BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0373 (argB-like) DE:acetylglutamate kinase, putative
(254 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75173 probable acetylglutamate kinase PAB0373 - Pyrococcus... 499 e-140
pir||G71041 hypothetical protein PH1623 - Pyrococcus horikoshii ... 396 e-109
sp|Q60352|Y044_METJA HYPOTHETICAL PROTEIN MJ0044 >gi|2127990|pir... 132 4e-30
pir||E69161 conserved hypothetical protein MTH47 - Methanobacter... 125 6e-28
gi|11499869 acetylglutamate kinase, putative [Archaeoglobus fulg... 113 2e-24
emb|CAC11251.1| (AL445063) gamma-glutamyl kinase related protein... 102 4e-21
pir||S75424 hypothetical protein c05007 - Sulfolobus solfataricu... 92 6e-18
gb|AAK40425.1| Conserved hypothetical protein [Sulfolobus solfat... 92 6e-18
gb|AAF87047.1|AC006535_25 (AC006535) T24P13.2 [Arabidopsis thali... 90 2e-17
gb|AAG19530.1| (AE005044) ornithine carbamoyltransferase; ArgB [... 83 3e-15
pir||F72560 hypothetical protein APE1768 - Aeropyrum pernix (str... 77 2e-13
pir||S44936 phosphotransferase - Pseudomonas syringae >gi|485965... 69 4e-11
>pir||A75173 probable acetylglutamate kinase PAB0373 - Pyrococcus abyssi
(strain Orsay) >gi|5457974|emb|CAB49464.1| (AJ248284)
acetylglutamate kinase, putative [Pyrococcus abyssi]
Length = 254
Score = 499 bits (1271), Expect = e-140
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MIIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFRI 60
MIIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFRI
Sbjct: 1 MIIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFRI 60
Query: 61 REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL 120
REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL
Sbjct: 61 REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL 120
Query: 121 TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF 180
TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF
Sbjct: 121 TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF 180
Query: 181 PGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRLS 240
PGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRLS
Sbjct: 181 PGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRLS 240
Query: 241 MAIVGNGIGTVVQS 254
MAIVGNGIGTVVQS
Sbjct: 241 MAIVGNGIGTVVQS 254
>pir||G71041 hypothetical protein PH1623 - Pyrococcus horikoshii
>gi|3258052|dbj|BAA30735.1| (AP000006) 254aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 254
Score = 396 bits (1007), Expect = e-109
Identities = 191/252 (75%), Positives = 225/252 (88%)
Query: 1 MIIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFRI 60
MII+KIGGSVLS+K+++F FR VVK IAYEISRF+PEEKFIVVHGGGSFGHPLA++F I
Sbjct: 1 MIIIKIGGSVLSDKKRKFHFRETVVKSIAYEISRFFPEEKFIVVHGGGSFGHPLAKEFAI 60
Query: 61 REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL 120
REGL+ Y SRHGF++THLAMLEL KV + FL+N LPAFPISSSSIF+T+ G+IV +
Sbjct: 61 REGLRDYSSRHGFVLTHLAMLELTKKVAQSFLDNMLPAFPISSSSIFITENGRIVKGYMD 120
Query: 121 TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF 180
VKEALS++FIPLLFGDVSFD +KGIEIVSGDEI+LHLAKEF+PEKVIFLMDVDG+YD+F
Sbjct: 121 VVKEALSREFIPLLFGDVSFDEAKGIEIVSGDEIVLHLAKEFKPEKVIFLMDVDGVYDKF 180
Query: 181 PGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRLS 240
PGG+LIE + +KEI ++L GSSGIDVTGGI+KKLEVA E+V+Y+ EVWFVNGL+KDRLS
Sbjct: 181 PGGRLIEFMKAKEISELTLEGSSGIDVTGGIRKKLEVAGEIVKYSKEVWFVNGLIKDRLS 240
Query: 241 MAIVGNGIGTVV 252
AIVGNGIGTVV
Sbjct: 241 RAIVGNGIGTVV 252
>sp|Q60352|Y044_METJA HYPOTHETICAL PROTEIN MJ0044 >gi|2127990|pir||D64305 hypothetical
protein homolog MJ0044 - Methanococcus jannaschii
>gi|1590842|gb|AAB98024.1| (U67462) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 260
Score = 132 bits (329), Expect = 4e-30
Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 19/263 (7%)
Query: 1 MIIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISR---FYPEE----KFIVVHGGGSFGHP 53
+ I+K+GGS+LS+K +S + D ++RIA EI +Y + K I+VHGGG+FGHP
Sbjct: 2 LTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHP 61
Query: 54 LARKF-RIREGLKGY-GSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKE 111
+A+K+ +I +G K + GF AM + + +PA I SS V +
Sbjct: 62 VAKKYLKIEDGKKIFINMEKGFWEIQRAMRRFNNIIIDTLQSYDIPAVSIQPSSFVVFGD 121
Query: 112 GKIVASSLLTVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLM 171
I +S +KE L ++ +P++ GD+ D G I+SGD+I+ +LA E + + +++
Sbjct: 122 KLIFDTS--AIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYAT 179
Query: 172 DVDGIYDRFPGGKLIERLTSKEIESM--SLSGSSGIDVTGGIKKKLEVARELVRYTNEVW 229
DVDG+ K I+R+ I + LSGS+ IDVTGG+K K+++ R + +
Sbjct: 180 DVDGV---LIDNKPIKRIDKNNIYKILNYLSGSNSIDVTGGMKYKIDMIR---KNKCRGF 233
Query: 230 FVNGLVKDRLSMAIVGNGIGTVV 252
NG + + A++G GT +
Sbjct: 234 VFNGNKANNIYKALLGEVEGTEI 256
>pir||E69161 conserved hypothetical protein MTH47 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621082|gb|AAB84554.1| (AE000796) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 266
Score = 125 bits (310), Expect = 6e-28
Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 13/259 (5%)
Query: 1 MIIVKIGGSVLSNK-RKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFR 59
MII+K+GGSV++ K +E + D ++RIA EI P ++VHG GSFGHP A ++R
Sbjct: 1 MIILKLGGSVITRKDSEEPAIDRDNLERIASEIGNASPSS-LMIVHGAGSFGHPFAGEYR 59
Query: 60 IREGLKGYGS----RHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIV 115
I ++ R GF +T + +L S V L +PA + S+ G+I
Sbjct: 60 IGSEIENEEDLRRRRFGFALTQNWVKKLNSHVCDALLAEGIPAVSMQPSAFIRAHAGRIS 119
Query: 116 ASSLLTVKEALSKDFIPLLFGDVSFDTSKGIE--IVSGDEIILHLAKEFRPEKVIFLMDV 173
+ + ++ L + +P+++GDV D+ + ++ ++SGD++I H + PE+VI DV
Sbjct: 120 HADISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDV 179
Query: 174 DGIYDR----FPGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVW 229
DG+Y R P +L++ + S + + SL G+ DVTGG+ K+ L E
Sbjct: 180 DGVYTRNPKKHPDARLLDVIGSLD-DLESLDGTLNTDVTGGMVGKIRELLLLAEKGVESE 238
Query: 230 FVNGLVKDRLSMAIVGNGI 248
+N V + A++G +
Sbjct: 239 IINAAVPGNIERALLGEEV 257
>gi|11499869 acetylglutamate kinase, putative [Archaeoglobus fulgidus]
>gi|7482891|pir||H69535 acetylglutamate kinase homolog -
Archaeoglobus fulgidus >gi|2648231|gb|AAB88966.1|
(AE000946) acetylglutamate kinase, putative
[Archaeoglobus fulgidus]
Length = 240
Score = 113 bits (280), Expect = 2e-24
Identities = 86/255 (33%), Positives = 129/255 (49%), Gaps = 31/255 (12%)
Query: 3 IVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEE--KFIVVHGGGSFGHPLARKFRI 60
I+KIGGSV+++K + + + +R E+ R E+ IVVHG GSFGHP +KF
Sbjct: 10 ILKIGGSVITDKSRGAFEK--LKERELREVCRAISEKWRNLIVVHGAGSFGHPHVKKF-- 65
Query: 61 REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL 120
GL G+ HL L L+ + E +PA+PI +A S+
Sbjct: 66 --GLSPLGASK----VHLGCLRLSERFCSVLTEFEVPAYPIHP----------FLAYSVE 109
Query: 121 TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF 180
V +A+ F+P+L GDV ++ IE++SGD+I+ HLA+ F+ EK+ F DV+G+YD
Sbjct: 110 IVDKAMKSGFLPVLHGDVVM--AEKIEVLSGDDIVAHLAEAFKAEKIGFATDVEGVYDF- 166
Query: 181 PGGKLIERLTSKEIESMSLSG---SSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKD 237
G +I+RL +E M G DVTGG+ +KL+ E+ F +
Sbjct: 167 -NGNVIDRLDRSLLEEMIAKGGVAKGKEDVTGGMLRKLQKLYEMGHGCKAYVFKGNY--E 223
Query: 238 RLSMAIVGNGIGTVV 252
L + G +GT V
Sbjct: 224 NLKKFLQGEKVGTEV 238
>emb|CAC11251.1| (AL445063) gamma-glutamyl kinase related protein [Thermoplasma
acidophilum]
Length = 245
Score = 102 bits (252), Expect = 4e-21
Identities = 80/254 (31%), Positives = 129/254 (50%), Gaps = 10/254 (3%)
Query: 1 MIIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFRI 60
M+I+KIGGSV+++K + R ++ I +S E+ VVHGGGSFGH A +F +
Sbjct: 1 MMILKIGGSVITDKSAYRTARTYAIRSIVKVLSGI--EDLVCVVHGGGSFGHIKAMEFGL 58
Query: 61 REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL 120
G K S G+ + H M L V +E + PIS + +G+ + L+
Sbjct: 59 -PGPKNPRSSIGYSIVHRDMENLDLMVIDAMIEMGMR--PISVPISALRYDGRFDYTPLI 115
Query: 121 TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF 180
+A F+P+ +GDV I SGD+I+ +A+ +P+ +FL DVDGIY +
Sbjct: 116 RYIDA---GFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKD 172
Query: 181 PGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLE-VARELVRYTNEVWFVNGLVKDRL 239
P + + + ++I++ DVTGGI KK E + + N V+ +NG +R+
Sbjct: 173 P-KRNPDAVLLRDIDTNITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERI 231
Query: 240 SMAIVGNGIGTVVQ 253
+ IGTV++
Sbjct: 232 GDIGKESFIGTVIR 245
>pir||S75424 hypothetical protein c05007 - Sulfolobus solfataricus
>gi|1707830|emb|CAA69538.1| (Y08257) orf c05007
[Sulfolobus solfataricus]
Length = 241
Score = 92.1 bits (225), Expect = 6e-18
Identities = 78/254 (30%), Positives = 128/254 (49%), Gaps = 35/254 (13%)
Query: 3 IVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFY---PEEKFIVVHGGGSFGHPLARKFR 59
++K+GGS+++ K + +V++R++ EI +F P++K I++HGGGSFGH A F
Sbjct: 15 VLKLGGSLITCKDVPRCVKLEVLRRVSEEIRKFVNENPDKKIILLHGGGSFGHYEASIF- 73
Query: 60 IREGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSL 119
+ + T AM EL V K L++ + A IS F T +
Sbjct: 74 ---------DDNRIVRTSEAMQELNYIVAKHLLKSGIKA--ISVPGKFYTFD-------- 114
Query: 120 LTVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDR 179
V AL KD +PL++GDV FD S I+S D++ + +AK +++F +D GI R
Sbjct: 115 -AVLSALEKDLVPLIYGDVKFDGS----IISADDMSIDIAKRLN-ARLLFAIDKAGIIGR 168
Query: 180 FPGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRL 239
GG +I L + E L ++ D+TGGI K+ +++ +G +
Sbjct: 169 --GGGVISELRGID-EVSILMQTNYYDITGGILSKI---KKIFENNLNALIFDGSKTGNI 222
Query: 240 SMAIVGNGIGTVVQ 253
+A+ G IGT+V+
Sbjct: 223 YLALRGYNIGTLVR 236
>gb|AAK40425.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 241
Score = 92.1 bits (225), Expect = 6e-18
Identities = 78/254 (30%), Positives = 128/254 (49%), Gaps = 35/254 (13%)
Query: 3 IVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFY---PEEKFIVVHGGGSFGHPLARKFR 59
++K+GGS+++ K + +V++R++ EI +F P++K I++HGGGSFGH A F
Sbjct: 15 VLKLGGSLITCKDVPRCVKLEVLRRVSEEIRKFVNENPDKKIILLHGGGSFGHYEASIF- 73
Query: 60 IREGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSL 119
+ + T AM EL V K L++ + A IS F T +
Sbjct: 74 ---------DDNRIVRTSEAMQELNYIVAKHLLKSGIKA--ISVPGKFYTFD-------- 114
Query: 120 LTVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDR 179
V AL KD +PL++GDV FD S I+S D++ + +AK +++F +D GI R
Sbjct: 115 -AVLSALEKDLVPLIYGDVKFDGS----IISADDMSIDIAKRLN-ARLLFAIDKAGIIGR 168
Query: 180 FPGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRL 239
GG +I L + E L ++ D+TGGI K+ +++ +G +
Sbjct: 169 --GGGVISELRGID-EVSILMQTNYYDITGGILSKI---KKIFENNLNALIFDGSKTGNI 222
Query: 240 SMAIVGNGIGTVVQ 253
+A+ G IGT+V+
Sbjct: 223 YLALRGYNIGTLVR 236
>gb|AAF87047.1|AC006535_25 (AC006535) T24P13.2 [Arabidopsis thaliana]
Length = 339
Score = 90.5 bits (221), Expect = 2e-17
Identities = 63/212 (29%), Positives = 98/212 (45%), Gaps = 21/212 (9%)
Query: 40 KFIVVHGGGSFGHPLARKFRIREGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAF 99
KF+VVHG GSFGH A + + +G L + L ++ + +P
Sbjct: 97 KFVVVHGAGSFGHFQASRSGVHKGGLEKPIVKAVYNFFLQVTNLNLEIVRALAREGIPTI 156
Query: 100 PISSSSI-FVTKEGKIVASSLLTVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHL 158
+S S + T + + ++ L TV + + F+P+L GD D G I+SGD II HL
Sbjct: 157 GMSPFSCGWSTSKRDVASADLATVAKTIDSGFVPVLHGDAVLDNILGCTILSGDVIIRHL 216
Query: 159 AKEFRPEKVIFLMDVDGIYDRFPGGKLIERLTSKEIESMSLSGS---------------- 202
A +PE V+FL DV G+YDR P + + KEI ++ GS
Sbjct: 217 ADHLKPEYVVFLTDVLGVYDRPPSPSEPDAVLLKEI-AVGEDGSWKVVNPLLEHTDKKVD 275
Query: 203 ---SGIDVTGGIKKKLEVARELVRYTNEVWFV 231
+ D TGG++ K+ A + + +V+ V
Sbjct: 276 YSVAAHDTTGGMETKISEAAMIAKLGVDVYIV 307
>gb|AAG19530.1| (AE005044) ornithine carbamoyltransferase; ArgB [Halobacterium sp.
NRC-1]
Length = 245
Score = 83.1 bits (202), Expect = 3e-15
Identities = 60/216 (27%), Positives = 104/216 (47%), Gaps = 8/216 (3%)
Query: 2 IIVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFIVVHGGGSFGHPLARKFRIR 61
++VK+GGSV++ K + + D + +A ++ ++ +VVHG GSFGHP A +
Sbjct: 3 VVVKLGGSVITEKDQPETVADDRLAGLAGALADGDIDD-LVVVHGAGSFGHPRAAAHDVS 61
Query: 62 --EGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSL 119
+G++ + T M L + V + + A P+ +S+ +
Sbjct: 62 ATDGVQDAAAIRDIAGT---MEALNTAVVGALADAGVAAVPVHPASVAHRTADGALEFPT 118
Query: 120 LTVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDR 179
++ L F+P+L GD+ G I+SGDEI+ HLA+ ++V V G+ D
Sbjct: 119 GAIETLLDDGFVPVLHGDIISHAGAGATILSGDEIVTHLARAVDADRVGLCSTVPGVLD- 177
Query: 180 FPGGKLIERLTSKEIESMSLSGSSGIDVTGGIKKKL 215
G +I +T+ + +L GS DVTGG+ K+
Sbjct: 178 -DDGTVIPSITAFSDAAGALGGSDATDVTGGMAGKV 212
>pir||F72560 hypothetical protein APE1768 - Aeropyrum pernix (strain K1)
>gi|5105458|dbj|BAA80771.1| (AP000062) 252aa long
hypothetical protein [Aeropyrum pernix]
Length = 252
Score = 77.3 bits (187), Expect = 2e-13
Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 25/256 (9%)
Query: 3 IVKIGGSVLSNKRKEFSFRGDVVKRIAYEISRFYPEEKFI--VVHGGGSFGHPLARKFRI 60
+VK+GG +++ K K ++ +++R A +++ + + +VHGGGSFGH + R
Sbjct: 17 VVKLGGGLITFKDKPYTIDRAMLERTASQLAAYSKGTGRLAALVHGGGSFGHAAVAEARA 76
Query: 61 REGLKGYGSRHGFIVTHLAMLELASKVTKCFLENTLPAFPISSSSIFVTKEGKIVASSLL 120
+ GL + LAML+LA +V L+ + I F + G+ V L
Sbjct: 77 QGGLTPRAAPR----VQLAMLKLAMEVAASLLKYGVEV-SIHPPHTFCSG-GECV---LE 127
Query: 121 TVKEALSKDFIPLLFGDVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRF 180
T+K P+ FGD + G+EIVSGD++ L LA E E +I+ V G+
Sbjct: 128 TLKRDYRLGLTPMTFGD-AVPADGGVEIVSGDDLALWLAVELGVECLIYATRVPGV---V 183
Query: 181 PGGKLIERLTS-KEIESMSLSGSSGIDVTGGIKKKLEVARELVRY-TNEVWFVNGLVKDR 238
GG+++ + E E + SG D TGG+ +K++ A E R + V V G D
Sbjct: 184 KGGRVVPVIRGLGEFEDLG-SG----DATGGMARKVKAALEASRRGVSRVVIVGG---DM 235
Query: 239 LSMAIVGNGIGTVVQS 254
L A+ G +GT V +
Sbjct: 236 LLEALRGVNVGTRVDA 251
>pir||S44936 phosphotransferase - Pseudomonas syringae
>gi|485965|emb|CAA83855.1| (Z33413) phosphotransferase
[Pseudomonas syringae]
Length = 182
Score = 69.5 bits (167), Expect = 4e-11
Identities = 53/181 (29%), Positives = 91/181 (49%), Gaps = 11/181 (6%)
Query: 80 MLELASKVTKCFLENTLPAFPISSSSIF-VTKEGKIV--ASSLLTVKEALSKDFIPLLFG 136
M + S +T+ F+E L +P SS++ V +EG++ A L T A++ ++PLL G
Sbjct: 6 MFSMLSDITRIFVEQGLRVYPFQSSALLGVDEEGRVTLHARQLAT---AMASGYMPLLTG 62
Query: 137 DVSFDTSKGIEIVSGDEIILHLAKEFRPEKVIFLMDVDGIYDRFPGGKLIERLTSKEIES 196
D+ + ++ S D I LA +F +V++ DV G+YD+ G L+ + +
Sbjct: 63 DLLLRGEQEAQVFSSDNIAPLLAADFEVRRVLYYSDVAGVYDQ--GNALVPWVGNANAAC 120
Query: 197 MS--LSGSSGIDVTGGIKKKLEVARELVRYTNEVWFVNGLVKDRLSMAIVG-NGIGTVVQ 253
M + SS D+TGG++ K R+L R ++ DR+ +++ G GTV
Sbjct: 121 MEACVGASSMTDLTGGMRNKFMQQRQLARLGVVSEVLSFECFDRVHLSLCGLRQFGTVFL 180
Query: 254 S 254
S
Sbjct: 181 S 181
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.395
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90155927
Number of Sequences: 2977
Number of extensions: 3676277
Number of successful extensions: 13526
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 13496
Number of HSP's gapped (non-prelim): 12
length of query: 254
length of database: 189,106,746
effective HSP length: 56
effective length of query: 198
effective length of database: 155,591,474
effective search space: 30807111852
effective search space used: 30807111852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)