BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0368 (rps2P) DE:SSU ribosomal protein S2P (rps2P)
(202 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75172 ssu ribosomal protein s2p (rps2p) PAB0368 - Pyrococc... 403 e-112
sp|O59295|RS2_PYRHO 30S RIBOSOMAL PROTEIN S2P >gi|7441126|pir||E... 400 e-111
sp|O26150|RS2_METTH 30S RIBOSOMAL PROTEIN S2P >gi|7441127|pir||D... 275 2e-73
sp|P54109|RS2_METJA 30S RIBOSOMAL PROTEIN S2P >gi|2826355|gb|AAB... 268 3e-71
pir||F64422 ribosomal protein HS2 homolog - Methanococcus jannas... 268 3e-71
emb|CAC12315.1| (AL445066) probable 30S ribosomal protein S2 [Th... 251 4e-66
sp|P95993|RS2_SULSO 30S RIBOSOMAL PROTEIN S2P >gi|7441129|pir||S... 245 2e-64
gb|AAK40428.1| SSU ribosomal protein S2AB (rps2AB) [Sulfolobus s... 245 2e-64
gi|11498733 SSU ribosomal protein S2P (rps2P) [Archaeoglobus ful... 237 6e-62
sp|P29202|RS2_HALMA 30S RIBOSOMAL PROTEIN S2P (HS2) (ORFMSG) >gi... 228 4e-59
gb|AAG19527.1| (AE005043) 30S ribosomal protein S2P; Rps2p [Halo... 227 7e-59
sp|Q9YB45|RS2_AERPE 30S RIBOSOMAL PROTEIN S2P >gi|7441131|pir||D... 215 3e-55
sp|Q01291|RS0_NEUCR 40S RIBOSOMAL PROTEIN S0 (RIBOSOME-ASSOCIATE... 170 9e-42
pir||T40637 40s ribosomal protein s0 - fission yeast (Schizosac... 169 2e-41
sp|O80377|RSP4_DAUCA 40S RIBOSOMAL PROTEIN SA (P40) >gi|7441130|... 164 5e-40
sp|O22518|RSP4_SOYBN 40S RIBOSOMAL PROTEIN SA (P40) >gi|7441124|... 164 7e-40
pir||S30570 laminin receptor homolog - Arabidopsis thaliana >gi|... 164 9e-40
pir||A54860 p40 protein homolog - Arabidopsis thaliana >gi|40290... 164 9e-40
sp|Q08682|RSP4_ARATH 40S RIBOSOMAL PROTEIN SA (P40) (LAMININ REC... 164 9e-40
sp|Q01661|RS0_PNECA 40S RIBOSOMAL PROTEIN S0 (EXTRACELLULAR MATR... 162 4e-39
sp|P39478|RS2_SULAC 30S RIBOSOMAL PROTEIN S2P >gi|629410|pir||S4... 162 4e-39
gb|AAC97937.1| (AF097522) laminin receptor-like protein [Brassic... 162 4e-39
sp|P38980|RSP4_TRIGR 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LA... 161 6e-39
sp|O65751|RSP4_CICAR 40S RIBOSOMAL PROTEIN SA (P40) >gi|3204099|... 161 6e-39
gi|11427321 similar to laminin receptor 1 (67kD, ribosomal prote... 161 6e-39
emb|CAA43469.1| (X61156) laminin-binding protein [Homo sapiens] 161 8e-39
sp|P50890|RSP4_CHICK 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KDA L... 160 1e-38
pir||A56880 laminin receptor, 67K - human >gi|250127|gb|AAB22299... 159 2e-38
gi|8393693 laminin receptor 1 [Rattus norvegicus] >gi|730681|sp|... 159 2e-38
pir||S42405 ribosomal protein RS.40K, cytosolic [validated] - rat 159 2e-38
emb|CAB92099.1| (AL356333) 40s ribosomal protein s0B [Schizosacc... 159 2e-38
gi|6754968 P40-8, functional [Mus musculus] >gi|91035|pir||A2939... 159 2e-38
gi|9845502 laminin receptor 1; Laminin receptor-1 (67kD); 67kD, ... 159 2e-38
prf||1405340A protein 40kD [Mus musculus] 159 2e-38
gb|AAB67866.1| (U66223) p40 protein homolog [Arabidopsis thalian... 159 2e-38
sp|P14206|RSP4_MOUSE 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LA... 159 3e-38
sp|P26452|RSP4_BOVIN 40S RIBOSOMAL PROTEIN P40 (C10 PROTEIN) >gi... 157 7e-38
sp|P38981|RSP4_URECA 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LA... 157 7e-38
sp|P46769|RSP4_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN SA (P40) >gi... 157 7e-38
sp|P38982|RSP4_CRIGR 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LA... 157 9e-38
sp|P38984|RSP4_CHLVR 40S RIBOSOMAL PROTEIN SA (P40) (33 KD LAMIN... 157 1e-37
emb|CAB77627.1| (AJ251858) YST1 protein [Candida albicans] 156 2e-37
sp|O42817|RS0_CANAL 40S RIBOSOMAL PROTEIN S0 >gi|2910999|emb|CAA... 156 2e-37
gi|6323077 Ribosomal protein S0B; Rps0bp [Saccharomyces cerevisi... 155 3e-37
gi|6321653 Ribosomal protein S0A; Rps0ap [Saccharomyces cerevisi... 155 5e-37
emb|CAA33112.1| (X15005) pot. lamimin-binding protein (AA 1 - 30... 153 1e-36
gb|AAD30064.1|AF133210_1 (AF133210) laminin receptor precursor-l... 153 1e-36
sp|P38979|RSP4_DROME 40S RIBOSOMAL PROTEIN SA (P40) (STUBARISTA ... 150 1e-35
pir||S52593 ribosome-associated protein p40 - fruit fly (Drosoph... 150 1e-35
gb|AAF45638.1| (AE003421) sta gene product [Drosophila melanogas... 150 1e-35
gb|AAA28667.1| (M77133) laminin receptor [Drosophila melanogaster] 150 2e-35
sp|P46771|RSP4_STRPU 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LA... 118 4e-26
sp|P46770|RSP4_ECHGR 40S RIBOSOMAL PROTEIN SA (P40) (LAMININ-BIN... 118 5e-26
gb|AAC50313.1| (U36484) laminin-binding protein [Homo sapiens] 116 2e-25
dbj|BAA21994.1| (AB002752) ribosomal protein SA (P40) / laminin ... 115 5e-25
dbj|BAA21980.1| (AB002730) ribosomal protein SA (P40) / laminin ... 97 2e-19
emb|CAB57256.1| (AJ270229) hypothetical protein [Entodinium caud... 89 5e-17
>pir||D75172 ssu ribosomal protein s2p (rps2p) PAB0368 - Pyrococcus abyssi
(strain Orsay) >gi|5457969|emb|CAB49459.1| (AJ248284)
SSU ribosomal protein S2P (rps2P) [Pyrococcus abyssi]
Length = 202
Score = 403 bits (1024), Expect = e-112
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA 60
MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA
Sbjct: 1 MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA 60
Query: 61 RFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDP 120
RFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDP
Sbjct: 61 RFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDP 120
Query: 121 RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG 180
RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG
Sbjct: 121 RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG 180
Query: 181 EISSREEFKIPVEEFEMKIVRR 202
EISSREEFKIPVEEFEMKIVRR
Sbjct: 181 EISSREEFKIPVEEFEMKIVRR 202
>sp|O59295|RS2_PYRHO 30S RIBOSOMAL PROTEIN S2P >gi|7441126|pir||E71042 probable
ribosomal protein S2 - Pyrococcus horikoshii
>gi|3258058|dbj|BAA30741.1| (AP000006) 205aa long
hypothetical 30S ribosomal protein S2 [Pyrococcus
horikoshii]
Length = 205
Score = 400 bits (1016), Expect = e-111
Identities = 200/202 (99%), Positives = 202/202 (99%)
Query: 1 MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA 60
MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA
Sbjct: 4 MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA 63
Query: 61 RFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDP 120
RF+PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEP+VIIITDP
Sbjct: 64 RFEPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPEVIIITDP 123
Query: 121 RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG 180
RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG
Sbjct: 124 RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG 183
Query: 181 EISSREEFKIPVEEFEMKIVRR 202
EISSREEFKIPVEEFEMKIVRR
Sbjct: 184 EISSREEFKIPVEEFEMKIVRR 205
>sp|O26150|RS2_METTH 30S RIBOSOMAL PROTEIN S2P >gi|7441127|pir||D69157 ribosomal protein
Sa - Methanobacterium thermoautotrophicum (strain Delta
H) >gi|2621079|gb|AAB84551.1| (AE000796) ribosomal
protein Sa (E.coli S2) [Methanobacterium
thermoautotrophicum]
Length = 198
Score = 275 bits (697), Expect = 2e-73
Identities = 128/196 (65%), Positives = 161/196 (81%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E L+PLD+YLAAG+HIGTQQKT DM+K+IYRVR DGLYVLD+RKT++R+ A KFL++++
Sbjct: 3 ELLIPLDKYLAAGLHIGTQQKTADMEKYIYRVRSDGLYVLDIRKTNDRVIAASKFLSKYE 62
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P ILAVS R YGQ+PV+KFGEVTGAR IPGRF+PGT+TNP F EP+V++ TDPR+D
Sbjct: 63 PDDILAVSTRQYGQEPVRKFGEVTGARTIPGRFIPGTLTNPNYAKFIEPEVLVATDPRSD 122
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+ EA +IGIP+VAL DTENLL VD+AIP NNKGRKA+AL+YW+LAR+ L +G +
Sbjct: 123 SQAIIEAKQIGIPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLLARQFLREKGILK 182
Query: 184 SREEFKIPVEEFEMKI 199
E+ IP EFE+KI
Sbjct: 183 EDEDLDIPPTEFELKI 198
>sp|P54109|RS2_METJA 30S RIBOSOMAL PROTEIN S2P >gi|2826355|gb|AAB98985.1| (U67541) SSU
ribosomal protein S2P [Methanococcus jannaschii]
Length = 222
Score = 268 bits (678), Expect = 3e-71
Identities = 126/192 (65%), Positives = 156/192 (80%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E LVPLD YLA+G+HIGTQQKTKDM+KFIYRVR DGLYVLDVRKTDERL++A KFLAR++
Sbjct: 5 ELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE 64
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P+ ILAVS R+Y P+++FG+ TG R + GRF+PGT+TNPA K F EP+V+ I+DPR D
Sbjct: 65 PEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVD 124
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+KEA EIG+PIV L DTE+L S++DL IPTNNKG+KA+ALIY++L RE L NRG I+
Sbjct: 125 RQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVIT 184
Query: 184 SREEFKIPVEEF 195
+ EEF
Sbjct: 185 DDTKLPFTYEEF 196
>pir||F64422 ribosomal protein HS2 homolog - Methanococcus jannaschii
Length = 225
Score = 268 bits (678), Expect = 3e-71
Identities = 126/192 (65%), Positives = 156/192 (80%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E LVPLD YLA+G+HIGTQQKTKDM+KFIYRVR DGLYVLDVRKTDERL++A KFLAR++
Sbjct: 8 ELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE 67
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P+ ILAVS R+Y P+++FG+ TG R + GRF+PGT+TNPA K F EP+V+ I+DPR D
Sbjct: 68 PEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVD 127
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+KEA EIG+PIV L DTE+L S++DL IPTNNKG+KA+ALIY++L RE L NRG I+
Sbjct: 128 RQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVIT 187
Query: 184 SREEFKIPVEEF 195
+ EEF
Sbjct: 188 DDTKLPFTYEEF 199
>emb|CAC12315.1| (AL445066) probable 30S ribosomal protein S2 [Thermoplasma
acidophilum]
Length = 199
Score = 251 bits (635), Expect = 4e-66
Identities = 120/199 (60%), Positives = 157/199 (78%)
Query: 1 MADEYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLA 60
M +E L+P ++Y +GVHIGTQ K+ DMK +I+++R DGLY+LDV+KT+ +L VAGK LA
Sbjct: 1 MDEEMLIPEEEYQKSGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLA 60
Query: 61 RFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDP 120
RF+PQ IL V+ R Y +PV KF EVTGA AI GRF PGT+TNP++K + E VII+TDP
Sbjct: 61 RFEPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDP 120
Query: 121 RADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG 180
AD QAMKEA++IGIPI+AL D N +VDL IPTNNKGR++LA+IYW+LAREIL NRG
Sbjct: 121 LADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRG 180
Query: 181 EISSREEFKIPVEEFEMKI 199
I+S ++FK +++FE +I
Sbjct: 181 TITSYDQFKYTIDDFEAQI 199
>sp|P95993|RS2_SULSO 30S RIBOSOMAL PROTEIN S2P >gi|7441129|pir||S75421 ribosomal protein
HS2 homolog - Sulfolobus solfataricus
>gi|1707827|emb|CAA69535.1| (Y08257) ribosomal protein
RS2/HS2 homolog [Sulfolobus solfataricus]
Length = 231
Score = 245 bits (620), Expect = 2e-64
Identities = 114/198 (57%), Positives = 150/198 (75%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E LVP+D YL+AGVHIGT TK M+ F+YRVR +GLYVLDVRK DERL++A KFL+R+D
Sbjct: 34 ELLVPVDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD 93
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
PQ I+ V+ R Y +PV+KF EV G+RA+ GR +PGT TNP + + EP V++++DPR D
Sbjct: 94 PQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTD 153
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+KEA ++GIPIVA DT+ + Y+DL IP NNKGRK+LAL+YW LAR+IL R I
Sbjct: 154 TQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIP 213
Query: 184 SREEFKIPVEEFEMKIVR 201
+ +PV EFEM++V+
Sbjct: 214 PDGDLAVPVSEFEMRLVQ 231
>gb|AAK40428.1| SSU ribosomal protein S2AB (rps2AB) [Sulfolobus solfataricus]
Length = 231
Score = 245 bits (620), Expect = 2e-64
Identities = 114/198 (57%), Positives = 150/198 (75%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E LVP+D YL+AGVHIGT TK M+ F+YRVR +GLYVLDVRK DERL++A KFL+R+D
Sbjct: 34 ELLVPVDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD 93
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
PQ I+ V+ R Y +PV+KF EV G+RA+ GR +PGT TNP + + EP V++++DPR D
Sbjct: 94 PQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTD 153
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+KEA ++GIPIVA DT+ + Y+DL IP NNKGRK+LAL+YW LAR+IL R I
Sbjct: 154 TQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIP 213
Query: 184 SREEFKIPVEEFEMKIVR 201
+ +PV EFEM++V+
Sbjct: 214 PDGDLAVPVSEFEMRLVQ 231
>gi|11498733 SSU ribosomal protein S2P (rps2P) [Archaeoglobus fulgidus]
>gi|3914879|sp|O29132|RS2_ARCFU 30S RIBOSOMAL PROTEIN
S2P >gi|7441128|pir||D69391 SSU ribosomal protein S2P
(rps2P) homolog - Archaeoglobus fulgidus
>gi|2649456|gb|AAB90111.1| (AE001026) SSU ribosomal
protein S2P (rps2P) [Archaeoglobus fulgidus]
Length = 197
Score = 237 bits (599), Expect = 6e-62
Identities = 113/196 (57%), Positives = 147/196 (74%), Gaps = 5/196 (2%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
EYLVP D YLAAGVHIGTQ KT DMKKFI++VRQDGLYVLD+RK DER++VA KFL+R++
Sbjct: 7 EYLVPPDDYLAAGVHIGTQIKTGDMKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSRYE 66
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P IL V+ R Y KPV+ F +V G+ I GRF+PGT+TNP + + EP+V+ + DP D
Sbjct: 67 PSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAID 126
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+ EA +GIP+VAL D+ N + VDL IPTNNKGR+ALA++YW+LAREI RG
Sbjct: 127 KQAVSEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIRG--- 183
Query: 184 SREEFKIPVEEFEMKI 199
++F +E+FE ++
Sbjct: 184 --QDFTYSIEDFEAEL 197
>sp|P29202|RS2_HALMA 30S RIBOSOMAL PROTEIN S2P (HS2) (ORFMSG) >gi|99175|pir||G41715
ribosomal protein S2 [validated] - Haloarcula
marismortui >gi|148782|gb|AAA73102.1| (M76567) put.
membrane protein; putative [Haloarcula marismortui]
Length = 266
Score = 228 bits (575), Expect = 4e-59
Identities = 102/177 (57%), Positives = 136/177 (76%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
+ L+P++ YL AGVHIGTQQKT+DM++FI+RVR DGLYVLDV TDER++ A FL+ ++
Sbjct: 76 DLLIPVEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE 135
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P+ ILA S R YG+ P +KF E GAR GRF+PGT+TNP + EPD++++TDP D
Sbjct: 136 PEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGD 195
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRG 180
QA+KEAI +GIP++A+ D+ N S VDL +PTNNKGRKAL+++YW+LA E L RG
Sbjct: 196 AQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRG 252
>gb|AAG19527.1| (AE005043) 30S ribosomal protein S2P; Rps2p [Halobacterium sp.
NRC-1]
Length = 249
Score = 227 bits (573), Expect = 7e-59
Identities = 105/183 (57%), Positives = 137/183 (74%), Gaps = 3/183 (1%)
Query: 1 MADE---YLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGK 57
M+DE L+P++ YL AGVHIGTQQKT DM +FI+RVR DGLYVLDV +TD+R++ A
Sbjct: 53 MSDEEADLLIPVEDYLGAGVHIGTQQKTNDMDRFIHRVRTDGLYVLDVSRTDDRVRTAAD 112
Query: 58 FLARFDPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIII 117
FLA +DP+ IL S R YG+ P +KF E GARA GRF+PGT+TNP + EPDV+++
Sbjct: 113 FLANYDPEQILVTSSRQYGRFPAEKFAEAVGARARTGRFIPGTLTNPDYDGYIEPDVLVV 172
Query: 118 TDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILY 177
TDP D QA+KEAI +GIP++A+ D+ N VDL +PTNNKGR+AL+++YW+LA E L
Sbjct: 173 TDPIGDSQAVKEAITVGIPVIAMCDSNNQTGNVDLVVPTNNKGRRALSVVYWLLANETLD 232
Query: 178 NRG 180
RG
Sbjct: 233 RRG 235
>sp|Q9YB45|RS2_AERPE 30S RIBOSOMAL PROTEIN S2P >gi|7441131|pir||D72558 probable
ribosomal protein S2 APE1750 - Aeropyrum pernix (strain
K1) >gi|5105440|dbj|BAA80753.1| (AP000062) 205aa long
hypothetical 30S ribosomal protein S2 [Aeropyrum pernix]
Length = 205
Score = 215 bits (542), Expect = 3e-55
Identities = 102/192 (53%), Positives = 138/192 (71%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E LVP + Y AGV GTQ T+ M++F++R+ +G Y LD K DERL +A KFL+ F+
Sbjct: 7 ETLVPSELYRKAGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE 66
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P+ I VSVR+YGQKPV+ E G +AI GR +PGT TNP ++++ EPDV+++TDPR D
Sbjct: 67 PEKIAVVSVRIYGQKPVRMMCERVGCKAITGRIIPGTFTNPNLEHYVEPDVVVVTDPRMD 126
Query: 124 HQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
QA+ EA ++GIP+VALVDT+N + +DL IP NN+GR++LALIYWIL REIL RG +
Sbjct: 127 RQAVVEASKVGIPVVALVDTDNSIENIDLVIPANNRGRRSLALIYWILTREILRRRGVLK 186
Query: 184 SREEFKIPVEEF 195
E+ + EEF
Sbjct: 187 PDEDLDVSYEEF 198
>sp|Q01291|RS0_NEUCR 40S RIBOSOMAL PROTEIN S0 (RIBOSOME-ASSOCIATED PROTEIN 1)
>gi|11276889|pir||T47199 probable ribosome-associated
protein [imported] - Neurospora crassa
>gi|1039443|gb|AAB02772.1| (U36470) putative
ribosome-associated protein [Neurospora crassa]
Length = 293
Score = 170 bits (427), Expect = 9e-42
Identities = 85/179 (47%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
++Q LAA HIG++ M+ ++++ R DG+ +L+V KT E++ +A + +A D P I
Sbjct: 17 IEQLLAAQCHIGSKNLGVHMQPYLWKTRADGVNILNVGKTWEKIVLAARIIAAIDNPADI 76
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+S R GQ+ V KF TGA+AI GRF PG+ TN ++F EP +II+TDPR D QA+
Sbjct: 77 CVISARPIGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDAQAI 136
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSRE 186
KEA + IP++AL D ++ YVD+AIPTNNKGR A+A ++W+LARE+L RG I +RE
Sbjct: 137 KEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIACVWWMLAREVLRLRGTIYNRE 195
>pir||T40637 40s ribosomal protein s0 - fission yeast (Schizosaccharomyces
pombe) >gi|4538669|emb|CAB39363.1| (AL049474) 40s
ribosomal protein s0 [Schizosaccharomyces pombe]
Length = 292
Score = 169 bits (424), Expect = 2e-41
Identities = 82/176 (46%), Positives = 123/176 (69%), Gaps = 1/176 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ Q LAA HIG++ M ++++ R DG+++L++ KT E+L +A + +A + P +
Sbjct: 17 IKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIATIENPADV 76
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
VS R YG + V KF TGA AI GRF PG TN + + EP +I++TDPRAD QA+
Sbjct: 77 CVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADAQAI 136
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
KEA + IP++AL DT+++L++VD+AIPTNNKGRK++ LI+++LARE+L RG +S
Sbjct: 137 KEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLS 192
>sp|O80377|RSP4_DAUCA 40S RIBOSOMAL PROTEIN SA (P40) >gi|7441130|pir||T14281 P40-like
ribosomal protein - carrot >gi|3551245|dbj|BAA32821.1|
(AB012702) P40-like protein [Daucus carota]
Length = 297
Score = 164 bits (412), Expect = 5e-40
Identities = 78/183 (42%), Positives = 121/183 (65%), Gaps = 1/183 (0%)
Query: 14 AAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSV 72
AA VH+GT+ M++++++ R DG+Y++++ KT E+L +A + + + PQ I+ S
Sbjct: 20 AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSIENPQDIIVQSA 79
Query: 73 RLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIE 132
R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +KEA
Sbjct: 80 RPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAAL 139
Query: 133 IGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
IP +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG IS ++++ V
Sbjct: 140 GNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMV 199
Query: 193 EEF 195
+ F
Sbjct: 200 DLF 202
>sp|O22518|RSP4_SOYBN 40S RIBOSOMAL PROTEIN SA (P40) >gi|7441124|pir||T05733
ribosome-associated protein p40 - soybean
>gi|2444420|gb|AAB82659.1| (AF020553)
ribosome-associated protein p40 [Glycine max]
Length = 310
Score = 164 bits (411), Expect = 7e-40
Identities = 79/188 (42%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ LAA VH+GT+ M+++I++ R DG+Y++++ KT E+L++A + + + PQ I
Sbjct: 22 IQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDI 81
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+ S R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +
Sbjct: 82 IVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPI 141
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
KEA IP +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I +
Sbjct: 142 KEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLK 201
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 202 WDVMVDLF 209
>pir||S30570 laminin receptor homolog - Arabidopsis thaliana
>gi|16380|emb|CAA48794.1| (X69056) laminin receptor
homologue [Arabidopsis thaliana]
Length = 298
Score = 164 bits (410), Expect = 9e-40
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 14 AAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSV 72
AA VH+GT+ M++++++ R DG+Y+ ++ KT E+L++A + + + PQ I+ S
Sbjct: 24 AAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSA 83
Query: 73 RLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIE 132
R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +KE
Sbjct: 84 RPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGAL 143
Query: 133 IGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
IPI+A DT++ + +VD+ IP NNKG+ ++ ++W+LAR +L RG I++ +++ + V
Sbjct: 144 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMV 203
Query: 193 EEF 195
+ F
Sbjct: 204 DLF 206
>pir||A54860 p40 protein homolog - Arabidopsis thaliana
>gi|402904|gb|AAA53425.1| (U01955) laminin receptor-like
protein [Arabidopsis thaliana]
>gi|6730764|gb|AAF27153.1|AC016529_16 (AC016529)
putative 40S ribosomal protein SA (laminin receptor-like
protein); 68387-70081 [Arabidopsis thaliana]
Length = 298
Score = 164 bits (410), Expect = 9e-40
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 14 AAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSV 72
AA VH+GT+ M++++++ R DG+Y+ ++ KT E+L++A + + + PQ I+ S
Sbjct: 24 AAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSA 83
Query: 73 RLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIE 132
R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +KE
Sbjct: 84 RPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGAL 143
Query: 133 IGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
IPI+A DT++ + +VD+ IP NNKG+ ++ ++W+LAR +L RG I++ +++ + V
Sbjct: 144 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMV 203
Query: 193 EEF 195
+ F
Sbjct: 204 DLF 206
>sp|Q08682|RSP4_ARATH 40S RIBOSOMAL PROTEIN SA (P40) (LAMININ RECEPTOR HOMOLOG)
>gi|2129619|pir||S71247 ribosome-associated protein p40
homolog - Arabidopsis thaliana
>gi|1345503|emb|CAA61547.1| (X89366) 40kD protein
[Arabidopsis thaliana] >gi|2102657|emb|CAA71407.1|
(Y10379) unnamed protein product [Arabidopsis thaliana]
Length = 298
Score = 164 bits (410), Expect = 9e-40
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 14 AAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSV 72
AA VH+GT+ M++++++ R DG+Y+ ++ KT E+L++A + + + PQ I+ S
Sbjct: 24 AAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSA 83
Query: 73 RLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIE 132
R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +KE
Sbjct: 84 RPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGAL 143
Query: 133 IGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
IPI+A DT++ + +VD+ IP NNKG+ ++ ++W+LAR +L RG I++ +++ + V
Sbjct: 144 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMV 203
Query: 193 EEF 195
+ F
Sbjct: 204 DLF 206
>sp|Q01661|RS0_PNECA 40S RIBOSOMAL PROTEIN S0 (EXTRACELLULAR MATRIX RECEPTOR PROTEIN)
>gi|493057|gb|AAA52187.1| (U09451) extracellular matrix
receptor protein [Pneumocystis carinii]
Length = 295
Score = 162 bits (405), Expect = 4e-39
Identities = 79/180 (43%), Positives = 126/180 (69%), Gaps = 2/180 (1%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
++ ++A HIG++ M+ ++++ R DG++++++ K E+L +A + + + P I
Sbjct: 12 IEMLISANCHIGSRNCELRMEPYVFKRRADGVHIINLGKRWEKLILAARIIVTIENPTDI 71
Query: 68 LAVSVRLYGQKPVKKFGEVTGAR-AIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQA 126
+AVS R YGQ+ V K+ TGAR AI RF PG+ TN +++ EP +II+TDPR D QA
Sbjct: 72 IAVSSRSYGQRAVHKYALHTGAREAISSRFTPGSFTNYITRSYKEPRLIIVTDPRTDSQA 131
Query: 127 MKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSRE 186
+KEA + IP++AL DT++ L YVD+AIPTNNKGR ++ LI+W+LARE+L RG +++R+
Sbjct: 132 IKEASYVNIPVIALCDTDSPLQYVDVAIPTNNKGRHSIGLIWWMLAREVLRLRGTLANRD 191
>sp|P39478|RS2_SULAC 30S RIBOSOMAL PROTEIN S2P >gi|629410|pir||S47028 probable nucleic
acid-binding protein nbp1 - Sulfolobus acidocaldarius
(fragment) >gi|517295|emb|CAA56485.1| (X80194) putative
nucleic acid binding protein [Sulfolobus acidocaldarius]
Length = 154
Score = 162 bits (405), Expect = 4e-39
Identities = 77/127 (60%), Positives = 98/127 (76%)
Query: 4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD 63
E LVPLD YL+AGVHIGT T+ M++FIYRVR +GLYVLDVRK DERL+VA KF++RF
Sbjct: 28 ELLVPLDTYLSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISRFR 87
Query: 64 PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRAD 123
P+++L V+ R Y PV+KF EV + I GRF PGT+TNP + N+ EP+V+I+TDPR D
Sbjct: 88 PEAVLTVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTNPYLDNYIEPEVLIVTDPRTD 147
Query: 124 HQAMKEA 130
Q +KEA
Sbjct: 148 LQVIKEA 154
>gb|AAC97937.1| (AF097522) laminin receptor-like protein [Brassica napus]
Length = 292
Score = 162 bits (405), Expect = 4e-39
Identities = 76/183 (41%), Positives = 119/183 (64%), Gaps = 1/183 (0%)
Query: 14 AAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSV 72
AA VH+GT+ M++++++ R DG+Y+ ++ KT E+L +A + + + PQ I+ S
Sbjct: 21 AAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVAIENPQDIIVQSA 80
Query: 73 RLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIE 132
R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +KE
Sbjct: 81 RPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGAL 140
Query: 133 IGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPV 192
IPI+A DT++ + +VD+ IP NNKG+ ++ ++W+LAR +L RG I +++ + V
Sbjct: 141 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMV 200
Query: 193 EEF 195
+ F
Sbjct: 201 DLF 203
>sp|P38980|RSP4_TRIGR 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LAMININ BINDING PROTEIN)
>gi|476090|gb|AAA90977.1| (U02371) 34/67 kD laminin
binding protein [Tripneustes gratilla]
Length = 316
Score = 161 bits (403), Expect = 6e-39
Identities = 75/176 (42%), Positives = 118/176 (66%), Gaps = 1/176 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ ++LA+G HIG+ M +++Y+ + DG Y++++R+T E+L +A + + + P +
Sbjct: 15 VQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARIIVAIENPADV 74
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+S R YGQ+ V KFG TGA I GR+ PGT TN F EP ++I+TDPR+DHQ +
Sbjct: 75 CVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPV 134
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIS 183
EA + IP++AL +T++ L YVD+AIP NNK ++ L++W+L+RE+L RG IS
Sbjct: 135 TEASYVNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAIS 190
>sp|O65751|RSP4_CICAR 40S RIBOSOMAL PROTEIN SA (P40) >gi|3204099|emb|CAA07226.1|
(AJ006759) ribosome-associated protein p40 [Cicer
arietinum]
Length = 300
Score = 161 bits (403), Expect = 6e-39
Identities = 77/188 (40%), Positives = 121/188 (63%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ LAA VH+GT+ M+++I++ R DG+Y++++ KT ++L +A + + + Q I
Sbjct: 18 IQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIVAIENSQDI 77
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+ S R YGQ+ V KF + TGA AI GR PGT TN +F EP ++I+TDPR DHQ +
Sbjct: 78 IVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPI 137
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
KEA IP +A DT++ ++YVD+ IP NNKG+ ++ ++W+LAR +L RG I +
Sbjct: 138 KEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLK 197
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 198 WDVMVDLF 205
>gi|11427321 similar to laminin receptor 1 (67kD, ribosomal protein SA) (H.
sapiens) [Homo sapiens]
Length = 295
Score = 161 bits (403), Expect = 6e-39
Identities = 75/181 (41%), Positives = 120/181 (65%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F+EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFWEPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>emb|CAA43469.1| (X61156) laminin-binding protein [Homo sapiens]
Length = 285
Score = 161 bits (402), Expect = 8e-39
Identities = 76/181 (41%), Positives = 119/181 (64%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L VA + + + P +
Sbjct: 7 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLVAARAIVAIENPADVSV 66
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 67 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 126
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 127 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 186
Query: 190 I 190
+
Sbjct: 187 V 187
>sp|P50890|RSP4_CHICK 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KDA LAMININ RECEPTOR) (37LRP)
>gi|1149509|emb|CAA64147.1| (X94368) 37kD Laminin
receptor precursor /p40 ribosomal associated protein
[Gallus gallus]
Length = 296
Score = 160 bits (401), Expect = 1e-38
Identities = 76/181 (41%), Positives = 119/181 (64%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + IP +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>pir||A56880 laminin receptor, 67K - human >gi|250127|gb|AAB22299.1| (S37431) 67
kda laminin receptor [human, lung cancer cell line SBC3,
Peptide, 295 aa] [Homo sapiens]
Length = 295
Score = 159 bits (399), Expect = 2e-38
Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>gi|8393693 laminin receptor 1 [Rattus norvegicus]
>gi|730681|sp|P38983|RSP4_RAT 40S RIBOSOMAL PROTEIN SA
(P40) (34/67 KD LAMININ RECEPTOR)
>gi|466439|dbj|BAA04953.1| (D25224) 40kDa ribosomal
protein [Rattus norvegicus] >gi|741364|prf||2007254A
ribosomal protein S2 [Rattus norvegicus]
Length = 295
Score = 159 bits (399), Expect = 2e-38
Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>pir||S42405 ribosomal protein RS.40K, cytosolic [validated] - rat
Length = 295
Score = 159 bits (399), Expect = 2e-38
Identities = 77/181 (42%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFDPQSI-LA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A +A +P + +A
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLARAIVAIENPADVSVA 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVIKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>emb|CAB92099.1| (AL356333) 40s ribosomal protein s0B [Schizosaccharomyces pombe]
Length = 287
Score = 159 bits (399), Expect = 2e-38
Identities = 78/179 (43%), Positives = 122/179 (67%), Gaps = 1/179 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVS 71
LAA HIG++ M+ ++++ R DG++++++ KT E+L +A + +A + P + +S
Sbjct: 22 LAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIATIENPADVCVIS 81
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R YG + V KF TGA AI GRF PG TN + + EP +II+TDPRAD QA+KEA
Sbjct: 82 SRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTDPRADAQAIKEAS 141
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKI 190
+ IP++AL DT+++L++VD+AIP NNKG K++ L +++LARE+L RG IS +++
Sbjct: 142 FVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEV 200
>gi|6754968 P40-8, functional [Mus musculus] >gi|91035|pir||A29395 ribosomal
protein RS.40K - mouse >gi|52853|emb|CAA29696.1|
(X06406) protein p40 (AA 1 - 295) [Mus musculus]
>gi|4633839|gb|AAD26866.1|AF140348_1 (AF140348) 37kDa
oncofetal antigen [Mus musculus]
>gi|228997|prf||1815216A laminin receptor [Cricetinae
gen. sp.]
Length = 295
Score = 159 bits (399), Expect = 2e-38
Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>gi|9845502 laminin receptor 1; Laminin receptor-1 (67kD); 67kD, ribosomal
protein SA [Homo sapiens]
>gi|125969|sp|P08865|RSP4_HUMAN 40S RIBOSOMAL PROTEIN SA
(P40) (34/67 KDA LAMININ RECEPTOR) (COLON CARCINOMA
LAMININ-BINDING PROTEIN) (NEM/1CHD4)
>gi|86715|pir||A31233 ribosomal protein RS.40K,
cytosolic - human >gi|307105|gb|AAA36161.1| (J03799)
laminin-binding protein [Homo sapiens]
>gi|1302648|gb|AAC50652.1| (U43901) 37 kD laminin
receptor precursor/p40 ribosome associated protein [Homo
sapiens]
Length = 295
Score = 159 bits (399), Expect = 2e-38
Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>prf||1405340A protein 40kD [Mus musculus]
Length = 295
Score = 159 bits (399), Expect = 2e-38
Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>gb|AAB67866.1| (U66223) p40 protein homolog [Arabidopsis thaliana]
>gi|6175177|gb|AAF04903.1|AC011437_18 (AC011437)
putative 40S ribosomal protein [Arabidopsis thaliana]
Length = 280
Score = 159 bits (398), Expect = 2e-38
Identities = 72/188 (38%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ L+A VH+GT+ M++++++ R DG+Y++++ KT ++L++A + + + P+ I
Sbjct: 20 IQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDI 79
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+ S R YGQ+ V KF + TG AI GR PGT TN +F EP ++I+TDPR DHQ +
Sbjct: 80 IVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPI 139
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
KE IP +A DT++ + +VD+ IP NNKG+ ++ ++W+LAR +L RG I + ++
Sbjct: 140 KEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQK 199
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 200 WDVMVDLF 207
>sp|P14206|RSP4_MOUSE 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LAMININ RECEPTOR)
>gi|91034|pir||A30317 laminin receptor - mouse
>gi|293694|gb|AAA39413.1| (J02870) laminin receptor [Mus
musculus]
Length = 295
Score = 159 bits (397), Expect = 3e-38
Identities = 75/179 (41%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVS 71
LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P + +S
Sbjct: 19 LAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVIS 78
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + EA
Sbjct: 79 SRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEAS 138
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKI 190
+ +P +AL +T++ L+YVD+AIP NNKG ++ L++W+LARE+L RG IS +++
Sbjct: 139 YVNLPTIALCNTDSPLAYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEV 197
>sp|P26452|RSP4_BOVIN 40S RIBOSOMAL PROTEIN P40 (C10 PROTEIN) >gi|108483|pir||A38464 33K
laminin receptor homolog - bovine
>gi|163303|gb|AAA62713.1| (M64923) C10 protein [Bos
taurus]
Length = 295
Score = 157 bits (394), Expect = 7e-38
Identities = 74/181 (40%), Positives = 118/181 (64%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PG TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>sp|P38981|RSP4_URECA 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LAMININ BINDING PROTEIN)
>gi|476088|gb|AAA90978.1| (U02370) 34/67 kD laminin
binding protein [Urechis caupo]
Length = 317
Score = 157 bits (394), Expect = 7e-38
Identities = 77/186 (41%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LA H+G M++++Y+ R DG +++VRKT E++ +A + +A + P I
Sbjct: 17 KFLACASHLGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAARAIAAIENPADICV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R YGQ+ V KF TGA I GRF PGT TN F EP ++++TDP DHQ + E
Sbjct: 77 ISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTAFREPRLLVVTDPYTDHQPVTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + IP++AL +T++ L YVD+AIP NNK ++ L++W+LARE+L RG IS ++
Sbjct: 137 ASYVNIPVIALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWE 196
Query: 190 IPVEEF 195
+ V+ F
Sbjct: 197 VMVDLF 202
>sp|P46769|RSP4_CAEEL PROBABLE 40S RIBOSOMAL PROTEIN SA (P40) >gi|7494910|pir||T18742
hypothetical protein B0393.1 - Caenorhabditis elegans
>gi|3873741|emb|CAA86061.1| (Z37983) contains similarity
to Pfam domain: PF00318 (Ribosomal protein S2),
Score=329.1, E-value=1.6e-95, N=1~cDNA EST CEMSA13F
comes from this gene; cDNA EST CEMSE79F comes from this
gene~cDNA EST CEMSB26R comes from this gene; cDNA EST
EMBL:T01373 c>
Length = 276
Score = 157 bits (394), Expect = 7e-38
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVS 71
LA H+G+ M++++Y+ R DG +++V+KT E+L +A + +A + P ++ VS
Sbjct: 19 LATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVS 78
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R Y Q+ + KF TGA AI GRF PG +TN K F EP +++I+DPR DHQA+ EA
Sbjct: 79 ARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEAS 138
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIP 191
+G+P+++ V+TE+ L +D+ +P NNKG +++ L++W+LAREIL RG+IS + F +
Sbjct: 139 YVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLE 198
Query: 192 VEE 194
+E
Sbjct: 199 GKE 201
>sp|P38982|RSP4_CRIGR 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LAMININ RECEPTOR)
>gi|423351|pir||S33438 laminin receptor, 34/67K -
Chinese hamster >gi|289984|gb|AAB46394.1| (L16589) 33
kDa protein [Cricetulus griseus]
>gi|298088|emb|CAA80434.1| (Z22749) 34/67 kDa laminin
receptor [Cricetulus griseus]
Length = 295
Score = 157 bits (393), Expect = 9e-38
Identities = 74/181 (40%), Positives = 118/181 (64%), Gaps = 1/181 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R GQ+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + E
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+ RG IS ++
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWE 196
Query: 190 I 190
+
Sbjct: 197 V 197
>sp|P38984|RSP4_CHLVR 40S RIBOSOMAL PROTEIN SA (P40) (33 KD LAMININ BINDING PROTEIN)
>gi|283509|pir||S25417 laminin-binding protein homolog -
Chlorohydra viridissima >gi|7128|emb|CAA45333.1|
(X63849) homologous to laminin binding protein
[Chlorohydra viridissima]
Length = 293
Score = 157 bits (392), Expect = 1e-37
Identities = 75/186 (40%), Positives = 124/186 (66%), Gaps = 1/186 (0%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAGVH+G+ + ++++ + DG++++++RKT E+L +A + +A + P +
Sbjct: 17 KFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAARIIASIENPADVCV 76
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
+S R YG + V KF + TGA I GRF PGT TN K F EP ++I TDP+ D+QA+ E
Sbjct: 77 ISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTNQIQKRFREPRLLISTDPQHDNQALTE 136
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFK 189
A + IP++AL +T++ L +VD AIP NN+G +++ ++WILARE+L+ RG IS + +
Sbjct: 137 ASYVNIPVIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWN 196
Query: 190 IPVEEF 195
+ + F
Sbjct: 197 VMPDLF 202
>emb|CAB77627.1| (AJ251858) YST1 protein [Candida albicans]
Length = 261
Score = 156 bits (391), Expect = 2e-37
Identities = 77/174 (44%), Positives = 115/174 (65%), Gaps = 1/174 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFDPQSILAV-S 71
LAA VH+G + K ++Y+ R DG+ ++++ KT E++ +A + +A S +AV S
Sbjct: 18 LAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCS 77
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R +GQ+ V KF TGA AI GRF PG TN ++F EP ++++TDPR D QA+KE+
Sbjct: 78 SRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESS 137
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSR 185
+ IP++AL D ++ YVD+AIP NNKG+ ++ LI+W+LARE+L RG I R
Sbjct: 138 YVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDR 191
>sp|O42817|RS0_CANAL 40S RIBOSOMAL PROTEIN S0 >gi|2910999|emb|CAA72242.1| (Y11434) YST
protein [Candida albicans]
Length = 253
Score = 156 bits (390), Expect = 2e-37
Identities = 77/174 (44%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFDPQSILAV-S 71
LAA VH+G + K ++Y+ R DG+ ++++ KT E++ +A + +A S +AV S
Sbjct: 18 LAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCS 77
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R +GQ+ V KF TGA AI GRF PG TN ++F EP ++++TDPR D QA+KE+
Sbjct: 78 SRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESS 137
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSR 185
+ IP++AL D ++ YVD+AIP NNKG+ + LI+W+LARE+L RG I R
Sbjct: 138 YVNIPVIALTDMQSPSEYVDVAIPCNNKGKHCIGLIWWLLAREVLRLRGIIPDR 191
>gi|6323077 Ribosomal protein S0B; Rps0bp [Saccharomyces cerevisiae]
>gi|1171635|sp|P46654|RS0B_YEAST 40S RIBOSOMAL PROTEIN
S0-B (NUCLEIC ACID-BINDING PROTEIN NAB1B)
>gi|1363810|pir||S59364 ribosomal protein S1.e.B,
cytosolic - yeast (Saccharomyces cerevisiae)
>gi|1002792|gb|AAC49276.1| (U33756) Yst2p [Saccharomyces
cerevisiae] >gi|1181269|emb|CAA64295.1| (X94607) nucleic
acid binding protein [Saccharomyces cerevisiae]
>gi|1370302|emb|CAA97578.1| (Z73220) ORF YLR048w
[Saccharomyces cerevisiae]
Length = 252
Score = 155 bits (389), Expect = 3e-37
Identities = 74/176 (42%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARF-DPQSILAVS 71
LAA H+G + + +++ R DG++V++V KT E+L +A + +A +P+ ++A+S
Sbjct: 18 LAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAIS 77
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R YGQ+ V KF TGA I GRF PG+ TN ++F EP ++I+TDPR D QA+KEA
Sbjct: 78 SRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEAS 137
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
+ IP++AL D ++ +VD+AIP NN+G+ ++ LI+++LARE+L RG + R +
Sbjct: 138 YVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQ 193
>gi|6321653 Ribosomal protein S0A; Rps0ap [Saccharomyces cerevisiae]
>gi|417336|sp|P32905|RS0A_YEAST 40S RIBOSOMAL PROTEIN
S0-A (NUCLEIC ACID-BINDING PROTEIN NAB1A)
>gi|539303|pir||S42143 ribosomal protein S1.e.A,
cytosolic - yeast (Saccharomyces cerevisiae)
>gi|172026|gb|AAB05643.1| (M88277) nucleic acid-binding
protein [Saccharomyces cerevisiae]
>gi|1323385|emb|CAA97241.1| (Z72999) ORF YGR214w
[Saccharomyces cerevisiae]
Length = 252
Score = 155 bits (387), Expect = 5e-37
Identities = 73/176 (41%), Positives = 119/176 (67%), Gaps = 1/176 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARF-DPQSILAVS 71
LAA H+G + + +++ R DG++V++V KT E+L +A + +A +P+ ++A+S
Sbjct: 18 LAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAIS 77
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R +GQ+ V KF TGA I GRF PG+ TN ++F EP ++I+TDPR+D QA+KEA
Sbjct: 78 SRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEAS 137
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
+ IP++AL D ++ +VD+AIP NN+G+ ++ LI+++LARE+L RG + R +
Sbjct: 138 YVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQ 193
>emb|CAA33112.1| (X15005) pot. lamimin-binding protein (AA 1 - 300) [Homo sapiens]
Length = 300
Score = 153 bits (383), Expect = 1e-36
Identities = 75/186 (40%), Positives = 119/186 (63%), Gaps = 6/186 (3%)
Query: 11 QYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILA 69
++LAAG H+G M+++IY+ + DG+Y++++++T E+L +A + + + P +
Sbjct: 17 KFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSV 76
Query: 70 VSVRLYGQ-----KPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADH 124
+S R GQ + V KF TGA I GRF PGT TN F EP ++++TDPRADH
Sbjct: 77 ISSRNTGQVCGTVRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADH 136
Query: 125 QAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISS 184
Q + EA + +P +AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS
Sbjct: 137 QPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISR 196
Query: 185 REEFKI 190
+++
Sbjct: 197 EHPWEV 202
>gb|AAD30064.1|AF133210_1 (AF133210) laminin receptor precursor-like protein/ p40 ribosome
associated-like protein [Trypanosoma cruzi]
Length = 298
Score = 153 bits (383), Expect = 1e-36
Identities = 71/188 (37%), Positives = 120/188 (63%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ + +A H GT+ ++ MKK+I+ ++G ++D+ T E+L +A + +A + PQ +
Sbjct: 35 VQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQDV 94
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
S RL+GQ+ + KF ++ G + GRF+PGT TN K F +P V+++TDPR D QA
Sbjct: 95 TVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTDQQAF 154
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
+EA + IP++A DT+ L +VD+AIP N++ R +++++YW+LARE+L RG I
Sbjct: 155 REASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVP 214
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 215 WDVKVDLF 222
>sp|P38979|RSP4_DROME 40S RIBOSOMAL PROTEIN SA (P40) (STUBARISTA PROTEIN) (LAMININ
RECEPTOR HOMOLOG) (K14) >gi|7441125|pir||T13602
ribosome-associated protein p40 - fruit fly (Drosophila
melanogaster) >gi|158031|gb|AAA28741.1| (M90422) p40
[Drosophila melanogaster] >gi|3292889|emb|CAA19839.1|
(AL031027) EST embl|AA948882|AA948882 comes from 5' UTR
[Drosophila melanogaster]
Length = 270
Score = 150 bits (375), Expect = 1e-35
Identities = 72/188 (38%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ + L A H+G++ M++++Y+ R DG+ +L++ KT E+L++A + + D P I
Sbjct: 15 ITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDI 74
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+S R GQ+ V KF + T I GRF PG TN F EP ++++TDP DHQ +
Sbjct: 75 FVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPI 134
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
EA + IP++A +T++ L Y+D+AIP NNK ++ L++W+LARE+L RG IS E
Sbjct: 135 MEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVE 194
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 195 WPVVVDLF 202
>pir||S52593 ribosome-associated protein p40 - fruit fly (Drosophila
melanogaster)
Length = 270
Score = 150 bits (375), Expect = 1e-35
Identities = 72/188 (38%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ + L A H+G++ M++++Y+ R DG+ +L++ KT E+L++A + + D P I
Sbjct: 15 ITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDI 74
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+S R GQ+ V KF + T I GRF PG TN F EP ++++TDP DHQ +
Sbjct: 75 FVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPI 134
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
EA + IP++A +T++ L Y+D+AIP NNK ++ L++W+LARE+L RG IS E
Sbjct: 135 MEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVE 194
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 195 WPVVVDLF 202
>gb|AAF45638.1| (AE003421) sta gene product [Drosophila melanogaster]
Length = 330
Score = 150 bits (375), Expect = 1e-35
Identities = 72/188 (38%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Query: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67
+ + L A H+G++ M++++Y+ R DG+ +L++ KT E+L++A + + D P I
Sbjct: 102 ITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDI 161
Query: 68 LAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAM 127
+S R GQ+ V KF + T I GRF PG TN F EP ++++TDP DHQ +
Sbjct: 162 FVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPI 221
Query: 128 KEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
EA + IP++A +T++ L Y+D+AIP NNK ++ L++W+LARE+L RG IS E
Sbjct: 222 MEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVE 281
Query: 188 FKIPVEEF 195
+ + V+ F
Sbjct: 282 WPVVVDLF 289
>gb|AAA28667.1| (M77133) laminin receptor [Drosophila melanogaster]
Length = 253
Score = 150 bits (374), Expect = 2e-35
Identities = 72/184 (39%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVS 71
L A H+G++ M++++Y+ R DG+ +L++ KT E+L++A + + D P I +S
Sbjct: 2 LVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVIS 61
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
R GQ+ V KF + T I GRF PG TN F EP ++++TDP DHQ + EA
Sbjct: 62 SRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEAS 121
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIP 191
+ IP++A +T++ L Y+D+AIP NNK ++ L++W+LARE+L RG IS E+ +
Sbjct: 122 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 181
Query: 192 VEEF 195
V+ F
Sbjct: 182 VDLF 185
>sp|P46771|RSP4_STRPU 40S RIBOSOMAL PROTEIN SA (P40) (34/67 KD LAMININ BINDING PROTEIN)
>gi|476086|gb|AAA90976.1| (U02369) 34/67 kD laminin
binding protein [Strongylocentrotus purpuratus]
Length = 264
Score = 118 bits (294), Expect = 4e-26
Identities = 57/123 (46%), Positives = 84/123 (67%)
Query: 71 SVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEA 130
S R YGQ+ V KFG TGA + GR+ PGT TN F EP ++I+TDPR+DHQ + EA
Sbjct: 1 SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEA 60
Query: 131 IEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKI 190
+ IP++AL ++++ L +VD+AIP NNK ++ L++W+L+RE+L RG IS ++I
Sbjct: 61 SYVNIPVIALCNSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEI 120
Query: 191 PVE 193
V+
Sbjct: 121 MVD 123
>sp|P46770|RSP4_ECHGR 40S RIBOSOMAL PROTEIN SA (P40) (LAMININ-BINDING PROTEIN)
>gi|495775|gb|AAB68315.1| (L33460) laminin-binding
protein [Echinococcus granulosus]
Length = 268
Score = 118 bits (293), Expect = 5e-26
Identities = 55/164 (33%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVS 71
+AA VH+G+ M++++Y +G +++ + KT E+L +A + + + P ++ +
Sbjct: 19 VAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIG 78
Query: 72 VRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAI 131
+ Q+ KFG TG ++PGRF PG TN F EP ++I+ DP+ DHQ ++E
Sbjct: 79 GQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGDHQPVREGS 138
Query: 132 EIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREI 175
+ IP++ +T++ L VD+ IP NN + ++AL+ W+LARE+
Sbjct: 139 AVNIPVIGFCNTDSPLQCVDIGIPCNN-DKYSIALMLWMLAREV 181
>gb|AAC50313.1| (U36484) laminin-binding protein [Homo sapiens]
Length = 125
Score = 116 bits (287), Expect = 2e-25
Identities = 54/113 (47%), Positives = 76/113 (66%)
Query: 78 KPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIEIGIPI 137
+ V KF TGA I GRF PGT TN F EP ++++TDPRADHQ + EA + +P
Sbjct: 1 RAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPT 60
Query: 138 VALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKI 190
+AL +T++ L YVD+AIP NNKG ++ L++W+LARE+L RG IS +++
Sbjct: 61 IALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEV 113
>dbj|BAA21994.1| (AB002752) ribosomal protein SA (P40) / laminin receptor [Entamoeba
histolytica]
Length = 172
Score = 115 bits (284), Expect = 5e-25
Identities = 56/157 (35%), Positives = 95/157 (59%), Gaps = 3/157 (1%)
Query: 42 VLDVRKTDERLKVAGKFLARFD---PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLP 98
+ ++ KT E+L +A + +A P ++AV+ R + KF + TG A+ GRF P
Sbjct: 4 IFNLMKTWEKLSLAARVIAGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTP 63
Query: 99 GTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNN 158
G+ TN K F EP +II++DP DHQA++E+ I +P + +++N L V + IP NN
Sbjct: 64 GSFTNQIQKKFMEPRLIIVSDPSVDHQALRESGYINVPTIGFCNSDNSLKNVGIVIPCNN 123
Query: 159 KGRKALALIYWILAREILYNRGEISSREEFKIPVEEF 195
+ R ++ L++W+L REIL +G++ E++ + V+ F
Sbjct: 124 RSRLSIGLMWWMLTREILRYQGKLVRDEKWDVMVDLF 160
>dbj|BAA21980.1| (AB002730) ribosomal protein SA (P40) / laminin receptor [Entamoeba
histolytica]
Length = 173
Score = 96.7 bits (237), Expect = 2e-19
Identities = 50/146 (34%), Positives = 82/146 (55%), Gaps = 3/146 (2%)
Query: 13 LAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD---PQSILA 69
+A VHIG M++++Y + + ++ KT E+L +A + +A P ++A
Sbjct: 28 VACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVIAGISNETPSDVVA 87
Query: 70 VSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKE 129
V+ R + KF + TG A+ GRF PG+ TN K F EP +II++DP DHQA++E
Sbjct: 88 VAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSDPSVDHQALRE 147
Query: 130 AIEIGIPIVALVDTENLLSYVDLAIP 155
+ I +P + +++N L V +AIP
Sbjct: 148 SGYINVPTIGFWNSDNRLKNVGIAIP 173
>emb|CAB57256.1| (AJ270229) hypothetical protein [Entodinium caudatum]
Length = 163
Score = 88.5 bits (216), Expect = 5e-17
Identities = 37/98 (37%), Positives = 67/98 (67%), Gaps = 4/98 (4%)
Query: 90 RAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSY 149
+A+ GR+ PG +TN K + EP ++I++DPR D+ A+ E+ + +P++A+ +++N+L Y
Sbjct: 1 QAVTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKY 60
Query: 150 VDLAIPTNNKGRKALALIYWILAREILYNRGEISSREE 187
VD AIP NN+ ++A+I+++L + +L EI EE
Sbjct: 61 VDCAIPCNNRNNYSIAMIWYLLTKAVL----EIKKEEE 94
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.141 0.400
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72646368
Number of Sequences: 2977
Number of extensions: 2924984
Number of successful extensions: 5803
Number of sequences better than 1.0e-10: 57
Number of HSP's better than 0.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 57
length of query: 202
length of database: 189,106,746
effective HSP length: 54
effective length of query: 148
effective length of database: 156,788,448
effective search space: 23204690304
effective search space used: 23204690304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 163 (67.9 bits)