BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0393 (fbp) DE:FERRIPYOCHELIN BINDING PROTEIN
(173 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75176 ferripyochelin binding protein PAB0393 - Pyrococcus ... 351 3e-96
pir||G71037 probable ferripyochelin binding protein - Pyrococcus... 336 8e-92
sp|Q57752|Y304_METJA HYPOTHETICAL PROTEIN MJ0304 >gi|2127899|pir... 176 1e-43
gb|AAK40702.1| Ferripyochelin binding protein [Sulfolobus solfat... 173 9e-43
pir||G70443 conserved hypothetical protein aq_1660 - Aquifex aeo... 172 3e-42
pir||D83176 conserved hypothetical protein PA3753 [imported] - P... 169 2e-41
sp|P40882|Y18K_PSEAE HYPOTHETICAL 18.5 KD PROTEIN >gi|151224|gb|... 169 2e-41
emb|CAC11692.1| (AL445064) conserved hypothetical protein [Therm... 161 5e-39
pir||F81928 hypothetical protein NMA0833 [imported] - Neisseria ... 155 4e-37
pir||E81176 conserved hypothetical protein NMB0625 [imported] - ... 153 8e-37
pir||H69078 ferripyochelin binding protein - Methanobacterium th... 152 3e-36
dbj|BAB03930.1| (AP001507) ferripyochelin binding protein [Bacil... 149 2e-35
pir||D83636 conserved hypothetical protein PA0066 [imported] - P... 148 4e-35
pir||C82613 conserved hypothetical protein XF1984 [imported] - X... 145 4e-34
pir||B75318 ferripyochelin-binding protein - Deinococcus radiodu... 142 3e-33
pir||B65120 hypothetical protein b3279 - Escherichia coli (strai... 141 4e-33
sp|P45770|YRDA_ECOLI 20.4 KDA PROTEIN IN RRND-AROE INTERGENIC RE... 141 4e-33
gi|10956024 hypothetical protein [Coxiella burnetii] >gi|1075473... 139 2e-32
dbj|BAA93562.1| (AB035923) transferase [Escherichia coli O157:H7] 139 2e-32
pir||H69997 conserved hypothetical protein ytoA - Bacillus subti... 139 2e-32
pir||E81440 probable acetyltransferase Cj0229 [imported] - Campy... 139 2e-32
gi|10955988 orf 206a; similarity to PSEFBP_1 Pseudomonas aerugin... 138 4e-32
pir||A82371 carbonic anhydrase, family 3 VC0058 [imported] - Vib... 136 1e-31
pir||S75157 ferripyochelin binding protein - Synechocystis sp. (... 136 2e-31
emb|CAC12010.1| (AL445065) carbonate dehydratase related protein... 136 2e-31
dbj|BAB07008.1| (AP001518) unknown conserved protein [Bacillus h... 135 3e-31
pir||F71655 hypothetical protein RP516 - Rickettsia prowazekii >... 132 2e-30
gb|AAG12816.1|AC079677_5 (AC079677) unknown protein; 6976-8939 [... 130 1e-29
pir||F70674 hypothetical protein Rv3525c - Mycobacterium tubercu... 129 2e-29
pir||C64891 ferripyochelin-binding protein homolog b1400 - Esche... 129 2e-29
gb|AAF98404.1|AC024609_5 (AC024609) Unknown protein [Arabidopsis... 127 1e-28
gb|AAF79435.1|AC025808_17 (AC025808) F18O14.34 [Arabidopsis thal... 127 1e-28
emb|CAA66102.1| (X97452) paaY [Escherichia coli] 126 2e-28
emb|CAC10600.1| (AJ278756) putative regulatory protein [Azoarcus... 126 2e-28
gb|AAG28963.1| (AF176259) PaaY [Azoarcus evansii] 126 2e-28
gb|AAC24341.1| (AF029714) PhaM [Pseudomonas putida] 122 3e-27
sp|P39206|CAIE_ECOLI CARNITINE OPERON PROTEIN CAIE 118 5e-26
pir||C64724 protein caiE - Escherichia coli >gi|1786219|gb|AAC73... 117 9e-26
pir||I41015 caiE protein - Escherichia coli >gi|563866|emb|CAA52... 116 1e-25
dbj|BAB10927.1| (AB013389) ferripyochelin-binding protein-like [... 116 1e-25
dbj|BAB08816.1| (AB007649) contains similarity to acetyltransfer... 97 1e-19
pir||T46212 hypothetical protein T8P19.190 - Arabidopsis thalian... 96 2e-19
gb|AAF04316.1| (AF150928) carbonic anhydrase homolog [Acinetobac... 85 4e-16
pir||A82954 hypothetical protein PA5540 [imported] - Pseudomonas... 83 1e-15
pir||D82600 carbonic anhydrase XF2095 [imported] - Xylella fasti... 82 3e-15
gb|AAB66837.1| (AF015889) carbon dioxide concentrating mechanism... 72 5e-12
>pir||F75176 ferripyochelin binding protein PAB0393 - Pyrococcus abyssi (strain
Orsay) >gi|5458003|emb|CAB49493.1| (AJ248284)
FERRIPYOCHELIN BINDING PROTEIN [Pyrococcus abyssi]
Length = 173
Score = 351 bits (891), Expect = 3e-96
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD
Sbjct: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV
Sbjct: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGRRKL 173
VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGRRKL
Sbjct: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGRRKL 173
>pir||G71037 probable ferripyochelin binding protein - Pyrococcus horikoshii
>gi|3258020|dbj|BAA30703.1| (AP000006) 173aa long
hypothetical ferripyochelin binding protein [Pyrococcus
horikoshii]
Length = 173
Score = 336 bits (853), Expect = 8e-92
Identities = 159/173 (91%), Positives = 171/173 (97%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M +YE+NGKKP+IHPSAF+DE+AVVIGDVVLEEKTSVWPSAVLRGDIE+IYVGKYSNVQD
Sbjct: 1 MAIYEINGKKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
NVSIHTSHGYPTEIGEYVTIGHNA+VHGAK+GNYVIIGI SVILDGAKIGDHVIIGAGAV
Sbjct: 61 NVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAV 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGRRKL 173
VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH+KGR+++
Sbjct: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHIKGRKRI 173
>sp|Q57752|Y304_METJA HYPOTHETICAL PROTEIN MJ0304 >gi|2127899|pir||A64338 ferripyochelin
binding protein homolog - Methanococcus jannaschii
>gi|1591027|gb|AAB98291.1| (U67485) ferripyochelin
binding protein (fbp) [Methanococcus jannaschii]
Length = 159
Score = 176 bits (442), Expect = 1e-43
Identities = 83/146 (56%), Positives = 116/146 (78%)
Query: 19 IDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSHGYPTEIGEYV 78
I + AV++GDV + + +SVW +AV+RGD+++I +G YSN+QD +H S GYPT IG+YV
Sbjct: 8 IAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKGYPTIIGDYV 67
Query: 79 TIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPG 138
+IGH AV+HG +I + V++G+ + IL+GAKIG++ IIGA A+V NKEIP SLVLGVPG
Sbjct: 68 SIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPG 127
Query: 139 KVVRQLTEEEIEWTKKNAEIYVELAE 164
+VVR+LTEEEI+ K+NA YV+L+E
Sbjct: 128 RVVRELTEEEIKSIKENALRYVKLSE 153
>gb|AAK40702.1| Ferripyochelin binding protein [Sulfolobus solfataricus]
Length = 169
Score = 173 bits (435), Expect = 9e-43
Identities = 80/168 (47%), Positives = 122/168 (72%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M + E GK PK+ A+I ++ +IGDV + + TS+W V+RGD + I +GK SNVQ+
Sbjct: 1 MPIEEYLGKTPKVSQKAYIHPTSYIIGDVEIGDLTSIWHYVVIRGDNDSIRIGKESNVQE 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
N +IHT +GYP EIG+ VTIGHNAV+HGAK+ ++VI+G+G+++L+G+++ ++ IIGAG+V
Sbjct: 61 NTTIHTDYGYPVEIGDKVTIGHNAVIHGAKVSSHVIVGMGAILLNGSQVKEYSIIGAGSV 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLK 168
V IP YS+ +GVP KV+++L E+EI +NAE Y++ + LK
Sbjct: 121 VTQGTVIPPYSVAVGVPAKVIKKLREDEILIIDENAEEYLKHTRRLLK 168
>pir||G70443 conserved hypothetical protein aq_1660 - Aquifex aeolicus
>gi|2983997|gb|AAC07543.1| (AE000749) hypothetical
protein [Aquifex aeolicus]
Length = 172
Score = 172 bits (431), Expect = 3e-42
Identities = 79/168 (47%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 2 VVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDN 61
++ GK PKIH S ++ E+ VVIGDV + E +S+W +V+RGD+ I +GK +N+QDN
Sbjct: 3 IIKPYKGKYPKIHESVYLSENVVVIGDVEIGEDSSIWFGSVVRGDVNYIRIGKRTNIQDN 62
Query: 62 VSIHTSHG-YPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H +H +PT IG+ VTIGH V+HG + N +++G+G+V++DG +I D+VI+GAGA+
Sbjct: 63 CVVHVTHDTHPTIIGDNVTIGHRVVLHGCVLHNNILVGMGAVVMDGVEIEDYVIVGAGAL 122
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLK 168
V PNK+IP LV GVP K+VR L EEEI+ +++A+ YV ++L+
Sbjct: 123 VTPNKKIPSGVLVAGVPAKIVRDLREEEIKLIEESAQNYVNYKNEYLR 170
>pir||D83176 conserved hypothetical protein PA3753 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949922|gb|AAG07140.1|AE004794_5 (AE004794)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 174
Score = 169 bits (424), Expect = 2e-41
Identities = 82/165 (49%), Positives = 116/165 (69%)
Query: 4 YELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVS 63
Y L + + HP ++I SA VIG V L+ SVW AVLRGD E I++G++SNVQD
Sbjct: 3 YRLGDARVETHPDSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSV 62
Query: 64 IHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
+HT GYP +G+ VT+GHNA++HG +G+Y ++GI +VIL+GAKIG + IIGA A++P
Sbjct: 63 MHTDMGYPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPE 122
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLK 168
KEIPD SLV+G PGKVVR+L+E + + + +A YV A ++ +
Sbjct: 123 GKEIPDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYAR 167
>sp|P40882|Y18K_PSEAE HYPOTHETICAL 18.5 KD PROTEIN >gi|151224|gb|AAB88579.1| (M82832)
unknown [Pseudomonas aeruginosa]
Length = 174
Score = 169 bits (424), Expect = 2e-41
Identities = 82/165 (49%), Positives = 116/165 (69%)
Query: 4 YELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVS 63
Y L + + HP ++I SA VIG V L+ SVW AVLRGD E I++G++SNVQD
Sbjct: 3 YRLGDARVEAHPDSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSV 62
Query: 64 IHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
+HT GYP +G+ VT+GHNA++HG +G+Y ++GI +VIL+GAKIG + IIGA A++P
Sbjct: 63 MHTDMGYPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPE 122
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLK 168
KEIPD SLV+G PGKVVR+L+E + + + +A YV A ++ +
Sbjct: 123 GKEIPDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYAR 167
>emb|CAC11692.1| (AL445064) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 172
Score = 161 bits (403), Expect = 5e-39
Identities = 76/159 (47%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
Query: 12 KIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSHGYP 71
KI + +I E+AV+IGDV + + S++ AV+R D++ I +G +NVQDNV+IHT G+P
Sbjct: 8 KIGKNVYIAETAVIIGDVEIGDNVSIFDGAVIRADMDSIKIGDNTNVQDNVTIHTDTGFP 67
Query: 72 TEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPPNKEIPDYS 131
T+IG V+IGHNAVVHG + +YV+IG+G+++++G+ I I+GAGA+V N E +YS
Sbjct: 68 TKIGSNVSIGHNAVVHGCTVDDYVLIGMGAILMNGSHIRTGSIVGAGALVTQNFESEEYS 127
Query: 132 LVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGR 170
L+LGVP KV R + +E++ + K NAE Y++L + H+ GR
Sbjct: 128 LILGVPAKVTR-INKEQMAYVKANAEDYLKLKDLHMSGR 165
>pir||F81928 hypothetical protein NMA0833 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7379550|emb|CAB84115.1|
(AL162754) hypothetical protein NMA0833 [Neisseria
meningitidis Z2491]
Length = 176
Score = 155 bits (387), Expect = 4e-37
Identities = 79/165 (47%), Positives = 109/165 (65%), Gaps = 7/165 (4%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
+ P+IH S IDE+ VVIG+V L E SVWP AVLRGD+ I VG SN+QD +H SH
Sbjct: 10 RTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVLRGDVNSITVGARSNIQDGSVLHVSH 69
Query: 69 -------GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
G P IGE VT+GH ++HG +IGN V++G+G+ +LD A I D V+IGAG++V
Sbjct: 70 KTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNRVLVGMGTTVLDDAVIEDEVMIGAGSLV 129
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
PP K + L +G P + VR LT+EE + K +A YV+L++++
Sbjct: 130 PPRKRLAGGYLYVGSPVRQVRVLTDEEKAFLKYSAAHYVKLSKQY 174
>pir||E81176 conserved hypothetical protein NMB0625 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225855|gb|AAF41050.1| (AE002418) conserved
hypothetical protein [Neisseria meningitidis MC58]
Length = 176
Score = 153 bits (384), Expect = 8e-37
Identities = 78/165 (47%), Positives = 109/165 (65%), Gaps = 7/165 (4%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
+ P+IH + IDE+ VVIG+V L E SVWP AVLRGD+ I VG SN+QD +H SH
Sbjct: 10 RTPEIHETCMIDEACVVIGEVSLAEDVSVWPCAVLRGDVNSITVGARSNIQDGSVLHVSH 69
Query: 69 -------GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
G P IGE VT+GH ++HG +IGN V++G+G+ +LD A I D V+IGAG++V
Sbjct: 70 KTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNRVLVGMGTTVLDDAVIEDEVMIGAGSLV 129
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
PP K + L +G P + VR LT+EE + K +A YV+L++++
Sbjct: 130 PPRKRLAGGYLYVGSPVRQVRVLTDEEKAFLKYSAAHYVKLSKQY 174
>pir||H69078 ferripyochelin binding protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622711|gb|AAB86061.1| (AE000918) ferripyochelin
binding protein [Methanobacterium thermoautotrophicum]
Length = 151
Score = 152 bits (379), Expect = 3e-36
Identities = 70/145 (48%), Positives = 104/145 (71%)
Query: 21 ESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTI 80
+ A ++GDV + + +SVW +AVLRGD+E I +G+ SN+QDN +HTS GYP +G+ V++
Sbjct: 7 DGARIVGDVRIGDGSSVWYNAVLRGDLEPIEIGRCSNIQDNCVVHTSRGYPVRVGDCVSV 66
Query: 81 GHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPGKV 140
GH AV+HG + + V+IG+ S IL+GA IG++ I+GAGAV+ KE P SL++G P +
Sbjct: 67 GHAAVLHGCIVADNVLIGMNSTILNGAVIGENSIVGAGAVITSGKEFPPGSLIIGTPARA 126
Query: 141 VRQLTEEEIEWTKKNAEIYVELAEK 165
VR+L++EEIE + NA Y LA +
Sbjct: 127 VRELSDEEIESIRDNARRYALLARE 151
>dbj|BAB03930.1| (AP001507) ferripyochelin binding protein [Bacillus halodurans]
Length = 175
Score = 149 bits (372), Expect = 2e-35
Identities = 72/159 (45%), Positives = 109/159 (68%)
Query: 2 VVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDN 61
+++ PK+ +AFI ESA VIG+V + T+V +AV+RGD I +G+ N+Q+N
Sbjct: 1 MIFRYKDFSPKVDTTAFIAESATVIGNVEIGAYTTVLFNAVIRGDEGLIKIGRRCNIQEN 60
Query: 62 VSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
V H YP + + V++GH+A+VHG + V+IG+G+ +LDGA+IG++ I+GAG+VV
Sbjct: 61 VMCHLYEQYPLVLEDEVSLGHHAIVHGCTLKQGVLIGMGATVLDGAEIGEYSIVGAGSVV 120
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYV 160
PP K IP SLVLG PGKVVR++TE+++ ++ E YV
Sbjct: 121 PPGKVIPPRSLVLGSPGKVVREVTEQDLAMIEETVETYV 159
>pir||D83636 conserved hypothetical protein PA0066 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9945890|gb|AAG03456.1|AE004446_4 (AE004446)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 180
Score = 148 bits (370), Expect = 4e-35
Identities = 70/174 (40%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M + GK P + F+D SAV++GD+ + +SVWP V+RGD+ RI +G+ S++QD
Sbjct: 1 MTIRSYQGKTPLLGERVFVDPSAVLVGDIEIGADSSVWPLVVIRGDMHRIRIGQRSSIQD 60
Query: 61 NVSIHTSH-------GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHV 113
+H +H G+P IG+ VT+GH ++HG IGN V++G+GS+++DGA I D V
Sbjct: 61 GSVLHITHAGPFNPDGFPLSIGDEVTVGHKVLLHGCSIGNRVLVGMGSIVMDGAVIEDEV 120
Query: 114 IIGAGAVVPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
I+GAG++VPP K + L +G P K R L+++E + A YV+L + H+
Sbjct: 121 ILGAGSLVPPGKVLESGFLYVGSPAKKARPLSDKERGFFAYTAGNYVKLKDLHI 174
>pir||C82613 conserved hypothetical protein XF1984 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107095|gb|AAF84786.1|AE004018_2 (AE004018)
conserved hypothetical protein [Xylella fastidiosa]
Length = 187
Score = 145 bits (361), Expect = 4e-34
Identities = 72/166 (43%), Positives = 105/166 (62%), Gaps = 7/166 (4%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
K P++ + +ID ++ VIGDV+L + SVWP V+RGD+ I +G +N+QD IH SH
Sbjct: 10 KTPQLGCAVYIDPTSTVIGDVILGDDVSVWPQTVIRGDVNHIRIGARTNIQDGTIIHVSH 69
Query: 69 -------GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
GYPT IG VTIGH ++H I +IG+G+ ILDGA I + +GAGAV+
Sbjct: 70 HSPYNTAGYPTLIGTDVTIGHGTIIHACTIEKLCLIGMGACILDGATIKKYGFVGAGAVI 129
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
PNK + + L LG P ++VR+L+++EIE +A+ YV+L +L
Sbjct: 130 SPNKVVGEAELWLGNPARLVRKLSDKEIESLHYSAQHYVKLKNGYL 175
>pir||B75318 ferripyochelin-binding protein - Deinococcus radiodurans (strain
R1) >gi|6459880|gb|AAF11635.1|AE002044_8 (AE002044)
ferripyochelin-binding protein [Deinococcus radiodurans]
Length = 240
Score = 142 bits (354), Expect = 3e-33
Identities = 72/171 (42%), Positives = 105/171 (61%), Gaps = 6/171 (3%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M ++ L P IHP+AF+ SA VIG V +E S+W AVLRGD E++ VG+ SNVQD
Sbjct: 60 MPLHTLEDLTPDIHPTAFVAPSADVIGQVKVEAGASIWFGAVLRGDTEQLRVGERSNVQD 119
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H G+P + E VT+GH AVVHGA ++G+G+++L+G+++G ++GAGA+
Sbjct: 120 GAVLHADPGFPCTLHEDVTVGHRAVVHGATCEAGSLVGMGAIMLNGSRLGRGAVLGAGAL 179
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGRR 171
+P KE+PD L +G P +VVR + NA YV E++ G R
Sbjct: 180 LPEGKEVPDGMLAVGTPARVVRPVA------ATPNAASYVRNGERYRAGLR 224
>pir||B65120 hypothetical protein b3279 - Escherichia coli (strain K-12)
>gi|606213|gb|AAA58076.1| (U18997) ORF_o256 [Escherichia
coli] >gi|1789673|gb|AAC76304.1| (AE000406) putative
transferase [Escherichia coli K12]
Length = 256
Score = 141 bits (353), Expect = 4e-33
Identities = 69/164 (42%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Query: 11 PKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH-- 68
P+I ID+S+VVIGDV L + +WP V+RGD+ + +G +N+QD +H +H
Sbjct: 85 PQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKS 144
Query: 69 -----GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
G P IGE VT+GH ++HG IGN V++G+GS++LDGA + D V+IGAG++VP
Sbjct: 145 SYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQ 204
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
NK + L LG P K +R L++EE + +A YV+ +++L
Sbjct: 205 NKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYL 248
>sp|P45770|YRDA_ECOLI 20.4 KDA PROTEIN IN RRND-AROE INTERGENIC REGION
Length = 184
Score = 141 bits (353), Expect = 4e-33
Identities = 69/164 (42%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Query: 11 PKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH-- 68
P+I ID+S+VVIGDV L + +WP V+RGD+ + +G +N+QD +H +H
Sbjct: 13 PQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKS 72
Query: 69 -----GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
G P IGE VT+GH ++HG IGN V++G+GS++LDGA + D V+IGAG++VP
Sbjct: 73 SYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQ 132
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
NK + L LG P K +R L++EE + +A YV+ +++L
Sbjct: 133 NKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYL 176
>gi|10956024 hypothetical protein [Coxiella burnetii] >gi|1075473|pir||S52228
ferripyochelin-binding protein homolog 206 - Coxiella
burnetii plasmids >gi|757762|emb|CAA59941.1| (X85964)
similarity to PSEFBP_1 Pseudomonas aeruginosa
ferripyochelin binding protein (fbp gene)~gtg start
codon [Coxiella burnetii] >gi|2706527|emb|CAA75821.1|
(Y15898) putative ferripyochelin binding protein (fbp)
[Coxiella burnetii] >gi|4928234|gb|AAD33478.1|AF131076_4
(AF131076) hypothetical protein [Coxiella burnetii]
Length = 206
Score = 139 bits (347), Expect = 2e-32
Identities = 69/165 (41%), Positives = 111/165 (66%), Gaps = 1/165 (0%)
Query: 2 VVYELNGKKPKI-HPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
++Y ++PK+ + FI +SA VIG V++ S+ P AV+R D + I +G+ SNVQD
Sbjct: 30 MLYAFEDREPKLLGDNYFIADSADVIGSVIIHNNVSILPHAVIRADNDVIEIGEGSNVQD 89
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+HT G P +G+ VTI H A++HG KIG++ +I IG+++++ A IG + IIGA A+
Sbjct: 90 GALLHTDPGIPMRVGKGVTIAHRAMLHGCKIGDHSVIAIGAIVMNNAIIGKNCIIGANAL 149
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEK 165
+ N++IPD SLV+G PGKV QL++++IE + A+ Y+E ++
Sbjct: 150 ILENQKIPDGSLVIGSPGKVKSQLSQKQIEEMQGYAKHYIEKIDR 194
>dbj|BAA93562.1| (AB035923) transferase [Escherichia coli O157:H7]
Length = 244
Score = 139 bits (347), Expect = 2e-32
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 11 PKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH-- 68
P+I ID+S+VVIGDV L + +WP V+RGD+ + +G +N+QD +H +H
Sbjct: 85 PQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKS 144
Query: 69 -----GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
G P IGE VT+GH ++HG IGN V++G+GS++LDGA + D V+IGAG++VP
Sbjct: 145 SYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQ 204
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVE 161
NK + L LG P K +R L++EE + +A YV+
Sbjct: 205 NKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVK 242
>pir||H69997 conserved hypothetical protein ytoA - Bacillus subtilis
>gi|2293300|gb|AAC00378.1| (AF008220) YtoA [Bacillus
subtilis] >gi|2635536|emb|CAB15030.1| (Z99119) similar
to hypothetical proteins [Bacillus subtilis]
Length = 171
Score = 139 bits (346), Expect = 2e-32
Identities = 70/160 (43%), Positives = 99/160 (61%)
Query: 2 VVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDN 61
++Y KP IHP+AFI ++A + GDVV+ E++S+W S V+RGD+ +G N+QD
Sbjct: 1 MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDL 60
Query: 62 VSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
+H S I + TIGH +H A I +IG+GS+ILDGA+IG+ IGAG++V
Sbjct: 61 SCLHQSPNKTLLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLV 120
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVE 161
PP K IP L G P KV+R LTEE+ + ++ YVE
Sbjct: 121 PPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVE 160
>pir||E81440 probable acetyltransferase Cj0229 [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6967707|emb|CAB72698.1|
(AL139074) putative acetyltransferase [Campylobacter
jejuni]
Length = 182
Score = 139 bits (346), Expect = 2e-32
Identities = 69/179 (38%), Positives = 110/179 (60%), Gaps = 12/179 (6%)
Query: 2 VVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDN 61
++ + PK+ + F+ E A +IG++ + +++S+W + VLR D+ I +GK +N+QD
Sbjct: 1 MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRADVNFIKIGKRTNIQDL 60
Query: 62 VSIHTSH------------GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKI 109
++H H G+PT IG+ VTIGHN V+H I N V+IG+ +VI+D A I
Sbjct: 61 STVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVIKNRVLIGMNAVIMDNALI 120
Query: 110 GDHVIIGAGAVVPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLK 168
+ I+GAG+VV K+ P SL+LG P K VR+L +EE+ + K++A YV+ + LK
Sbjct: 121 EEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEVSFLKQSALNYVDFKNEFLK 179
>gi|10955988 orf 206a; similarity to PSEFBP_1 Pseudomonas aeruginosa
ferripyochelin binding protein (fbp) gene [Coxiella
burnetii] >gi|481155|pir||S38220 hypothetical protein -
Coxiella burnetii >gi|580961|emb|CAA53108.1| (X75356)
orf 206a; similarity to PSEFBP_1 Pseudomonas aeruginosa
ferripyochelin binding protein (fbp) gene [Coxiella
burnetii]
Length = 206
Score = 138 bits (344), Expect = 4e-32
Identities = 69/165 (41%), Positives = 110/165 (65%), Gaps = 1/165 (0%)
Query: 2 VVYELNGKKPKI-HPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
++Y ++PK+ + FI +SA VIG V++ S+ P AV+R D E I +G+ SNVQD
Sbjct: 30 MLYAFEDREPKLLGDNYFIADSADVIGSVIIHNNVSILPHAVIRADNEVIEIGEGSNVQD 89
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+HT G P +G+ VTI H A++HG IG++ +I IG+++++ A IG + IIGA A+
Sbjct: 90 GALLHTDPGIPMRVGKGVTIAHRAMLHGCTIGDHSVIAIGAIVMNNAIIGKNCIIGANAL 149
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEK 165
+ N++IPD SLV+G PGKV QL++++IE + A+ Y+E ++
Sbjct: 150 ILENQKIPDGSLVIGSPGKVKSQLSQKQIEEMQGYAKHYIEKIDR 194
>pir||A82371 carbonic anhydrase, family 3 VC0058 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9654452|gb|AAF93236.1|
(AE004096) carbonic anhydrase, family 3 [Vibrio
cholerae]
Length = 184
Score = 136 bits (340), Expect = 1e-31
Identities = 66/167 (39%), Positives = 102/167 (60%), Gaps = 7/167 (4%)
Query: 8 GKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTS 67
G PK+ ++D SAV++GD+ L + S+WP RGD+ I +GK +N+QD +H +
Sbjct: 10 GIVPKLGEGVYVDSSAVLVGDIELGDDASIWPLVAARGDVNHIRIGKRTNIQDGSVLHVT 69
Query: 68 H-------GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
H GYP IG+ VTIGH ++HG I + V++G+GS++LDGA I + V+IGAG++
Sbjct: 70 HKNAENPNGYPLCIGDDVTIGHKVMLHGCTIHDRVLVGMGSIVLDGAVIENDVMIGAGSL 129
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
VPP K + L +G P K R L ++E + K++ YV+ +L
Sbjct: 130 VPPGKRLESGFLYMGSPVKQARPLNDKERAFLVKSSSNYVQSKNDYL 176
>pir||S75157 ferripyochelin binding protein - Synechocystis sp. (strain PCC
6803) >gi|1652147|dbj|BAA17071.1| (D90903)
ferripyochelin binding protein [Synechocystis sp.]
Length = 190
Score = 136 bits (338), Expect = 2e-31
Identities = 67/156 (42%), Positives = 102/156 (64%), Gaps = 2/156 (1%)
Query: 11 PKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSHGY 70
P + P+AF+ +A V+G V L + S+W AV+R D+E I +G+ +N+QD +H G
Sbjct: 31 PDLSPAAFVAANATVVGKVHLGKDCSIWYGAVVRADLEAIIIGEGTNIQDGAILHGDPGI 90
Query: 71 PTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPPNKEIPDY 130
T + ++VT+GH AVVH A I +IGIG+ ILD +IG IIGAGAVV K++P
Sbjct: 91 VTVLEDWVTVGHRAVVHAAHIERGSLIGIGATILDNVRIGAGSIIGAGAVV--TKDVPPR 148
Query: 131 SLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
SLV+GVP K+++Q++E +++ + + YV LA+ H
Sbjct: 149 SLVMGVPAKIIKQVSEGQVQGLLDHGQNYVRLAKAH 184
>emb|CAC12010.1| (AL445065) carbonate dehydratase related protein [Thermoplasma
acidophilum]
Length = 228
Score = 136 bits (338), Expect = 2e-31
Identities = 71/170 (41%), Positives = 107/170 (62%), Gaps = 3/170 (1%)
Query: 2 VVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDN 61
++YE G+ P+I PSA++ ESA VIG V + ++ + P AVLRGD I VG YS ++DN
Sbjct: 55 MIYEFEGRIPEIDPSAYVSESATVIGKVKIGKEVWIGPGAVLRGDYGEIEVGDYSAIEDN 114
Query: 62 VSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
IH G T IG++VTIGH +V+H +I ++ +IG+GS + D A +G IG GAVV
Sbjct: 115 CVIHARPGEKTTIGQHVTIGHLSVIHTGRIRDWAVIGMGSTVSDFAVVGVWAAIGEGAVV 174
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIE-WT--KKNAEIYVELAEKHLK 168
+EIPD ++ +GVP KV+ ++ ++ + WT K N + + +LK
Sbjct: 175 KNRQEIPDEAVAVGVPAKVIGKIDDDYKKLWTDYKHNYNTFSSRYKTNLK 224
>dbj|BAB07008.1| (AP001518) unknown conserved protein [Bacillus halodurans]
Length = 174
Score = 135 bits (337), Expect = 3e-31
Identities = 68/164 (41%), Positives = 99/164 (59%), Gaps = 3/164 (1%)
Query: 2 VVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDN 61
++Y KKPKI + F+ + + GDV + +S+W + V+RGD+ ++G+ N+QDN
Sbjct: 1 MLYPYKDKKPKIAENVFLADYVTITGDVTIGADSSIWYNTVIRGDVSPTFIGERVNIQDN 60
Query: 62 VSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVV 121
+H S P I + VT+GH ++H I +IG+GS+ILDGA++G+ IGAG++V
Sbjct: 61 SVLHQSPRTPLVIEDDVTVGHQVILHSCTIRKEALIGMGSIILDGAEVGEGAFIGAGSLV 120
Query: 122 PPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEK 165
P K+IP SL G P KVVR LTEE+ K A I E EK
Sbjct: 121 PQGKKIPANSLAFGRPAKVVRTLTEED---RKDMARIRREYVEK 161
>pir||F71655 hypothetical protein RP516 - Rickettsia prowazekii
>gi|3861068|emb|CAA14968.1| (AJ235272) unknown
[Rickettsia prowazekii]
Length = 185
Score = 132 bits (329), Expect = 2e-30
Identities = 67/164 (40%), Positives = 103/164 (61%), Gaps = 1/164 (0%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M++ G PKI SA++ +++ +IGDVV+ +S+W + VLRGD+E I +G +NVQD
Sbjct: 1 MLIVPYKGIIPKIAKSAYVAKNSALIGDVVIGNNSSIWFNTVLRGDVESIKIGNNTNVQD 60
Query: 61 NVSIHTSH-GYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGA 119
IHTS P EIG +TIGH +++H I + IG+ + I+D A I ++ I AG+
Sbjct: 61 GSVIHTSRFNGPVEIGNNITIGHLSLIHACTIHSNAFIGMSATIMDYAVIEEYAFIAAGS 120
Query: 120 VVPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELA 163
+VPP K I L +G P + VR LT++++++ + N YVELA
Sbjct: 121 LVPPKKIIKSNELWMGSPAQFVRYLTDKDLQYMEDNIRNYVELA 164
>gb|AAG12816.1|AC079677_5 (AC079677) unknown protein; 6976-8939 [Arabidopsis thaliana]
Length = 278
Score = 130 bits (323), Expect = 1e-29
Identities = 64/170 (37%), Positives = 100/170 (58%), Gaps = 6/170 (3%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
K P + F+ SA VIGDV + + +S+W VLRGD+ I VG +N+QDN +H +
Sbjct: 51 KSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISVGSGTNIQDNTLVHVAK 110
Query: 69 G------YPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVP 122
PT IG+ VT+GH+AV+HG + + +G+G+ +LDG + H ++ AG++V
Sbjct: 111 TNISGKVLPTLIGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKHAMVAAGSLVK 170
Query: 123 PNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKGRRK 172
N IP + G P K +R+LT+EEI + ++A+ Y+ LA+ H K
Sbjct: 171 QNTRIPSGEVWGGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASENSK 220
>pir||F70674 hypothetical protein Rv3525c - Mycobacterium tuberculosis (strain
H37RV) >gi|1666135|emb|CAB05052.1| (Z82098) hypothetical
protein Rv3525c [Mycobacterium tuberculosis]
Length = 174
Score = 129 bits (322), Expect = 2e-29
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M ++ G+ P+I P+AF+ +A +IGDV +E SVW +AVLRGD + V + +NVQD
Sbjct: 1 MPLFSFEGRSPRIDPTAFVAPTATLIGDVTIEAGASVWFNAVLRGDYAPVVVREGANVQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H G P +IG T+ H V+HG +G+ +I + +LDGA IG +I AGA+
Sbjct: 61 GAVLHAPPGIPVDIGPGATVAHLCVIHGVHVGSEALIANHATVLDGAVIGARCMIAAGAL 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIE-WTKKNAEIYVELAEKHLKG 169
V +IP LV G P KV + E W N + Y +LA +HL G
Sbjct: 121 VVAGTQIPAGMLVTGAPAKVKGPIEGTGAEMWVNVNPQAYRDLAARHLAG 170
>pir||C64891 ferripyochelin-binding protein homolog b1400 - Escherichia coli
>gi|1742279|dbj|BAA15008.1| (D90778) Carnitine operon
protein CaiE. [Escherichia coli]
>gi|1787667|gb|AAC74482.1| (AE000237) putative
transferase [Escherichia coli K12]
Length = 196
Score = 129 bits (321), Expect = 2e-29
Identities = 63/165 (38%), Positives = 101/165 (61%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M +Y+++G P + +F+ +AV+IGDV+L + V P+A LRGD RI V +N+QD
Sbjct: 1 MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
N +H T +GE IGH+A++HG I ++G+ +V++DGA IG++ I+GA A
Sbjct: 61 NCVMHGFPEQDTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAF 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEK 165
V E+P L++G P K +R+L+E+E+ W K+ Y L +
Sbjct: 121 VKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTR 165
>gb|AAF98404.1|AC024609_5 (AC024609) Unknown protein [Arabidopsis thaliana]
Length = 275
Score = 127 bits (315), Expect = 1e-28
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
K P + AF+ SA VIGDV + +S+W VLRGD+ + VG +N+QDN +H +
Sbjct: 51 KAPIVDKEAFVAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQDNSLVHVAK 110
Query: 69 G------YPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVP 122
+PT IG+ VTIGH+AV+HG + + IG+G+ +LDG + H ++ AGA+V
Sbjct: 111 SNLSGKVHPTIIGDNVTIGHSAVLHGCTVEDETFIGMGATLLDGVVVEKHGMVAAGALVR 170
Query: 123 PNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
N IP + G P + +R+LT+EEI + ++A Y LA+ H
Sbjct: 171 QNTRIPSGEVWGGNPARFLRKLTDEEIAFISQSATNYSNLAQAH 214
>gb|AAF79435.1|AC025808_17 (AC025808) F18O14.34 [Arabidopsis thaliana]
Length = 298
Score = 127 bits (315), Expect = 1e-28
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
K P + AF+ SA VIGDV + +S+W VLRGD+ + VG +N+QDN +H +
Sbjct: 74 KAPIVDKEAFVAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQDNSLVHVAK 133
Query: 69 G------YPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVP 122
+PT IG+ VTIGH+AV+HG + + IG+G+ +LDG + H ++ AGA+V
Sbjct: 134 SNLSGKVHPTIIGDNVTIGHSAVLHGCTVEDETFIGMGATLLDGVVVEKHGMVAAGALVR 193
Query: 123 PNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
N IP + G P + +R+LT+EEI + ++A Y LA+ H
Sbjct: 194 QNTRIPSGEVWGGNPARFLRKLTDEEIAFISQSATNYSNLAQAH 237
>emb|CAA66102.1| (X97452) paaY [Escherichia coli]
Length = 196
Score = 126 bits (313), Expect = 2e-28
Identities = 62/165 (37%), Positives = 100/165 (60%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M +Y+++G P + +F+ +AV+IGDV+L + V P+A LRGD RI V +N+QD
Sbjct: 1 MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
N +H T + E IGH+A++HG I ++G+ +V++DGA IG++ I+GA A
Sbjct: 61 NCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAF 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEK 165
V E+P L++G P K +R+L+E+E+ W K+ Y L +
Sbjct: 121 VKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTR 165
>emb|CAC10600.1| (AJ278756) putative regulatory protein [Azoarcus evansii]
Length = 201
Score = 126 bits (313), Expect = 2e-28
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M YE++G +P +HPSA++ AV++GDV + + V P A LRGD I + + +NVQD
Sbjct: 1 MPCYEIDGLRPVVHPSAYVHPDAVLVGDVHIGARCYVAPLASLRGDFGPIILREGANVQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H G T + E +GH A++H +G ++G+ +V++D A IG+ I+ A +
Sbjct: 61 CCVMHGFPGIDTLVEENGHVGHGAILHSCHVGRNALVGMNAVVMDRAVIGESSIVAACSF 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
V EIP LV GVP KVVR LT +E++W + Y +LA + L
Sbjct: 121 VKAGMEIPPQVLVAGVPAKVVRTLTRQEMDWKVEGTRCYHDLAARSL 167
>gb|AAG28963.1| (AF176259) PaaY [Azoarcus evansii]
Length = 201
Score = 126 bits (313), Expect = 2e-28
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M YE++G +P +HPSA++ AV++GDV + + V P A LRGD I + + +NVQD
Sbjct: 1 MPCYEIDGLRPVVHPSAYVHPDAVLVGDVHIGARCYVAPLASLRGDFGPIILREGANVQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H G T + E +GH A++H +G ++G+ +V++D A IG+ I+ A +
Sbjct: 61 CCVMHGFPGIDTLVEENGHVGHGAILHSCHVGRNALVGMNAVVMDRAVIGESSIVAACSF 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHL 167
V EIP LV GVP KVVR LT +E++W + Y +LA + L
Sbjct: 121 VKAGMEIPPQVLVAGVPAKVVRTLTRQEMDWKVEGTRCYHDLAARSL 167
>gb|AAC24341.1| (AF029714) PhaM [Pseudomonas putida]
Length = 199
Score = 122 bits (303), Expect = 3e-27
Identities = 61/165 (36%), Positives = 96/165 (57%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M Y L+G P +HP+A++ SAV+IGDV++ + + P A LRGD RI + + +N+QD
Sbjct: 1 MPCYRLDGLTPVVHPTAYVHPSAVLIGDVIVGPRCYIGPLASLRGDFGRIVLEEGANLQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H G T + +GH AV+HG K+G +IG+ +V++DGA + I+ A A
Sbjct: 61 TCVMHGFPGGDTVVERNGHVGHGAVLHGCKVGRDALIGMNAVVMDGAHVAPRCIVAATAF 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEK 165
V SLV+G P +V R L+E+E+ W ++ Y LA++
Sbjct: 121 VKAGFACEAQSLVMGSPAQVKRPLSEQELAWKQRGTAEYQHLAQR 165
>sp|P39206|CAIE_ECOLI CARNITINE OPERON PROTEIN CAIE
Length = 196
Score = 118 bits (292), Expect = 5e-26
Identities = 60/162 (37%), Positives = 92/162 (56%)
Query: 1 MVVYELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQD 60
M Y G P +HP+AF+ SAV+IGDV++ + P A LRGD R+ V +N+QD
Sbjct: 1 MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQD 60
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAV 120
+H T +GE IGH A++HG IG ++G+ SVI+DGA IG+ I+ A +
Sbjct: 61 GCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSF 120
Query: 121 VPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVEL 162
V L++G P + VR ++++E+ W + N + Y +L
Sbjct: 121 VKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDL 162
>pir||C64724 protein caiE - Escherichia coli >gi|1786219|gb|AAC73146.1|
(AE000114) possible synthesis of cofactor for carnitine
racemase and dehydratase [Escherichia coli K12]
Length = 203
Score = 117 bits (290), Expect = 9e-26
Identities = 59/159 (37%), Positives = 91/159 (57%)
Query: 4 YELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVS 63
Y G P +HP+AF+ SAV+IGDV++ + P A LRGD R+ V +N+QD
Sbjct: 11 YAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCI 70
Query: 64 IHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
+H T +GE IGH A++HG IG ++G+ SVI+DGA IG+ I+ A + V
Sbjct: 71 MHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKA 130
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVEL 162
L++G P + VR ++++E+ W + N + Y +L
Sbjct: 131 GFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDL 169
>pir||I41015 caiE protein - Escherichia coli >gi|563866|emb|CAA52115.1| (X73904)
caiE [Escherichia coli]
Length = 203
Score = 116 bits (289), Expect = 1e-25
Identities = 59/159 (37%), Positives = 91/159 (57%)
Query: 4 YELNGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVS 63
Y G P +HP+AF+ SAV+IGDV++ + P A LRGD R+ V +N+QD
Sbjct: 11 YAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQTGANIQDGCI 70
Query: 64 IHTSHGYPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPP 123
+H T +GE IGH A++HG IG ++G+ SVI+DGA IG+ I+ A + V
Sbjct: 71 MHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKA 130
Query: 124 NKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVEL 162
L++G P + VR ++++E+ W + N + Y +L
Sbjct: 131 GFHGEKRQLLMGTPARAVRSVSDDELHWKQLNTKEYQDL 169
>dbj|BAB10927.1| (AB013389) ferripyochelin-binding protein-like [Arabidopsis
thaliana]
Length = 213
Score = 116 bits (288), Expect = 1e-25
Identities = 62/164 (37%), Positives = 92/164 (55%), Gaps = 6/164 (3%)
Query: 9 KKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSH 68
K P + AF+ +A + GDV + +S+W VLRGD I VG +N+QDN +H +
Sbjct: 6 KTPNVDKGAFVAPNASLSGDVHVGRGSSIWYGCVLRGDANSISVGAGTNIQDNALVHVAK 65
Query: 69 G------YPTEIGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVP 122
PT IG+ VTIGH+AV+HG + + IG + +LDGA + H ++ +GA+V
Sbjct: 66 TNLSGKVLPTVIGDNVTIGHSAVLHGCTVEDEAYIGTSATVLDGAHVEKHAMVASGALVR 125
Query: 123 PNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
N IP + G P K +R++TEEE + +A Y LA+ H
Sbjct: 126 QNTRIPSGEVWGGNPAKFLRKVTEEERVFFSSSAVEYSNLAQAH 169
>dbj|BAB08816.1| (AB007649) contains similarity to acetyltransferase~gene_id:MLE2.14
[Arabidopsis thaliana]
Length = 252
Score = 97.1 bits (238), Expect = 1e-19
Identities = 59/165 (35%), Positives = 88/165 (52%), Gaps = 11/165 (6%)
Query: 11 PKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSHGY 70
PK+ A++ + V+ G V + + +SVW AVLRGD+ +I VG SNVQ+ +H +
Sbjct: 66 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSS 125
Query: 71 PTE------IGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPPN 124
PT I YVT+G +++ I IIG S++++G+ + I+ AG+VVPP
Sbjct: 126 PTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVVPPG 185
Query: 125 KEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKG 169
+ IP L G P + +R LT EE K A +A HL G
Sbjct: 186 RRIPSGELWGGNPARFIRTLTNEETLEIPKLA-----VAINHLSG 225
>pir||T46212 hypothetical protein T8P19.190 - Arabidopsis thaliana
>gi|6523099|emb|CAB62357.1| (AL133315) putative protein
[Arabidopsis thaliana]
Length = 256
Score = 96.0 bits (235), Expect = 2e-19
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 11 PKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDIERIYVGKYSNVQDNVSIHTSHGY 70
PK+ A++ + V+ G V + + +SVW AVLRGD+ +I VG SNVQ+ +H +
Sbjct: 70 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSS 129
Query: 71 PTE------IGEYVTIGHNAVVHGAKIGNYVIIGIGSVILDGAKIGDHVIIGAGAVVPPN 124
PT I YVT+G +++ I IIG S++++G+ + I+ AG+V+PP
Sbjct: 130 PTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPG 189
Query: 125 KEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKHLKG 169
+ IP L G P + +R LT EE K A +A HL G
Sbjct: 190 RRIPSGELWGGNPARFIRTLTNEETLEIPKLA-----VAINHLSG 229
>gb|AAF04316.1| (AF150928) carbonic anhydrase homolog [Acinetobacter sp. ADP1]
Length = 185
Score = 85.4 bits (208), Expect = 4e-16
Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 14/140 (10%)
Query: 7 NGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLR-------GDIERIYVGKYSNVQ 59
+G P+I SA+ID++A++ G V++ V P AV+R GD++ I +G SN+Q
Sbjct: 6 SGHLPQIDQSAYIDQTAIICGKVIIHANVFVGPYAVIRADETDETGDMQPIIIGANSNIQ 65
Query: 60 DNVSIHTSHGYPTEIGEYVTIGHNAVVHG-AKIGNYVIIGIGSVILDGAKIGDHVIIGAG 118
D V IH+ G IGE +I H +++HG +IG++V +G SV+ + KIG + I
Sbjct: 66 DGVVIHSKAGASVIIGENSSIAHRSIIHGPCEIGHHVFVGFNSVLFN-CKIGPNSAIRHN 124
Query: 119 AVV-----PPNKEIPDYSLV 133
AVV P N +P S +
Sbjct: 125 AVVDGRDLPANFYVPAMSYI 144
>pir||A82954 hypothetical protein PA5540 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951879|gb|AAG08925.1|AE004966_7
(AE004966) hypothetical protein [Pseudomonas aeruginosa]
Length = 186
Score = 83.5 bits (203), Expect = 1e-15
Identities = 44/123 (35%), Positives = 73/123 (58%), Gaps = 9/123 (7%)
Query: 7 NGKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGD-------IERIYVGKYSNVQ 59
+G P I SA++D++A++ G V+++ V P AV+R D ++ I +G SN+Q
Sbjct: 7 SGDLPVIDESAYVDKTAIICGKVIIQANVFVGPYAVIRADEVDADGGMQPIVIGANSNIQ 66
Query: 60 DNVSIHTSHGYPTEIGEYVTIGHNAVVHG-AKIGNYVIIGIGSVILDGAKIGDHVIIGAG 118
D V IH+ G IGE+ +I H ++VHG ++G+ V IG SV+ + ++GD ++
Sbjct: 67 DGVVIHSKSGAAVTIGEHSSIAHRSIVHGPCEVGDRVFIGFNSVLFN-CRVGDGCVVRHN 125
Query: 119 AVV 121
AVV
Sbjct: 126 AVV 128
>pir||D82600 carbonic anhydrase XF2095 [imported] - Xylella fastidiosa (strain
9a5c) >gi|9107221|gb|AAF84894.1|AE004025_4 (AE004025)
carbonic anhydrase [Xylella fastidiosa]
Length = 211
Score = 82.3 bits (200), Expect = 3e-15
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 14/134 (10%)
Query: 8 GKKPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLR-------GDIERIYVGKYSNVQD 60
G P +H SAF+D +A++ G V++E + P AV+R GDI+ I +G +N+QD
Sbjct: 33 GDLPDVHESAFVDPTAILCGCVIVEAGVFIGPYAVIRADETTVEGDIKPIRIGIGANIQD 92
Query: 61 NVSIHTSHGYPTEIGEYVTIGHNAVVHG-AKIGNYVIIGIGSVILDGAKIGDHVIIGAGA 119
V IH+ G IG +I H A+VHG IG V IG SV+ + +GD ++ A
Sbjct: 93 GVVIHSKSGAAVTIGARTSIAHRAIVHGPCTIGERVFIGFNSVLFN-CVVGDGCVVRHNA 151
Query: 120 VV-----PPNKEIP 128
VV PP +P
Sbjct: 152 VVDGCDLPPGFYVP 165
>gb|AAB66837.1| (AF015889) carbon dioxide concentrating mechanism protein
[Synechococcus PCC7002]
Length = 661
Score = 71.8 bits (173), Expect = 5e-12
Identities = 55/173 (31%), Positives = 85/173 (48%), Gaps = 19/173 (10%)
Query: 10 KPKIHPSAFIDESAVVIGDVVLEEKTSVWPSAVLRGDI-ERIYVGKYSNVQDNVSIH--- 65
+PKIH SA++ + +IGDV + E + P +R D ++G +N+QD V IH
Sbjct: 19 EPKIHESAYVHSFSNLIGDVTVCEHVLISPGTSIRADEGAPFHIGAATNIQDGVVIHGLE 78
Query: 66 -------TSHGYPTEIGEYVTIGHNAVVHG-AKIGNYVIIGIGSVILDGAKIGDHVIIGA 117
H Y IG+ I H A+VHG A IGN +G S + + A+IGD +I
Sbjct: 79 QGRVVGADGHDYSVWIGDRSCITHMALVHGPAYIGNDCFVGFRSTVFN-ARIGDGCVIMM 137
Query: 118 GAVV-----PPNKEIPDYSLVLGVPG-KVVRQLTEEEIEWTKKNAEIYVELAE 164
A+V PP K +P +++ + + +TE + + K+ EI L E
Sbjct: 138 HALVQDVDIPPGKYVPSGAVITNQQQVERLSNVTEADRAFAKQVVEINEALRE 190
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.315 0.139 0.399
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69532958
Number of Sequences: 2977
Number of extensions: 2956995
Number of successful extensions: 6458
Number of sequences better than 1.0e-10: 46
Number of HSP's better than 0.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6328
Number of HSP's gapped (non-prelim): 47
length of query: 173
length of database: 189,106,746
effective HSP length: 54
effective length of query: 119
effective length of database: 156,788,448
effective search space: 18657825312
effective search space used: 18657825312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 162 (67.5 bits)