVIKRGLEILDF 125
VR + Y + + F+ P S LD + + LIH + +++ + +E+L
Sbjct: 433 GVRNSMWY-KENVQMIFQDPYSSLDPRHTVRWHVERPLLIHKKVSNKDQLLPKIIEVLKN 491
Query: 126 LGLKEIAKKSFR---ELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+GLK K ++ ELSGG++QRV IARA P++L+ DEP+S LD R + +
Sbjct: 492 VGLKPPEKYLYKYPHELSGGERQRVAIARATAVEPKVLVADEPVSMLDASLRAGILNLIK 551
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
K K++ GI+++ THD+ + I D++M+I + ++V G+ EV+
Sbjct: 552 KFKKN-GISILYITHDIATVNYIADEIMVIYKGRIVEKGNTYEVI 595
Score = 99.5 bits (244), Expect = 4e-20
Identities = 69/246 (28%), Positives = 129/246 (52%), Gaps = 24/246 (9%)
Query: 1 MEYVIEAENLTIMYDS----VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTN 56
M+ +++ LT Y + V V + F++ E + G +G GK+TL + GL
Sbjct: 5 MDSLLKVNELTAGYFNQDGFVIGVTNVNFEVYPNEIFAIAGESGCGKSTLAMAIYGL-LK 63
Query: 57 YQGKIL----------VFGKSPSEVRE----KVAYVPQTFSLNFRVPLSVLDVVSMGGLY 102
Y G +L + + E+R+ + YVPQ F+++ P++ + M
Sbjct: 64 YPGVVLRGHVYLKDKDILSITQEELRKLRMKEFVYVPQ-FAMDALDPVAKIGDQMMRAAV 122
Query: 103 KKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLL 162
G ++ +++IK LE++D + ELSGG +QRV+IA +++ NP L++L
Sbjct: 123 SHG-VNVEEARKLIKEKLELVDLP--YNVVNMYPHELSGGMRQRVVIATSILLNPSLIIL 179
Query: 163 DEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGS 221
DEP + LD + E L +I+ +G++++I +HD++ L+ I D+V ++ ++V GS
Sbjct: 180 DEPTTGLDVIVQYEILKDLKRIQRQLGVSLVIISHDISMLLMISDRVGIMYAGEIVEIGS 239
Query: 222 PEEVLR 227
EE+++
Sbjct: 240 KEEIIK 245
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 113 bits (281), Expect = 2e-24
Identities = 73/238 (30%), Positives = 129/238 (53%), Gaps = 14/238 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ A+NL Y + VE ++ + GE + LLGPNGAGKTT ++ G+ G I++
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query: 65 GKSPS------EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
S R + Y+PQ S+ R LSV D + + L ++ R
Sbjct: 64 DDDISLLPLHARARRGIGYLPQEASIFRR--LSVYDNLMAVLQIRDDLS----AEQREDR 117
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+++ ++ + + LSGG+++RV IARAL +NP+ +LLDEP + +DP + I+
Sbjct: 118 ANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK 177
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVY 235
+ ++ D G+ ++IT H+V + + ++ ++ + L+A G+P E+L+DE + +VY
Sbjct: 178 RIIEHLR-DSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVY 234
>sp|P45031|YRBF_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1087
>gi|1075226|pir||B64182 hypothetical protein HI1087 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574641|gb|AAC22743.1| (U32788) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 264
Score = 113 bits (281), Expect = 2e-24
Identities = 68/229 (29%), Positives = 126/229 (54%), Gaps = 3/229 (1%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE +NLT + L ++KKG+ ++GP+G GKTTLL+++ G QG+IL
Sbjct: 5 LIEVKNLTFKRGDRVIYDNLNLQVKKGKITAIMGPSGIGKTTLLKLIGGQLMPEQGEILF 64
Query: 64 FGKSPSEVREKVAY-VPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR-GLE 121
G+ + + Y V + + F+ D+ + + H ++P+ +I++ L
Sbjct: 65 DGQDICRLSNRELYEVRKRMGMLFQSGALFTDISTFDNVAFPIREHTHLPENLIRQIVLM 124
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
L+ +GL+ A ELSGG +R +ARA+ +P+L++ DEP + DP + S +
Sbjct: 125 KLEAVGLRGAAALMPSELSGGMARRAALARAIALDPDLIMFDEPFTGQDPISMGVILSLI 184
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDE 229
++ E + +T I+ +HDV ++ I D +I D+K++A G+ E++L+ +
Sbjct: 185 KRLNEALNLTSIVVSHDVEEVLSIADYAYIIADQKVIAEGTSEQLLQSQ 233
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 113 bits (281), Expect = 2e-24
Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 25/263 (9%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M+Y IE +LT +Y KAV+ L K++K LGPNGAGKTT +++L L G
Sbjct: 1 MKYAIETFDLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGT 60
Query: 61 ILVFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
V G K+P EVR+++ VPQ SL L+ + V M + + +P+++
Sbjct: 61 ARVAGYDILKNPDEVRQQIGMVPQKVSL--YEDLTARENVEMCADF------YGMPEDLK 112
Query: 117 KRGL-EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
+ + E+++ + +K A K ++SGGQ+Q+V + +L+ P++L LDEP LDP +
Sbjct: 113 ESRIEELMELVDIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKR 172
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSP----------EE 224
+ ++ G T+I+ +HD+ + + D V +I++ L AF +P EE
Sbjct: 173 VLWDLIDELNSS-GHTIILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKDTVIKEEE 231
Query: 225 VLRDEIIGKVYGPASKAVRVGER 247
LR + IG + K ER
Sbjct: 232 SLRAKEIGGILDRIDKETPESER 254
>pir||B71128 probable iron (III) dicitrate transport ATP-binding protein -
Pyrococcus horikoshii >gi|3257201|dbj|BAA29884.1|
(AP000003) 241aa long hypothetical iron (III) dicitrate
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 241
Score = 113 bits (281), Expect = 2e-24
Identities = 84/250 (33%), Positives = 133/250 (52%), Gaps = 23/250 (9%)
Query: 1 MEYVIEAE-NLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQG 59
M ++ E E +++ Y + +A+ + FK KKGE L ++GPNG+GK+TLL+ +AG+ +G
Sbjct: 1 MSFMPELEVDISFSYGNFEALRDVKFKAKKGELLAIIGPNGSGKSTLLKCIAGI-LKPRG 59
Query: 60 KILVFG-----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE 114
KI+ G P E + V+YVPQ+ F +V + V +G + G I ++
Sbjct: 60 KIVYDGINLLNLKPKERAKIVSYVPQSSFPQF--SFTVEEFVELGTYARGGDI-----ED 112
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
+KR +GL E + LSGG+ Q +IARAL E++LLDEP S LD
Sbjct: 113 ALKR-------VGLVEKRHELITRLSGGEYQLALIARALAQGSEVMLLDEPTSHLDINHT 165
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKV 234
+ L ++K++ +I HD+N I D+++++ VA+ L E+IGKV
Sbjct: 166 KKVIEILQELKKEK--LIIAVFHDLNLAINYSDELLVLKNGEVAWLGDPNSLPLEVIGKV 223
Query: 235 YGPASKAVRV 244
YG K + V
Sbjct: 224 YGIVPKFLEV 233
>pir||H72704 probable iron (III) dicitrate transport ATP-binding protein APE1055
- Aeropyrum pernix (strain K1)
>gi|5104725|dbj|BAA80040.1| (AP000060) 250aa long
hypothetical iron (III) dicitrate transport ATP-binding
protein [Aeropyrum pernix]
Length = 250
Score = 113 bits (281), Expect = 2e-24
Identities = 85/245 (34%), Positives = 124/245 (49%), Gaps = 22/245 (8%)
Query: 5 IEAENLTIMYD-SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+ E + Y+ S + G++F L G + LLGPNG+GKTTLLR+LAG+ +G++ V
Sbjct: 7 VRLEGVEARYNTSPPVLRGVSFSLDPGSLVALLGPNGSGKTTLLRLLAGIIKPSRGRVEV 66
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG---- 119
G P VR + Y P + ++ R L V + LY+ G+ E + G
Sbjct: 67 CGSPPGRVRRMLGYAPASPEVDPR-----LKAVEVALLYRYGV------SEGVAWGRRDW 115
Query: 120 ---LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
L L +G+ E+A + + ELS GQ++ VI+A L P L LLDEP S LD
Sbjct: 116 EEVLAALGEMGVGELAWRRWGELSSGQRRLVILAGVLARRPGLALLDEPHSFLDVSNMRR 175
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
T L ++ T++ TTHD + +ML + L A G PE V+ E I +VYG
Sbjct: 176 VTLVLRSLRG--RATIVYTTHDPLAAMAADSVIMLREGLLHAQGPPEAVVTPETIEEVYG 233
Query: 237 -PASK 240
PA +
Sbjct: 234 IPADR 238
>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis (strain
H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
hypothetical protein Rv1458c [Mycobacterium
tuberculosis]
Length = 313
Score = 113 bits (280), Expect = 2e-24
Identities = 75/232 (32%), Positives = 119/232 (50%), Gaps = 20/232 (8%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E V+ + Y S+ AV L + E + LLGPNGAGKTT + + G G I
Sbjct: 9 EVVLRLRGVCKRYGSITAVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAGSI 68
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH--FNIPQEVIKRG 119
V G P T + R + V+ + GG Y ++
Sbjct: 69 EVLGLDPI-----------TDNARLRARIGVM--LQGGGGYPAARAGEMLDLVASYAANP 115
Query: 120 LE---ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
L+ +LD LGL E A+ ++R LSGGQ+QR+ +A AL+ P+L+ LDEP + +D AR+
Sbjct: 116 LDPHWLLDTLGLTEAARTTYRRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVL 175
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKL-VAFGSPEEVLR 227
+ ++ D G+T+++TTH + E+ D++++ID + VA G+P E++R
Sbjct: 176 VWELIDALRRD-GVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMR 226
>sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA >gi|7442619|pir||G69669
choline ABC transporter (ATP-binding protein) opuBA -
Bacillus subtilis >gi|2293447|gb|AAC14356.1| (AF008930)
ATPase [Bacillus subtilis] >gi|2635886|emb|CAB15378.1|
(Z99121) choline ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 381
Score = 113 bits (280), Expect = 2e-24
Identities = 77/255 (30%), Positives = 130/255 (50%), Gaps = 42/255 (16%)
Query: 4 VIEAENLTIMYDS-VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
++ EN++ Y KAV + K+ KGE + +GP+G GKTT ++++ L GKI
Sbjct: 1 MLTLENVSKTYKGGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIF 60
Query: 63 VFGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIP----- 112
+ G++ P E+R K+ YV Q GL+ I NI
Sbjct: 61 IDGENIMDQDPVELRRKIGYVIQQI-----------------GLFPHMTIQQNISLVPKL 103
Query: 113 -----QEVIKRGLEILDFLGL-KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPL 166
Q+ +R E+L + + E + ELSGGQ+QR+ + RAL + P L+L+DEP
Sbjct: 104 LKWPEQQRKERARELLKLVDMGPEYVDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPF 163
Query: 167 SALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
ALDP R K+++ + T++ THD++ I++ D+++++ ++V G+P+++
Sbjct: 164 GALDPITRDSLQEEFKKLQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDI 223
Query: 226 LR-------DEIIGK 233
LR +E IGK
Sbjct: 224 LRNPADEFVEEFIGK 238
>pir||S77405 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1652587|dbj|BAA17508.1| (D90906) cytoplasmic
membrane protein for maltose uptake [Synechocystis sp.]
Length = 408
Score = 113 bits (279), Expect = 3e-24
Identities = 72/251 (28%), Positives = 130/251 (51%), Gaps = 30/251 (11%)
Query: 16 SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVREKV 75
+V ++ + ++ GE ++L+GP+G GK+TLLR++AGL T G IL+ + +++ K
Sbjct: 26 TVNVLKAINLEIADGEFMVLVGPSGCGKSTLLRLIAGLETVTGGNILIGDRRVNDLPPKA 85
Query: 76 AYVPQTFSLNFRVP-LSVLDVVSMG-------------------------GLYK---KGL 106
+ F P LSV D ++ G G+ K K L
Sbjct: 86 RDIAMVFQSYALYPHLSVYDNIAFGLRRMLDRENNQTEDKFPRWVGDSLRGITKPLPKSL 145
Query: 107 IHFNIPQEVI-KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEP 165
+ + ++V+ +R ++ L + + + ++LSGGQKQRV + RA+ NP++ L+DEP
Sbjct: 146 HYLSAQEKVLAQRVNQVAQQLQIDHLLDRLPKQLSGGQKQRVALGRAIARNPQVFLMDEP 205
Query: 166 LSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEV 225
LS LD K R E S + +I+ +G T I THD + +GD++ ++++ ++ +P
Sbjct: 206 LSNLDAKLRAETRSQIVQIQRQLGTTTIYVTHDQTEAMTMGDRIAVLNQGVIQQIAPPLT 265
Query: 226 LRDEIIGKVYG 236
L ++ + G
Sbjct: 266 LYNQPANRFVG 276
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 113 bits (279), Expect = 3e-24
Identities = 73/218 (33%), Positives = 118/218 (53%), Gaps = 18/218 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M +I+ +LT MY S K+V+ L +K+G+ LG NGAGKTT +R+L GL G+
Sbjct: 1 MSTIIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQ 60
Query: 61 ILVFG----KSPSEVREKVAYVPQT--FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE 114
I +FG K+ E+ ++ + + F N ++L + G++KK I
Sbjct: 61 IEIFGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNAID------ 114
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
E+L+ +GL+ KK + S G KQR+ IARAL+ PELL+LDEP + LDP
Sbjct: 115 ------EVLEIVGLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGI 168
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI 212
E + + ++ IT+ I++H ++ + ++ D V +I
Sbjct: 169 KEMRRLIHSLAKERNITIFISSHILSEIEQLVDHVGII 206
>gb|AAC46148.1| (U50597) YfeB [Yersinia pestis]
Length = 296
Score = 113 bits (279), Expect = 3e-24
Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 9/234 (3%)
Query: 8 ENLTIMYDSVK-AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGK 66
+N+T+ Y++ A+ +F L G L+G NG+GK+TL + + GL GK+ + K
Sbjct: 14 DNVTVTYNNGHTAIYDASFSLTGGTICALVGVNGSGKSTLFKSIMGLVKPSVGKVELSHK 73
Query: 67 SPSEVREK--VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE--VIKRGLEI 122
S ++ +AYVPQT +++ P+ V DVV MG K + ++ ++ + +E
Sbjct: 74 PISHALKQNTIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDKAIVNKSIER 133
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
+ GL + + ELSGGQK+RV +ARAL LLLLDEP + +D K L
Sbjct: 134 V---GLTALRSRQIGELSGGQKKRVFLARALAQQGTLLLLDEPFTGVDVKTENAIIELLQ 190
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
++ D G ++++TH++ + E D V+LI++ ++A G E + + +G
Sbjct: 191 SLR-DEGHLILVSTHNLGSVPEFCDHVILINQTVLAAGPIETTFTQKNLEMTFG 243
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 113 bits (279), Expect = 3e-24
Identities = 74/242 (30%), Positives = 141/242 (57%), Gaps = 20/242 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I ENL + S + ++G+ F + GE LLGPNG+GK+T +R+L+G+ T+++GK++V
Sbjct: 1 MIIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMV 60
Query: 64 FG----KSPSEVREKVAYVPQTFSL-NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI-K 117
G + P +V+E V YVP+T +L P + GG+ + IPQ+++ +
Sbjct: 61 AGVDVSRDPMKVKEIVGYVPETPALYESLTPAEFFSFI--GGVRR-------IPQDILEE 111
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
R ++D G+ + + LS G KQ++ + AL+ +P++L+LDE ++ LDPK+
Sbjct: 112 RVKRLVDAFGIGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIF 171
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPE---EVLRDEIIGK 233
L + KE+ G +++ +TH + + D++ +I + ++VA G+ + E+ R+E +
Sbjct: 172 RELLFEFKEE-GKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKLED 230
Query: 234 VY 235
++
Sbjct: 231 IF 232
>pir||C75255 iron ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460417|gb|AAF12128.1|AE002088_5
(AE002088) iron ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 274
Score = 113 bits (279), Expect = 3e-24
Identities = 83/246 (33%), Positives = 133/246 (53%), Gaps = 20/246 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++EA + + AV G+ + GE ++GPNGAGK+TLLR L GL G++ +
Sbjct: 18 LLEARGVHVRAGQTLAVRGVDATFRTGEFAAIIGPNGAGKSTLLRALLGLSGLEAGEVRL 77
Query: 64 FGK-----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMG---GLYKKGLIHFN----I 111
G+ + +E ++AY+ Q+ L V DVV++G G ++ GL+
Sbjct: 78 NGRPLRTWNRAERSRRLAYLAQSEPLPPET--RVRDVVTLGRGAGEWRWGLLPTRPWSEA 135
Query: 112 PQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDP 171
+E + R L+ D + + ELSGG+ QRV +ARAL + PELLLLDEP + LD
Sbjct: 136 DEEAVNRALDRTD---TRRFEDRRVSELSGGEGQRVALARALAAGPELLLLDEPTNHLDL 192
Query: 172 KARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEI 230
++ +L + + + G+ +I HD+N L D+++L+ R +++A G+P EVL E
Sbjct: 193 AYTLDLMRSLRR-EVEAGLGVIAVLHDLN-LAARADRLLLLSRGEVLATGTPAEVLTPEH 250
Query: 231 IGKVYG 236
I YG
Sbjct: 251 IAAAYG 256
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 113 bits (279), Expect = 3e-24
Identities = 70/232 (30%), Positives = 134/232 (57%), Gaps = 17/232 (7%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
+++I+ +++ Y ++ + +KKGE +++ GP+G+GK+T++R + L + +G+I
Sbjct: 8 DFMIQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQI 67
Query: 62 LVFGKSPSE-------VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE 114
+V G +E VR +V Q F N L+VL+ ++ ++ K +P++
Sbjct: 68 IVAGNELTEDLKNIELVRREVGMCFQHF--NLFPHLTVLENCTLAPIWVK-----KMPKD 120
Query: 115 VIKR-GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKA 173
+ ++ L + + E A K +LSGGQ+QRV IAR+L NP+++L DEP SALDP+
Sbjct: 121 KAEEIAMKYLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPEM 180
Query: 174 RIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEE 224
E + ++ E+ G+TM+ TH++ E+ D+V+ +D +++ +P+E
Sbjct: 181 VREVLDVMVELAEE-GMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKE 231
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 113 bits (279), Expect = 3e-24
Identities = 79/255 (30%), Positives = 133/255 (51%), Gaps = 22/255 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+IE NLT Y S AV L+ ++ G+ LG NGAGKTT +R+L GL +G I +
Sbjct: 7 IIEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGNIKI 66
Query: 64 FGK----SPSEVREKVAYVPQT--FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
F K + +E+ + + + +T F N ++ + G+ K+ I
Sbjct: 67 FEKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQKENAIE--------- 117
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
E+L+ +GL K F+ S G KQR+ IARAL+ NPELL+LDEP + LDP E
Sbjct: 118 ---EVLEIVGLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEI 174
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGP 237
+ + + IT++I++H ++ + ++ DKV +I ++ EE++ +++ K
Sbjct: 175 RKLIKDLAQSRNITILISSHILSEIEQLVDKVGIIHNGVLL----EEIMYEDLKKKNRQF 230
Query: 238 ASKAVRVGERLYCII 252
S +V E++ C++
Sbjct: 231 ISISVSDEEKVACLL 245
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 112 bits (278), Expect = 4e-24
Identities = 73/238 (30%), Positives = 129/238 (53%), Gaps = 14/238 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ A+NL Y + VE ++ + GE + LLGPNGAGKTT ++ G+ G I++
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNIIID 63
Query: 65 GKSPS------EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
S R + Y+PQ S+ R LSV D + + L ++ R
Sbjct: 64 DDDISLLPLHARARRGIGYLPQEASIFRR--LSVYDNLMAVLQIRDDLS----AEQREDR 117
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+++ ++ + + LSGG+++RV IARAL +NP+ +LLDEP + +DP + I+
Sbjct: 118 ANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK 177
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVY 235
+ ++ D G+ ++IT H+V + + ++ ++ + L+A G+P E+L+DE + +VY
Sbjct: 178 RIIEHLR-DSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVY 234
>pir||H72275 phosphate ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981816|gb|AAD36335.1|AE001781_6 (AE001781)
phosphate ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 251
Score = 112 bits (278), Expect = 4e-24
Identities = 81/243 (33%), Positives = 128/243 (52%), Gaps = 26/243 (10%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY--- 57
ME +IE EN + Y AV+ +T K+ K + ++GP+G GKTTLLR + ++ +
Sbjct: 1 MEPIIEIENFSAYYGEKIAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHLPGF 60
Query: 58 --QGKILVFGKS-------PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMG----GLYKK 104
+GKI G+ +E R++V V F P+S+ D V+ G G+ K
Sbjct: 61 RVEGKIYFKGQDIYDPQLDVTEYRKRVGMV---FQKPTPFPMSIYDNVAFGPRIHGVKSK 117
Query: 105 GLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDE 164
++ + + + K L + +K KS LSGGQ+QR+ IARAL PE++LLDE
Sbjct: 118 HILDRIVEESLKKAAL----WDEVKSELNKSGTRLSGGQQQRLCIARALAVEPEVILLDE 173
Query: 165 PLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPE 223
P SALDP A L ++ E+ T++I TH++ I I D + + R +L+ +G
Sbjct: 174 PTSALDPIATQRIEKLLEELSEN--YTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTR 231
Query: 224 EVL 226
E++
Sbjct: 232 EIV 234
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 112 bits (278), Expect = 4e-24
Identities = 76/232 (32%), Positives = 119/232 (50%), Gaps = 13/232 (5%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y+IE + LT + V L K+ KG LGPNGAGKTT +++L G G+I
Sbjct: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Query: 63 VFGKSPSEVREK----VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
+ G R K V Y+P+ PL+ D+ L G + + + +
Sbjct: 64 IIGMEMPRERVKIMRNVGYMPER-------PLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E++ + G+ +A ELS GQ+QRV+ A ALM +PELL+LDEP S LDP R+E
Sbjct: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDE 229
+ ++ + G T+ I++H V+ + + + V LI D +L+ G ++ + E
Sbjct: 177 GKILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIE 227
>pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealyticum
>gi|6899047|gb|AAF30499.1|AE002109_2 (AE002109) ABC
transporter [Ureaplasma urealyticum]
Length = 236
Score = 112 bits (278), Expect = 4e-24
Identities = 75/230 (32%), Positives = 126/230 (54%), Gaps = 14/230 (6%)
Query: 2 EYVIEAENLTIMYD-SVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
E+++E +NLT +Y S + V L+F +K+GE +G NG+GKTT ++ + +TNY+G
Sbjct: 4 EFILEVKNLTKIYKKSNQGVFDLSFNVKRGEIHAFIGENGSGKTTTIKSIINAYTNYKGS 63
Query: 61 ILVFG---KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
IL+ G K+P EK+ YVP+ + L ++ + LY + ++ I+
Sbjct: 64 ILIDGFDNKTPKS-HEKIGYVPE-------IALFPSELTTFQYLYSFARLSNLNKKQAIE 115
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
R L+ + ++ K S GQK++VI+ +AL+ +PEL++LDEP + LDP AR E
Sbjct: 116 RIHNFLEKFRISDLKNKKPINFSSGQKKKVILIQALLHDPELIILDEPTANLDPSARHEF 175
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVL 226
+ L ++ E T+ I +H + + D + LI + KLV G + L
Sbjct: 176 NNILKELHE-QNKTIFICSHILKEMDTYVDSLTLIHKGKLVYSGHKYDAL 224
>pir||S76632 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001739|dbj|BAA10576.1| (D64004) ABC transporter
[Synechocystis sp.]
Length = 245
Score = 112 bits (277), Expect = 5e-24
Identities = 70/226 (30%), Positives = 124/226 (53%), Gaps = 23/226 (10%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTF----KLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY 57
E V+ ENL+ Y + + + F +L +GE ++L GP+G+GKTTLL ++ GL +
Sbjct: 19 EPVVAMENLSHFYGTGNLRKQILFDINLRLDEGEVVILKGPSGSGKTTLLTLMGGLRSAQ 78
Query: 58 QGKILVFGKSPS--------EVREKVAYVPQTFSL--NFRVPLSVLDVVSMGGLYKKGLI 107
G + VFG+ + +VR + Y+ Q +L + +V + + Y
Sbjct: 79 SGSLRVFGQELNGAKKQDLVQVRRHIGYIFQAHNLLESLTARQNVQMAIELHPQYNA--- 135
Query: 108 HFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLS 167
Q+ + + +L+ +GL + LSGGQKQRV IARAL+S+P+++L DEP +
Sbjct: 136 -----QQAKELSIAMLEAVGLGAHINYNPHNLSGGQKQRVAIARALVSHPKMILADEPTA 190
Query: 168 ALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLID 213
ALD K+ + + K+ + G T++I THD N ++++ D+++ ++
Sbjct: 191 ALDSKSGHDVVELMRKLAREQGSTILIVTHD-NRILDVADRIIQLE 235
>pir||S74440 iron(III) dicitrate transport system permease protein fecE -
Synechocystis sp. (strain PCC 6803)
>gi|1651664|dbj|BAA16592.1| (D90899) iron(III) dicitrate
transport system permease protein FecE [Synechocystis
sp.]
Length = 268
Score = 112 bits (277), Expect = 5e-24
Identities = 75/244 (30%), Positives = 129/244 (52%), Gaps = 9/244 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ L++ YDS ++GL + +GE L+GPNG GK+TLLR +A L G + +
Sbjct: 10 LTTRKLSLAYDSHLIIQGLDLAINQGEITTLVGPNGCGKSTLLRGMARLLKPQGGTVYLE 69
Query: 65 GKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
G++ E+ +++ +PQ S L+V ++V+ G + + Q+ +K
Sbjct: 70 GEAIAHLPTKELAKRLGILPQ--SPPAPEGLTVRELVAQGRYPHQNWLQQWSKQDELKVE 127
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
E + L + A + LSGGQ+QR IA AL + E+LLLDEP + LD +IE
Sbjct: 128 -EAIATTDLHQFANRPLDSLSGGQRQRAWIAMALAQDTEILLLDEPTTYLDLAHQIEVLD 186
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDK-VMLIDRKLVAFGSPEEVLRDEIIGKVYGPA 238
L + + G T+++ HD+N + + L D KL+A G P+ ++ +E++ +V+G
Sbjct: 187 LLHWLNREAGRTIVMVLHDLNLACRYSHRLIALRDGKLLAQGRPQAIVTEELVRQVFGLE 246
Query: 239 SKAV 242
S+ +
Sbjct: 247 SRII 250
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 112 bits (277), Expect = 5e-24
Identities = 69/228 (30%), Positives = 124/228 (54%), Gaps = 13/228 (5%)
Query: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Y IE E LT Y KA++ L+F + +G LGPNGAGKTT + + G+ G +
Sbjct: 2 YAIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDVR 61
Query: 63 VFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
+ G K P + +E++ ++P+ ++ + + ++ Y+ QE KR
Sbjct: 62 ILGYDIFKEPLKAKERLGFLPENATI-YEELTAWRNLDFFASFYRMS------KQEKEKR 114
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E+L +GL ++ + + S G +QR+++A+AL+++PELL+LDEP S LDP+
Sbjct: 115 IEELLKLVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEG-ARLV 173
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEV 225
+ + + G T+ ++H ++ + E+ DKV +++ KL G+ EE+
Sbjct: 174 KDIIREQRKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
>emb|CAB69727.1| (AL137166) putative metal transport ABC transporter [Streptomyces
coelicolor A3(2)]
Length = 256
Score = 112 bits (277), Expect = 5e-24
Identities = 77/230 (33%), Positives = 127/230 (54%), Gaps = 10/230 (4%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E VI + S + G+ +++G+ + LLG NG+GK+T +R + G G+I
Sbjct: 4 ESVISLRGVRAELGSRPVLRGIDLTVRRGQVVALLGANGSGKSTAVRTIIGQVPVTAGEI 63
Query: 62 LVFGKSPSEVRE--KVAYVPQTFSLNFRVPLSVLDVVSMGGLYKK--GLIHFNIPQEVIK 117
+FG R+ +V YVPQ + VP +V +VVS G L + G++ E ++
Sbjct: 64 ELFGTPRRRFRDWARVGYVPQRTTAAGGVPATVTEVVSSGRLSRARFGVLR-KADHEAVR 122
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
R L ++ G+ + AK S LSGGQ QRV+IARAL + PELL++DEP++ +D ++
Sbjct: 123 RALGLV---GMADRAKDSVNALSGGQHQRVLIARALAAEPELLIMDEPMAGVDLASQEVL 179
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDK-VMLIDRKLVAFGSPEEVL 226
TL + + G T+++ H++ PL + D+ V+L D ++ G P E +
Sbjct: 180 AETL-RGQVAAGTTVLLVLHELGPLEPLIDRAVVLRDGCVLHDGPPPEAV 228
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 112 bits (277), Expect = 5e-24
Identities = 72/201 (35%), Positives = 114/201 (55%), Gaps = 15/201 (7%)
Query: 3 YVIEAENLTIMY-DSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
Y +E E L Y +A++G++ ++KKG+ LLGPNGAGK+T + +++ L GK+
Sbjct: 2 YALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKV 61
Query: 62 LVFGKSPSE----VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
VFG ++K+ VPQ F+ N P ++ + L + G ++ +P+ + K
Sbjct: 62 TVFGYDLDSQLELAKQKLGLVPQEFNFN---PFETVEQIV---LQQAG--YYGVPKALAK 113
Query: 118 -RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
R + L L L E + R LSGG K+R++IARALM P+LL+LDEP + +D + R
Sbjct: 114 ERAKKYLTQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRS 173
Query: 177 ATSTLSKIKEDMGITMIITTH 197
L +I G+T+I+TTH
Sbjct: 174 MWEFLKQINA-QGVTIILTTH 193
>emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coelicolor]
Length = 253
Score = 112 bits (277), Expect = 5e-24
Identities = 75/244 (30%), Positives = 130/244 (52%), Gaps = 21/244 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M +++AE + + +V+ ++G+ ++K+GE L+GP+G+GK+T LR + L G+
Sbjct: 1 MTAMVKAEGVHKSFGAVEVLKGIDLEVKQGEVFCLIGPSGSGKSTFLRCINHLEKINAGR 60
Query: 61 ILVFGK--------------SPSEVREKVAYVPQTFS-LNFRVPLSVLDVVSMGGLYKKG 105
+ V G+ SEV K + F N ++ ++ V + KG
Sbjct: 61 LYVDGELVGYRQKGDKLYELKDSEVALKRRDIGMVFQRFNLFPHMTAVENVMEAPVQVKG 120
Query: 106 LIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEP 165
+ + +R +L+ +GL + A +LSGGQ+QRV IARAL +P+L+L DEP
Sbjct: 121 MSR----AQARERARGLLERVGLADKAGNYPSQLSGGQQQRVAIARALAMDPKLMLFDEP 176
Query: 166 LSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVA-FGSPEE 224
SALDP+ + + + E G+TM++ TH++ E+GD ++ +D +V G+P +
Sbjct: 177 TSALDPELVGDVLDVMRDLAES-GMTMVVVTHEMGFAREVGDSLVFMDNGVVVESGNPRD 235
Query: 225 VLRD 228
VL D
Sbjct: 236 VLTD 239
>gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis]
Length = 347
Score = 112 bits (277), Expect = 5e-24
Identities = 78/243 (32%), Positives = 141/243 (57%), Gaps = 18/243 (7%)
Query: 1 MEYVIEAENLTIMYDS----VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTN 56
M+ ++E ++L + +D+ V+AV G+TF LKKGETL ++G +G+GK+ + L GL N
Sbjct: 1 MKTLLEVKDLQVSFDTHAGEVQAVRGVTFDLKKGETLAIVGESGSGKSVTSKALMGLIPN 60
Query: 57 YQGKI----LVF-GKSPSEVREKVAYVPQ--TFSLNFRVPLSVLD-VVSMGGLYKKGLI- 107
G+I +VF G+ +++ EK + ++ F+ P++ L+ +++G +GLI
Sbjct: 61 PPGRIKNGEIVFEGRDLTKLTEKEMQQVRGKDIAMIFQDPMTSLNPTMTIGNQIMEGLIK 120
Query: 108 HFNIPQ-EVIKRGLEILDFLGLK--EIAKKSF-RELSGGQKQRVIIARALMSNPELLLLD 163
H + + + K LE++D +G+ E K + + SGG +QRV+IA AL NP+LL+ D
Sbjct: 121 HQGMSKADARKVALELIDLVGIPNPEARLKQYPHQFSGGMRQRVVIAMALACNPKLLIAD 180
Query: 164 EPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSP 222
EP +ALD + + + I++ +I THD+ + + D+V ++ K+V G+
Sbjct: 181 EPTTALDVTIQAQILELMKDIQQKTEAAIIFITHDLGVVANVADRVAVMYAGKVVEIGTV 240
Query: 223 EEV 225
+E+
Sbjct: 241 DEI 243
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 111 bits (276), Expect = 6e-24
Identities = 71/226 (31%), Positives = 129/226 (56%), Gaps = 10/226 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ E+L Y +AV+ ++F + + E + LLGPNGAGKTT L++LAGL + G I +
Sbjct: 1 MLSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKL 60
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
G+ + R + Y+PQ + F ++ + ++ G GL +++ E+L
Sbjct: 61 LGEKKLD-RRLIGYLPQYPA--FYSWMTANEFLTFAGRLS-GLSKRKCQEKIG----EML 112
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+F+GL E A K SGG KQR+ +A+AL+ P+ L+LDEP+SALDP R E + +
Sbjct: 113 EFVGLHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMRE 172
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDE 229
+K+ M + + +TH ++ ++ D+V+++ +++ + L+ +
Sbjct: 173 LKKHMAV--LFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQ 216
>pir||F71849 amino acid ABC transporter, ATP-binding protein - Helicobacter
pylori (strain J99) >gi|4155696|gb|AAD06680.1|
(AE001537) AMINO ACID ABC TRANSPORTER, ATP-BINDING
PROTEIN [Helicobacter pylori J99]
Length = 248
Score = 111 bits (276), Expect = 6e-24
Identities = 72/225 (32%), Positives = 124/225 (55%), Gaps = 14/225 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M ++E + L Y + ++G+ F L KGE ++LGP+G GK+T L+ L GL +G+
Sbjct: 1 MSAILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKIDEGE 60
Query: 61 ILVFG---KSPS----EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ 113
IL +PS ++R+K+ V Q + L L+VLD + + L +
Sbjct: 61 ILFENTNLNTPSTNWNQMRQKIGMVFQNYELFPH--LNVLDNILLAPLK----VQKRSKD 114
Query: 114 EVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKA 173
EV+ + +E+L +GL+ + +ELSGGQKQRV I R+L P+++L DE ++LDP+
Sbjct: 115 EVLSQAVELLKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEM 174
Query: 174 RIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVA 218
E + ++ + G++M+I TH++ +I K++ D +A
Sbjct: 175 VKEVLEVILELAK-TGMSMVIVTHEMKFAQKIASKIVFFDSGKIA 218
>pir||T36000 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5459395|emb|CAB50753.1| (AL096839)
putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 307
Score = 111 bits (276), Expect = 6e-24
Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 23/233 (9%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E V++ + L Y + AV GL + G T +L GPNGAGKTT + G G +
Sbjct: 4 EPVVQVQALVKRYGTKTAVNGLDLVARTGVTAVL-GPNGAGKTTTVETCEGYRRPDSGTV 62
Query: 62 LVFGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE 121
V G P V Q L R+ + ++ GG+Y G + + V K
Sbjct: 63 RVLGLDP---------VRQGAELRPRIGV----MLQSGGVYS-GARADEMLRHVAKLHAH 108
Query: 122 ILDF------LGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
LD LGL + ++R LSGGQ+QR+ +A A++ PEL+ LDEP + LDP+AR
Sbjct: 109 PLDVDALIERLGLDSCGRTTYRRLSGGQQQRLALAMAVVGRPELVFLDEPTAGLDPQAR- 167
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR 227
AT L + G+++I+TTH ++ ++ D V +ID ++VA GSPEE+ R
Sbjct: 168 RATWDLVRDLRGDGVSVILTTHHMDEAEQLADDVAIIDTGRVVAQGSPEELCR 220
>pir||T35757 probable branched chain amino acid transport ATP-binding protein -
Streptomyces coelicolor >gi|5689905|emb|CAB52068.1|
(AL109732) putative branched chain amino acid transport
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 238
Score = 111 bits (276), Expect = 6e-24
Identities = 75/242 (30%), Positives = 133/242 (53%), Gaps = 15/242 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M ++E E+L + Y ++AV+G++FK+ GE + L+G NGAGKTT LR L+GL G+
Sbjct: 1 MTALLEVEDLRVAYGKIEAVKGISFKVDAGEVVTLIGTNGAGKTTTLRTLSGLLKPVGGQ 60
Query: 61 ILVFGKSPSEVREK------VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE 114
I GKS +V +A+ P+ + R +++ D + +G + ++
Sbjct: 61 IRFGGKSLKKVPAHQIVSLGLAHSPEGRHIFPR--MTIEDNLRLGAFLRSDRPGI---EK 115
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
I+R ++ LG E K++ LSGG++Q + + RALMS P+LL+LDEP L P
Sbjct: 116 DIQRAYDLFPILG--ERRKQAAGTLSGGEQQMLAMGRALMSQPKLLMLDEPSMGLSPIMM 173
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEVLRDEIIGK 233
+ +T++++K G T+++ + + + D +++ +V GS +++L DE + K
Sbjct: 174 QKIMATIAELK-SQGTTILLVEQNAQAALSLADHGHVMEVGNIVLSGSGQDLLHDESVRK 232
Query: 234 VY 235
Y
Sbjct: 233 AY 234
>gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter ATP-binding protein
[Zymomonas mobilis]
Length = 261
Score = 111 bits (276), Expect = 6e-24
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 14/240 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++A NL ++ ++ +GE LLG NGAGK+TLLR+L GL +G I +
Sbjct: 14 LLQARNLRYRRQKTVILDDISLSFHQGELTALLGINGAGKSTLLRLLLGLMPPDEGNIFL 73
Query: 64 FGKSPSEVREK-----VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHF--NIPQEVI 116
K + K +AYVPQ F P +V +VVS+G L I F N+
Sbjct: 74 QNKPLKAISRKTIARHIAYVPQEHKAIF--PYTVEEVVSLGRL---PYIAFGQNLSLSDK 128
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
+ + LD+L + ++ + + ELSGG++Q V++ARAL +L+LDEP + LD ++
Sbjct: 129 QAVRQALDYLNIASLSARPYTELSGGERQSVLLARALAQGAPILVLDEPETGLDFGQQLR 188
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVY 235
L K+ D G ++ TTHD +I + +L+ + +++A G+P+ VL I +Y
Sbjct: 189 LAVLLQKL-ADEGYCIVATTHDPLRARQIFSRAILLQQGRIIADGAPKSVLTRSAIEALY 247
>pir||B45917 nucleotide-binding protein proV - Salmonella typhimurium (fragment)
>gi|552022|gb|AAA88621.1| (M26063) proV gene product
[Salmonella typhimurium]
Length = 290
Score = 111 bits (275), Expect = 8e-24
Identities = 78/238 (32%), Positives = 139/238 (57%), Gaps = 25/238 (10%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E ++E L++ V+ + +++GE +++G +G+GK+T++R+L L +G++
Sbjct: 32 EQILEKTGLSL------GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQV 85
Query: 62 LVFGK-----SPSEVRE----KVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNI 111
L+ G S +E+RE K+A V Q+F+L +P ++VLD + G + G+
Sbjct: 86 LIDGVDIAKISDAELREVRRKKIAMVFQSFAL---MPHMTVLDNTAFG-MELAGIA---- 137
Query: 112 PQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDP 171
QE ++ L+ L +GL+ A ELSGG +QRV +ARAL NP++LL+DE SALDP
Sbjct: 138 AQERREKALDALRQVGLENYAHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDP 197
Query: 172 KARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
R E L K++ T++ +HD++ + IGD++ ++ ++V G+P+E+L +
Sbjct: 198 LIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 111 bits (275), Expect = 8e-24
Identities = 73/231 (31%), Positives = 124/231 (53%), Gaps = 23/231 (9%)
Query: 18 KAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS-----PSEVR 72
KAV + + KGE + +GP+G GKTT ++++ L G+I + G++ P E+R
Sbjct: 16 KAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIFIDGENIMEQDPVELR 75
Query: 73 EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK-RGLEILDFLGL-KE 130
K+ YV Q L +++ +S+ K P+E K R E+L + + E
Sbjct: 76 RKIGYVIQQIGLFPH--MTIQQNISLVPKLLKW------PEEKRKERARELLKLVDMGPE 127
Query: 131 IAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGI 190
+ ELSGGQ+QR+ + RAL + P L+L+DEP ALDP R K++ +
Sbjct: 128 YLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKLQRTLNK 187
Query: 191 TMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR-------DEIIGK 233
T++ THD++ I++ D+++++ ++V G+P+E+LR +E IGK
Sbjct: 188 TIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIGK 238
>pir||G81923 probable ABC-transporter ATP-binding protein NMA0791 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379511|emb|CAB84074.1| (AL162754) putative
ABC-transporter ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 251
Score = 111 bits (275), Expect = 8e-24
Identities = 73/229 (31%), Positives = 116/229 (49%), Gaps = 6/229 (2%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I ENLT+ Y AV + ++ + GPNGAGK+T L+ L GL G I +
Sbjct: 13 IIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTFLKSLMGLQPIDTGSIRLD 72
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILD 124
G + R+ +AY+PQ ++ P++V D+ +MG Y+ G I +R E L+
Sbjct: 73 GLT----RQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR-GINAVKKQRVHESLE 127
Query: 125 FLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKI 184
+G+++ A + LS GQ QRV+ AR L+ N + LLLDEP +A+D + E L K
Sbjct: 128 RVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFNAVDARTTYELLDVLQKC 187
Query: 185 KEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGK 233
G +I HD + +L+ R+ +A G+ E +L + + +
Sbjct: 188 -HCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETILTEPYLAQ 235
>emb|CAC14366.1| (AL445963) Fe uptake system permease [Streptomyces coelicolor]
Length = 272
Score = 111 bits (275), Expect = 8e-24
Identities = 74/241 (30%), Positives = 133/241 (54%), Gaps = 17/241 (7%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
+ +T+ + + VE ++ + GE + L+GPNG+GK++LLR + + G++ V G
Sbjct: 9 DGVTLTAGAHRLVEDVSLTARPGEVIGLVGPNGSGKSSLLRAVYRILRPTTGQVSVDGTD 68
Query: 68 P-----SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE--VIKRGL 120
++ VA V Q F L+V +VV+MG K L+ + ++ +I+ L
Sbjct: 69 AWSLPVRQLARTVAAVVQESGAEFE--LTVREVVAMGRTPHKRLLDGDTAEDAGLIRSAL 126
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
+D ++A + F +LSGG++QRV+IARAL P LL+LDEP + LD + +++
Sbjct: 127 TAVD---ATDLAHRPFDQLSGGERQRVLIARALAQQPSLLVLDEPTNHLDIRHQLDVLGA 183
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLRDEIIGKVYGPAS 239
L ++ T+++ HD+N D++ +L D K+ A G P ++L +++ +VYG S
Sbjct: 184 LRRLP----ATVLVALHDLNLAAYYCDRLYVLCDGKVTAAGPPADILTSQLLSEVYGVTS 239
Query: 240 K 240
+
Sbjct: 240 E 240
>gb|AAB01532.1| (U38418) ProV [Bacillus subtilis]
Length = 404
Score = 111 bits (274), Expect = 1e-23
Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 21/230 (9%)
Query: 18 KAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS-----PSEVR 72
KAV + K+ KGE + +GP+G GKTT ++++ L GKI + G++ P E+R
Sbjct: 17 KAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIFIDGENIMEQDPEELR 76
Query: 73 EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGL-KEI 131
K+ YV Q L + + ++ + L K H +R E+L + + E
Sbjct: 77 RKIGYVFQQIGLFPHMTIQQ-NISLVPKLLKWPEQHRK------ERARELLKLVDMGPEY 129
Query: 132 AKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGIT 191
+ ELSGGQ+QR+ + RAL P L+L+DEP ALDP R K+++ + T
Sbjct: 130 LDRYPHELSGGQQQRIGVLRALAREPPLILMDEPFGALDPITRDSLQEEFKKLQKTLHKT 189
Query: 192 MIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLR-------DEIIGK 233
++ THD++ I++ D+++++ ++V G+P+++LR +E IGK
Sbjct: 190 IVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIGK 239
>gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stutzeri]
Length = 341
Score = 111 bits (274), Expect = 1e-23
Identities = 75/251 (29%), Positives = 130/251 (50%), Gaps = 14/251 (5%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
+ ++ +N+ Y + +E + F+++ G + LLG +GAGK+TL R L GL G I
Sbjct: 3 DVALQLKNVGKSYGNKVVLESIDFEVRHGSMVALLGTSGAGKSTLFRCLTGLEPIDSGSI 62
Query: 62 LVFGKSPSE--------VREKVAYVPQTFSL--NFRVPLSVLDV-VSMGGLYKKGLIHFN 110
+ G+S E VR ++ +V Q L F +VL ++ +++ L F+
Sbjct: 63 VALGESIHELSPARLRAVRGQIGFVFQQLHLVKRFSALENVLGARLAEMPIWRVTLKSFS 122
Query: 111 IPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALD 170
+V+ E LD +G+ + A + LSGGQ+QR+ IARAL P++++ DEP+S+LD
Sbjct: 123 RADKVL--AFECLDRVGMLDYANTPTQLLSGGQQQRIAIARALAQKPKIIIADEPVSSLD 180
Query: 171 PKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVM-LIDRKLVAFGSPEEVLRDE 229
P TL D+ + ++ + H V+ E GD+++ + D ++V G+P E +
Sbjct: 181 PLTARSVLQTLKAAATDLNVAVLCSLHQVDLAREFGDRIVGMRDGRVVFDGTPAEFTDER 240
Query: 230 IIGKVYGPASK 240
+ PA K
Sbjct: 241 VHALYQVPAGK 251
>gi|10957420 iron ABC transporter, ATP-binding protein [Deinococcus radiodurans]
>gi|7473070|pir||D75631 iron ABC transporter,
ATP-binding protein - Deinococcus radiodurans (strain
R1) >gi|6460849|gb|AAF12553.1|AE001826_22 (AE001826)
iron ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 269
Score = 111 bits (274), Expect = 1e-23
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 11/239 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ ++L + Y V + + G+ ++GPNG GK+TLLR LA L G I ++
Sbjct: 7 LSTDHLRLGYGQSVIVSDMNLSIAGGKVTSIIGPNGCGKSTLLRALARLLPAQNGHIELY 66
Query: 65 GKS----PSE-VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
G++ PS + +K+A +PQ S LSV ++V G +G F + +E +
Sbjct: 67 GQALHTLPSRAIAQKLAILPQGPSAP--EGLSVEELVWFGRHPHQG--RFPVQREEDRAA 122
Query: 120 LE-ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
+ LD G++ A + LSGGQ+QR IA +L ++LLLDEP + LDP ++E
Sbjct: 123 VAWALDQTGMRVFAGRPLDSLSGGQRQRAWIAMSLAQQTDILLLDEPTTYLDPSHQLEVL 182
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVM-LIDRKLVAFGSPEEVLRDEIIGKVYG 236
++ D G T+++ HD+N + D+++ L ++ A G +EVL E++ V+G
Sbjct: 183 QLAGRLNRDQGKTVVMVLHDLNQAVRYSDEIIALKGGEVYAQGPADEVLTHELLADVFG 241
>pir||F81257 probable hemein uptake system ATP-binding protein Cj1616 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6969033|emb|CAB73604.1| (AL139079) putative haemin
uptake system ATP-binding protein [Campylobacter jejuni]
Length = 258
Score = 111 bits (274), Expect = 1e-23
Identities = 72/238 (30%), Positives = 125/238 (52%), Gaps = 8/238 (3%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+++ NL+ Y ++ + +LK + +LGPNG+GK+TLL+++ + +G I +
Sbjct: 1 MLKIHNLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLLKLILKNLSPNKGVISL 60
Query: 64 FGK-----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
F S E + +VPQ LN PL V+DV+ M + +E I
Sbjct: 61 FNTNIKDFSLKEFAKICGFVPQKSELN--TPLKVIDVLLMSKYPNLKHAFSSYSKEDILE 118
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E L L+ ++S LSGG+ QR+++ARAL+ P++L LDEP SALD IE
Sbjct: 119 IKEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKILFLDEPTSALDLNYAIELL 178
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVY 235
+ K+ ++ I ++ HD+N DK++ + + ++ FG+ +E+ EI+ ++Y
Sbjct: 179 NLCEKLVKEKNIAVVAILHDLNLASIFCDKILFLKEGEIKYFGTSKELFTQEILKEIY 236
>pir||A81180 ABC transporter, ATP-binding protein NMB0588 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225818|gb|AAF41016.1| (AE002415) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 251
Score = 111 bits (274), Expect = 1e-23
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 8/230 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I ENLT+ Y AV + ++ + GPNGAGK+T L+ L GL G I +
Sbjct: 13 IIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTFLKSLMGLQPIDTGSIRLD 72
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH-FNIPQEVIKRGLEIL 123
G + R+ +AY+PQ ++ P++V D+ +MG Y+ G N Q+ +R E L
Sbjct: 73 GLT----RQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFKGINTAQK--QRVHEAL 126
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ +G++ A + LS GQ QRV+ AR L+ N + LLLDEP +A+D + E L K
Sbjct: 127 ERVGMQRFADRQIAYLSNGQFQRVLFARMLVQNAKFLLLDEPFNAVDARTTYELLDVLQK 186
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGK 233
G +I HD + +L+ R+ +A G+ E +L + + +
Sbjct: 187 C-HCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETILTEPYLAQ 235
>gb|AAD33527.2|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]
>gi|9755013|gb|AAF98153.1|AF251216_1 (AF251216) FhuC
[Staphylococcus aureus]
Length = 265
Score = 111 bits (274), Expect = 1e-23
Identities = 71/239 (29%), Positives = 128/239 (52%), Gaps = 13/239 (5%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ + + I Y + L ++ G+ ++GPNG GK+TLL+ L+ L +G++ +
Sbjct: 4 LHGQQVKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKSTLLKALSRLLAVKEGEVFLD 63
Query: 65 GK-----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-YKKGLIHFNIPQEVIKR 118
G+ S E+ +K+A +PQ S L+V ++VS G ++KG K+
Sbjct: 64 GENIHTQSTKEIAKKIAILPQ--SPEVADGLTVGELVSYGRFPHQKGFGRLTAED---KK 118
Query: 119 GLE-ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
++ ++ G +S +LSGGQ+QRV IA AL +++ LDEP + LD ++E
Sbjct: 119 EIDWAMEVTGTDTFRHRSINDLSGGQRQRVWIAMALAQRTDIIFLDEPTTYLDICHQLEI 178
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKVY 235
+ K+ ++ G T+++ HD+N I D ++ + + ++A GS E+VL EI+ KV+
Sbjct: 179 LELVQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKEGDIIATGSTEDVLTQEILEKVF 237
>sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72467|pir||BVECPV glycine betaine/L-proline
transport ATP-binding protein proV - Escherichia coli
>gi|147373|gb|AAA24427.1| (M24856) proV peptide
[Escherichia coli] >gi|1789032|gb|AAC75724.1| (AE000352)
ATP-binding component of transport system for glycine,
betaine and proline [Escherichia coli K12]
>gi|1800065|dbj|BAA16542.1| (D90891) GLYCINE
BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV.
[Escherichia coli]
Length = 400
Score = 110 bits (273), Expect = 1e-23
Identities = 78/238 (32%), Positives = 138/238 (57%), Gaps = 25/238 (10%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E ++E L++ V+ + +++GE +++G +G+GK+T++R+L L +G++
Sbjct: 32 EQILEKTGLSL------GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQV 85
Query: 62 LVFGK-----SPSEVRE----KVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNI 111
L+ G S +E+RE K+A V Q+F+L +P ++VLD + G L N
Sbjct: 86 LIDGVDIAKISDAELREVRRKKIAMVFQSFAL---MPHMTVLDNTAFG----MELAGINA 138
Query: 112 PQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDP 171
+E ++ L+ L +GL+ A ELSGG +QRV +ARAL NP++LL+DE SALDP
Sbjct: 139 -EERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDP 197
Query: 172 KARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
R E L K++ T++ +HD++ + IGD++ ++ ++V G+P+E+L +
Sbjct: 198 LIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255
>sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|1001916|emb|CAA60881.1|
(X87578) nodI [Rhizobium galegae]
Length = 347
Score = 110 bits (273), Expect = 1e-23
Identities = 80/243 (32%), Positives = 135/243 (54%), Gaps = 22/243 (9%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I+ + +T++Y V+ L+F ++ GE LLGPNGAGK+T+ R+L G+ T GKI V
Sbjct: 49 IDLQAVTMIYRDKTVVDSLSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPSAGKISVL 108
Query: 65 G-KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE-- 121
G P + R A + +S D + M ++ L+ F ++ R +E
Sbjct: 109 GLPVPGKARLARASIG---------VVSQFDNLDMEFTVRENLLVFGRYFQMSTRAIEKL 159
Query: 122 ---ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
+L+F L+ A +LSGG K+R+ +ARAL+++P+LL+LDEP + LDP AR +
Sbjct: 160 IPSLLEFAQLEAKADVRVSDLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIW 219
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLID-RKLVAFGSPEEVLRDEIIG----K 233
L + G T+++TTH ++ + D++ +++ +++A G P ++ D IIG +
Sbjct: 220 ERLRSLL-IRGKTILLTTHMMDEAERMCDRLCVLEGGRMIAEGPPLSLIED-IIGCPVIE 277
Query: 234 VYG 236
VYG
Sbjct: 278 VYG 280
>sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING PROTEIN AAPP
>gi|1154897|emb|CAA57936.1| (X82596) general amino acid
ABC type transporter [Rhizobium leguminosarum]
Length = 257
Score = 110 bits (273), Expect = 1e-23
Identities = 69/221 (31%), Positives = 124/221 (55%), Gaps = 16/221 (7%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E +E N+ Y + + K+ +GE +++ GP+G+GK+T++R + L + +GKI
Sbjct: 15 EVAVEIVNMNKWYGDFHVLRDINLKVMRGERIVIAGPSGSGKSTMIRCINRLEEHQKGKI 74
Query: 62 LVFG-------KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE 114
+V G K EVR +V V Q F N L++L+ ++ ++ + +P++
Sbjct: 75 VVDGTELTNDLKKIDEVRREVGMVFQHF--NLFPHLTILENCTLAPIWVR-----KMPKK 127
Query: 115 VIKR-GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKA 173
+ + L + + E A K +LSGGQ+QRV IAR+L NP+++L DEP SALDP+
Sbjct: 128 QAEEVAMHFLKRVKIPEQANKYPGQLSGGQQQRVAIARSLCMNPKIMLFDEPTSALDPEM 187
Query: 174 RIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR 214
E T+ + E+ G+TM+ TH++ ++ ++V+ +D+
Sbjct: 188 IKEVLDTMVGLAEE-GMTMLCVTHEMGFARQVANRVIFMDQ 227
>pir||C64666 glutamine transport protein glnQ - Helicobacter pylori (strain
26695) >gi|2314330|gb|AAD08217.1| (AE000623) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Helicobacter pylori 26695]
Length = 248
Score = 110 bits (273), Expect = 1e-23
Identities = 70/225 (31%), Positives = 122/225 (54%), Gaps = 14/225 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M ++E + L Y + ++G+ F L KGE ++LGP+G GK+T L+ L GL +G+
Sbjct: 1 MSVILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKINEGE 60
Query: 61 ILVFGKSPS-------EVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ 113
IL + + ++R+K+ V Q + L L+VLD + + + +
Sbjct: 61 ILFENTNLNNKATNWNQMRQKIGMVFQNYELFPH--LNVLDNILLAPMK----VQKRSKD 114
Query: 114 EVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKA 173
EVI + +E+L +GL+ + +ELSGGQKQRV I R+L P+++L DE ++LDP+
Sbjct: 115 EVISQAIELLKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEM 174
Query: 174 RIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVA 218
E + ++ G++M+I TH++ +I K++ D +A
Sbjct: 175 VKEVLEVILEL-ATTGMSMVIVTHEMKFAQKIAHKIVFFDSGKIA 218
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 110 bits (273), Expect = 1e-23
Identities = 72/218 (33%), Positives = 117/218 (53%), Gaps = 18/218 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M +I+ +LT MY S K+V+ L +K+G+ LG NGAGKTT +R+L GL G+
Sbjct: 1 MSTIIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQ 60
Query: 61 ILVFG----KSPSEVREKVAYVPQT--FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQE 114
I +FG K+ E+ ++ + + F N ++L + G++KK I
Sbjct: 61 IEIFGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNAID------ 114
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
E+L+ +GL+ KK + S G KQR+ IARAL+ PEL +LDEP + LDP
Sbjct: 115 ------EVLEIVGLQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGI 168
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI 212
E + + ++ IT+ I++H ++ + ++ D V +I
Sbjct: 169 KEMRRLIHSLAKERNITIFISSHILSEIEQLVDHVGII 206
>emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lactis]
Length = 368
Score = 110 bits (273), Expect = 1e-23
Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 33/262 (12%)
Query: 1 MEYVIEAENLTIMYDS----VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTN 56
M +IE NL++ + V AV+ T ++KG+ ++G +GAGK+TL+R + L
Sbjct: 1 MTAIIELNNLSVQFHQKGRLVTAVKNATLHIEKGDIYGVIGYSGAGKSTLVRTINLLQKP 60
Query: 57 YQGKILVFGKSP--------------SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLY 102
+G+I++ G+ E R+K+ + Q F N +V + V+ +
Sbjct: 61 TEGQIVINGEKIFDSENPVKFTGAKLREFRQKIGMIFQHF--NLLSEKTVFNNVAFALQH 118
Query: 103 -----KKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNP 157
K G + +E + E+L + L +++ K +LSGGQKQRV IARAL ++P
Sbjct: 119 SQIEDKNGKKRYLTKKEKNDKVTELLKLVDLADLSDKYPAQLSGGQKQRVAIARALANDP 178
Query: 158 ELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV 217
E+L+ DE SALDPK + L + E +GIT+++ TH++ + EI +KV ++ +
Sbjct: 179 EILISDEGTSALDPKTTNQILDLLKSLHEKLGITVVLITHEMQVVKEIANKVAVMQNGEI 238
Query: 218 --------AFGSPEEVLRDEII 231
F P+E L + I
Sbjct: 239 IEQNSLIDIFAQPKEALTKQFI 260
>pir||B83225 ATP-binding component of ABC phosphonate transporter PA3384
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9949519|gb|AAG06772.1|AE004759_19 (AE004759)
ATP-binding component of ABC phosphonate transporter
[Pseudomonas aeruginosa]
Length = 278
Score = 110 bits (273), Expect = 1e-23
Identities = 80/254 (31%), Positives = 133/254 (51%), Gaps = 22/254 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGL---HTNY 57
M VI ++L + +A+ L +++ GE + L+G +G+GK+TLLR +AGL +
Sbjct: 1 MSAVIRVDSLNKTFARKQALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDN 60
Query: 58 QGKILVFGK----------SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-----Y 102
G I V G+ +R + Y+ Q F+L R LSVLD V +G L +
Sbjct: 61 GGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNR--LSVLDNVLLGFLGRMPRW 118
Query: 103 KKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLL 162
+ L F+ Q+ ++ LE L +GL + A + LSGGQ+QRV IARAL E++L
Sbjct: 119 RGSLGLFSAEQK--RQALEALARVGLADFAGQRASTLSGGQQQRVAIARALTQKAEVILA 176
Query: 163 DEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSP 222
DEP+++LDP++ + L+ I G T+++T H V+ + + + + + F
Sbjct: 177 DEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGS 236
Query: 223 EEVLRDEIIGKVYG 236
E L + + ++YG
Sbjct: 237 SEYLSEGFLNELYG 250
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 110 bits (272), Expect = 2e-23
Identities = 72/233 (30%), Positives = 124/233 (52%), Gaps = 18/233 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++E NL Y S +AV+G++F +++GE L L+G NGAGK+T L++LAGL G++
Sbjct: 1 MLEVRNLFKRYGSFEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGLIRPDGGEVRY 60
Query: 64 FGKS-PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI 122
FGK E++ + Y+P+ +L + +S + N+ ++ +I
Sbjct: 61 FGKDFDEEMKRIIGYLPEIDALYDNMTVSE---------------YLNLFADIYDVRADI 105
Query: 123 LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLS 182
L + K +LS G +++V IAR L+ +PE+L+ DEP LDP + L
Sbjct: 106 DGLLERLNLPDKYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAELLR 165
Query: 183 KIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDEIIGKV 234
++ E G ++ + H++ + I DKV+++ K + FGS EE++ I KV
Sbjct: 166 ELAE-RGKIIVFSAHNMYYVERIADKVVVMKGGKALYFGSLEELIGQNTIYKV 217
>pir||F72421 iron(III) ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980566|gb|AAD35172.1|AE001694_8 (AE001694)
iron(III) ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 256
Score = 110 bits (272), Expect = 2e-23
Identities = 67/238 (28%), Positives = 134/238 (56%), Gaps = 10/238 (4%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ ENL Y +++ + +KKGE ++GPNG+GKTTLL++L G+ +G + +
Sbjct: 3 IVRIENLFFQYRGGFSLKNINLSVKKGEFFGIIGPNGSGKTTLLKILVGIFRPQKGTVQL 62
Query: 64 FGKSPSEV-REKVAYVPQTFSLNF--RVPLSVLDVVSMGGLYKKGLIH--FNIPQEVIKR 118
G+ P E R+++A + S +F SV ++V MG L L+ +E++ +
Sbjct: 63 LGRIPWETSRKEMAKIVTLVSQDFFPSYDFSVKEIVEMGRLPHLSLLSGTSRKDEEIVLK 122
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
LE+ G + ++F LS G++++V++++A++ + E+LL+DE + LD
Sbjct: 123 SLEL---TGTLKFVDRNFWTLSSGERRKVVLSKAIVQDTEILLIDELTAHLDYNNVSLVG 179
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKV-MLIDRKLVAFGSPEEVLRDEIIGKVY 235
+ L ++KE G T+I HD+N + D++ ++ + +++ G+P EV+ +E++ +
Sbjct: 180 NVLKRLKES-GKTIISVFHDINVASALCDRIGVMKNGEMIKTGAPPEVVTEEVLRNTF 236
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 110 bits (272), Expect = 2e-23
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 27/245 (11%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
V+ ENL + V G+ + +GE + LLGPNGAGKTT+ ++ G+ GKI+
Sbjct: 3 VLRCENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKIIF 62
Query: 64 ----FGKSPSEVREK--VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLI------HFNI 111
K P R + + Y+ Q S+ GGL + I H
Sbjct: 63 RDVDITKFPVYRRARLGITYLQQETSI-------------FGGLTVRENIDLVLRFHEKD 109
Query: 112 PQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDP 171
++ ++ E+L LK + + LSGG+K+++ +AR + NP +LLDEP S +DP
Sbjct: 110 KEKRERKIEELLHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDP 169
Query: 172 KARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEI 230
K E ++K+ ++IT H+V+ L+EI D++ +I + +++A GSPE +L DE
Sbjct: 170 KTVKEIQKMTLELKQ-KNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILEDET 228
Query: 231 IGKVY 235
+ +VY
Sbjct: 229 VREVY 233
>pir||E72605 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE1308 - Aeropyrum pernix (strain
K1) >gi|5104985|dbj|BAA80299.1| (AP000061) 250aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 250
Score = 110 bits (272), Expect = 2e-23
Identities = 68/243 (27%), Positives = 135/243 (54%), Gaps = 15/243 (6%)
Query: 8 ENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKS 67
EN+T+ + V A++ ++ ++++GE L ++GPNGAGKT+LL V+ G++ +G++ G+
Sbjct: 5 ENITLRFGGVTALDNVSVEVRRGEILGIIGPNGAGKTSLLNVITGVYKPQRGRVYFKGRD 64
Query: 68 PSEVR--EKVAY-VPQTFSLNFRV-PLSVLDVVSM-------GGLYKKGLIHFNIPQ--- 113
+ ++ +++ + +TF + ++VL+ + + G + +K L F +
Sbjct: 65 ITGLKPHQRITLGLSRTFQHSELFHSMTVLENIMVRLHPWTRGSILEKALWAFRAKRWEV 124
Query: 114 EVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKA 173
E +R ++D L L E L G +++V +A AL NPE++L+DEP++ L +
Sbjct: 125 EARERAEHVIDLLDLHEHRHSPIGALPPGIQKKVDLAGALAQNPEVVLMDEPMAGLSKEE 184
Query: 174 RIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAF-GSPEEVLRDEIIG 232
+ + + + E M TM++ HD+ + ++ D+V+++D V F G P E + DE +
Sbjct: 185 KEDIVRAIIETSETMHTTMVLIEHDMEVVTDVCDRVVVMDYGKVIFEGPPHEAVADERVR 244
Query: 233 KVY 235
K Y
Sbjct: 245 KAY 247
>pir||JN0849 hypothetical 35K protein - Streptomyces lividans
>gi|47168|emb|CAA46525.1| (X65556) open reading frame
[Streptomyces lividans] >gi|5918477|emb|CAB56355.1|
(AL118514) ABC transport protein, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 326
Score = 109 bits (271), Expect = 2e-23
Identities = 73/230 (31%), Positives = 123/230 (52%), Gaps = 19/230 (8%)
Query: 2 EYVIEAENLTIMYDS-VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
E+VIE +L +Y +AV G+ F +++GE LLG NGAGKT+ + +L GL G+
Sbjct: 7 EHVIEVTDLRRVYGGGFEAVRGIDFSVRRGEVFALLGTNGAGKTSTVELLEGLAAPAGGR 66
Query: 61 ILVFGKSPSEVREKVAYVPQTFSL----NFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVI 116
+ V G P E+ A P+T + F L+V + M G
Sbjct: 67 VRVLGHDP--YTERAAVRPRTGVMLQEGGFPSELTVAETARMWAGCVSGA---------- 114
Query: 117 KRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIE 176
+ E+L +GL+ + ++LSGGQ++R+ +A AL+ +PE+L LDEP + LD + R +
Sbjct: 115 RPPAEVLALVGLEAKSGTRVKQLSGGQRRRLDLALALLGDPEVLFLDEPSTGLDAEGRRD 174
Query: 177 ATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEV 225
+ ++ D G T+++TTH + + D++ ++ D ++ A G+P EV
Sbjct: 175 TWELVGALR-DQGTTVLLTTHYLEEAEHLADRLAIMHDGRIAATGTPAEV 223
>pir||D35718 phnC protein - Escherichia coli >gi|147196|gb|AAA24339.1| (J05260)
HisP-like nucleotide binding protein (phnC) [Escherichia
coli]
Length = 262
Score = 109 bits (271), Expect = 2e-23
Identities = 78/253 (30%), Positives = 135/253 (52%), Gaps = 22/253 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGL------- 53
M+ +I E L ++ +A+ + + GE + LLGP+G+GK+TLLR L+GL
Sbjct: 1 MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSA 60
Query: 54 --HTNYQGKILVF-GKSPSEVREKVA---YVPQTFSLNFRVPLSVLDVVSMGGL-----Y 102
H G+ + G+ ++R+ A Y+ Q F+L R LSVL+ V +G L +
Sbjct: 61 GSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNR--LSVLENVLIGALGSTPFW 118
Query: 103 KKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLL 162
+ F Q+ +R L+ L +G+ A + LSGGQ+QRV IARALM +++L
Sbjct: 119 RTCFSWFTREQK--QRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILA 176
Query: 163 DEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSP 222
DEP+++LDP++ TL I ++ GIT+++T H V+ + ++++ + + V +
Sbjct: 177 DEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGS 236
Query: 223 EEVLRDEIIGKVY 235
+ +E +Y
Sbjct: 237 SQQFDNERFDHLY 249
>sp|P44692|ZNUC_HAEIN HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDING PROTEIN ZNUC
>gi|1074963|pir||B64066 probable ABC transport system
ATP-binding protein HI0408 - Haemophilus influenzae
(strain Rd KW20) >gi|1573381|gb|AAC22067.1| (U32724) ABC
transporter, ATP-binding protein (yebM) [Haemophilus
influenzae Rd]
Length = 268
Score = 109 bits (271), Expect = 2e-23
Identities = 61/233 (26%), Positives = 129/233 (55%), Gaps = 18/233 (7%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I+ +N+ +++ A++ + + + ++GPNG GK+TLL+ L L T G++ +
Sbjct: 15 LIQLKNINVVFAQKTALQDINLNIYPNSIITIVGPNGGGKSTLLKTLLKLQTPTSGEV-I 73
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEIL 123
+ K+ ++ YVPQ L+ +P++V +S+ KKG I + I LE L
Sbjct: 74 YSKNV-----RIGYVPQKIHLDHSLPITVERFLSL----KKG-----IKTQEISTALEQL 119
Query: 124 DFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSK 183
+ + K + ++LSGG+ QRV++ARA+++ P LL+LDEP +D + E + +
Sbjct: 120 S---ISHLRKNNMQKLSGGEMQRVLLARAILNKPNLLVLDEPTQGVDITGQAELYQLIHQ 176
Query: 184 IKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
++ + +++ +HD++ ++ +V+ I++ + G+P+ + D +++G
Sbjct: 177 TQQKLNCAVLMVSHDLHIVMADSKEVLCINQHICCAGTPDVLSNDPTFMRLWG 229
>pir||C82485 iron(III) ABC transporter, ATP-binding protein VCA0230 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657625|gb|AAF96142.1| (AE004363) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 254
Score = 109 bits (271), Expect = 2e-23
Identities = 72/253 (28%), Positives = 137/253 (53%), Gaps = 14/253 (5%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I+ E LT + + + V + + KG+ ++GPNGAGK+TLL + + L GK+ +
Sbjct: 1 MIQLEKLTKHFGTKRVVHDASAQFDKGQVTAIIGPNGAGKSTLLSMASRLVNRDAGKVWI 60
Query: 64 FGKSPSE-----VREKVAYVPQTFSLNFRVPLSVLDVVSMGGL-YKKGLIHFNIPQEVIK 117
+ E + +K+A + Q+ LN R +V ++ + G Y +G + +++I
Sbjct: 61 EQRELVEWNTKALAQKLAVLRQSNVLNMR--FTVRELTAFGRFPYSQGKLTTQ-DEQIIN 117
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
+ +E LD L+ I + ELSGGQ+Q IA + + + + LDEPL+ LD K ++
Sbjct: 118 QAIEYLD---LETIQYQYLDELSGGQRQLAFIAMVMAQDTDYVFLDEPLNNLDIKHSLQI 174
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVYG 236
STL ++ ++ +++ HD+N DK++ + + ++VA GS +V++ E++ +Y
Sbjct: 175 MSTLRRLAHELNKAVVVVIHDINFASCYADKIVALKKGEVVATGSVRDVIQSEVLSAIYD 234
Query: 237 PASKAVRV-GERL 248
+ + G+RL
Sbjct: 235 TPFNVIEMQGQRL 247
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 109 bits (271), Expect = 2e-23
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 15/219 (6%)
Query: 1 MEYVIEAENLTIMY-DSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQG 59
M + LT Y + +A++G+ + +G+ LLGPNGAGK+T + +L+ L G
Sbjct: 1 MSSALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSG 60
Query: 60 KILVFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
+ VFG K P+ ++ + VPQ F NF V D+V Y + IP ++
Sbjct: 61 SVSVFGHDLDKDPAGLKRCLGVVPQEF--NFNQFEKVFDIVVTQAGY------YGIPAKI 112
Query: 116 IKRGLE-ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
K E L LGL + ++ R LSGG K+R++IARAL+ P LL+LDEP + +D + R
Sbjct: 113 AKERAERYLTQLGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELR 172
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLID 213
S L+++ ++ GI++I+TTH + ++ + +ID
Sbjct: 173 RSMWSFLTELNQE-GISIILTTHYLEEAEQLCRNIAIID 210
>sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72466|pir||QREBVT glycine betaine/proline transport
protein proV - Salmonella typhimurium
>gi|47831|emb|CAA36921.1| (X52693) proV protein (AA
1-400) [Salmonella typhimurium]
Length = 400
Score = 109 bits (270), Expect = 3e-23
Identities = 77/238 (32%), Positives = 138/238 (57%), Gaps = 25/238 (10%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E ++E L++ V+ + +++GE +++G +G+GK+T++R+L L +G++
Sbjct: 32 EQILEKTGLSL------GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQV 85
Query: 62 LVFGK-----SPSEVRE----KVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNI 111
L+ G S +E+RE K+A V Q+F+L +P ++VLD + G + G+
Sbjct: 86 LIDGVDIAKISDAELREVRRKKIAMVFQSFAL---MPHMTVLDNTAFG-MELAGIA---- 137
Query: 112 PQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDP 171
QE ++ L+ L +GL+ ELSGG +QRV +ARAL NP++LL+DE SALDP
Sbjct: 138 AQERREKALDALRQVGLENYRHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDP 197
Query: 172 KARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRD 228
R E L K++ T++ +HD++ + IGD++ ++ ++V G+P+E+L +
Sbjct: 198 LIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255
>sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNC
>gi|7445925|pir||A65220 phosphonates transport
ATP-binding protein phnC - Escherichia coli (strain
K-12) >gi|216591|dbj|BAA14262.1| (D90227) ATP-binding
protein [Escherichia coli] >gi|536950|gb|AAA97005.1|
(U14003) HisP-like nucleotide binding protein
(ATP-binding protein) [Escherichia coli]
>gi|1790544|gb|AAC77067.1| (AE000482) ATP-binding
component of phosphonate transport [Escherichia coli
K12]
Length = 262
Score = 109 bits (270), Expect = 3e-23
Identities = 78/253 (30%), Positives = 135/253 (52%), Gaps = 22/253 (8%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGL------- 53
M+ +I E L ++ +A+ + + GE + LLGP+G+GK+TLLR L+GL
Sbjct: 1 MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSV 60
Query: 54 --HTNYQGKILVF-GKSPSEVREKVA---YVPQTFSLNFRVPLSVLDVVSMGGL-----Y 102
H G+ + G+ ++R+ A Y+ Q F+L R LSVL+ V +G L +
Sbjct: 61 GSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNR--LSVLENVLIGALGSTPFW 118
Query: 103 KKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLL 162
+ F Q+ +R L+ L +G+ A + LSGGQ+QRV IARALM +++L
Sbjct: 119 RTCFSWFTGEQK--QRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILA 176
Query: 163 DEPLSALDPKARIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSP 222
DEP+++LDP++ TL I ++ GIT+++T H V+ + ++++ + + V +
Sbjct: 177 DEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGS 236
Query: 223 EEVLRDEIIGKVY 235
+ +E +Y
Sbjct: 237 SQQFDNERFDHLY 249
>sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCJV
>gi|7442507|pir||A64881 probable ABC-type transport
protein b1318 - Escherichia coli
>gi|1742155|dbj|BAA14893.1| (D90769) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1742163|dbj|BAA14900.1| (D90770) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1787577|gb|AAC74400.1| (AE000229) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 322
Score = 109 bits (270), Expect = 3e-23
Identities = 73/247 (29%), Positives = 129/247 (51%), Gaps = 14/247 (5%)
Query: 5 IEAENLTIMYDS-VKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+ +++ +YD+ V V+ ++ E ++ +GP+G GK+T LR++AGL G +L+
Sbjct: 4 LSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLI 63
Query: 64 FGKSPSEVREKVAYVPQTFSLNFRVP-LSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLE- 121
GK ++V K + F P ++V D ++ G +K I +EVI +
Sbjct: 64 DGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQK------IAKEVIDERVNW 117
Query: 122 ILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTL 181
LGL+E K+ LSGGQ+QRV + RA++ + L+DEPLS LD K R++ + +
Sbjct: 118 AAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEI 177
Query: 182 SKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLV-AFGSPEEVLRDE----IIGKVYG 236
SK+ + + TMI THD + + +++++ +V G+P+ V + G +
Sbjct: 178 SKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGS 237
Query: 237 PASKAVR 243
PA +R
Sbjct: 238 PAMNFIR 244
>pir||F83058 probable ATP-binding component of ABC transporter PA4706 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|3044094|gb|AAC13285.1| (AF055999) ATPase component
[Pseudomonas aeruginosa]
>gi|9950964|gb|AAG08092.1|AE004884_10 (AE004884)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 255
Score = 109 bits (270), Expect = 3e-23
Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 23/262 (8%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
++ ENL+I +EGL +L+ GE L +LGPNGAGK+TLL L G +G +L+
Sbjct: 1 MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLLGALCGELEPAEGLVLL 60
Query: 64 FGKS----PSEVR-EKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
+ P R +++A +PQ+ SL F P+ VV G L H + + ++
Sbjct: 61 DERGLDDWPGVARAQRLAVLPQSSSLGFAFPVEA--VVGFG-----RLPHSSGRERDVQI 113
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALM-----SNPELLLLDEPLSALDPKA 173
E L +A +S+ LSGG++QRV +AR L ++LLLDEP SALDP
Sbjct: 114 VAEALAAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVLLLDEPTSALDP-- 171
Query: 174 RIEATSTLSKIKE--DMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEI 230
+ +TL + + G ++++ HD+N D+++L+ + G+PEEVLR E
Sbjct: 172 -LHQHTTLQAVHDFARRGASVLVILHDLNLAARYCDRLLLLQNGRPHLLGTPEEVLRPEP 230
Query: 231 IGKVYGPASKAVRVGERLYCII 252
+ V+G R ER + +I
Sbjct: 231 LRAVFGLEVLVQRHPERGHPLI 252
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 109 bits (270), Expect = 3e-23
Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 26/250 (10%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
V+E +LT Y + VEG+TF +++GE +GPNGAGKTT +R+L GL G +
Sbjct: 3 VVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLAEI 62
Query: 64 FG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRG 119
FG K E+R+ V Y+P S V + S Y+K + ++ +E+ G
Sbjct: 63 FGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYS-ASFYEK--VDWDYVKELC--G 117
Query: 120 LEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATS 179
+ LD KK +ELS G K++V I +ALM P+LL+LDEP + LDP +
Sbjct: 118 VFSLD-------TKKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFE 170
Query: 180 TLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPAS 239
L KE G T+ ++H ++ + + D+V +I ++R E + + G
Sbjct: 171 ILKNEKE-KGTTVFFSSHILSEVERLCDRVAMI--------KDGRIIRVEKVENLKGERY 221
Query: 240 KAVRV-GERL 248
K VRV GE L
Sbjct: 222 KVVRVKGENL 231
>emb|CAB56736.1| (AL121600) ABC transport protein, ATP-binding subunit [Streptomyces
coelicolor A3(2)]
Length = 252
Score = 109 bits (270), Expect = 3e-23
Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 14 YDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVRE 73
Y + LT ++ L+GPNG+GK+TLL VLAG+ G + G+ P
Sbjct: 31 YPGRPVLRQLTCEIPALAVTALVGPNGSGKSTLLGVLAGVIRPTSGDLHRDGERPP---- 86
Query: 74 KVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEI-----LDFLGL 128
A+VPQ ++ +PL+V V MG ++G P + R + LD LG+
Sbjct: 87 --AFVPQRGAVADALPLTVRQTVEMGRWAERG------PWRRLNRRDRLIVDSALDRLGI 138
Query: 129 KEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDM 188
++A + ELSGGQ+QR ++A+ L +LLLLDEP + LDP+AR T+ L+ + D
Sbjct: 139 ADLAPRQLGELSGGQRQRALVAQGLAQQSDLLLLDEPTTGLDPEARQRITALLTDLVAD- 197
Query: 189 GITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPASKA 241
G+T++ THD+ ++L L G P VL + +V+ A A
Sbjct: 198 GVTVVHATHDLEAARSAEACLLLRAGTLAGQGRPGRVLTASALAEVWAVAGHA 250
>pir||A82421 arginine ABC transporter, ATP-binding protein VCA0760 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658182|gb|AAF96658.1| (AE004404) arginine ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 247
Score = 109 bits (270), Expect = 3e-23
Identities = 84/239 (35%), Positives = 132/239 (55%), Gaps = 28/239 (11%)
Query: 1 MEYV---IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY 57
M+YV I + + Y + + + + F+ GETL+LLGP+GAGK++LLRVL L T
Sbjct: 1 MQYVRMSIRVKGINKSYGTTQVLHDIHFECASGETLVLLGPSGAGKSSLLRVLNLLETAD 60
Query: 58 QGKILV------FGKSPSE-----VREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGL 106
G++ + F P+E +R KV V Q + L ++VL+ + + G+
Sbjct: 61 NGQLHIANQSFDFSTHPTEQQGLALRRKVGMVFQQYHL--WPHMTVLENLVEAPVKVAGM 118
Query: 107 IHFNIPQEVIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPL 166
Q+ I EIL L L + A +LSGGQ+QRV IARALM P++LL DEP
Sbjct: 119 AKSQAKQQAI----EILKTLQLADKADAWPLQLSGGQQQRVAIARALMMKPDVLLFDEPT 174
Query: 167 SALDPKARIEATSTLSKIKEDM---GITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGS 221
+ALDP E T+ + KI +++ GIT ++ TH+V+ +I V+ +++ ++V G+
Sbjct: 175 AALDP----EITNQVVKIIKELSGTGITQVVVTHEVDFAKKIASHVLYLEKGRIVEHGT 229
>gb|AAG20232.1| (AE005098) phosphonates transport ATP-binding; PhnC [Halobacterium
sp. NRC-1]
Length = 280
Score = 109 bits (270), Expect = 3e-23
Identities = 76/247 (30%), Positives = 127/247 (50%), Gaps = 8/247 (3%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
I NL Y V A+E ++F++ GE +++LG +GAGK+TLLR L GL G + +
Sbjct: 4 ITVTNLHKSYGDVDALEDVSFEILDGEFVVILGESGAGKSTLLRCLNGLTEPTTGSVKID 63
Query: 65 GKSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH----FNIPQEVIKRGL 120
G+ + R+ V + Q N ++ G L + L+ +N +E + L
Sbjct: 64 GEPVNGPRDDVGMIFQQH--NIIEEMTAYTNALSGSLNRTSLVRSLFQWNDREEKLD-AL 120
Query: 121 EILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATST 180
LD +GL + A++ +SGGQ+QRV I+RAL+ +P LLL DEP+++LDP +
Sbjct: 121 RALDTVGLLDDAEQRAGRMSGGQQQRVGISRALVQDPNLLLADEPVASLDPASAESVMGY 180
Query: 181 LSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGP-AS 239
+ + +T + + H VN E G + + + V F + L ++I +YG +
Sbjct: 181 IKDAADQHDLTTLASLHQVNLAREFGQRFIGMKDGRVIFDGYRDDLTFDVIDDIYGNIQT 240
Query: 240 KAVRVGE 246
A+R G+
Sbjct: 241 DAIRTGD 247
>sp|P72477|ABCX_STRMU PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN
>gi|2062756|gb|AAC04616.1| (U94990) putative ABC
transporter [Streptococcus mutans]
>gi|2952525|gb|AAC05770.1| (AF051356) ABC transporter
[Streptococcus mutans]
Length = 260
Score = 109 bits (269), Expect = 4e-23
Identities = 69/256 (26%), Positives = 139/256 (53%), Gaps = 10/256 (3%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
+I +N+T+ + L +K+KKGE ++LG NG+GKTTLL+++ + + QG++ +
Sbjct: 3 LISMKNVTLKKQGKILLNNLNWKVKKGENWVILGLNGSGKTTLLKLIMAEYWSTQGQVEI 62
Query: 64 ----FGKSP-SEVREKVAYVPQTFSLNFRVPLSVL-DVVSMGGLYKKGLIHFNIPQEVIK 117
FG+ +R K+ V + R+P ++L + + + G YK +++ + +
Sbjct: 63 LNTRFGQGDIPNMRTKIGVVGSFIAE--RLPANMLAEKIVLTGKYKSSILYKEYDETELN 120
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
++L +G K + + + LS G+KQ ++IAR+LM +PE+++LDE S LD AR +
Sbjct: 121 EARQMLTVIGGKHLLGRIYSSLSQGEKQLLLIARSLMEDPEIIILDEATSGLDLFAREKL 180
Query: 178 TSTLSKIKE-DMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIGKVY 235
+ + KI E T++ TH + + ++L+ R K+VA G ++++ +++ Y
Sbjct: 181 LTQVEKITELPHAPTILYVTHHAEEITDKMSHILLLRRGKIVAQGPKKDIITPQVLENFY 240
Query: 236 GPASKAVRVGERLYCI 251
+ + ++ + I
Sbjct: 241 ESPVNIISIDDKRFFI 256
>sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|2182424|gb|AAB91694.1|
(AE000076) NodI [Rhizobium sp. NGR234]
Length = 343
Score = 109 bits (269), Expect = 4e-23
Identities = 88/276 (31%), Positives = 141/276 (50%), Gaps = 34/276 (12%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
+ IE N++ Y V+ L+F + GE LLGPNGAGK+T+ R++ GL +G I
Sbjct: 42 DVAIELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPDEGTI 101
Query: 62 LVFGKS-PSEVR---EKVAYVPQ--TFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
V G+ P+ R ++ VPQ T F ++L GL+ + L +E
Sbjct: 102 TVLGEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGLHTREL------EEA 155
Query: 116 IKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARI 175
I +LDF L+ A +LSGG ++R+ +A AL+++P+LL+LDEP + LDP AR
Sbjct: 156 IP---PLLDFARLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARH 212
Query: 176 EATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLID--RKLVAFGSPEEVLRDEI--- 230
L + +G T+++TTH + + D++ +I+ RK+V G P ++ ++I
Sbjct: 213 LIWERLRSLLA-LGKTILLTTHFMEEADRLCDRLCVIEHGRKIVE-GRPHALIDEQIGCD 270
Query: 231 -----------IGKVYGPASKAVRV-GERLYCIIGD 254
+ V GP ++ V V GE L+C D
Sbjct: 271 VIEIYGGNPRELTSVVGPYAQRVEVSGETLFCYSSD 306
>pir||G72290 branched chain amino acid ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981686|gb|AAD36215.1|AE001771_8 (AE001771) branched
chain amino acid ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 239
Score = 109 bits (269), Expect = 4e-23
Identities = 78/243 (32%), Positives = 132/243 (54%), Gaps = 19/243 (7%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
+ V+E ++L + Y ++ A++G+ K+ +G+ + L+G NGAGKTT L +AGL +GKI
Sbjct: 3 DIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKI 62
Query: 62 LVFGK----SPSEV--REKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEV 115
+ G+ P+ V R +A VP+ L+V + + MG +K +E
Sbjct: 63 IFNGQDITNKPAHVINRMGIALVPE--GRRIFPELTVYENLMMGAYNRK-------DKEG 113
Query: 116 IKRGLEILD--FLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKA 173
IKR LE + F LKE K+ LSGG++Q + I RALMS P+LL++DEP L P
Sbjct: 114 IKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPIL 173
Query: 174 RIEATSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEVLRDEIIG 232
E + KI ++ G T+++ + +++ +++ ++V G E+L +E++
Sbjct: 174 VSEVFEVIQKINQE-GTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVR 232
Query: 233 KVY 235
K Y
Sbjct: 233 KAY 235
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 109 bits (269), Expect = 4e-23
Identities = 69/229 (30%), Positives = 125/229 (54%), Gaps = 12/229 (5%)
Query: 2 EYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKI 61
E +IE +L+ Y + + V+G+ ++KGE + LLGPNGAGK+T + +++ L G +
Sbjct: 590 ENMIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDV 649
Query: 62 LVFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIK 117
L+ G K +R + VPQ ++ D+ + L G I+ +E+
Sbjct: 650 LIKGGSIHKQSKAIRSILGVVPQEIAVYH-------DLTARENLAFFGKIYGLKGEELKH 702
Query: 118 RGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEA 177
R L +GL+E SGG K+R+ IA AL+ PEL+++DEP +DP++R
Sbjct: 703 RMESTLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHI 762
Query: 178 TSTLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
T+ + ++ +T+I T+H + + + D++ ++DR +++A G+ +EV
Sbjct: 763 LETVKTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEV 811
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 108 bits (268), Expect = 6e-23
Identities = 75/228 (32%), Positives = 121/228 (52%), Gaps = 15/228 (6%)
Query: 1 MEYVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGK 60
M+ + N+T + AV ++F ++KGE +LGPNGAGKTT++ ++ GL +G+
Sbjct: 2 MKEAVTVSNVTKHFQRKTAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGE 61
Query: 61 ILVFGKSP--SEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
I +F + P +VREK+ + Q S+ L V +++ + Y P + +
Sbjct: 62 IKLFNRVPDDQQVREKIGVMLQEVSV--MPGLKVDEILELFRSY--------YPNPLSMK 111
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
L L L KE K +LSGGQK+R+ A AL NPELL+LDEP +D +R
Sbjct: 112 ELVSLTAL-TKEDLKTRAEKLSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFW 170
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEV 225
T+ + D G T+I +TH + + +++ + +LVA GSP ++
Sbjct: 171 QTIHGL-SDQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQI 217
>pir||E70943 probable ABC-type sugar transport protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2896775|emb|CAA17252.1|
(AL021899) hypothetical protein Rv2038c [Mycobacterium
tuberculosis]
Length = 357
Score = 108 bits (268), Expect = 6e-23
Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 9/231 (3%)
Query: 19 AVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVFGKSPSEVREKVAYV 78
A++ L + GE ++L+GP+G GKTT LR++AGL T G+I + + +EV K V
Sbjct: 20 ALDRLDLIVGDGEFVVLVGPSGCGKTTSLRMVAGLETLDCGRIRIGERDVTEVDPKDRDV 79
Query: 79 PQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKRGLEILDFLGLKEIAKKSFRE 138
F N+ + + +MG K I E+ +R L L L+ + ++
Sbjct: 80 AMVFQ-NYALYPHMTVAQNMGFALKVAKIG---KAEIRERVLAAAKLLDLQSYLDRKPKD 135
Query: 139 LSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEATSTLSKIKEDMGITMIITTHD 198
LSGGQ+QRV + RA++ P++ L+DEPLS LD K R + + ++ ++ +G T + THD
Sbjct: 136 LSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRGQTRNQIAALQRQLGTTTVYVTHD 195
Query: 199 VNPLIEIGDKV-MLIDRKLVAFGSPEEVLRDE----IIGKVYGPASKAVRV 244
+ +GD+V +L D L SP E+ R+ + G + PA R+
Sbjct: 196 QVEAMTMGDRVAVLSDGVLQQCASPRELYRNPGNVFVAGFIGSPAMNLFRL 246
>sp|Q9ZKW3|Y888_HELPJ PROBABLE IRON CHELATIN TRANSPORT ATP-BINDING PROTEIN HP0888
>gi|7445834|pir||G71884 iron (III) dicitrate transport
system ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4155391|gb|AAD06401.1| (AE001511) IRON(III)
DICITRATE TRANSPORT SYSTEM ATP-BINDING PROTEIN
[Helicobacter pylori J99]
Length = 255
Score = 108 bits (268), Expect = 6e-23
Identities = 79/255 (30%), Positives = 128/255 (49%), Gaps = 16/255 (6%)
Query: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL- 62
V+E +NL+ Y ++ L+F + K +L PNG+GKTTLL+ L GL + +
Sbjct: 2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIK 61
Query: 63 -----VFGKSPSEVREKVAYVPQT--FSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQ-E 114
+ P E + +AY+PQ ++ NF SVLD V MG L F +P+ +
Sbjct: 62 ACNKDILPLKPYEKAKLIAYIPQVEYYAFNF----SVLDFVLMGKATHLNL--FAMPKAK 115
Query: 115 VIKRGLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKAR 174
IK +L+ L L+ + + +LSGGQ+Q V++AR+L+ LLLLDEP SALD K +
Sbjct: 116 HIKEATSVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQ 175
Query: 175 IEATSTLSKIKEDMGITMIITTHDVNPLIEIGDK-VMLIDRKLVAFGSPEEVLRDEIIGK 233
+ + +++++ HD N + VML D+KL S + +
Sbjct: 176 ALFFDAIKDEMKKRELSVLVNIHDPNLVARHSTHVVMLKDKKLFLQASTPIAMTSHNLSA 235
Query: 234 VYGPASKAVRVGERL 248
+Y +A+ ++L
Sbjct: 236 LYDTPLEAIWHDDKL 250
>pir||T36888 probable iron-siderophore uptake system ATP-binding component -
Streptomyces coelicolor >gi|5738501|emb|CAB52849.1|
(AL109848) putative iron-siderophore uptake system
ATP-binding component [Streptomyces coelicolor A3(2)]
Length = 301
Score = 108 bits (268), Expect = 6e-23
Identities = 70/239 (29%), Positives = 130/239 (54%), Gaps = 11/239 (4%)
Query: 5 IEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILVF 64
+ AEN+T+ YD E L+ ++ +++GPN GK+TLLR L+ + QG++L+
Sbjct: 23 LTAENVTLAYDQRVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRVLLD 82
Query: 65 GK-----SPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIH-FNIPQEVIKR 118
G +V + +PQ+ + +V D+V G +G++ ++ E + +
Sbjct: 83 GSVIQSMPAKQVARTLGLLPQSSIAPDGI--TVGDLVGRGRYPHQGILRQWSTEDERVVQ 140
Query: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
E + G+ E+A + ELSGGQ+QRV IA AL LLLLDEP + LD + +I+
Sbjct: 141 --ESMARTGISELADRYVDELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVL 198
Query: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDK-VMLIDRKLVAFGSPEEVLRDEIIGKVYG 236
+++ E+ G T++ HD+N + L + +++A G+P++++ +++ +V+G
Sbjct: 199 DLCAELHEEQGRTLVAVLHDLNHAARYATHLIALREGQVIAEGAPKDIVTADLVERVFG 257
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.141 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91686860
Number of Sequences: 2977
Number of extensions: 3743563
Number of successful extensions: 22673
Number of sequences better than 1.0e-10: 2029
Number of HSP's better than 0.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 1674
Number of HSP's that attempted gapping in prelim test: 19156
Number of HSP's gapped (non-prelim): 2599
length of query: 260
length of database: 189,106,746
effective HSP length: 57
effective length of query: 203
effective length of database: 154,992,987
effective search space: 31463576361
effective search space used: 31463576361
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)