BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0418 (PAB0418) DE:Hypothetical protein
(236 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75181 hypothetical protein PAB0418 - Pyrococcus abyssi (st... 470 e-132
sp|O59220|YF52_PYRHO HYPOTHETICAL PROTEIN PH1552 >gi|7519190|pir... 456 e-127
sp|Q58011|Y592_METJA HYPOTHETICAL PROTEIN MJ0592 >gi|2128397|pir... 266 2e-70
gi|11498102 conserved hypothetical protein [Archaeoglobus fulgid... 264 8e-70
sp|O26781|Y685_METTH HYPOTHETICAL PROTEIN MTH685 >gi|7482238|pir... 255 4e-67
gb|AAG19629.1| (AE005051) Vng1276c [Halobacterium sp. NRC-1] 209 3e-53
emb|CAB57566.1| (Y18930) proteasome alpha subunit (C-terminus) [... 205 5e-52
gb|AAK41033.1| Conserved hypothetical protein [Sulfolobus solfat... 205 5e-52
sp|Q9YCU5|YB67_AERPE HYPOTHETICAL PROTEIN APE1167 >gi|7516306|pi... 198 7e-50
emb|CAC12412.1| (AL445067) conserved hypothetical protein [Therm... 162 4e-39
dbj|BAA91905.1| (AK001779) unnamed protein product [Homo sapiens] 94 1e-18
gb|AAF63104.1|AC006423_5 (AC006423) Unknown protein [Arabidopsis... 91 1e-17
gb|AAF50645.1| (AE003561) CG8549 gene product [Drosophila melano... 90 2e-17
gi|6323050 Ylr022cp [Saccharomyces cerevisiae] >gi|2501598|sp|Q0... 86 3e-16
gi|7705811 CGI-97 protein [Homo sapiens] >gi|6686182|sp|Q9Y3A5|Y... 85 5e-16
sp|O14179|YDS3_SCHPO HYPOTHETICAL 28.1 KD PROTEIN C4F8.03 IN CHR... 76 3e-13
emb|CAB90128.1| (AL355012) conserved hypothetical UPF0023 family... 71 2e-11
>pir||C75181 hypothetical protein PAB0418 - Pyrococcus abyssi (strain Orsay)
>gi|5458040|emb|CAB49530.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 236
Score = 470 bits (1196), Expect = e-132
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 1 MPISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKAS 60
MPISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKAS
Sbjct: 1 MPISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKAS 60
Query: 61 EKEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYP 120
EKEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYP
Sbjct: 61 EKEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYP 120
Query: 121 HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAY 180
HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAY
Sbjct: 121 HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAY 180
Query: 181 GEVRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKGL 236
GEVRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKGL
Sbjct: 181 GEVRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKGL 236
>sp|O59220|YF52_PYRHO HYPOTHETICAL PROTEIN PH1552 >gi|7519190|pir||H71032 hypothetical
protein PH1552 - Pyrococcus horikoshii
>gi|3257981|dbj|BAA30664.1| (AP000006) 236aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 236
Score = 456 bits (1160), Expect = e-127
Identities = 225/236 (95%), Positives = 232/236 (97%)
Query: 1 MPISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKAS 60
MPISVDKAVIARLK+ GETFEILVDPYLARDFKEGK VPIEEILATPYVFKDAHKGDKAS
Sbjct: 1 MPISVDKAVIARLKIQGETFEILVDPYLARDFKEGKNVPIEEILATPYVFKDAHKGDKAS 60
Query: 61 EKEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYP 120
EKEMEKIFGTSDPYEVAKIIL+KGEVQLTAQQRREMLEEKKRQIATIIH+HAVDPRTGYP
Sbjct: 61 EKEMEKIFGTSDPYEVAKIILKKGEVQLTAQQRREMLEEKKRQIATIIHKHAVDPRTGYP 120
Query: 121 HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAY 180
HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKA+RR+LPLRIEMKVIAVKIP EYVGR+Y
Sbjct: 121 HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKALRRVLPLRIEMKVIAVKIPGEYVGRSY 180
Query: 181 GEVRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKGL 236
GEVRKFGRIKKEEW SDGSW+FLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKGL
Sbjct: 181 GEVRKFGRIKKEEWGSDGSWMFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKGL 236
>sp|Q58011|Y592_METJA HYPOTHETICAL PROTEIN MJ0592 >gi|2128397|pir||H64373 hypothetical
protein MJ0592 - Methanococcus jannaschii
>gi|1592297|gb|AAB98586.1| (U67508) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 240
Score = 266 bits (673), Expect = 2e-70
Identities = 125/231 (54%), Positives = 175/231 (75%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
+S+++AVIAR HGE FEILVDPYLA KEG+ V +E+LA VF+DA KG+KA E+
Sbjct: 7 VSLEEAVIARYTSHGEKFEILVDPYLAAKLKEGQNVDFDELLAIEVVFRDASKGEKAPEE 66
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
+ KIFGT+D E+AK I+ KG+VQLTA+QR E+ E+KKRQI TII R+ ++P+T PHP
Sbjct: 67 LLSKIFGTTDVKEIAKKIILKGQVQLTAKQREEIREQKKRQIITIISRNTINPQTDTPHP 126
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYGE 182
RI +AMEE+ + +DI+K AE QV +++K ++++LP+R E + IAVKIP+E+ +AY
Sbjct: 127 PHRIEKAMEELRINIDIYKSAEEQVPEIVKKLKKVLPIRFEKRDIAVKIPAEFASKAYNA 186
Query: 183 VRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIER 233
+ +FG +K+EEW DGS + LIEIP G+E EFY LN +TKGN QTK++++
Sbjct: 187 LYQFGAVKQEEWQPDGSLIVLIEIPSGIEAEFYAHLNKITKGNVQTKVVKK 237
>gi|11498102 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|6647937|sp|O29759|Y491_ARCFU HYPOTHETICAL PROTEIN
AF0491 >gi|7483017|pir||C69311 conserved hypothetical
protein AF0491 - Archaeoglobus fulgidus
>gi|2650135|gb|AAB90746.1| (AE001070) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 234
Score = 264 bits (667), Expect = 8e-70
Identities = 127/233 (54%), Positives = 169/233 (72%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
+S+DKAVIARL+ GE FE+LVDPYLARD KEGKEV E++LA VFKDA KG++AS
Sbjct: 2 VSLDKAVIARLRKGGEEFEVLVDPYLARDLKEGKEVNFEDLLAAEEVFKDAKKGERASVD 61
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
E+ KIFGT D +E+A+ I+ +GEVQ+TA+QRREMLE K++QI I R+ +DPRT PHP
Sbjct: 62 ELRKIFGTDDVFEIARKIILEGEVQITAEQRREMLEAKRKQIINFISRNTIDPRTNAPHP 121
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYGE 182
RI RA+EE V +DIFK EAQV+D++KA++ ILPL+ E IA+KIP E+ GRA
Sbjct: 122 PSRIERALEEAKVHIDIFKSVEAQVKDIVKALKPILPLKFEEMEIAIKIPPEHTGRAISA 181
Query: 183 VRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERKG 235
+ FG + +EEW DGSW+ ++ IP G+ + + L + KG A TK++ R G
Sbjct: 182 LYNFGGVTREEWQRDGSWICVMRIPSGMYGDLMDLLGKVAKGEALTKVLRRIG 234
>sp|O26781|Y685_METTH HYPOTHETICAL PROTEIN MTH685 >gi|7482238|pir||C69191 conserved
hypothetical protein MTH685 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621770|gb|AAB85190.1| (AE000848) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 232
Score = 255 bits (644), Expect = 4e-67
Identities = 121/231 (52%), Positives = 170/231 (73%), Gaps = 1/231 (0%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFK-EGKEVPIEEILATPYVFKDAHKGDKASE 61
+S++ AVIARL+ HGE FE+LVDP LA +F+ E +V +E++LA VF+DA KGDKASE
Sbjct: 2 VSLEDAVIARLESHGERFEVLVDPDLAAEFRREDSDVSVEDVLAVQEVFRDARKGDKASE 61
Query: 62 KEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPH 121
+ M K+F T+DP EV +ILR+G +QLTA+QRR+M+E+K+ +I I R A++P+ G PH
Sbjct: 62 EAMRKVFETADPLEVTPVILRRGTIQLTAEQRRQMIEDKRLKIINKIAREAINPQNGLPH 121
Query: 122 PVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYG 181
P RI +AMEE V VD FK + QV V+KAIR +P++ E +A+KIP E G AYG
Sbjct: 122 PPKRIEKAMEEARVHVDPFKTVDEQVNIVLKAIRTKIPIKFEKVRVAIKIPGERAGSAYG 181
Query: 182 EVRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIE 232
+ FG+I EEW +DGSW+ ++EIPGG+++ FY+KL+ LT GN +T+LI+
Sbjct: 182 VISNFGKITNEEWQNDGSWIAVVEIPGGLQDSFYQKLSELTGGNVETRLIK 232
>gb|AAG19629.1| (AE005051) Vng1276c [Halobacterium sp. NRC-1]
Length = 241
Score = 209 bits (526), Expect = 3e-53
Identities = 93/234 (39%), Positives = 161/234 (68%), Gaps = 2/234 (0%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGK-EVPIEEILATPYVFKDAHKGDKASE 61
IS+D AV ARL+ HGE FE+LVDP A + + + + + +++A VF++A +GD+ +E
Sbjct: 2 ISLDDAVTARLETHGERFEVLVDPDAALEMRRDEFDGELTDVIAARDVFENASRGDRPAE 61
Query: 62 KEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRT-GYP 120
++E +FGT++P E+ ++ +GE+Q+TA QR M + KKR + I R+A++P+ G P
Sbjct: 62 SDLETVFGTTEPLEIIPEVIGQGEIQITADQREAMQQRKKRSLINTISRNAINPQMDGAP 121
Query: 121 HPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAY 180
HP DRI A++E G VD A+ QV D ++A+R ++P+R E +AV++P++Y G
Sbjct: 122 HPPDRIESALDEAGFTVDPMTPADEQVDDALEALRPVIPIRFEEMTVAVQLPADYAGSGQ 181
Query: 181 GEVRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERK 234
++R+FG +++EEW +DGSW+ +I P G+++EFY ++N +++GN +T +++ K
Sbjct: 182 AKLREFGELEREEWQADGSWVGVITFPAGMQDEFYGRVNEVSEGNGETSVVKDK 235
>emb|CAB57566.1| (Y18930) proteasome alpha subunit (C-terminus) [Sulfolobus
solfataricus]
Length = 233
Score = 205 bits (515), Expect = 5e-52
Identities = 92/224 (41%), Positives = 148/224 (66%)
Query: 9 VIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEKEMEKIF 68
VI + + HGE FEIL P A F+ GK + + +++ + ++KD KG KAS ++K+F
Sbjct: 8 VIVKYESHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKKVF 67
Query: 69 GTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHPVDRILR 128
GT+D + K IL KGE+ +TA+QR+EMLE K++QI IHR+AVDP+T P P R+
Sbjct: 68 GTTDFETIVKEILLKGELPVTAEQRKEMLETKRKQIIDFIHRNAVDPKTNLPIPPTRLEM 127
Query: 129 AMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYGEVRKFGR 188
AME+ +++D+ KD EAQ ++K I +I+P++I ++++K+PSEY + ++ G
Sbjct: 128 AMEQARIQIDLNKDVEAQAMQIVKEISKIIPIKIARALLSIKVPSEYSSKVKSQLHNLGE 187
Query: 189 IKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIE 232
+KK W DG+ L +EIP G +++ +KLN+LTKG + K+++
Sbjct: 188 VKKANWLEDGTLLAELEIPAGAQQDVIDKLNSLTKGEVEVKVLQ 231
>gb|AAK41033.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 233
Score = 205 bits (515), Expect = 5e-52
Identities = 92/224 (41%), Positives = 148/224 (66%)
Query: 9 VIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEKEMEKIF 68
VI + + HGE FEIL P A F+ GK + + +++ + ++KD KG KAS ++K+F
Sbjct: 8 VIVKYESHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKKVF 67
Query: 69 GTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHPVDRILR 128
GT+D + K IL KGE+ +TA+QR+EMLE K++QI IHR+AVDP+T P P R+
Sbjct: 68 GTTDFETIVKEILLKGELPVTAEQRKEMLETKRKQIIDFIHRNAVDPKTNLPIPPTRLEM 127
Query: 129 AMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYGEVRKFGR 188
AME+ +++D+ KD EAQ ++K I +I+P++I ++++K+PSEY + ++ G
Sbjct: 128 AMEQARIQIDLNKDVEAQAMQIVKEISKIIPIKIARALLSIKVPSEYSSKVKSQLHNLGE 187
Query: 189 IKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIE 232
+KK W DG+ L +EIP G +++ +KLN+LTKG + K+++
Sbjct: 188 VKKANWLEDGTLLAELEIPAGAQQDVIDKLNSLTKGEVEVKVLQ 231
>sp|Q9YCU5|YB67_AERPE HYPOTHETICAL PROTEIN APE1167 >gi|7516306|pir||B72587 hypothetical
protein APE1167 - Aeropyrum pernix (strain K1)
>gi|5104838|dbj|BAA80152.1| (AP000061) 225aa long
hypothetical protein [Aeropyrum pernix]
Length = 225
Score = 198 bits (497), Expect = 7e-50
Identities = 97/221 (43%), Positives = 150/221 (66%)
Query: 10 IARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEKEMEKIFG 69
+A ++V G+ FEILV P LA +KE +V +E++L T +++D KG KAS +E++K FG
Sbjct: 1 MAWMEVRGKRFEILVRPELAFRYKEKGDVDLEDVLWTDTIYRDVRKGLKASPEEVKKAFG 60
Query: 70 TSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHPVDRILRA 129
TSDP VA+ IL++GE+QLT +QRR +LE K+RQI + I R+A+DP TG P P RI A
Sbjct: 61 TSDPRRVAEKILKEGEIQLTEEQRRRLLEAKRRQIISYIARNAIDPTTGRPIPEARIEAA 120
Query: 130 MEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYGEVRKFGRI 189
+EEV +++++DAE+Q + ++ I R++P+R+ ++ VKIP + GRAY + + G +
Sbjct: 121 LEEVRFPINLWRDAESQAVEAVRLIARVMPIRLARALLEVKIPPPHSGRAYQALMRMGEV 180
Query: 190 KKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKL 230
KK +W DGS +EIP G + E ++ AL +G A+ K+
Sbjct: 181 KKADWLPDGSLKAELEIPAGAQVEVTSRIQALARGAAEVKV 221
>emb|CAC12412.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 187
Score = 162 bits (405), Expect = 4e-39
Identities = 83/185 (44%), Positives = 125/185 (66%), Gaps = 1/185 (0%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
+ V+ A++ARL+ HG FEILVDP ++G + IE LA P V+KD KG+KAS+
Sbjct: 2 VKVEDAIVARLESHGYHFEILVDPDAIERIRKGN-IDIENDLAFPEVYKDVRKGEKASDD 60
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
+++ F T+ +VA I++KG++QLT +QRREM +E+++QI +I R ++P+T PH
Sbjct: 61 SLKEAFKTTVIAQVAIEIVKKGQIQLTTEQRREMYDERRKQIVNLIAREGINPQTNTPHT 120
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEYVGRAYGE 182
RI +AM+E V++D K AE QVQ+V+KAI I+P+R+E IAVK+ + G+ YGE
Sbjct: 121 PYRISQAMDEAKVKIDPLKPAEDQVQNVLKAIMPIIPIRLEKAKIAVKLIGDAYGKLYGE 180
Query: 183 VRKFG 187
+ K G
Sbjct: 181 LAKSG 185
>dbj|BAA91905.1| (AK001779) unnamed protein product [Homo sapiens]
Length = 250
Score = 94.0 bits (230), Expect = 1e-18
Identities = 70/235 (29%), Positives = 116/235 (48%), Gaps = 7/235 (2%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
I + + R+K G+ FEI ++ G E ++E+L T VF + KG A ++
Sbjct: 10 IRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKE 69
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
++ FGT D E+ K IL KGEVQ++ ++R LE+ R IATI+ V+P T P+
Sbjct: 70 DLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYT 129
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPL-RIEMKVIAVKIPSEYVGRAYG 181
V I RAM+++ V K + Q +VIK ++ + + R M++ + +E G+
Sbjct: 130 VILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNE--GKKLK 187
Query: 182 EVRK--FGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERK 234
E K I+ E++ + LI+ G E E + TKG +++ K
Sbjct: 188 EKLKPLIKVIESEDYGQQLEIVCLID--PGCFREIDELIKKETKGKGSLEVLNLK 240
>gb|AAF63104.1|AC006423_5 (AC006423) Unknown protein [Arabidopsis thaliana]
Length = 370
Score = 90.9 bits (222), Expect = 1e-17
Identities = 47/163 (28%), Positives = 85/163 (51%)
Query: 10 IARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEKEMEKIFG 69
+ RLK G FEI ++ G E I+E+L + V+ + KG A K++ K FG
Sbjct: 19 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYSNVSKGVLAKSKDLMKSFG 78
Query: 70 TSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHPVDRILRA 129
+ D ++ IL KGE+Q+ ++R + R IATI+ + ++P T P+ + + R
Sbjct: 79 SDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQKTINPETQRPYTISMVERL 138
Query: 130 MEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIP 172
M E+ VD +++ Q DVI+ +++ P++ + + +P
Sbjct: 139 MHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTVP 181
>gb|AAF50645.1| (AE003561) CG8549 gene product [Drosophila melanogaster]
Length = 252
Score = 90.5 bits (221), Expect = 2e-17
Identities = 65/234 (27%), Positives = 110/234 (46%), Gaps = 3/234 (1%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
I + I RLK G+ FEI ++ E I+E+L T VF + KG A +
Sbjct: 11 IRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKGQAAKKD 70
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
E++K F +D E+ K IL KGE+Q++ ++R+ L+ + I + V+P T P+P
Sbjct: 71 ELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYP 130
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPL-RIEMKVIAVKIPSEYVGRAYG 181
I +++++ V + ++ + + IK ++ +P+ R MK+ E G+
Sbjct: 131 ASIIEKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSFAGKEGGGKLKE 190
Query: 182 EVRKFGR-IKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERK 234
V K ++ EEW L L+ PG E + TKG +L+E K
Sbjct: 191 SVVKLANAVEHEEWDEATLHLTLLIDPGQY-RVIDELVRNETKGKGLLELLELK 243
>gi|6323050 Ylr022cp [Saccharomyces cerevisiae]
>gi|2501598|sp|Q07953|YL22_YEAST HYPOTHETICAL 28.3 KD
PROTEIN IN PPR1-SNF7 INTERGENIC REGION
>gi|2131753|pir||S64849 hypothetical protein YLR022c -
yeast (Saccharomyces cerevisiae)
>gi|1360328|emb|CAA97545.1| (Z73194) ORF YLR022c
[Saccharomyces cerevisiae]
Length = 250
Score = 86.2 bits (210), Expect = 3e-16
Identities = 52/175 (29%), Positives = 102/175 (57%), Gaps = 4/175 (2%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
I + + RLK + FE+ +D+++G E ++E+L VF + KG A+++
Sbjct: 10 IKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLVANKE 69
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
+++K FGT++ +V + I+ KGE+QL+ ++R+ ML + ++ TI+ ++P + +P
Sbjct: 70 DLQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYP 129
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAI--RRILPL-RIEMKV-IAVKIPS 173
I +A++E+ I K A+ Q + IK + ++I+P+ R +MKV +A+ PS
Sbjct: 130 PTMIHKALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPS 184
>gi|7705811 CGI-97 protein [Homo sapiens] >gi|6686182|sp|Q9Y3A5|YC97_HUMAN
HYPOTHETICAL PROTEIN CGI-97
>gi|4929663|gb|AAD34092.1|AF151855_1 (AF151855) CGI-97
protein [Homo sapiens]
Length = 250
Score = 85.4 bits (208), Expect = 5e-16
Identities = 67/235 (28%), Positives = 113/235 (47%), Gaps = 7/235 (2%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
I + + R+K G+ FEI ++ E ++E+L T VF + KG A ++
Sbjct: 10 IRLTNVAVVRMKRAGKRFEIACYKNKVVGWRRAWEKDLDEVLQTHSVFVNVSKGQVAKKE 69
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
++ FGT D E+ K IL KGEVQ++ ++R L + R IAT + V+P T P+
Sbjct: 70 DLISAFGTDDQTEICKQILAKGEVQVSDKERHTQLGQMFRDIATFVADKCVNPETKGPYT 129
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPL-RIEMKVIAVKIPSEYVGRAYG 181
V I RAM+++ V K + Q +VIK ++ + + R M++ + +E G+
Sbjct: 130 VILIERAMKDIHYLVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNE--GKKLK 187
Query: 182 EVRK--FGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTKLIERK 234
E K I+ E++ + LI+ G E E + TKG +++ K
Sbjct: 188 EKLKPLIKVIESEDYGQQLEIVCLID--PGCFREIDELIKKETKGKGSLEVLNLK 240
>sp|O14179|YDS3_SCHPO HYPOTHETICAL 28.1 KD PROTEIN C4F8.03 IN CHROMOSOME I
>gi|7492059|pir||T38833 hypothetical UPF0023 family
protein - fission yeast (Schizosaccharomyces pombe)
>gi|2330820|emb|CAB11050.1| (Z98530) hypothetical
UPF0023 family protein [Schizosaccharomyces pombe]
Length = 246
Score = 76.1 bits (184), Expect = 3e-13
Identities = 54/229 (23%), Positives = 106/229 (45%), Gaps = 7/229 (3%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
I + + + K G+ FE+ +++ E ++E+L VF + KG AS +
Sbjct: 10 IRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSKGHVASRQ 69
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
+++K FGT D ++ IL+KG+ Q+ ++R + R I + + +DP + P+P
Sbjct: 70 DLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNSKRPYP 129
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSEY-VGRAYG 181
I +A+ + G V K A++Q + IK ++ + I + ++I + G+A
Sbjct: 130 ASIIEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVDVKQGKALR 189
Query: 182 E-VRKFGRIKKEEWASDGSWLFLIEIPGGVEEEFYEKLNALTKGNAQTK 229
E +R +EE D + IPG Y+ ++ L + + +
Sbjct: 190 ERLRSLADEIEEENIDDEYECIALVIPGN-----YKLIDELVRNETKNR 233
>emb|CAB90128.1| (AL355012) conserved hypothetical UPF0023 family protein
[Schizosaccharomyces pombe]
Length = 154
Score = 70.6 bits (170), Expect = 2e-11
Identities = 38/144 (26%), Positives = 72/144 (49%)
Query: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
I + + + K G+ FE+ +++ E ++E+L VF + KG AS +
Sbjct: 10 IRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSKGHVASRQ 69
Query: 63 EMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHP 122
+++K FGT D ++ IL+KG+ Q+ ++R + R I + + +DP + P+P
Sbjct: 70 DLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNSKRPYP 129
Query: 123 VDRILRAMEEVGVRVDIFKDAEAQ 146
I +A+ + G V K A++Q
Sbjct: 130 ASIIEKALSDCGFSVSTSKTAKSQ 153
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.139 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87312505
Number of Sequences: 2977
Number of extensions: 3640380
Number of successful extensions: 9397
Number of sequences better than 1.0e-10: 17
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9376
Number of HSP's gapped (non-prelim): 17
length of query: 236
length of database: 189,106,746
effective HSP length: 56
effective length of query: 180
effective length of database: 155,591,474
effective search space: 28006465320
effective search space used: 28006465320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)