BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0362 (rps11P) DE:SSU ribosomal protein S11P (rps11P)
(137 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O59304|RS11_PYRHO 30S RIBOSOMAL PROTEIN S11P >gi|7440318|pir|... 278 2e-74
gi|11499864 SSU ribosomal protein S11P (rps11P) [Archaeoglobus f... 211 3e-54
sp|O26143|RS11_METTH 30S RIBOSOMAL PROTEIN S11P >gi|7440325|pir|... 206 8e-53
sp|Q9YB55|RS11_AERPE 30S RIBOSOMAL PROTEIN S11P >gi|7440331|pir|... 205 2e-52
gb|AAK40434.1| SSU ribosomal protein S11AB (rps11AB) [Sulfolobus... 194 5e-49
sp|P95988|RS11_SULSO 30S RIBOSOMAL PROTEIN S11P >gi|7440329|pir|... 194 5e-49
sp|P54021|RS11_METJA 30S RIBOSOMAL PROTEIN S11P >gi|2119082|pir|... 189 2e-47
sp|P39469|RS11_SULAC 30S RIBOSOMAL PROTEIN S11P >gi|629413|pir||... 183 9e-46
emb|CAC12160.1| (AL445066) probable 30S ribosomal protein S11 [T... 182 1e-45
sp|P46295|RS14_CHLRE 40S RIBOSOMAL PROTEIN S14 >gi|1076215|pir||... 181 3e-45
sp|O14150|RS14_SCHPO 40S RIBOSOMAL PROTEIN S14 >gi|7489969|pir||... 179 1e-44
gb|AAD26263.1| (AF119387) ribosomal protein S14 [Stomoxys calcit... 178 2e-44
sp|P14130|RS14_DROME 40S RIBOSOMAL PROTEIN S14 >gi|85130|pir||A3... 178 2e-44
sp|P19950|R141_MAIZE 40S RIBOSOMAL PROTEIN S14 (CLONE MCH1) >gi|... 178 3e-44
gi|10383793 Ribosomal protein S14A (rp59A); Rps14ap [Saccharomyc... 177 4e-44
emb|CAA54769.1| (X77688) ribosomal protein rp59 [Saccharomyces c... 177 4e-44
sp|P27069|RS14_KLULA 40S RIBOSOMAL PROTEIN S14 (RP59) >gi|101138... 177 4e-44
gi|6322270 Ribosomal protein S14B (rp59B); Rps14bp [Saccharomyce... 177 4e-44
sp|P06367|R141_YEAST 40S RIBOSOMAL PROTEIN S14-A (RP59A) >gi|192... 177 4e-44
pir||T08441 ribosomal protein S14, cytosolic - Arabidopsis thali... 177 5e-44
sp|P13471|RS14_RAT 40S RIBOSOMAL PROTEIN S14 >gi|70945|pir||R3RT... 176 7e-44
pir||R5BY59 ribosomal protein S14.e.A, cytosolic - yeast (Saccha... 176 7e-44
sp|P19951|R142_MAIZE 40S RIBOSOMAL PROTEIN S14 (CLONE MCH2) >gi|... 176 7e-44
sp|P48150|RS14_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN S14 >gi|7500... 176 7e-44
gi|10181112 ribosomal protein S14 [Mus musculus] >gi|3097244|emb... 176 7e-44
gi|5032051 ribosomal protein S14 [Homo sapiens] >gi|11526364|ref... 176 7e-44
gb|AAD26971.1|AC007135_8 (AC007135) 40S ribosomal protein S14 [A... 176 7e-44
gb|AAF00665.1|AC008153_17 (AC008153) putative 40S ribosomal prot... 176 7e-44
sp|Q08699|RS14_PODCA 40S RIBOSOMAL PROTEIN S14 >gi|396252|emb|CA... 175 2e-43
pir||JE0129 ribosomal protein S14 - mouse 175 2e-43
pir||T43939 ribosomal protein S11 [similarity] - Halobacterium s... 175 3e-43
sp|P48855|RS14_PROCL 40S RIBOSOMAL PROTEIN S14 >gi|434787|dbj|BA... 173 6e-43
sp|O22584|RS14_LUPLU 40S RIBOSOMAL PROTEIN S14 >gi|7440341|pir||... 168 2e-41
sp|P10788|RS11_HALMA 30S RIBOSOMAL PROTEIN S11P (HMAS11) (HS19) ... 167 5e-41
gb|AAD23964.1|AF108724_1 (AF108724) ribosomal protein S14 [Tortu... 167 5e-41
pir||S11667 ribosomal protein S14.e - Neurospora crassa 166 1e-40
sp|P19800|RS14_TRYBB 40S RIBOSOMAL PROTEIN S14 >gi|84052|pir||A3... 165 2e-40
sp|P19115|RS14_NEUCR 40S RIBOSOMAL PROTEIN S14 (CRP2) >gi|2995|e... 161 4e-39
dbj|BAA22022.1| (AB002784) ribosomal protein S14 [Entamoeba hist... 155 1e-37
prf||1501255B ribosomal protein S19 [Haloarcula marismortui] 154 3e-37
gb|AAG19519.1| (AE005043) 30S ribosomal protein S11P; Rps11p [Ha... 147 6e-35
sp|P42036|RS14_ARATH 40S RIBOSOMAL PROTEIN S14 122 2e-27
emb|CAB46816.1| (AJ388514) Ribosomal protein S14 [Canis familiaris] 114 5e-25
sp|P93377|RS14_TOBAC 40S RIBOSOMAL PROTEIN S14 >gi|1762931|gb|AA... 100 9e-21
sp|P10789|RS11_BACST 30S RIBOSOMAL PROTEIN S11 (BS11) >gi|70939|... 99 2e-20
pir||F83113 30S ribosomal protein S11 PA4240 [imported] - Pseudo... 99 2e-20
sp|Q9X1I4|RS11_THEMA 30S RIBOSOMAL PROTEIN S11 >gi|7440338|pir||... 99 3e-20
sp|O66485|RS11_AQUAE 30S RIBOSOMAL PROTEIN S11 >gi|7440316|pir||... 98 6e-20
sp|P57568|RS11_BUCAI 30S RIBOSOMAL PROTEIN S11 >gi|10039160|dbj|... 94 7e-19
sp|P04969|RS11_BACSU 30S RIBOSOMAL PROTEIN S11 (BS11) >gi|70938|... 94 9e-19
sp|P02366|RS11_ECOLI 30S RIBOSOMAL PROTEIN S11 >gi|70937|pir||R3... 93 1e-18
pir||F81229 30S ribosomal protein S11 NMB0166 [imported] - Neiss... 93 1e-18
pir||C82061 ribosomal protein S11 VC2573 [imported] - Vibrio cho... 93 1e-18
sp|Q9Z3E9|RS11_XANCP 30S RIBOSOMAL PROTEIN S11 >gi|4098575|gb|AA... 93 1e-18
sp|O50633|RS11_BACHD 30S RIBOSOMAL PROTEIN S11 >gi|11276589|pir|... 92 2e-18
sp|P44379|RS11_HAEIN 30S RIBOSOMAL PROTEIN S11 >gi|1075261|pir||... 92 3e-18
sp|P73298|RS11_SYNY3 30S RIBOSOMAL PROTEIN S11 >gi|7440315|pir||... 91 6e-18
dbj|BAA84523.1| (AB032408) ribosomal protein S11 [Shewanella vio... 91 6e-18
sp|P72403|RS11_STRCO 30S RIBOSOMAL PROTEIN S11 >gi|7481750|pir||... 90 1e-17
sp|Q9X7A0|RS11_MYCLE 30S RIBOSOMAL PROTEIN S11 >gi|4539114|emb|C... 90 1e-17
pir||G82714 30S ribosomal protein S11 XF1174 [imported] - Xylell... 90 1e-17
sp|O06326|RS11_MYCTU 30S RIBOSOMAL PROTEIN S11 >gi|7440320|pir||... 89 2e-17
gi|11465760 30S ribosomal protein S11 [Porphyra purpurea] >gi|17... 89 2e-17
gi|11467450 30S ribosomal protein S11 [Odontella sinensis] >gi|1... 88 4e-17
sp|O24709|RS11_SYNP6 30S RIBOSOMAL PROTEIN S11 >gi|2446912|dbj|B... 87 8e-17
sp|Q9XD11|RS11_LEPIN 30S RIBOSOMAL PROTEIN S11 >gi|5163229|gb|AA... 87 1e-16
sp|P45812|RS11_MYCBO 30S RIBOSOMAL PROTEIN S11 86 1e-16
gi|11467400 ribosomal protein S11 [Cyanophora paradoxa] >gi|1350... 86 2e-16
pir||JE0400 ribosomal protein S11 - Thermus aquaticus >gi|108355... 85 3e-16
gi|11466358 ribosomal protein S11 [Mesostigma viride] >gi|725950... 85 4e-16
gi|11467737 ribosomal protein S11 [Guillardia theta] >gi|3914831... 84 6e-16
gi|11466736 rps11 [Marchantia polymorpha] >gi|133725|sp|P06364|R... 83 2e-15
gb|AAF19040.1| (L08896) 30S ribosomal protein S11 [Mycoplasma ga... 83 2e-15
sp|O51454|RS11_BORBU 30S RIBOSOMAL PROTEIN S11 >gi|7440324|pir||... 82 2e-15
gi|7525066 ribosomal protein S11 [Arabidopsis thaliana] >gi|6685... 81 5e-15
sp|O83241|RS11_TREPA 30S RIBOSOMAL PROTEIN S11 >gi|7440319|pir||... 81 6e-15
sp|Q46451|RS11_MYCSP 30S RIBOSOMAL PROTEIN S11 >gi|625802|pir||D... 80 1e-14
sp|Q9Z7S7|RS11_CHLPN 30S RIBOSOMAL PROTEIN S11 >gi|7440337|pir||... 79 2e-14
gi|11497559 ribosomal protein S11 [Spinacia oleracea] >gi|763614... 79 2e-14
gi|11467767 ribosomal protein S11 [Nephroselmis olivacea] >gi|58... 78 3e-14
pir||A82918 ribosomal protein S11 UU256 [imported] - Ureaplasma ... 78 3e-14
pir||C81663 ribosomal protein S11 TC0795 [imported] - Chlamydia ... 78 4e-14
sp|P47761|RS11_CHLTR 30S RIBOSOMAL PROTEIN S11 >gi|3328945|gb|AA... 78 6e-14
sp|Q9ZCS8|RS11_RICPR 30S RIBOSOMAL PROTEIN S11 >gi|7440330|pir||... 77 7e-14
emb|CAB67192.1| (AJ271079) ribosomal protein S11 [Oenothera elat... 77 7e-14
pir||I40745 ribosomal protein S11 - Chlamydia trachomatis >gi|97... 77 9e-14
gi|7524920 30S ribosomal protein S11 [Chlorella vulgaris] >gi|30... 77 9e-14
gi|11465991 ribosomal protein S11 [Nicotiana tabacum] >gi|133729... 76 1e-13
sp|P06587|RR11_PEA CHLOROPLAST 30S RIBOSOMAL PROTEIN S11 >gi|709... 76 2e-13
gb|AAC95317.1| (AF050665) ribosomal protein S11 [Spirogyra maxima] 76 2e-13
pir||G75312 ribosomal protein S11 - Deinococcus radiodurans (str... 76 2e-13
sp|P06506|RR11_SPIOL CHLOROPLAST 30S RIBOSOMAL PROTEIN S11 >gi|8... 75 5e-13
sp|P56018|RS11_HELPY 30S RIBOSOMAL PROTEIN S11 >gi|7440327|pir||... 75 5e-13
gi|11466522 ribosomal protein S11 [Reclinomonas americana] >gi|7... 74 6e-13
sp|Q9ZJT3|RS11_HELPJ 30S RIBOSOMAL PROTEIN S11 >gi|7440335|pir||... 74 6e-13
gi|11467041 30S ribosomal protein S11 [Euglena gracilis] >gi|133... 73 2e-12
pir||G81254 30S ribosomal protein S11 Cj1593 [imported] - Campyl... 72 2e-12
gi|7524685 ribosomal protein S11 [Pinus thunbergii] >gi|1173180|... 71 7e-12
gi|11467224 ribosomal protein S11 [Zea mays] >gi|133724|sp|P0956... 70 9e-12
gi|11466822 ribosomal protein S11 [Oryza sativa] >gi|133726|sp|P... 70 1e-11
gi|11465442 unknown; 30S ribosomal protein S11 [Cyanidium caldar... 69 2e-11
gi|11467126 rps11 [Marchantia polymorpha] >gi|417734|sp|P26870|R... 69 3e-11
sp|Q29303|RS14_PIG 40S RIBOSOMAL PROTEIN S14 68 5e-11
sp|Q50296|RS11_MYCPN 30S RIBOSOMAL PROTEIN S11 >gi|2127653|pir||... 67 8e-11
>sp|O59304|RS11_PYRHO 30S RIBOSOMAL PROTEIN S11P >gi|7440318|pir||F71043 probable
ribosomal protein S11 - Pyrococcus horikoshii
>gi|7440332|pir||D75171 ssu ribosomal protein s11p
(rps11p) PAB0362 - Pyrococcus abyssi (strain Orsay)
>gi|3258067|dbj|BAA30750.1| (AP000006) 137aa long
hypothetical 30S ribosomal protein S11 [Pyrococcus
horikoshii] >gi|5457961|emb|CAB49451.1| (AJ248284) SSU
ribosomal protein S11P (rps11P) [Pyrococcus abyssi]
Length = 137
Score = 278 bits (704), Expect = 2e-74
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MSEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAA 60
MSEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAA
Sbjct: 1 MSEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAA 60
Query: 61 MLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTP 120
MLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTP
Sbjct: 61 MLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTP 120
Query: 121 IPHDGTRPKGGRRGRRV 137
IPHDGTRPKGGRRGRRV
Sbjct: 121 IPHDGTRPKGGRRGRRV 137
>gi|11499864 SSU ribosomal protein S11P (rps11P) [Archaeoglobus fulgidus]
>gi|6226053|sp|O28001|RS11_ARCFU 30S RIBOSOMAL PROTEIN
S11P >gi|7440326|pir||C69535 SSU ribosomal protein S11P
(rps11P) homolog - Archaeoglobus fulgidus
>gi|2648247|gb|AAB88982.1| (AE000947) SSU ribosomal
protein S11P (rps11P) [Archaeoglobus fulgidus]
Length = 133
Score = 211 bits (532), Expect = 3e-54
Identities = 105/129 (81%), Positives = 113/129 (87%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK +WGIAHIYSSYNNTII ITDITGAE I+R SGGM+VKADRDE +PY AM AA RAA
Sbjct: 5 KKGGRWGIAHIYSSYNNTIITITDITGAEIIARVSGGMIVKADRDEGNPYTAMQAALRAA 64
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
A EKGI GVHI+VRAPGG+K TPGPGAQAAIRALARAGLKIGR+EDVTPIPHDGTRP
Sbjct: 65 AIAKEKGIDGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGTRP 124
Query: 129 KGGRRGRRV 137
GG+RGRRV
Sbjct: 125 PGGKRGRRV 133
>sp|O26143|RS11_METTH 30S RIBOSOMAL PROTEIN S11P >gi|7440325|pir||D69146 ribosomal
protein S11 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621072|gb|AAB84544.1| (AE000796)
ribosomal protein S14 (E.coli S11) [Methanobacterium
thermoautotrophicum]
Length = 130
Score = 206 bits (519), Expect = 8e-53
Identities = 98/128 (76%), Positives = 116/128 (90%)
Query: 10 KKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAE 69
+KEKWGIA+IYSS+NNTII ITDITGAETI++WSGG VV+ADR E SP+AAM AA RAA+
Sbjct: 3 EKEKWGIANIYSSFNNTIITITDITGAETITQWSGGKVVRADRQESSPFAAMEAATRAAD 62
Query: 70 EALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPK 129
+A EKGIVG+HI+VRAPGG+ +TPGPGAQAAIRALARAG++IG++EDVTPIPHDGT
Sbjct: 63 DAKEKGIVGLHIKVRAPGGNGPRTPGPGAQAAIRALARAGMRIGKIEDVTPIPHDGTGRP 122
Query: 130 GGRRGRRV 137
GG+RGRRV
Sbjct: 123 GGKRGRRV 130
>sp|Q9YB55|RS11_AERPE 30S RIBOSOMAL PROTEIN S11P >gi|7440331|pir||B72557 probable
ribosomal protein S11 APE1742 - Aeropyrum pernix
(strain K1) >gi|5105430|dbj|BAA80743.1| (AP000062) 131aa
long hypothetical 30S ribosomal protein S11 [Aeropyrum
pernix]
Length = 131
Score = 205 bits (515), Expect = 2e-52
Identities = 95/125 (76%), Positives = 112/125 (89%)
Query: 13 KWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEAL 72
KWG+AHIYSS+NNT +HITD+TGAET++R +GGMVVKADR++PSPYAAM+AA RAA++A+
Sbjct: 7 KWGVAHIYSSFNNTHVHITDLTGAETVARVTGGMVVKADREKPSPYAAMIAASRAAQKAM 66
Query: 73 EKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGR 132
E+GI +HI+VRAPGG KTPGPGAQAAIRALARAG IGR+EDVTPIPHD TR GGR
Sbjct: 67 ERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTTRRPGGR 126
Query: 133 RGRRV 137
RGRRV
Sbjct: 127 RGRRV 131
>gb|AAK40434.1| SSU ribosomal protein S11AB (rps11AB) [Sulfolobus solfataricus]
Length = 132
Score = 194 bits (487), Expect = 5e-49
Identities = 94/129 (72%), Positives = 111/129 (85%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
+++ +WGIAHIY+S NNT++ I+D+TGAE ISR SGGMVVKADR++ SPYAAMLAA +AA
Sbjct: 4 RREIRWGIAHIYASQNNTLLTISDLTGAEIISRASGGMVVKADREKSSPYAAMLAANKAA 63
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+ALEKGI+ +HI+VRAPGG SKTPGPGAQ AIRALARAG IGR+EDVTPIPHD R
Sbjct: 64 SDALEKGIMALHIKVRAPGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDTIRR 123
Query: 129 KGGRRGRRV 137
GGRRGRRV
Sbjct: 124 PGGRRGRRV 132
>sp|P95988|RS11_SULSO 30S RIBOSOMAL PROTEIN S11P >gi|7440329|pir||S75416 ribosomal
protein S14 - Sulfolobus solfataricus
>gi|1707822|emb|CAA69530.1| (Y08257) ribosomal protein
S14 [Sulfolobus solfataricus]
Length = 132
Score = 194 bits (487), Expect = 5e-49
Identities = 94/129 (72%), Positives = 111/129 (85%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
+++ +WGIAHIY+S NNT++ I+D+TGAE ISR SGGMVVKADR++ SPYAAMLAA +AA
Sbjct: 4 RREIRWGIAHIYASQNNTLLTISDLTGAEIISRASGGMVVKADREKSSPYAAMLAANKAA 63
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+ALEKGI+ +HI+VRAPGG SKTPGPGAQ AIRALARAG IGR+EDVTPIPHD R
Sbjct: 64 SDALEKGIMALHIKVRAPGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDTIRR 123
Query: 129 KGGRRGRRV 137
GGRRGRRV
Sbjct: 124 PGGRRGRRV 132
>sp|P54021|RS11_METJA 30S RIBOSOMAL PROTEIN S11P >gi|2119082|pir||H64323 ribosomal
protein S11 - Methanococcus jannaschii
>gi|1590936|gb|AAB98171.1| (U67475) SSU ribosomal
protein S11P (rpsK) [Methanococcus jannaschii]
Length = 129
Score = 189 bits (474), Expect = 2e-47
Identities = 91/121 (75%), Positives = 101/121 (83%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
+KKEKWGI HIYSSYNNTIIH TDITGAETI+R SGG V + RDE SPYAAM AA + A
Sbjct: 4 QKKEKWGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLA 63
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
E E+GI +HI+VRAPGGS K PGPGAQAAIRALARAGL+IGR+EDVTP+PHDGT P
Sbjct: 64 EVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGTTP 123
Query: 129 K 129
K
Sbjct: 124 K 124
>sp|P39469|RS11_SULAC 30S RIBOSOMAL PROTEIN S11P >gi|629413|pir||S47022 ribosomal protein
S11 - Sulfolobus acidocaldarius
>gi|517289|emb|CAA56479.1| (X80194) ribosomal protein
S11 [Sulfolobus acidocaldarius]
Length = 132
Score = 183 bits (459), Expect = 9e-46
Identities = 90/129 (69%), Positives = 106/129 (81%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
+++ +WG A IY+S NNTII ITDITGAE IS+ SGGMVVKADR++PSPYAAMLAA +AA
Sbjct: 4 RREIRWGNARIYASQNNTIITITDITGAEIISKASGGMVVKADREKPSPYAAMLAANKAA 63
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+A +KGI +HI+VRA GG +TPGPGAQ AIRALARAG IGR+EDVTP+PHD R
Sbjct: 64 NDAFDKGISAIHIKVRAQGGYGFQTPGPGAQPAIRALARAGFIIGRIEDVTPLPHDTIRR 123
Query: 129 KGGRRGRRV 137
GGRRGRRV
Sbjct: 124 PGGRRGRRV 132
>emb|CAC12160.1| (AL445066) probable 30S ribosomal protein S11 [Thermoplasma
acidophilum]
Length = 130
Score = 182 bits (458), Expect = 1e-45
Identities = 91/130 (70%), Positives = 107/130 (82%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+++ K GIAHIY+S NNTIIH+TD TGAETI+ SGGMVVK DRD+ SPYAAM AA
Sbjct: 1 MRQMNKTGIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMV 60
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
+E EK I + I+VRAPGG+KSK PGPGAQAAIRAL+RAGLKI R+E+VTPIPHDGT+
Sbjct: 61 SEALKEKEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGTK 120
Query: 128 PKGGRRGRRV 137
KGG+RGRRV
Sbjct: 121 KKGGKRGRRV 130
>sp|P46295|RS14_CHLRE 40S RIBOSOMAL PROTEIN S14 >gi|1076215|pir||A56064 ribosomal protein
S14 - Chlamydomonas reinhardtii
>gi|463857|gb|AAB60274.1| (U06937) ribosomal protein S14
[Chlamydomonas reinhardtii]
Length = 153
Score = 181 bits (455), Expect = 3e-45
Identities = 83/124 (66%), Positives = 108/124 (86%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHI++S+N+T +H+TD++G ETISR +GGM VKADRDE SPYAAMLAA+ A++ E
Sbjct: 30 FGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKE 89
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+++KTPGPGAQ+A+RALARAG+KIGR+EDVTPIP D TR KGGRR
Sbjct: 90 LGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRR 149
Query: 134 GRRV 137
GRR+
Sbjct: 150 GRRL 153
>sp|O14150|RS14_SCHPO 40S RIBOSOMAL PROTEIN S14 >gi|7489969|pir||T39777 40s ribosomal
protein s14 - fission yeast (Schizosaccharomyces pombe)
>gi|7489970|pir||T38751 40s ribosomal protein S14
subunit - fission yeast (Schizosaccharomyces pombe)
>gi|2414647|emb|CAB16591.1| (Z99296) 40s ribosomal
protein S14 subunit [Schizosaccharomyces pombe]
>gi|3006190|emb|CAA18410.1| (AL022304) 40s ribosomal
protein s14 [Schizosaccharomyces pombe]
Length = 139
Score = 179 bits (450), Expect = 1e-44
Identities = 84/124 (67%), Positives = 105/124 (83%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHI++S+N+T +HITD+TG ETI R +GGM VK DRDE SPYAAMLAA+ AA + E
Sbjct: 16 FGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDAAAKCKE 75
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+ +KTPGPGAQAA+RALARAG++IGR+EDVTPIP D TR KGGRR
Sbjct: 76 VGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIPTDSTRRKGGRR 135
Query: 134 GRRV 137
GRR+
Sbjct: 136 GRRL 139
>gb|AAD26263.1| (AF119387) ribosomal protein S14 [Stomoxys calcitrans]
Length = 151
Score = 178 bits (448), Expect = 2e-44
Identities = 82/124 (66%), Positives = 106/124 (85%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHIY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ AE+
Sbjct: 28 FGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+ +KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>sp|P14130|RS14_DROME 40S RIBOSOMAL PROTEIN S14 >gi|85130|pir||A30815 ribosomal protein
S14 - fruit fly (Drosophila melanogaster)
>gi|158297|gb|AAA28852.1| (M21045) ribosomal protein
RSP14A [Drosophila melanogaster]
>gi|158298|gb|AAA28853.1| (M21045) ribosomal protein
RSP14B [Drosophila melanogaster]
>gi|7290855|gb|AAF46297.1| (AE003442) RpS14a gene
product [alt 1] [Drosophila melanogaster]
>gi|7290856|gb|AAF46298.1| (AE003442) RpS14a gene
product [alt 2] [Drosophila melanogaster]
>gi|7290857|gb|AAF46299.1| (AE003442) RpS14b gene
product [Drosophila melanogaster]
Length = 151
Score = 178 bits (448), Expect = 2e-44
Identities = 82/124 (66%), Positives = 106/124 (85%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHIY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ AE+
Sbjct: 28 FGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+ +KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>sp|P19950|R141_MAIZE 40S RIBOSOMAL PROTEIN S14 (CLONE MCH1) >gi|82723|pir||A30097
ribosomal protein S14 (clone MCH1) - maize
Length = 149
Score = 178 bits (446), Expect = 3e-44
Identities = 81/124 (65%), Positives = 106/124 (85%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ A+ E
Sbjct: 26 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKE 85
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+EDVTP+P D TR KGGRR
Sbjct: 86 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 145
Query: 134 GRRV 137
GRR+
Sbjct: 146 GRRL 149
>gi|10383793 Ribosomal protein S14A (rp59A); Rps14ap [Saccharomyces cerevisiae]
Length = 137
Score = 177 bits (445), Expect = 4e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A IY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A + E
Sbjct: 14 FGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKE 73
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI VH+++RA GG+++KTPGPG QAA+RALAR+GL+IGR+EDVTP+P D TR KGGRR
Sbjct: 74 VGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133
Query: 134 GRRV 137
GRR+
Sbjct: 134 GRRL 137
>emb|CAA54769.1| (X77688) ribosomal protein rp59 [Saccharomyces cerevisiae]
Length = 138
Score = 177 bits (445), Expect = 4e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A IY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A + E
Sbjct: 15 FGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKE 74
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI VH+++RA GG+++KTPGPG QAA+RALAR+GL+IGR+EDVTP+P D TR KGGRR
Sbjct: 75 VGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 134
Query: 134 GRRV 137
GRR+
Sbjct: 135 GRRL 138
>sp|P27069|RS14_KLULA 40S RIBOSOMAL PROTEIN S14 (RP59) >gi|101138|pir||S22312 ribosomal
protein S14.e, cytosolic - yeast (Kluyveromyces
marxianus var. lactis) >gi|320169|pir||S30002 ribosomal
protein S14.e, cytosolic - yeast (Kluyveromyces
marxianus) >gi|2897|emb|CAA42520.1| (X59860) ribosomal
protein 59 [Kluyveromyces lactis]
>gi|263483|gb|AAB24899.1| (S53434) RP59 [Kluyveromyces
marxianus]
Length = 137
Score = 177 bits (445), Expect = 4e-44
Identities = 81/124 (65%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A I++S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A + E
Sbjct: 14 FGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKE 73
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI VHI++RA GG++SKTPGPG QAA+RALAR+GL+IGR+EDVTP+P D TR KGGRR
Sbjct: 74 VGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133
Query: 134 GRRV 137
GRR+
Sbjct: 134 GRRL 137
>gi|6322270 Ribosomal protein S14B (rp59B); Rps14bp [Saccharomyces cerevisiae]
>gi|730453|sp|P39516|R142_YEAST 40S RIBOSOMAL PROTEIN
S14-B (RP59B) >gi|630324|pir||S46643 ribosomal protein
S14.e.B, cytosolic - yeast (Saccharomyces cerevisiae)
>gi|295650|gb|AAA17764.1| (L12564) ribosomal protein 59
[Saccharomyces cerevisiae] >gi|1008402|emb|CAA89486.1|
(Z49466) ORF YJL191w [Saccharomyces cerevisiae]
Length = 138
Score = 177 bits (445), Expect = 4e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A IY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A + E
Sbjct: 15 FGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKE 74
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI VH+++RA GG+++KTPGPG QAA+RALAR+GL+IGR+EDVTP+P D TR KGGRR
Sbjct: 75 VGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 134
Query: 134 GRRV 137
GRR+
Sbjct: 135 GRRL 138
>sp|P06367|R141_YEAST 40S RIBOSOMAL PROTEIN S14-A (RP59A) >gi|1926400|emb|CAA42323.1|
(X59720) YCR031c, len:137 [Saccharomyces cerevisiae]
Length = 137
Score = 177 bits (445), Expect = 4e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A IY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A + E
Sbjct: 14 FGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCRE 73
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI VH+++RA GG+++KTPGPG QAA+RALAR+GL+IGR+EDVTP+P D TR KGGRR
Sbjct: 74 VGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133
Query: 134 GRRV 137
GRR+
Sbjct: 134 GRRL 137
>pir||T08441 ribosomal protein S14, cytosolic - Arabidopsis thaliana
>gi|4886269|emb|CAB43407.1| (AL050300) putative
ribosomal protein S14 [Arabidopsis thaliana]
Length = 150
Score = 177 bits (444), Expect = 5e-44
Identities = 79/127 (62%), Positives = 107/127 (84%)
Query: 11 KEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEE 70
++ +G+ H+++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ A+
Sbjct: 24 EQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQR 83
Query: 71 ALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKG 130
E GI +H+++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KG
Sbjct: 84 CKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKG 143
Query: 131 GRRGRRV 137
GRRGRR+
Sbjct: 144 GRRGRRL 150
>sp|P13471|RS14_RAT 40S RIBOSOMAL PROTEIN S14 >gi|70945|pir||R3RT14 ribosomal protein
S14, cytosolic [similarity] - rat
>gi|57129|emb|CAA33143.1| (X15040) ribosomal protein S14
(AA 1-152) [Rattus norvegicus]
Length = 151
Score = 176 bits (443), Expect = 7e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+ HI++S+N+T +H+TD++G ETI R +GGM VKADRDE SPYAAMLAA+ A+ E
Sbjct: 28 FGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKE 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+++KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>pir||R5BY59 ribosomal protein S14.e.A, cytosolic - yeast (Saccharomyces
cerevisiae) >gi|171322|gb|AAA34530.1| (M16126) small
ribosomal protein 59 [Saccharomyces cerevisiae]
Length = 137
Score = 176 bits (443), Expect = 7e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A IY+S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A + E
Sbjct: 14 FGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCRE 73
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI VH+++RA GG+++KTPGPG QAA+RALAR+GL+IGR+EDVTP+P D TR KGGRR
Sbjct: 74 VGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPCDSTRKKGGRR 133
Query: 134 GRRV 137
GRR+
Sbjct: 134 GRRL 137
>sp|P19951|R142_MAIZE 40S RIBOSOMAL PROTEIN S14 (CLONE MCH2) >gi|82724|pir||B30097
ribosomal protein S14 (clone MCH2) - maize
Length = 150
Score = 176 bits (443), Expect = 7e-44
Identities = 80/124 (64%), Positives = 106/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLA++ A+ E
Sbjct: 27 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKE 86
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+EDVTP+P D TR KGGRR
Sbjct: 87 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 146
Query: 134 GRRV 137
GRR+
Sbjct: 147 GRRL 150
>sp|P48150|RS14_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN S14 >gi|7500719|pir||T28833
hypothetical protein F37C12.9 - Caenorhabditis elegans
>gi|458981|gb|AAC48301.1| (U00033) highly similar to 40S
ribosomal protein S14 (S11P family of ribosomal
proteins) [Caenorhabditis elegans]
Length = 152
Score = 176 bits (443), Expect = 7e-44
Identities = 83/124 (66%), Positives = 106/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHI++S+N+T +HITDI+G ETI R +GGM VKADRDE SPYAAMLAA+ A+ +
Sbjct: 29 FGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADRCKQ 88
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+++KTPGPGAQ+A+RALARAG+KIGR+EDVTPIP D TR KGGRR
Sbjct: 89 LGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCTRRKGGRR 148
Query: 134 GRRV 137
GRR+
Sbjct: 149 GRRL 152
>gi|10181112 ribosomal protein S14 [Mus musculus] >gi|3097244|emb|CAA69615.1|
(Y08307) ribosomal protein S14 [Mus musculus]
Length = 151
Score = 176 bits (443), Expect = 7e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+ HI++S+N+T +H+TD++G ETI R +GGM VKADRDE SPYAAMLAA+ A+ E
Sbjct: 28 FGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKE 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+++KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>gi|5032051 ribosomal protein S14 [Homo sapiens] >gi|11526364|ref|XP_003942.1|
ribosomal protein S14 [Homo sapiens]
>gi|133776|sp|P06366|RS14_HUMAN 40S RIBOSOMAL PROTEIN
S14 (PROTEIN PRO2640) >gi|70944|pir||R4HY14 ribosomal
protein S14 - Chinese hamster >gi|88569|pir||A25220
ribosomal protein S14, cytosolic - human
>gi|304525|gb|AAA37016.1| (M11241) ribosomal protein S14
[Cricetulus griseus] >gi|337499|gb|AAB59505.1| (M13934)
ribosomal protein S14 [Homo sapiens]
>gi|387057|gb|AAA37017.1| (M35008) ribosomal protein S14
[Cricetulus griseus]
>gi|7959919|gb|AAF71130.1|AF116721_110 (AF116710)
PRO2640 [Homo sapiens]
Length = 151
Score = 176 bits (443), Expect = 7e-44
Identities = 80/124 (64%), Positives = 105/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+ HI++S+N+T +H+TD++G ETI R +GGM VKADRDE SPYAAMLAA+ A+ E
Sbjct: 28 FGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKE 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+++KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>gb|AAD26971.1|AC007135_8 (AC007135) 40S ribosomal protein S14 [Arabidopsis thaliana]
Length = 150
Score = 176 bits (443), Expect = 7e-44
Identities = 80/127 (62%), Positives = 107/127 (83%)
Query: 11 KEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEE 70
++ +G+ HI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ A+
Sbjct: 24 EQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQR 83
Query: 71 ALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKG 130
E GI +H+++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KG
Sbjct: 84 CKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKG 143
Query: 131 GRRGRRV 137
GRRGRR+
Sbjct: 144 GRRGRRL 150
>gb|AAF00665.1|AC008153_17 (AC008153) putative 40S ribosomal protein s14; 67401-66292
[Arabidopsis thaliana]
Length = 150
Score = 176 bits (443), Expect = 7e-44
Identities = 80/127 (62%), Positives = 107/127 (83%)
Query: 11 KEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEE 70
++ +G+ HI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ A+
Sbjct: 24 EQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQR 83
Query: 71 ALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKG 130
E GI +H+++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KG
Sbjct: 84 CKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKG 143
Query: 131 GRRGRRV 137
GRRGRR+
Sbjct: 144 GRRGRRL 150
>sp|Q08699|RS14_PODCA 40S RIBOSOMAL PROTEIN S14 >gi|396252|emb|CAA50506.1| (X71384) 40S
ribosomal protein S14 [Podocoryne carnea]
Length = 151
Score = 175 bits (440), Expect = 2e-43
Identities = 80/124 (64%), Positives = 106/124 (84%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+AHI++S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ A E
Sbjct: 28 FGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAVRCKE 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +H+++RA GG+++KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 IGITALHVKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>pir||JE0129 ribosomal protein S14 - mouse
Length = 151
Score = 175 bits (439), Expect = 2e-43
Identities = 80/124 (64%), Positives = 104/124 (83%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+ HI++S+N+T +H+TD +G ETI R +GGM VKADRDE SPYAAMLAA+ A+ E
Sbjct: 28 FGVCHIFASFNDTFVHVTDSSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKE 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+++KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D TR KGGRR
Sbjct: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>pir||T43939 ribosomal protein S11 [similarity] - Halobacterium salinarum
>gi|6172229|dbj|BAA85897.1| (AB030282) ribosomal protein
HS11 [Halobacterium halobium]
Length = 127
Score = 175 bits (438), Expect = 3e-43
Identities = 81/116 (69%), Positives = 100/116 (85%)
Query: 13 KWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEAL 72
KWGIAH+++S+NNTI+ +TD TGAET+++ SGG VVK +RDE SPYAAM A + AEE L
Sbjct: 6 KWGIAHVHASFNNTIMTVTDQTGAETLAKSSGGSVVKQNRDEASPYAAMQMAEQLAEEVL 65
Query: 73 EKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
++GI VH+RVR PGG+ ++PGPGAQAAIRALARAGL+IGR+EDVTPIPHDGTRP
Sbjct: 66 DQGIEKVHVRVRGPGGNLQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPHDGTRP 121
>sp|P48855|RS14_PROCL 40S RIBOSOMAL PROTEIN S14 >gi|434787|dbj|BAA03461.1| (D14609)
ribosomal protein [Procambarus clarkii]
Length = 151
Score = 173 bits (435), Expect = 6e-43
Identities = 80/124 (64%), Positives = 102/124 (81%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+ + HIY+SYN+T +H+TD++G ETI R +GG VKADRDE SPYAAMLAA+ AE+
Sbjct: 28 FAVCHIYASYNDTFVHVTDLSGRETIVRITGGQKVKADRDESSPYAAMLAAQDVAEKCKS 87
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+K+KTPGPG Q+A+RALARAG+KIGR+EDVTP+P D TR KGGRR
Sbjct: 88 LGINCLHIKIRATGGNKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDSTRRKGGRR 147
Query: 134 GRRV 137
GRR+
Sbjct: 148 GRRL 151
>sp|O22584|RS14_LUPLU 40S RIBOSOMAL PROTEIN S14 >gi|7440341|pir||T07974 ribosomal protein
S14 - yellow lupine >gi|2565340|gb|AAB81972.1|
(AF026079) ribosomal protein S14 [Lupinus luteus]
Length = 150
Score = 168 bits (422), Expect = 2e-41
Identities = 79/124 (63%), Positives = 102/124 (81%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A I++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ A E
Sbjct: 27 FGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKE 86
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+K+KTPG GAQ+A+RALAR+G+KIGR+EDVTPIP D TR K GRR
Sbjct: 87 LGITALHIKLRATGGNKTKTPGRGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRR 146
Query: 134 GRRV 137
GRR+
Sbjct: 147 GRRL 150
>sp|P10788|RS11_HALMA 30S RIBOSOMAL PROTEIN S11P (HMAS11) (HS19) >gi|322341|pir||C44126
ribosomal protein HmaS11 - Haloarcula marismortui
>gi|7428664|pir||R3HSS1 ribosomal protein S11
[validated] - Haloarcula marismortui
>gi|148772|gb|AAA73211.1| (M87833) ribosomal protein
HmaS11 [Haloarcula marismortui]
Length = 129
Score = 167 bits (419), Expect = 5e-41
Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 5/127 (3%)
Query: 1 MSEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAA 60
MSEE +I WGIAH+++S+NNTII ITD TGAET+++ SGG VVK +RDE SPYAA
Sbjct: 1 MSEETEDI-----WGIAHVHASFNNTIITITDQTGAETLAKSSGGTVVKQNRDEASPYAA 55
Query: 61 MLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTP 120
M A AE+AL++G+ GV +RVR PGG+ +PGPGAQA IRALARAGL+IGR+EDVTP
Sbjct: 56 MQMAEVVAEKALDRGVEGVDVRVRGPGGNLQTSPGPGAQATIRALARAGLEIGRIEDVTP 115
Query: 121 IPHDGTR 127
PHDGTR
Sbjct: 116 TPHDGTR 122
>gb|AAD23964.1|AF108724_1 (AF108724) ribosomal protein S14 [Tortula ruralis]
Length = 134
Score = 167 bits (419), Expect = 5e-41
Identities = 80/129 (62%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
K + +G+AHI++S+N+T +H+TD++G ET +GGM VKADRDE SPYAAMLAA+ A
Sbjct: 7 KVRAVFGVAHIFASFNDTFVHVTDLSGKETSLVLTGGMKVKADRDEASPYAAMLAAQDVA 66
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+ E GI +HI VRA GG+K+KTPGPGAQ ++RALAR+G++IGR+EDVTPIP D TR
Sbjct: 67 QRCKELGITALHINVRATGGNKTKTPGPGAQ-SLRALARSGMRIGRIEDVTPIPTDSTRR 125
Query: 129 KGGRRGRRV 137
KGGRRGRR+
Sbjct: 126 KGGRRGRRL 134
>pir||S11667 ribosomal protein S14.e - Neurospora crassa
Length = 150
Score = 166 bits (415), Expect = 1e-40
Identities = 76/124 (61%), Positives = 100/124 (80%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+A I++S+N+T +H+TD++G ET R GG+ VKADRDE SPYAAMLAA+ A E
Sbjct: 27 FGVARIFASFNDTFVHVTDLSGRETTDRVIGGIKVKADRDESSPYAAMLAAQDVAARCKE 86
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +HI++RA GG+ ++TPGPGAQ+A+RALAR+G+KIGR+EDVTP P D TR KGGRR
Sbjct: 87 LGITALHIKIRATGGNGTRTPGPGAQSALRALARSGMKIGRIEDVTPTPSDSTRRKGGRR 146
Query: 134 GRRV 137
GRR+
Sbjct: 147 GRRL 150
>sp|P19800|RS14_TRYBB 40S RIBOSOMAL PROTEIN S14 >gi|84052|pir||A36335 ribosomal protein
S14 - Trypanosoma brucei brucei (strain 427)
>gi|162240|gb|AAA30237.1| (M36124) ribosomal protein S14
[Trypanosoma brucei]
Length = 144
Score = 165 bits (413), Expect = 2e-40
Identities = 75/124 (60%), Positives = 99/124 (79%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G+ HIY+S+N+T +H+TD++G ET + +GGM VKADRDE SPYAAM+AA+ E
Sbjct: 21 YGVVHIYASFNDTFVHVTDMSGRETFCKVTGGMKVKADRDESSPYAAMMAAQDVVARCKE 80
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI +H+++RA GG +K+PGPGAQAA+RALARAG+KIGR+EDVTP+P D TR KG RR
Sbjct: 81 CGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIGRIEDVTPVPTDSTRRKGSRR 140
Query: 134 GRRV 137
GRR+
Sbjct: 141 GRRL 144
>sp|P19115|RS14_NEUCR 40S RIBOSOMAL PROTEIN S14 (CRP2) >gi|2995|emb|CAA37766.1| (X53734)
ribosomal protein crp-2 [Neurospora crassa]
Length = 152
Score = 161 bits (402), Expect = 4e-39
Identities = 76/126 (60%), Positives = 100/126 (79%), Gaps = 2/126 (1%)
Query: 14 WGIAHIYSSYNNTIIHITDIT--GAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEA 71
+G+A I++S+N+T +H+TD++ G ET R GG+ VKADRDE SPYAAMLAA+ A
Sbjct: 27 FGVARIFASFNDTFVHVTDLSSSGRETTDRVIGGIKVKADRDESSPYAAMLAAQDVAARC 86
Query: 72 LEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGG 131
E GI +HI++RA GG+ ++TPGPGAQ+A+RALAR+G+KIGR+EDVTP P D TR KGG
Sbjct: 87 KELGITALHIKIRATGGNGTRTPGPGAQSALRALARSGMKIGRIEDVTPTPSDSTRRKGG 146
Query: 132 RRGRRV 137
RRGRR+
Sbjct: 147 RRGRRL 152
>dbj|BAA22022.1| (AB002784) ribosomal protein S14 [Entamoeba histolytica]
Length = 140
Score = 155 bits (389), Expect = 1e-37
Identities = 73/124 (58%), Positives = 96/124 (76%)
Query: 11 KEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEE 70
K+ +G+AHIY+++N+T +H+TDI+G ETI R +GGM VKADRDE SPYAAM AA+ A+
Sbjct: 17 KDAFGVAHIYATFNDTFVHVTDISGKETIIRITGGMRVKADRDESSPYAAMTAAQDVAKR 76
Query: 71 ALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKG 130
+ G+ +HI++R GG SKTPG GAQAA+RALARA +KIGR+EDVTPIP D T+ +
Sbjct: 77 CKDLGVTSLHIKMRGEGGVYSKTPGTGAQAALRALARANMKIGRIEDVTPIPTDWTKRRE 136
Query: 131 GRRG 134
G G
Sbjct: 137 GEAG 140
>prf||1501255B ribosomal protein S19 [Haloarcula marismortui]
Length = 129
Score = 154 bits (386), Expect = 3e-37
Identities = 76/114 (66%), Positives = 94/114 (81%), Gaps = 1/114 (0%)
Query: 15 GIAHIYSSYNNTIIHITDITGA-ETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
GIAH+++S+NNTII ITD TGA ET+++ SGG VVK +RDE SPYAAM A AE+AL+
Sbjct: 9 GIAHVHASFNNTIITITDQTGAQETLAKSSGGTVVKQNRDEASPYAAMQMAEVVAEKALD 68
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
+G+ GV +RVR PGG+ +PGPGAQA IRALARAGL+IGR+EDVTP PH+GTR
Sbjct: 69 RGVEGVDVRVRGPGGNLQTSPGPGAQATIRALARAGLEIGRIEDVTPTPHNGTR 122
>gb|AAG19519.1| (AE005043) 30S ribosomal protein S11P; Rps11p [Halobacterium sp.
NRC-1]
Length = 107
Score = 147 bits (367), Expect = 6e-35
Identities = 70/99 (70%), Positives = 84/99 (84%)
Query: 30 ITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGS 89
+TD TGAET+++ SGG VVK +RDE SPYAAM A + AEE L++GI VH+RVR PGG+
Sbjct: 3 VTDQTGAETLAKSSGGSVVKQNRDEASPYAAMQMAEQLAEEVLDQGIEKVHVRVRGPGGN 62
Query: 90 KSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
++PGPGAQAAIRALARAGL+IGR+EDVTPIPHDGTRP
Sbjct: 63 LQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPHDGTRP 101
>sp|P42036|RS14_ARATH 40S RIBOSOMAL PROTEIN S14
Length = 84
Score = 122 bits (303), Expect = 2e-27
Identities = 56/84 (66%), Positives = 70/84 (82%)
Query: 54 EPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIG 113
E SPYAAMLAA+ A+ E GI +H+++RA GG+K+KTPGPGAQ+ +RALAR+G+KIG
Sbjct: 1 ESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSTLRALARSGMKIG 60
Query: 114 RVEDVTPIPHDGTRPKGGRRGRRV 137
R+EDVTPIP D TR KGGRRGRR+
Sbjct: 61 RIEDVTPIPTDSTRRKGGRRGRRL 84
>emb|CAB46816.1| (AJ388514) Ribosomal protein S14 [Canis familiaris]
Length = 79
Score = 114 bits (282), Expect = 5e-25
Identities = 53/79 (67%), Positives = 67/79 (84%)
Query: 59 AAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDV 118
AAMLAA+ A+ E GI +HI++RA GG+++KTPGPGAQ+A+RALAR+G+KIGR+EDV
Sbjct: 1 AAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDV 60
Query: 119 TPIPHDGTRPKGGRRGRRV 137
TPIP D TR KGGRRGRR+
Sbjct: 61 TPIPSDSTRRKGGRRGRRL 79
>sp|P93377|RS14_TOBAC 40S RIBOSOMAL PROTEIN S14 >gi|1762931|gb|AAC49968.1| (U66262)
ribosomal protein S14 [Nicotiana tabacum]
Length = 66
Score = 100 bits (246), Expect = 9e-21
Identities = 46/65 (70%), Positives = 57/65 (86%)
Query: 73 EKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGR 132
E GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+EDVTPIP D T KGGR
Sbjct: 2 ELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTPRKGGR 61
Query: 133 RGRRV 137
RGRR+
Sbjct: 62 RGRRL 66
>sp|P10789|RS11_BACST 30S RIBOSOMAL PROTEIN S11 (BS11) >gi|70939|pir||R3BS11 ribosomal
protein S11 [validated] - Bacillus stearothermophilus
>gi|226202|prf||1501255A ribosomal protein S11 [Bacillus
stearothermophilus]
Length = 128
Score = 99.1 bits (243), Expect = 2e-20
Identities = 55/126 (43%), Positives = 77/126 (60%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
++K GIAHI S++NNTI+ ITD+ G +G + K R + +P+AA +AA A
Sbjct: 11 VRKNIDTGIAHIRSTFNNTIVTITDVHGNALAWASAGSLGFKGSR-KSTPFAAQMAAEAA 69
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
A+ ++E G+ V + V+ PG G +AAIRAL AGL+I ++DVTPIPHDG R
Sbjct: 70 AKASMEHGMKTVEVNVKGPGA--------GREAAIRALQAAGLEITAIKDVTPIPHDGCR 121
Query: 128 PKGGRR 133
P RR
Sbjct: 122 PPKRRR 127
>pir||F83113 30S ribosomal protein S11 PA4240 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950457|gb|AAG07628.1|AE004841_6 (AE004841) 30S
ribosomal protein S11 [Pseudomonas aeruginosa]
Length = 129
Score = 99.1 bits (243), Expect = 2e-20
Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK GIAHI++S+NNTI+ ITD G SGG + R + +P+AA +AA RA
Sbjct: 12 VKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERA 70
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
+ ALE G+ + + V K PGPG ++A+RAL G KI + DVTPIPH+G R
Sbjct: 71 GQAALEYGLKNLDVNV--------KGPGPGRESAVRALNACGYKIASITDVTPIPHNGCR 122
Query: 128 PKGGRR 133
P RR
Sbjct: 123 PPKKRR 128
>sp|Q9X1I4|RS11_THEMA 30S RIBOSOMAL PROTEIN S11 >gi|7440338|pir||C72247 ribosomal protein
S11 - Thermotoga maritima (strain MSB8)
>gi|4982040|gb|AAD36542.1|AE001798_7 (AE001798)
ribosomal protein S11 [Thermotoga maritima]
Length = 130
Score = 98.7 bits (242), Expect = 3e-20
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 14/138 (10%)
Query: 1 MSEEQVNIKKKEK-----WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEP 55
M+ ++ KK+K +G+ HI S++NNTII +TD G T++ SGG V +
Sbjct: 1 MARKRGGSSKKQKKVSFDYGVVHIKSTFNNTIITLTDKDG-NTLTWASGGTVGFEGTRKG 59
Query: 56 SPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRV 115
+PYAA LAA + A EAL GI V + V K PGPG + AIR L AGL+I ++
Sbjct: 60 TPYAAQLAADKVAREALRMGIKKVDVLV--------KGPGPGREPAIRTLQGAGLEINQI 111
Query: 116 EDVTPIPHDGTRPKGGRR 133
+DVTPIP +G RPK RR
Sbjct: 112 KDVTPIPFNGCRPKKRRR 129
>sp|O66485|RS11_AQUAE 30S RIBOSOMAL PROTEIN S11 >gi|7440316|pir||B70307 ribosomal protein
S11 - Aquifex aeolicus >gi|2982821|gb|AAC06444.1|
(AE000672) ribosomal protein S11 [Aquifex aeolicus]
Length = 125
Score = 97.5 bits (239), Expect = 6e-20
Identities = 53/133 (39%), Positives = 83/133 (61%), Gaps = 9/133 (6%)
Query: 1 MSEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAA 60
M++++ K++ I HI++++NNTI+++TD G TI+ SGG V + +PYAA
Sbjct: 1 MAKKKKKQKRQVTKAIVHIHTTFNNTIVNVTDTQG-NTIAWASGGTVGFKGTRKSTPYAA 59
Query: 61 MLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTP 120
LAA++A +EA E G+ V I V+ PG G ++A+RA+ +G+K+ + DVTP
Sbjct: 60 QLAAQKAMKEAKEHGVQEVEIWVKGPGA--------GRESAVRAVFASGVKVTAIRDVTP 111
Query: 121 IPHDGTRPKGGRR 133
IPH+G RP RR
Sbjct: 112 IPHNGCRPPARRR 124
>sp|P57568|RS11_BUCAI 30S RIBOSOMAL PROTEIN S11 >gi|10039160|dbj|BAB13194.1| (AP001119)
30S ribosomal protein S11 [Buchnera sp. APS]
Length = 131
Score = 94.0 bits (230), Expect = 7e-19
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK+ GIAHI++S+NNTI+ ITD G SGG + R + +P+AA +AA R
Sbjct: 14 VKKQILDGIAHIHASFNNTIVTITDRQGNALGWATSGGSGFRGSR-KSTPFAAQVAAERC 72
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
AE + GI + + V K PGPG ++ IRAL AG +I + DVTPIPH+G R
Sbjct: 73 AEIVKDYGIKNLEVMV--------KGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCR 124
Query: 128 PKGGRR 133
P RR
Sbjct: 125 PPKKRR 130
>sp|P04969|RS11_BACSU 30S RIBOSOMAL PROTEIN S11 (BS11) >gi|70938|pir||R3BSS1 ribosomal
protein S11 - Bacillus subtilis
>gi|142462|gb|AAA22216.1| (M26414) ribosomal protein S11
[Bacillus subtilis] >gi|143451|gb|AAA22707.1| (M13957)
ribosomal protein S11 [Bacillus subtilis]
>gi|1044990|gb|AAB06825.1| (L47971) ribosomal protein
S11 [Bacillus subtilis] >gi|2632409|emb|CAB11918.1|
(Z99104) ribosomal protein S11 (BS11) [Bacillus
subtilis]
Length = 131
Score = 93.6 bits (229), Expect = 9e-19
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK + GIAHI S++NNTI+ ITD G IS S G + + +P+AA +AA A
Sbjct: 14 VKKNIESGIAHIRSTFNNTIVTITDTHG-NAISWSSAGALGFRGSRKSTPFAAQMAAETA 72
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
A+ ++E G+ + + V+ PG G +AAIRAL AGL++ + DVTP+PH+G R
Sbjct: 73 AKGSIEHGLKTLEVTVKGPGS--------GREAAIRALQAAGLEVTAIRDVTPVPHNGCR 124
Query: 128 PKGGRR 133
P RR
Sbjct: 125 PPKRRR 130
>sp|P02366|RS11_ECOLI 30S RIBOSOMAL PROTEIN S11 >gi|70937|pir||R3EC11 ribosomal protein
S11 [validated] - Escherichia coli
>gi|42797|emb|CAA26393.1| (X02543) ribosomal protein S11
(aa 1-129) [Escherichia coli] >gi|606232|gb|AAA58095.1|
(U18997) 30S ribosomal subunit protein S11 [Escherichia
coli] >gi|1789692|gb|AAC76322.1| (AE000407) 30S
ribosomal subunit protein S11 [Escherichia coli K12]
Length = 129
Score = 93.2 bits (228), Expect = 1e-18
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
++K+ G+AHI++S+NNTI+ ITD G +GG + R + +P+AA +AA R
Sbjct: 12 VRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSR-KSTPFAAQVAAERC 70
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
A+ E GI + + V K PGPG ++ IRAL AG +I + DVTPIPH+G R
Sbjct: 71 ADAVKEYGIKNLEVMV--------KGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCR 122
Query: 128 PKGGRR 133
P RR
Sbjct: 123 PPKKRR 128
>pir||F81229 30S ribosomal protein S11 NMB0166 [imported] - Neisseria
meningitidis (group B strain MD58, group A strain Z2491)
>gi|7225384|gb|AAF40623.1| (AE002374) 30S ribosomal
protein S11 [Neisseria meningitidis MC58]
>gi|7378877|emb|CAB83420.1| (AL162752) 30S ribosomal
protein S11 [Neisseria meningitidis Z2491]
Length = 131
Score = 93.2 bits (228), Expect = 1e-18
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 2 SEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAM 61
S + ++K GI H+++S+NNTII ITD G SGG K R + +P+AA
Sbjct: 8 SRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSR-KSTPFAAQ 66
Query: 62 LAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPI 121
+AA A + A E G+ + +R+ K PGPG ++++RAL G KI + DVTP+
Sbjct: 67 VAAEAAGKVAQEYGVKNLEVRI--------KGPGPGRESSVRALNALGFKITSITDVTPL 118
Query: 122 PHDGTRPKGGRR 133
PH+G RP RR
Sbjct: 119 PHNGCRPPKKRR 130
>pir||C82061 ribosomal protein S11 VC2573 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9657159|gb|AAF95714.1| (AE004325)
ribosomal protein S11 [Vibrio cholerae]
Length = 129
Score = 93.2 bits (228), Expect = 1e-18
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
++K+ G+AHI++S+NNTI+ ITD G +GG + R + +P+AA +AA R
Sbjct: 12 VRKQVADGVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSR-KSTPFAAQVAAERC 70
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
AE A E G+ + + V K PGPG ++ +RAL AG +I + D TPIPH+G R
Sbjct: 71 AEMAKEYGLKNLEVMV--------KGPGPGRESTVRALNAAGFRITNIVDATPIPHNGCR 122
Query: 128 PKGGRR 133
P RR
Sbjct: 123 PPKKRR 128
>sp|Q9Z3E9|RS11_XANCP 30S RIBOSOMAL PROTEIN S11 >gi|4098575|gb|AAD00323.1| (U79735)
ribosomal protein S11 [Xanthomonas campestris pv.
campestris]
Length = 130
Score = 92.8 bits (227), Expect = 1e-18
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
IK+ G+AH+++S+NNTI+ ITD G SGG + R + +P+AA +AA +A
Sbjct: 13 IKRVITDGVAHVHASFNNTIVTITDRQGNALSWATSGGAGFRGSR-KSTPFAAQVAAEKA 71
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
L+ G+ + +R+ K PGPG ++A+R+L G KI + DVTPIPH+G R
Sbjct: 72 GRAGLDYGVKSLEVRI--------KGPGPGRESAVRSLNNVGYKITNIIDVTPIPHNGCR 123
Query: 128 PKGGRR 133
P RR
Sbjct: 124 PPKKRR 129
>sp|O50633|RS11_BACHD 30S RIBOSOMAL PROTEIN S11 >gi|11276589|pir||T44409 ribosomal
protein S11 [imported] - Bacillus halodurans
>gi|2760184|dbj|BAA24193.1| (AB010082) ribosomal protein
S11 [Bacillus halodurans] >gi|4512430|dbj|BAA75297.1|
(AB017508) rpsK homologue (identity of 82% to B.
subtilis ) [Bacillus halodurans]
>gi|10172773|dbj|BAB03880.1| (AP001507) ribosomal
protein S11 (BS11) [Bacillus halodurans]
Length = 129
Score = 92.4 bits (226), Expect = 2e-18
Identities = 49/125 (39%), Positives = 75/125 (59%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
+K + G+AHI S++NNTI+ ITD G +G + K R + +P+AA +AA AA
Sbjct: 13 RKNVETGVAHIRSTFNNTIVTITDPHGNAISWASAGALGFKGSR-KSTPFAAQMAAETAA 71
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+ A+E G+ + + V+ PG G +AAIR+L GL++ ++DVTP+PH+G RP
Sbjct: 72 KAAMEHGMKSIEVSVKGPGA--------GREAAIRSLQAVGLEVNMIKDVTPVPHNGCRP 123
Query: 129 KGGRR 133
RR
Sbjct: 124 PKRRR 128
>sp|P44379|RS11_HAEIN 30S RIBOSOMAL PROTEIN S11 >gi|1075261|pir||I64094 ribosomal protein
S11 - Haemophilus influenzae (strain Rd KW20)
>gi|1573811|gb|AAC22459.1| (U32762) ribosomal protein
S11 (rpS11) [Haemophilus influenzae Rd]
Length = 129
Score = 92.1 bits (225), Expect = 3e-18
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK+ G+ HI++S+NNTI+ ITD G +GG + R + +P+AA +AA R
Sbjct: 12 VKKQVVDGVRHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSR-KSTPFAAQVAAERC 70
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
AE E G+ + + V K PGPG ++ IRAL AG +I + DVTPIPH+G R
Sbjct: 71 AEIVKEFGLKNLEVMV--------KGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCR 122
Query: 128 PKGGRR 133
P RR
Sbjct: 123 PPKKRR 128
>sp|P73298|RS11_SYNY3 30S RIBOSOMAL PROTEIN S11 >gi|7440315|pir||S77479 ribosomal protein
S11 - Synechocystis sp. (strain PCC 6803)
>gi|1652404|dbj|BAA17326.1| (D90905) 30S ribosomal
protein S11 [Synechocystis sp.]
Length = 130
Score = 90.9 bits (222), Expect = 6e-18
Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK G+AHI S++NNTI+ I+DI G + IS S G + +PYAA AA AA
Sbjct: 14 KKNVPSGVAHIQSTFNNTIVTISDIRG-DVISWASAGSSGFKGAKKGTPYAAQTAADSAA 72
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
A+E+G+ + + V PG G + AIRAL AGL+I + DVTPIPH+G RP
Sbjct: 73 RRAMEQGMRQLEVMVSGPGA--------GRETAIRALQGAGLEITLIRDVTPIPHNGCRP 124
Query: 129 KGGRR 133
RR
Sbjct: 125 PKRRR 129
>dbj|BAA84523.1| (AB032408) ribosomal protein S11 [Shewanella violacea]
Length = 135
Score = 90.9 bits (222), Expect = 6e-18
Identities = 52/121 (42%), Positives = 72/121 (58%), Gaps = 9/121 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
++K+ G+AHI++S+NNTII ITD G SGG + R + +P+AA +AA RA
Sbjct: 13 VRKQVADGMAHIHASFNNTIITITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERA 71
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
A + G+ + + V K PGPG ++AIRAL G KI + DVTPIPH+G R
Sbjct: 72 GVAAQDYGVKNLEVFV--------KGPGPGRESAIRALNSVGYKITNITDVTPIPHNGCR 123
Query: 128 P 128
P
Sbjct: 124 P 124
>sp|P72403|RS11_STRCO 30S RIBOSOMAL PROTEIN S11 >gi|7481750|pir||T35557 ribosomal protein
S11 - Streptomyces coelicolor
>gi|3449240|emb|CAA20384.1| (AL031317) 30S ribosomal
protein S11 [Streptomyces coelicolor A3(2)]
Length = 134
Score = 90.1 bits (220), Expect = 1e-17
Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK G AHI S++NNTI+ ITD TG IS S G V + +P+AA +AA AA
Sbjct: 18 KKNVAHGHAHIKSTFNNTIVSITDPTG-NVISWASAGHVGFKGSRKSTPFAAQMAAESAA 76
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
A E G+ V + V+ PG G + AIR+L GL++G ++DVTP PH+G RP
Sbjct: 77 RRAQEHGMRKVDVFVKGPGS--------GRETAIRSLQATGLEVGSIQDVTPTPHNGCRP 128
Query: 129 KGGRR 133
RR
Sbjct: 129 PKRRR 133
>sp|Q9X7A0|RS11_MYCLE 30S RIBOSOMAL PROTEIN S11 >gi|4539114|emb|CAB39835.1| (AL049491)
putative 30S ribosomal protein S11 [Mycobacterium
leprae]
Length = 138
Score = 90.1 bits (220), Expect = 1e-17
Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK +G AHI S++NNTI+ ITD G SG + K R + +P+AA LAA AA
Sbjct: 22 KKNIPYGAAHIKSTFNNTIVTITDQQGNVIAWASSGHVGFKGSR-KSTPFAAQLAAENAA 80
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+A E G+ V + V PG G + AIR+L AGL++G + DVTP PH+G RP
Sbjct: 81 RKAQEHGVRKVDVFVMGPGS--------GRETAIRSLQAAGLEVGAISDVTPQPHNGCRP 132
Query: 129 KGGRR 133
RR
Sbjct: 133 PKRRR 137
>pir||G82714 30S ribosomal protein S11 XF1174 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106140|gb|AAF83984.1|AE003951_9
(AE003951) 30S ribosomal protein S11 [Xylella
fastidiosa]
Length = 130
Score = 89.7 bits (219), Expect = 1e-17
Identities = 53/132 (40%), Positives = 74/132 (55%), Gaps = 13/132 (9%)
Query: 6 VNIKKKEKW----GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAM 61
V IKKK K G+AHI +S+NNTI+ ITD G SG + R + +P+AA
Sbjct: 7 VKIKKKVKRVITDGVAHISASFNNTIVTITDRQGNSLFWCTSGASGFRGSR-KCTPFAAQ 65
Query: 62 LAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPI 121
+AA +A L+ G+ + +R+ PG PG ++A+R+L G KI + DVTPI
Sbjct: 66 VAAEKAGRAVLDYGMKSLEVRINGPG--------PGRESAVRSLNNVGYKITNIIDVTPI 117
Query: 122 PHDGTRPKGGRR 133
PH+G RP RR
Sbjct: 118 PHNGCRPPKKRR 129
>sp|O06326|RS11_MYCTU 30S RIBOSOMAL PROTEIN S11 >gi|7440320|pir||H70565 probable
ribosomal protein S11 - Mycobacterium tuberculosis
(strain H37RV) >gi|2104382|emb|CAB08725.1| (Z95390) rpsK
[Mycobacterium tuberculosis]
Length = 139
Score = 89.3 bits (218), Expect = 2e-17
Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK G AHI S++NNTI+ ITD G SG + K R + +P+AA LAA AA
Sbjct: 23 KKNVPHGAAHIKSTFNNTIVTITDPQGNVIAWASSGHVGFKGSR-KSTPFAAQLAAENAA 81
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+A + G+ V + V+ PG G + AIR+L AGL++G + DVTP PH+G RP
Sbjct: 82 RKAQDHGVRKVDVFVKGPGS--------GRETAIRSLQAAGLEVGAISDVTPQPHNGVRP 133
Query: 129 KGGRR 133
RR
Sbjct: 134 PKRRR 138
>gi|11465760 30S ribosomal protein S11 [Porphyra purpurea]
>gi|1710690|sp|P51294|RR11_PORPU CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|2147024|pir||S73215 ribosomal
protein S11, chloroplast - red alga (Porphyra purpurea)
chloroplast >gi|1276760|gb|AAC08180.1| (U38804) 30S
ribosomal protein S11 [Porphyra purpurea]
Length = 130
Score = 88.9 bits (217), Expect = 2e-17
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
GI HI S++NNTI+ IT++ G ET+S S G + +P+AA AA +AA++A+++
Sbjct: 20 GITHIKSTFNNTIVTITNLKG-ETLSWSSSGASGFKGAKKGTPFAAQTAAEKAAKQAMDQ 78
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ + V PG G + AIRAL AGL+I ++D+TP+PH+G RP RR
Sbjct: 79 GMRQTEVLVNGPGA--------GRETAIRALQAAGLEITLIKDITPVPHNGCRPPKKRR 129
>gi|11467450 30S ribosomal protein S11 [Odontella sinensis]
>gi|1350867|sp|P49499|RR11_ODOSI CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|7440321|pir||S78255 ribosomal
protein S11, chloroplast - Odontella sinensis
chloroplast >gi|1185145|emb|CAA91628.1| (Z67753) 30S
ribosomal protein S11 [Odontella sinensis]
Length = 130
Score = 88.2 bits (215), Expect = 4e-17
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ HI S++NNTI+ IT+ITG +TIS S G + +P+AA AA +AA +AL K
Sbjct: 20 GVVHIQSTFNNTIVTITNITG-DTISWASAGSSGFKGARKGTPFAAQTAAEKAALDALSK 78
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ V + V+ G G + AIR++ AG ++ ++D+TP+PH+G RP RR
Sbjct: 79 GMKSVEVLVKGQGS--------GRETAIRSIEGAGFEVTSIQDITPVPHNGCRPPKRRR 129
>sp|O24709|RS11_SYNP6 30S RIBOSOMAL PROTEIN S11 >gi|2446912|dbj|BAA22471.1| (AB000111)
30S ribosomal protein S11 [Synechococcus sp.]
Length = 130
Score = 87.0 bits (212), Expect = 8e-17
Identities = 52/125 (41%), Positives = 70/125 (55%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
K+ G+AHI S++NNTI+ I D G E IS S G + +P+AA AA AA
Sbjct: 14 KRNVPSGVAHIQSTFNNTIVSIADPAG-EVISWASAGSSGFKGAKKGTPFAAQTAAEAAA 72
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
A+++G+ + + V PG G + AIRAL AGL+I + DVTPIPH+G RP
Sbjct: 73 RRAIDQGMRQLEVMVSGPGS--------GRETAIRALQSAGLEITLIRDVTPIPHNGCRP 124
Query: 129 KGGRR 133
RR
Sbjct: 125 PKRRR 129
>sp|Q9XD11|RS11_LEPIN 30S RIBOSOMAL PROTEIN S11 >gi|5163229|gb|AAD40608.1|AF115283_27
(AF115283) ribosomal protein S11 [Leptospira
interrogans]
Length = 136
Score = 86.6 bits (211), Expect = 1e-16
Identities = 54/136 (39%), Positives = 81/136 (58%), Gaps = 14/136 (10%)
Query: 3 EEQVNIKKKEKW----GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPY 58
+++ +KKKEK G +I +S+NNTI+ ITD+ G TIS + G + + +PY
Sbjct: 9 KKEKKVKKKEKKIVPRGKVYITASFNNTIVTITDMAG-NTISWSTSGAMGFRGSKKSTPY 67
Query: 59 AAMLAARRAAEEALEK-GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVED 117
AA +AA AAE+A++ G+ V + V PG G ++AIR+L GL I ++D
Sbjct: 68 AAQIAAGNAAEKAMDSAGLQEVDVMVSGPG--------IGRESAIRSLVARGLNIKMIKD 119
Query: 118 VTPIPHDGTRPKGGRR 133
VTP+PH+G RP+ RR
Sbjct: 120 VTPLPHNGCRPRKRRR 135
>sp|P45812|RS11_MYCBO 30S RIBOSOMAL PROTEIN S11
Length = 139
Score = 86.2 bits (210), Expect = 1e-16
Identities = 51/125 (40%), Positives = 70/125 (55%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK G AHI S++NNTI+ ITD G SG +V K R + +P+AA LAA A
Sbjct: 23 KKNVPHGAAHIKSTFNNTIVTITDPQGNVIGWASSGHVVFKGSR-KSTPFAAQLAAENPA 81
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+A + G+ V + V+ PG G + IR++ AGL++G + DVTP PH+G RP
Sbjct: 82 RKAQDHGVRKVDVFVKGPGS--------GRETPIRSVQAAGLEVGAISDVTPHPHNGVRP 133
Query: 129 KGGRR 133
RR
Sbjct: 134 PXHRR 138
>gi|11467400 ribosomal protein S11 [Cyanophora paradoxa]
>gi|1350866|sp|P48136|RR11_CYAPA CYANELLE 30S RIBOSOMAL
PROTEIN S11 >gi|7440336|pir||T06945 ribosomal protein
S11 - Cyanophora paradoxa cyanelle
>gi|1016201|gb|AAA81288.1| (U30821) ribosomal protein
S11 [Cyanophora paradoxa]
Length = 130
Score = 85.8 bits (209), Expect = 2e-16
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK G+AHI S++NNTII IT TG E I+ S G + +P+AA AA +A
Sbjct: 14 KKNIPVGVAHIQSTFNNTIISITSPTG-EVIAWASAGSSGFKGARKGTPFAAQTAAENSA 72
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+A+E+G+ + + + PG G + AI+AL GL+I + D+TP+PH+G RP
Sbjct: 73 RQAMEQGMRQIEVIISGPGS--------GREMAIKALQATGLEISLIRDITPVPHNGCRP 124
Query: 129 KGGRR 133
RR
Sbjct: 125 PKRRR 129
>pir||JE0400 ribosomal protein S11 - Thermus aquaticus >gi|10835573|pdb|1FJF|K
Chain K, Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit >gi|10835595|pdb|1FJG|K Chain K,
Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin And Paromomycin
>gi|4519421|dbj|BAA75547.1| (AB024328) ribosomal protein
S11 [Thermus thermophilus]
Length = 129
Score = 85.0 bits (207), Expect = 3e-16
Identities = 50/122 (40%), Positives = 74/122 (59%), Gaps = 9/122 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+K++ G A+I++SYNNTI+ ITD G I+ SGG++ + +PYAA LAA A
Sbjct: 10 VKRQVASGRAYIHASYNNTIVTITDPDG-NPITWSSGGVIGYKGSRKGTPYAAQLAALDA 68
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
A++A+ G+ V + VR G G + AIRAL +GL++ + D TP+PH+G R
Sbjct: 69 AKKAMAYGMQSVDVIVRGTGA--------GREQAIRALQASGLQVKSIVDDTPVPHNGCR 120
Query: 128 PK 129
PK
Sbjct: 121 PK 122
>gi|11466358 ribosomal protein S11 [Mesostigma viride]
>gi|7259501|gb|AAF43802.1|AF166114_14 (AF166114)
ribosomal protein S11 [Mesostigma viride]
Length = 130
Score = 84.7 bits (206), Expect = 4e-16
Identities = 47/125 (37%), Positives = 69/125 (54%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
K+K G+ H+ +++NNTI+ ITD+ G E +S S G + +P+AA AA A
Sbjct: 14 KRKIPKGVVHVQATFNNTIVTITDVRG-EVLSWSSAGACGFKGTKKGTPFAAQTAAENAV 72
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+ +++G+ I + PG G + AIRA+ AGL I + DVTPIPH+G RP
Sbjct: 73 RQVIDQGMKQAEIMISGPGS--------GRETAIRAIQAAGLGITLIRDVTPIPHNGCRP 124
Query: 129 KGGRR 133
RR
Sbjct: 125 PKKRR 129
>gi|11467737 ribosomal protein S11 [Guillardia theta]
>gi|3914831|sp|O46913|RR11_GUITH CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|3603062|gb|AAC35723.1|
(AF041468) ribosomal protein S11 [Guillardia theta]
Length = 130
Score = 84.3 bits (205), Expect = 6e-16
Identities = 43/120 (35%), Positives = 71/120 (58%), Gaps = 9/120 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KK G+ HI S++NNTI+ ++ + G +T++ S G + + +P+AA +AA +A
Sbjct: 14 KKVAANGVVHIQSTFNNTIVTLSTLEG-DTVAWASSGAIGFKGAKKGTPFAAQIAAEKAT 72
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
+EA+ +G+ + + PG G + AIRAL AGL+I + D+TP+PH+G RP
Sbjct: 73 KEAISQGMKKAEVLINGPGS--------GRETAIRALQAAGLEITLIRDITPVPHNGCRP 124
>gi|11466736 rps11 [Marchantia polymorpha] >gi|133725|sp|P06364|RR11_MARPO
CHLOROPLAST 30S RIBOSOMAL PROTEIN S11
>gi|70940|pir||R3LV11 ribosomal protein S11, chloroplast
- liverwort (Marchantia polymorpha) chloroplast
>gi|11707|emb|CAA28118.1| (X04465) rps11 [Marchantia
polymorpha]
Length = 130
Score = 82.7 bits (201), Expect = 2e-15
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 2 SEEQVNIKKKEKW---GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPY 58
S +++N++K ++ G+ HI +S+NNTI+ +TDI G + +S S G + +P+
Sbjct: 4 SVKKINLRKGKRRLPKGVIHIQASFNNTIVTVTDIRG-QVVSWSSAGACGFKGTKKSTPF 62
Query: 59 AAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDV 118
AA AA A +++G+ + + PG PG A+RA+ R+G+ + V DV
Sbjct: 63 AAQTAAENAIRILIDQGMKQAEVMISGPG--------PGRDTALRAIRRSGIILSFVRDV 114
Query: 119 TPIPHDGTRPKGGRR 133
TP+PH+G RP RR
Sbjct: 115 TPMPHNGCRPPRKRR 129
>gb|AAF19040.1| (L08896) 30S ribosomal protein S11 [Mycoplasma gallisepticum]
Length = 121
Score = 82.7 bits (201), Expect = 2e-15
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
GIAHI+++ NN+II ITDI G I+ S G + + +PY++ +AA +AA+EA+
Sbjct: 12 GIAHIHATSNNSIITITDING-NAITWSSSGAIGYKGAKKKTPYSSGVAAEKAAKEAMAM 70
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
G+ + I V G K + AIR+LA GL I + DVTPIPH+G RP
Sbjct: 71 GLSTIKIYVNGVGRGK--------ETAIRSLAACGLTITEIHDVTPIPHNGCRP 116
>sp|O51454|RS11_BORBU 30S RIBOSOMAL PROTEIN S11 >gi|7440324|pir||D70162 ribosomal protein
S11 (rpsK) - Lyme disease spirochete
>gi|2688390|gb|AAC66841.1| (AE001152) ribosomal protein
S11 (rpsK) [Borrelia burgdorferi]
Length = 134
Score = 82.3 bits (200), Expect = 2e-15
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 7 NIKKKEKWGIA----HIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAML 62
N KKK K I +I +++NNTI+ ++DI G +GGM K + + +PYAA +
Sbjct: 12 NSKKKIKRNIGEGNVYIQATFNNTIVTVSDIKGNALAWASAGGMGFKGAK-KSTPYAAQI 70
Query: 63 AARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIP 122
A A + + GI VH+ + K PG G ++AIRA+ G+ + + D+TPIP
Sbjct: 71 TAESALNKVRDFGINYVHVYI--------KGPGIGRESAIRAIGSIGMTVKSISDITPIP 122
Query: 123 HDGTRPKGGRR 133
H+G RPK RR
Sbjct: 123 HNGCRPKKTRR 133
>gi|7525066 ribosomal protein S11 [Arabidopsis thaliana]
>gi|6685906|sp|P56802|RR11_ARATH CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|5881727|dbj|BAA84418.1|
(AP000423) ribosomal protein S11 [Arabidopsis thaliana]
Length = 138
Score = 81.1 bits (197), Expect = 5e-15
Identities = 47/132 (35%), Positives = 73/132 (54%), Gaps = 10/132 (7%)
Query: 2 SEEQVNIKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAM 61
S + N+++ K G+ H+ +S+NNTI+ +TD+ G IS S G +P+AA
Sbjct: 16 SGSRKNVRRIPK-GVIHVQASFNNTIVTVTDVRG-RVISWSSAGTCGFRGTRRGTPFAAQ 73
Query: 62 LAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPI 121
AA A +++G+ +R+ K PG G AA+RA+ R+G+ + V DVTP+
Sbjct: 74 TAAGNAIRAVVDQGMQRAEVRI--------KGPGLGRDAALRAIRRSGILLSFVRDVTPM 125
Query: 122 PHDGTRPKGGRR 133
PH+G RP RR
Sbjct: 126 PHNGCRPPKKRR 137
>sp|O83241|RS11_TREPA 30S RIBOSOMAL PROTEIN S11 >gi|7440319|pir||A71352 probable
ribosomal protein S11 (rpsK) - syphilis spirochete
>gi|3322480|gb|AAC65200.1| (AE001203) ribosomal protein
S11 (rpsK) [Treponema pallidum]
Length = 126
Score = 80.8 bits (196), Expect = 6e-15
Identities = 48/132 (36%), Positives = 74/132 (55%), Gaps = 13/132 (9%)
Query: 6 VNIKKKEKWGI----AHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAM 61
V K+KEK + +I +++NNTII +TD+ G SGG+ + + +P+AA
Sbjct: 3 VTKKRKEKKNVYEGNVYIQATFNNTIITVTDLQGNALSWASSGGLGFNGAK-KSTPFAAQ 61
Query: 62 LAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPI 121
A A ++A + G+ VH+ V K PG G ++AIR L GL++ + D+TPI
Sbjct: 62 TVAEAAVQKAQQCGLREVHVFV--------KGPGIGRESAIRMLGTMGLRVRSIRDITPI 113
Query: 122 PHDGTRPKGGRR 133
PH+G RP+ RR
Sbjct: 114 PHNGCRPRKTRR 125
>sp|Q46451|RS11_MYCSP 30S RIBOSOMAL PROTEIN S11 >gi|625802|pir||D49923 ribosomal protein
S11 - Chlamydia trachomatis >gi|639723|gb|AAA61683.1|
(L09636) ribosomal protein S11 [Chlamydia muridarum]
Length = 125
Score = 79.6 bits (193), Expect = 1e-14
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSG-GMVVKADRDEPSPYAAMLAARRA 67
KK GIAHI+S+Y NTI+ +D+ G + WS G + + +PYAA LAA A
Sbjct: 6 KKVVTQGIAHIHSTYQNTIVSFSDLKG--NVFAWSSSGAIGYKGTKKKTPYAAGLAAAAA 63
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
E+A E G+ V I V K GPG A + + +G I V+DVTP PH+GTR
Sbjct: 64 VEKAKEFGLKEVSILV--------KGVGPGKSTARKQIETSGFTIKDVKDVTPTPHNGTR 115
Query: 128 P 128
P
Sbjct: 116 P 116
>sp|Q9Z7S7|RS11_CHLPN 30S RIBOSOMAL PROTEIN S11 >gi|7440337|pir||E72053 ribosomal protein
S11 CP0120 [imported] - Chlamydophila pneumoniae
(strains CWL029 and AR39) >gi|4376925|gb|AAD18766.1|
(AE001647) S11 Ribosomal Protein [Chlamydophila
pneumoniae CWL029] >gi|7189054|gb|AAF38003.1| (AE002173)
ribosomal protein S11 [Chlamydophila pneumoniae AR39]
>gi|8978999|dbj|BAA98834.1| (AP002547) S11 ribosomal
protein [Chlamydophila pneumoniae J138]
Length = 133
Score = 79.2 bits (192), Expect = 2e-14
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +++NNTI+ ITD G IS S G V + + S +AA +AA+ AA+ A+
Sbjct: 23 GVVHVKATFNNTIVSITDPAG-NVISWASAGKVGYSGSRKSSAFAATVAAQDAAKTAMNS 81
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ V + ++ G G ++A+RAL AGL + + D TP+PH+G RP+ RR
Sbjct: 82 GLKEVEVCLKGTGA--------GRESAVRALISAGLVVSVIRDETPVPHNGCRPRKRRR 132
>gi|11497559 ribosomal protein S11 [Spinacia oleracea]
>gi|7636140|emb|CAB88760.1| (AJ400848) ribosomal protein
S11 [Spinacia oleracea]
Length = 138
Score = 78.8 bits (191), Expect = 2e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +S+NNTI+ +TD+ G +S S G +P+AA AA A +E+
Sbjct: 28 GVIHVQASFNNTIVTVTDVRG-RVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQ 86
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ + + K PG G AA+RA+ R+G+ + V DVTP+PH+G RP RR
Sbjct: 87 GMQRAEVMI--------KGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRR 137
>gi|11467767 ribosomal protein S11 [Nephroselmis olivacea]
>gi|5880696|gb|AAD54789.1|AF137379_12 (AF137379)
ribosomal protein S11 [Nephroselmis olivacea]
Length = 130
Score = 78.4 bits (190), Expect = 3e-14
Identities = 45/127 (35%), Positives = 69/127 (53%), Gaps = 11/127 (8%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSG-GMVVKADRDEPSPYAAMLAARR 66
+K+K G+ HI +S+NNTI+ ITD +G + WS G + +P+AA AA
Sbjct: 13 LKRKVSKGVVHIQASFNNTIVTITDSSGG--VLAWSSAGACGFRGAKKGTPFAAQTAAET 70
Query: 67 AAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
A + +++G+ I V+ PG G + AIRAL AG+ + + D+T +PH+G
Sbjct: 71 AIRQCIDQGMRQADIIVQGPGN--------GRETAIRALQLAGVGVSLIRDITSVPHNGC 122
Query: 127 RPKGGRR 133
RP RR
Sbjct: 123 RPPKQRR 129
>pir||A82918 ribosomal protein S11 UU256 [imported] - Ureaplasma urealyticum
>gi|6899226|gb|AAF30665.1|AE002122_34 (AE002122)
ribosomal protein S11 [Ureaplasma urealyticum]
Length = 121
Score = 78.4 bits (190), Expect = 3e-14
Identities = 43/114 (37%), Positives = 68/114 (58%), Gaps = 9/114 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
GIA+I+++ NNTII + D G+ +S S G + + +PY+A +AA AA+ ++
Sbjct: 12 GIAYIHATKNNTIITLADEQGS-VLSWASSGSIGYKGTKKKTPYSAGIAAEAAAKAVIDM 70
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
G+ V + V G S+ AIR+L AGL++ +++DVTPIPH+G RP
Sbjct: 71 GLKSVEVHVNGTGASRD--------TAIRSLQAAGLEVTKIKDVTPIPHNGCRP 116
>pir||C81663 ribosomal protein S11 TC0795 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190823|gb|AAF39598.1| (AE002347)
ribosomal protein S11 [Chlamydia muridarum]
Length = 132
Score = 78.0 bits (189), Expect = 4e-14
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +++NNTI+ ITD G IS S G V + + S +AA +AA+ AA+ A+
Sbjct: 22 GVVHVKATFNNTIVTITDPAG-NVISWASAGKVGYSGSRKSSAFAATVAAQDAAKTAMSS 80
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ V + ++ G G ++A+RAL +GL + + D TP+PH+G RP+ RR
Sbjct: 81 GLKEVEVSLKGTGA--------GRESAVRALISSGLIVSVIRDETPVPHNGCRPRKRRR 131
>sp|P47761|RS11_CHLTR 30S RIBOSOMAL PROTEIN S11 >gi|3328945|gb|AAC68109.1| (AE001323) S11
Ribosomal Protein [Chlamydia trachomatis]
Length = 132
Score = 77.6 bits (188), Expect = 6e-14
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +++NNTI+ ITD G IS S G V + + S +AA +AA+ AA+ A+
Sbjct: 22 GVVHVKATFNNTIVTITDPAG-NVISWASAGKVGYSGSRKSSAFAATVAAQDAAKAAMSS 80
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ V + ++ G G ++A+RAL +GL + + D TP+PH+G RP+ RR
Sbjct: 81 GLKEVEVGLKGTGA--------GRESAVRALISSGLIVSVIRDETPVPHNGCRPRKRRR 131
>sp|Q9ZCS8|RS11_RICPR 30S RIBOSOMAL PROTEIN S11 >gi|7440330|pir||B71669 ribosomal protein
S11 - Rickettsia prowazekii >gi|3861176|emb|CAA15076.1|
(AJ235272) 30S RIBOSOMAL PROTEIN S11 (rpsK) [Rickettsia
prowazekii]
Length = 127
Score = 77.3 bits (187), Expect = 7e-14
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 4 EQVNIKKKEKW---GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAA 60
+ + +KKK+K G+ HI +S+NNTI+ TDI G S +GG K R + +PYAA
Sbjct: 3 QTIKVKKKKKTITLGVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGAR-KATPYAA 61
Query: 61 MLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTP 120
+ +A+E+A E G+ + IR+ PG + ++A+RAL + + DV+
Sbjct: 62 QVTIDKASEKAKECGLKTISIRIGGPGAQR--------ESAMRALFGQNFVVTSILDVSS 113
Query: 121 IPHDGTRPKGGRR 133
I H+G RP RR
Sbjct: 114 IAHNGVRPPKRRR 126
>emb|CAB67192.1| (AJ271079) ribosomal protein S11 [Oenothera elata subsp. hookeri]
Length = 144
Score = 77.3 bits (187), Expect = 7e-14
Identities = 41/119 (34%), Positives = 67/119 (55%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +S++NTI+ +TD+ G IS S G + +P+AA AA A +++
Sbjct: 34 GVIHVQASFHNTIVTVTDVRG-RVISWSSAGTCGFKSTRKGTPFAAQTAAGDAIRPVVDQ 92
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ +R+ K PG G AA+RA+ R+G+++ + DVTP+PH+G P RR
Sbjct: 93 GMQRAEVRI--------KGPGLGRDAALRAIRRSGIRLSCIRDVTPLPHNGCMPPKKRR 143
>pir||I40745 ribosomal protein S11 - Chlamydia trachomatis
>gi|971161|gb|AAA74988.1| (L33834) ribosomal protein S11
[Chlamydia trachomatis]
Length = 132
Score = 76.9 bits (186), Expect = 9e-14
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +++NNTI+ ITD G IS S G V + S +AA +AA+ AA+ A+
Sbjct: 22 GVVHVKATFNNTIVTITDPAG-NVISWASAGKVGYPGSRKSSAFAATVAAQDAAKAAMSS 80
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ V + ++ G G ++A+RAL +GL + + D TP+PH+G RP+ RR
Sbjct: 81 GLKEVEVGLKGTGA--------GRESAVRALISSGLIVSVIRDETPVPHNGCRPRKRRR 131
>gi|7524920 30S ribosomal protein S11 [Chlorella vulgaris]
>gi|3024565|sp|P56359|RR11_CHLVU CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|7440334|pir||T07350 ribosomal
protein S11 - Chlorella vulgaris chloroplast
>gi|2224514|dbj|BAA57998.1| (AB001684) 30S ribosomal
protein S11 [Chlorella vulgaris]
Length = 130
Score = 76.9 bits (186), Expect = 9e-14
Identities = 48/127 (37%), Positives = 69/127 (53%), Gaps = 13/127 (10%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWS--GGMVVKADRDEPSPYAAMLAARR 66
++K G+AHI S++NNTI+ IT T + WS G K R + +P AA AA
Sbjct: 14 REKVLLGVAHIQSTFNNTIVTIT--TNKGNVLAWSSAGACGFKGARKK-TPLAAKQAAEN 70
Query: 67 AAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
AA+ + +G+ + + V+ G G +AA+R L AGL I + D+TPIPH+G
Sbjct: 71 AAQTCVSQGMREIRVNVKGAGA--------GREAALRGLRDAGLNITIIRDITPIPHNGC 122
Query: 127 RPKGGRR 133
RP RR
Sbjct: 123 RPPKKRR 129
>gi|11465991 ribosomal protein S11 [Nicotiana tabacum]
>gi|133729|sp|P06365|RR11_TOBAC CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|70941|pir||R3NT11 ribosomal
protein S11, chloroplast - common tobacco chloroplast
>gi|11861|emb|CAA77377.1| (Z00044) ribosomal protein S11
[Nicotiana tabacum] >gi|10442806|gb|AAG15579.1|
(AY005806) ribosomal protein S11 [synthetic construct]
>gi|225229|prf||1211235BL ribosomal protein S11
[Nicotiana tabacum]
Length = 138
Score = 76.5 bits (185), Expect = 1e-13
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +S+NNTI+ +TD+ G +G K R +P+AA AA A +++
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTR-RGTPFAAQTAAANAIRTVVDQ 86
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ + + K PG G AA+RA+ R+G+ + V DVTP+PH+G RP RR
Sbjct: 87 GMQRAEVMI--------KGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGCRPPKKRR 137
>sp|P06587|RR11_PEA CHLOROPLAST 30S RIBOSOMAL PROTEIN S11 >gi|70942|pir||R3PM11
ribosomal protein S11, chloroplast - garden pea
chloroplast >gi|12179|emb|CAA33667.1| (X15645) ribosomal
protein S11 (AA 1-138) [Pisum sativum]
>gi|12184|emb|CAA28693.1| (X05029) ribosomal protein S11
(AA 1-138) [Pisum sativum]
Length = 138
Score = 75.7 bits (183), Expect = 2e-13
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ +I +S+NNTI+ +TD+ G IS S G +P+AA AA A + +E+
Sbjct: 28 GVIYIQASFNNTIVTVTDVRG-RVISWSSAGSCGFKGTRRGTPFAAQTAAGNAIQTVVEQ 86
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ +R+ K PG G AA+RA+ R+G+ + + DVTP+PH+G R RR
Sbjct: 87 GMQRAEVRI--------KGPGLGRDAALRAIYRSGILLKVIRDVTPLPHNGCRAPKKRR 137
>gb|AAC95317.1| (AF050665) ribosomal protein S11 [Spirogyra maxima]
Length = 130
Score = 75.7 bits (183), Expect = 2e-13
Identities = 41/126 (32%), Positives = 66/126 (51%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+K+K I H+ +S+NNTI+ +TD+ G + IS S G + +P+AA AA A
Sbjct: 13 VKRKTPKAIIHVQASFNNTIVTVTDVQG-QVISSCSAGACGFKGAKKNTPFAAQTAAENA 71
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
+++G+ + + PG G A+RA+ +G+ + V DVTP+PH+G R
Sbjct: 72 IRLLIDQGLKQAEVMISGPGR--------GRDTALRAIRNSGITLSLVRDVTPLPHNGCR 123
Query: 128 PKGGRR 133
RR
Sbjct: 124 RPKTRR 129
>pir||G75312 ribosomal protein S11 - Deinococcus radiodurans (strain R1)
>gi|6459924|gb|AAF11676.1|AE002047_9 (AE002047)
ribosomal protein S11 [Deinococcus radiodurans]
Length = 131
Score = 75.7 bits (183), Expect = 2e-13
Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G A++++SYNNTI+ ITD+ G +++ SGG + + +PYAA LAA A ++A
Sbjct: 20 GRAYVHASYNNTIVTITDLDG-NSVAWSSGGTIGYKGSKKGTPYAAQLAAADAVKKAQTS 78
Query: 75 -GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPK 129
G+ V + VR G G + AIRA+ +G+++ + D +P+PH+G RPK
Sbjct: 79 FGMAAVDVIVRGSGS--------GREQAIRAIQASGIEVRSIMDDSPVPHNGCRPK 126
>sp|P06506|RR11_SPIOL CHLOROPLAST 30S RIBOSOMAL PROTEIN S11 >gi|81525|pir||B23525
ribosomal protein S11 - spinach chloroplast
>gi|12264|emb|CAA27213.1| (X03496) pot. ribosomal
protein S11 (aa 1-138) [Spinacia oleracea]
Length = 138
Score = 74.5 bits (180), Expect = 5e-13
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +S+NNTI+ +TD+ G +S S G +P+AA AA A +E+
Sbjct: 28 GVIHVQASFNNTIVTVTDVRG-RVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQ 86
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ + + K P G AA+RA+ R+G+ + V +VTP+PH+G RP RR
Sbjct: 87 GMQRAEVMI--------KGPSLGRDAALRAIRRSGILLSFVRNVTPMPHNGCRPPKKRR 137
>sp|P56018|RS11_HELPY 30S RIBOSOMAL PROTEIN S11 >gi|7440327|pir||G64681 ribosomal protein
S11 - Helicobacter pylori (strain 26695)
>gi|2314461|gb|AAD08338.1| (AE000633) ribosomal protein
S11 (rps11) [Helicobacter pylori 26695]
Length = 131
Score = 74.5 bits (180), Expect = 5e-13
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 10/127 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK G+ +I +++NNT I ITD G +GG+ K + + +PYAA A A
Sbjct: 13 VKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSK-KSTPYAAQQAVESA 71
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRAL-ARAGLKIGRVEDVTPIPHDGT 126
+A E G+ V I+V+ PG G + AI+++ A G+K+ ++D+TP+PH+G
Sbjct: 72 LSKAKEHGVKEVGIKVQGPGS--------GRETAIKSVGATEGIKVLWIKDITPLPHNGC 123
Query: 127 RPKGGRR 133
RP RR
Sbjct: 124 RPPKRRR 130
>gi|11466522 ribosomal protein S11 [Reclinomonas americana]
>gi|7440328|pir||S78153 ribosomal protein S11 -
Reclinomonas americana (ATCC 50394) mitochondrion
>gi|2258352|gb|AAD11886.1| (AF007261) ribosomal protein
S11 [Reclinomonas americana]
Length = 129
Score = 74.1 bits (179), Expect = 6e-13
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
+G H+ +S+ NTI+ ITD G TIS S G + YAA AA A ++A+E
Sbjct: 18 YGHVHVKASFTNTIVTITDCMG-NTISWASSGSSGFKGARRSTSYAAQAAAENAGKKAIE 76
Query: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
GI V + R G PG + + L AGLKI V D+TPIPH+G R K RR
Sbjct: 77 HGIRSVKLITRGLG--------PGRLSCTKGLLSAGLKISLVGDLTPIPHNGCRAKKKRR 128
>sp|Q9ZJT3|RS11_HELPJ 30S RIBOSOMAL PROTEIN S11 >gi|7440335|pir||G71832 ribosomal protein
S11 - Helicobacter pylori (strain J99)
>gi|4155843|gb|AAD06817.1| (AE001547) 30S RIBOSOMAL
PROTEIN S11 [Helicobacter pylori J99]
Length = 131
Score = 74.1 bits (179), Expect = 6e-13
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 10/127 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK G+ +I +++NNT I ITD G +GG+ K + + +PYAA A A
Sbjct: 13 VKKNIARGVVYISATFNNTNITITDEMGNVICWSTAGGLGFKGSK-KSTPYAAQQAVESA 71
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRAL-ARAGLKIGRVEDVTPIPHDGT 126
+A E G+ V I+V+ PG G + AI+++ A G+K+ ++D+TP+PH+G
Sbjct: 72 LSKAKEHGVKEVGIKVQGPGS--------GRETAIKSVGATEGVKVLWIKDITPLPHNGC 123
Query: 127 RPKGGRR 133
RP RR
Sbjct: 124 RPPKRRR 130
>gi|11467041 30S ribosomal protein S11 [Euglena gracilis]
>gi|133721|sp|P27419|RR11_EUGGR CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|418865|pir||S34553 ribosomal
protein S11, chloroplast - Euglena gracilis chloroplast
>gi|336888|gb|AAA84229.1| (M22010) ribosomal protein S11
[Euglena gracilis] >gi|415791|emb|CAA50135.1| (X70810)
30S ribosomal protein S11 [Euglena gracilis]
>gi|228206|prf||1718312B ribosomal protein S11 [Euglena
gracilis]
Length = 129
Score = 72.6 bits (175), Expect = 2e-12
Identities = 41/125 (32%), Positives = 65/125 (51%), Gaps = 9/125 (7%)
Query: 9 KKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAA 68
KKK GI HI ++YNN ++ ++D G SG K+ + + +P A A
Sbjct: 13 KKKFPKGIVHIKTTYNNVLVSVSDPKGNVIAWSSSGACGFKSSK-KATPLATKTTTAIAV 71
Query: 69 EEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
++A+E+G+ V I + PG G + A++ + GL+I + DVTP+PH+G RP
Sbjct: 72 KKAIEQGLQKVEINISGPG--------TGRETALKCVQSLGLRISCIRDVTPLPHNGCRP 123
Query: 129 KGGRR 133
RR
Sbjct: 124 SKRRR 128
>pir||G81254 30S ribosomal protein S11 Cj1593 [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6969010|emb|CAB73581.1|
(AL139079) 30S ribosomal protein S11 [Campylobacter
jejuni]
Length = 130
Score = 72.2 bits (174), Expect = 2e-12
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 10/127 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK GI +I +++NNT++ +TD G +GG+ K + + +PYAA A A
Sbjct: 12 VKKNIAKGIVYISATFNNTMVTVTDEMGNAIAWSSAGGLGFKGSK-KSTPYAAQQAVEDA 70
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRAL-ARAGLKIGRVEDVTPIPHDGT 126
+A E GI V I+V+ PG G + A++++ A G+K+ ++D+TP+ H+G
Sbjct: 71 LNKAKEHGIKEVGIKVQGPGS--------GRETAVKSVGAMEGIKVTFLKDITPLAHNGC 122
Query: 127 RPKGGRR 133
RP RR
Sbjct: 123 RPPKRRR 129
>gi|7524685 ribosomal protein S11 [Pinus thunbergii]
>gi|1173180|sp|P41630|RR11_PINTH CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|7440339|pir||T07518 ribosomal
protein S11 - Japanese black pine chloroplast
>gi|1262679|dbj|BAA04396.1| (D17510) ribosomal protein
S11 [Pinus thunbergii]
Length = 130
Score = 70.6 bits (170), Expect = 7e-12
Identities = 38/119 (31%), Positives = 62/119 (51%), Gaps = 9/119 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ ++ +S+NNTI+ TD+ G + +S S G +P+AA AA +++
Sbjct: 20 GVIYVQASFNNTIVTATDVRG-QVLSWSSAGACGFKGTRRGTPFAAQTAAENVIRALMDR 78
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ V + + PG G A+R + R+G+ + V DVTP+PH+G RP RR
Sbjct: 79 GMERVEVMISGPGR--------GRDTALRTIRRSGILLSFVRDVTPMPHNGCRPPKKRR 129
>gi|11467224 ribosomal protein S11 [Zea mays] >gi|133724|sp|P09561|RR11_MAIZE
CHLOROPLAST 30S RIBOSOMAL PROTEIN S11
>gi|1363597|pir||S58584 ribosomal protein S11 - maize
chloroplast >gi|552742|gb|AAA84494.1| (M35831) ribosomal
protein S11 (rpS11) [Zea mays]
>gi|902254|emb|CAA60318.1| (X86563) ribosomal protein
S11 [Zea mays]
Length = 143
Score = 70.2 bits (169), Expect = 9e-12
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
GI H+ +S+NNTII +TD G +G K+ R + SPYA R A +
Sbjct: 36 GIIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSR-KASPYAGQ---RTAVDAIRTV 91
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ + V+ G G AA+RA+A++G+++ + DVTP+PH+G RP RR
Sbjct: 92 GLQRAEVMVKGAGS--------GRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRR 142
>gi|11466822 ribosomal protein S11 [Oryza sativa]
>gi|133726|sp|P12096|RR11_ORYSA CHLOROPLAST 30S
RIBOSOMAL PROTEIN S11 >gi|70943|pir||R3RZ11 ribosomal
protein S11 - rice chloroplast >gi|12019|emb|CAA33980.1|
(X15901) ribosomal protein S11 [Oryza sativa]
>gi|226640|prf||1603356BP ribosomal protein S11 [Oryza
sativa]
Length = 143
Score = 69.9 bits (168), Expect = 1e-11
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
G+ H+ +S+NNTII +TD G +G K+ R + SPYA R A +
Sbjct: 36 GVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSR-KASPYAGQ---RTAVDAIRTV 91
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRR 133
G+ + V+ G G AA+RA+A++G+++ + DVTP+PH+G RP RR
Sbjct: 92 GLQRAEVMVKGAGS--------GRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRR 142
>gi|11465442 unknown; 30S ribosomal protein S11 [Cyanidium caldarium]
>gi|6466345|gb|AAF12927.1|AF022186_49 (AF022186)
unknown; 30S ribosomal protein S11 [Cyanidium caldarium]
Length = 129
Score = 69.5 bits (167), Expect = 2e-11
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 8 IKKKEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRA 67
+KK G+ I S++NNTI+ TD G + I+ SGG + +P+AA A +
Sbjct: 12 LKKSVIDGLIIINSTFNNTIVTATDCYG-KVIAWASGGTEGFKGAKKGTPFAAQSATEKL 70
Query: 68 AEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127
+ LE+G +HI V PG PG + +IR+ +GL+I ++D+T +P +G R
Sbjct: 71 IKALLEQGTQRIHISVSGPG--------PGRETSIRSFQTSGLQIISIKDITSVPFNGCR 122
Query: 128 PKGGRR 133
P RR
Sbjct: 123 PPKKRR 128
>gi|11467126 rps11 [Marchantia polymorpha] >gi|417734|sp|P26870|RT11_MARPO
MITOCHONDRIAL RIBOSOMAL PROTEIN S11
>gi|541552|pir||S41139 ribosomal protein S11,
mitochondrial - liverwort (Marchantia polymorpha)
mitochondrion >gi|250826|gb|AAB22418.1| ribosomal
protein S11 [Marchantia polymorpha=liverwort, Peptide
Mitochondrial, 125 aa] >gi|786211|gb|AAC09424.1|
(M68929) rps11 [Marchantia polymorpha]
Length = 125
Score = 68.7 bits (165), Expect = 3e-11
Identities = 44/123 (35%), Positives = 63/123 (50%), Gaps = 9/123 (7%)
Query: 11 KEKWGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEE 70
++K I +I S++ NTII +TD G SG + K R + YAA A AA
Sbjct: 11 QKKHCITYIQSTFGNTIITLTDYNGNTKTWSSSGSVGFKGSRRSTN-YAAQATAENAARV 69
Query: 71 ALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKG 130
A++ G V +R+ K G G ++++R L GL I ++ DVTP PH+G RP
Sbjct: 70 AIQLGFKFVEVRI--------KGLGYGKESSLRGLKLGGLIITKIRDVTPTPHNGCRPPK 121
Query: 131 GRR 133
RR
Sbjct: 122 KRR 124
>sp|Q29303|RS14_PIG 40S RIBOSOMAL PROTEIN S14
Length = 79
Score = 67.9 bits (163), Expect = 5e-11
Identities = 29/52 (55%), Positives = 42/52 (80%)
Query: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAAR 65
+G+ HI++S N+T +H+TD++G E+I R +GGM +KADR E SPY AMLAA+
Sbjct: 26 FGVCHIFASPNDTFVHVTDLSGXESICRVTGGMKMKADRXEXSPYXAMLAAQ 77
>sp|Q50296|RS11_MYCPN 30S RIBOSOMAL PROTEIN S11 >gi|2127653|pir||S62818 ribosomal protein
S11 - Mycoplasma pneumoniae (strain ATCC 29342)
>gi|2146621|pir||S73967 ribosomal protein S11 -
Mycoplasma pneumoniae (SGC3) (ATCC 29342)
>gi|1215698|gb|AAC43691.1| (U34795) RpsK [Mycoplasma
pneumoniae] >gi|1674346|gb|AAB96289.1| (AE000061)
ribosomal protein S11 [Mycoplasma pneumoniae]
Length = 121
Score = 67.1 bits (161), Expect = 8e-11
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 15 GIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEK 74
GI H+ S NNTI+ +D G SG M K R + +PY+A +AA + A+ E
Sbjct: 12 GIIHVSCSPNNTIVSASDPGGNVLCWASSGTMGFKGSRKK-TPYSAGIAADKVAKTVKEM 70
Query: 75 GIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRP 128
G+ V + V K G G AIR+ A AGL I + + TPIPH+G +P
Sbjct: 71 GMATVKLFV--------KGTGRGKDTAIRSFANAGLSITEINEKTPIPHNGCKP 116
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.315 0.133 0.387
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54949986
Number of Sequences: 2977
Number of extensions: 2210371
Number of successful extensions: 4738
Number of sequences better than 1.0e-10: 104
Number of HSP's better than 0.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 4579
Number of HSP's gapped (non-prelim): 104
length of query: 137
length of database: 189,106,746
effective HSP length: 54
effective length of query: 83
effective length of database: 156,788,448
effective search space: 13013441184
effective search space used: 13013441184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 161 (67.1 bits)