BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0434 (PAB0434) DE:ATP-BINDING TRANSPORT PROTEIN
(244 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 475 e-133
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 407 e-113
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 319 1e-86
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 244 6e-64
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 198 5e-50
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 197 9e-50
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 197 9e-50
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 188 5e-47
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 185 5e-46
pir||G72598 probable ABC transporter ATP-binding protein APE1255... 184 9e-46
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 183 2e-45
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 182 3e-45
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 180 1e-44
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 179 3e-44
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 179 3e-44
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 178 4e-44
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 178 7e-44
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 177 9e-44
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 177 9e-44
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 176 3e-43
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 175 4e-43
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 173 1e-42
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 173 2e-42
pir||T44443 gliding motility protein [imported] - Flavobacterium... 171 7e-42
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 170 1e-41
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 169 3e-41
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 168 4e-41
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 168 6e-41
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 168 8e-41
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 167 1e-40
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 167 1e-40
pir||B75459 sodium extrusion protein NatA - Deinococcus radiodur... 166 3e-40
pir||B72582 probable nodulation ATP-binding protein APE1934 - Ae... 164 7e-40
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 164 9e-40
pir||A83142 probable ATP-binding component of ABC transporter PA... 163 2e-39
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC... 162 3e-39
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 162 3e-39
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 162 4e-39
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 162 4e-39
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 161 6e-39
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 160 2e-38
pir||T36741 probable ABC-type transport system ATP-binding prote... 160 2e-38
pir||T36505 probable ABC-type transport system ATP-binding compo... 159 3e-38
dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kas... 159 3e-38
gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporte... 159 3e-38
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 159 4e-38
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 158 5e-38
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 158 6e-38
pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [i... 157 1e-37
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 157 1e-37
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 156 2e-37
pir||T36344 probable ABC-type transport system ATP-binding prote... 156 2e-37
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 156 2e-37
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 156 2e-37
emb|CAB95908.1| (AL359988) putative ABC transport system ATP-bin... 155 3e-37
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 155 3e-37
pir||G82707 ABC transporter ATP-binding protein XF1223 [imported... 155 3e-37
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 155 4e-37
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 155 6e-37
pir||C83188 probable ATP-binding component of ABC transporter PA... 155 6e-37
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 153 1e-36
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 153 2e-36
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 153 2e-36
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 153 2e-36
pir||T36523 probable ABC-type transport system ATP-binding prote... 153 2e-36
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 153 2e-36
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 152 3e-36
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 152 3e-36
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 152 4e-36
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 152 5e-36
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 151 6e-36
pir||B83294 probable ATP-binding component of ABC transporter PA... 151 8e-36
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 150 1e-35
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 150 1e-35
pir||T50566 probable ABC-type transport protein, ATP-binding com... 150 1e-35
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 150 1e-35
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 150 1e-35
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 150 2e-35
pir||C70529 probable ABC transporter - Mycobacterium tuberculosi... 150 2e-35
pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aerugin... 150 2e-35
pir||S32908 hypothetical protein 4 - Streptomyces antibioticus >... 149 2e-35
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 149 3e-35
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 149 3e-35
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 149 3e-35
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 149 3e-35
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 149 3e-35
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 148 4e-35
pir||D70984 probable drrA protein - Mycobacterium tuberculosis (... 148 4e-35
gb|AAD43475.1|AF125260_3 (AF125260) NosF [Rhodobacter sphaeroide... 148 4e-35
emb|CAC11378.1| (AL445063) gliding motility protein related [The... 147 1e-34
pir||S73019 daunorubicin resistance protein drrA - Mycobacterium... 146 3e-34
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 146 3e-34
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 146 3e-34
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding ... 145 4e-34
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 145 5e-34
gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; Nos... 145 5e-34
pir||F72742 probable transport ATP-binding protein APE0471 - Aer... 145 6e-34
emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus] 144 8e-34
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 143 1e-33
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 143 1e-33
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 143 2e-33
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 143 2e-33
gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporte... 143 2e-33
pir||S74476 ABC-type transport protein slr1113 - Synechocystis s... 142 4e-33
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 142 4e-33
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 142 4e-33
pir||H70610 probable ABC-typetransmembrane transport portein - M... 141 5e-33
gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus ... 141 9e-33
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 140 1e-32
pir||F72230 ABC transporter, ATP-binding protein - Thermotoga ma... 140 1e-32
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 139 3e-32
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 139 3e-32
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 139 4e-32
pir||I40516 spaF protein - Bacillus subtilis 139 4e-32
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 139 4e-32
gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis] 139 4e-32
dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes] 139 4e-32
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 138 5e-32
pir||T44662 nosF protein [imported] - Bradyrhizobium japonicum >... 138 5e-32
emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans] 138 6e-32
pir||E72636 probable nodulation ATP-binding protein I APE1548 - ... 138 8e-32
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 138 8e-32
dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein)... 138 8e-32
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 136 2e-31
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 136 3e-31
pir||T35090 probable ABC transport ATP-binding subunit - Strepto... 135 5e-31
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 134 7e-31
pir||S47705 hypothetical protein f648 - Escherichia coli >gi|912... 134 7e-31
sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 134 7e-31
pir||T36764 probable ABC-type transport system ATP-binding prote... 134 7e-31
gb|AAF04137.1|AF191033_5 (AF191033) hypothetical ABC transporter... 134 7e-31
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 134 9e-31
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 134 9e-31
sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN EC... 134 1e-30
gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans] 132 5e-30
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 131 1e-29
emb|CAB88481.1| (AL353816) putative ABC transport system ATP-bin... 131 1e-29
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 130 1e-29
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 130 2e-29
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF ... 129 2e-29
gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1] 129 2e-29
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 129 3e-29
pir||C75310 ABC transporter, ATP-binding protein - Deinococcus r... 129 3e-29
pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis eleg... 129 4e-29
dbj|BAB10070.1| (AB010069) contains similarity to ABC transporte... 129 4e-29
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 129 4e-29
pir||B70394 ABC transporter - Aquifex aeolicus >gi|2983576|gb|AA... 128 5e-29
pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elega... 128 5e-29
pir||T07717 probable ABC-type transport protein T23J7.110 - Arab... 128 5e-29
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 128 7e-29
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 128 7e-29
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 128 7e-29
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082... 127 9e-29
sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|218242... 127 9e-29
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 127 9e-29
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 127 9e-29
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 127 1e-28
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 127 2e-28
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 127 2e-28
pir||G75548 ABC transporter, ATP-binding protein - Deinococcus r... 127 2e-28
pir||S71363 probable ATP-binding cassette transporter ABC-3 - hu... 126 2e-28
gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-bind... 126 2e-28
gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus ... 126 2e-28
dbj|BAB10074.1| (AB010069) contains similarity to ABC transporte... 126 2e-28
gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sa... 126 2e-28
pir||C81208 ABC transporter, ATP-binding protein NMB0356 [import... 125 3e-28
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 125 5e-28
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 125 5e-28
sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|... 125 6e-28
gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphy... 125 6e-28
pir||H81784 probable ABC transporter ATP-binding protein NMA2131... 125 6e-28
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 124 1e-27
gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-bin... 124 1e-27
gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens] 124 1e-27
emb|CAA75729.1| (Y15635) ABCR [Homo sapiens] 124 1e-27
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis ... 124 1e-27
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANS... 124 1e-27
pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana... 124 1e-27
dbj|BAB03898.1| (AP001507) ABC transporter (ATP-binding protein)... 124 1e-27
gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sa... 124 1e-27
gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo... 123 1e-27
gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; predic... 123 1e-27
gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [... 123 1e-27
gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 ... 123 1e-27
pir||S42925 probable transport protein - Staphylococcus aureus >... 123 2e-27
emb|CAB99138.1| (AL390188) putative ABC transport system ATP-bin... 123 2e-27
gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-bind... 123 2e-27
gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens] 123 2e-27
gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transpo... 123 2e-27
gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sa... 123 2e-27
pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) P... 122 3e-27
emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-b... 122 3e-27
pir||G82993 probable ATP-binding/permease fusion ABC transporter... 122 3e-27
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 122 4e-27
pir||D71179 probable sugar ABC transporter - Pyrococcus horikosh... 122 4e-27
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 122 5e-27
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop... 122 5e-27
gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melano... 122 5e-27
gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum] 121 7e-27
gi|10957143 Potential ABC transporter [Lactococcus lactis] >gi|1... 121 7e-27
gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melano... 121 7e-27
gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanog... 121 7e-27
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 121 9e-27
gi|4557876 ATP-binding cassette, sub-family A member 4; ATP bind... 121 9e-27
pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis e... 121 9e-27
pir||T42749 ATP-binding cassette transport protein homolog - Cae... 121 9e-27
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOS... 121 9e-27
emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF0... 121 9e-27
emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF0... 121 9e-27
emb|CAC05759.1| (AL391751) putative ABC transporter ATP-binding ... 120 1e-26
gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein ... 120 2e-26
gb|AAC48716.1| (U90126) ABC transporter [Bos taurus] 120 2e-26
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 120 2e-26
pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf... 120 2e-26
dbj|BAB05306.1| (AP001512) iron(III) dicitrate transport system ... 120 2e-26
dbj|BAB04910.1| (AP001511) ABC transporter (ATP-binding protein)... 119 3e-26
sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 118 4e-26
pir||T36064 ABC-type transport system ATP-binding protein - Stre... 118 4e-26
pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elega... 118 6e-26
gb|AAC43327.1| (U17255) NisF [Lactococcus lactis] >gi|1095449|pr... 117 1e-25
pir||C71220 probable sugar-binding transport ATP-binding protein... 117 1e-25
pir||T35757 probable branched chain amino acid transport ATP-bin... 117 1e-25
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 116 2e-25
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 116 3e-25
dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-bindi... 116 3e-25
pir||S42927 probable transport protein - Staphylococcus epidermi... 115 5e-25
sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64... 115 5e-25
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 115 5e-25
pir||S42931 probable transport protein stpB - Staphylococcus hom... 114 9e-25
pir||F70501 probable ABC-typetransport protein - Mycobacterium t... 114 9e-25
gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis] 114 1e-24
pir||G71486 probable ABC transporter ATPase - Chlamydia trachoma... 114 1e-24
pir||T29454 ABC transport protein - Streptomyces coelicolor >gi|... 114 1e-24
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 114 1e-24
pir||E81023 ABC transporter, ATP-binding protein NMB1948 [import... 114 1e-24
gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [... 113 2e-24
emb|CAC11868.1| (AL445065) ATP-binding protein related resistanc... 113 2e-24
dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.] 113 2e-24
dbj|BAB05182.1| (AP001512) ABC transporter (ATP-binding protein)... 113 2e-24
gi|9964444 AMV130 [Amsacta moorei entomopoxvirus] >gi|9944653|gb... 112 4e-24
pir||A48362 hypothetical protein 280 (rpoN 5' region) - Alcalige... 111 6e-24
pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AA... 111 6e-24
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 111 6e-24
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 111 8e-24
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 111 8e-24
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 111 1e-23
sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 111 1e-23
pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealy... 111 1e-23
pir||E81968 probable ABC transport ATP-binding subunit NMA0504 [... 111 1e-23
gi|11498005 ABC transporter, ATP-binding protein [Archaeoglobus ... 110 1e-23
pir||D82147 amino acid ABC transporter, ATP-binding protein VC18... 110 2e-23
pir||F81363 probable glutamine transport ATP-binding protein Cj0... 109 2e-23
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 109 3e-23
pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 ... 109 3e-23
gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, A... 109 3e-23
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 109 4e-23
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 109 4e-23
pir||G83605 probable ATP-binding component of ABC transporter PA... 108 7e-23
gb|AAK42722.1| ABC transporter, ATP binding protein [Sulfolobus ... 108 9e-23
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 107 1e-22
emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stu... 107 1e-22
sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 107 1e-22
emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding ... 107 1e-22
gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacte... 106 2e-22
gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus ... 105 6e-22
pir||G71842 probable ABC transporter, ATP-binding protein - Heli... 105 6e-22
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 105 6e-22
sp|P75444|YD34_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 104 7e-22
pir||C69993 ABC transporter (ATP-binding protein) homolog ythP -... 104 7e-22
pir||D64672 ABC transporter, ATP-binding protein - Helicobacter ... 104 7e-22
pir||T34822 ABC-transporter ATP binding protein - Streptomyces c... 104 7e-22
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 104 1e-21
gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus ... 104 1e-21
dbj|BAA28336.1| (AB010294) ATP binding component of ABC-transpor... 104 1e-21
emb|CAB97433.1| (AL389898) putative glycine betaine ABC transpor... 104 1e-21
dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein)... 104 1e-21
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 104 1e-21
gi|10954682 probable mikimopine transporter gene~similar to potA... 103 2e-21
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 103 2e-21
pir||F71163 probable oligopeptide transport ATP-binding protein ... 102 3e-21
sp|P55662|Y4TH_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 102 4e-21
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 102 5e-21
pir||H82808 toluene tolerance protein XF0421 [imported] - Xylell... 102 5e-21
emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coe... 102 5e-21
gb|AAD05459.1| (AF064070) putative ABC-2 transporter hydrophilic... 101 6e-21
pir||D75142 oligopeptide transport ATP-binding protein appf PAB0... 101 6e-21
dbj|BAA89347.1| (AB032934) orfC [Vibrio alginolyticus] 101 6e-21
sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 101 8e-21
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 101 8e-21
pir||A27835 histidine transport protein hisP - Escherichia coli ... 101 1e-20
gi|11497707 nitrate ABC transporter, ATP-binding protein (nrtC-1... 101 1e-20
pir||T46652 ABC transporter ZurA [imported] - Listeria monocytog... 101 1e-20
gb|AAK43187.1| ABC transporter, ATP binding protein, putative [S... 100 1e-20
pir||E83087 probable ATP-binding component of ABC transporter PA... 100 1e-20
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 100 2e-20
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 100 2e-20
sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PR... 99 3e-20
emb|CAB65561.1| (AL136058) probable amino acid ABC transporter p... 99 3e-20
gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeri... 99 4e-20
sp|P32721|ALSA_ECOLI D-ALLOSE TRANSPORT ATP-BINDING PROTEIN ALSA... 99 6e-20
pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permeas... 99 6e-20
sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 99 6e-20
sp|P02915|HISP_SALTY HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 98 7e-20
pir||T36288 probable ABC-type transport system ATP-binding chain... 98 1e-19
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 97 2e-19
gb|AAC43181.1| (U00006) matches PS00017: ATP/GTP-binding site mo... 97 2e-19
pir||F72485 probable high-affinity branched-chain amino acid tra... 97 2e-19
pir||A72371 oligopeptide ABC transporter, ATP-binding protein - ... 96 4e-19
pir||C48518 ABC-type transport protein (PEB1 5' region) - Campyl... 96 5e-19
dbj|BAA08932.1| (D50453) glycine betain/L-proline transport ATPa... 96 5e-19
pir||H72704 probable iron (III) dicitrate transport ATP-binding ... 96 5e-19
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 95 6e-19
gi|11497712 sulfate ABC transporter, ATP-binding protein (cysA) ... 94 1e-18
pir||F81929 probable iron-uptake permease ATP-binding protein NM... 94 1e-18
sp|P46920|OPAA_BACSU GLYCINE BETAINE TRANSPORT ATP-BINDING PROTE... 94 1e-18
pir||G72750 probable ABC transporter ATP-binding protein APE0532... 94 1e-18
pir||T19591 hypothetical protein C30H6.6 - Caenorhabditis elegan... 94 2e-18
pir||G83159 probable ATP-binding component of ABC transporter PA... 93 2e-18
gb|AAC46148.1| (U50597) YfeB [Yersinia pestis] 91 9e-18
gb|AAG09260.1| (AF176664) EppD [EDTA-degrading bacterium BNC1] 91 9e-18
gb|AAC68697.1| (AF097414) EfmC [Enterococcus faecium] 91 1e-17
gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874... 90 2e-17
sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BINDING P... 90 2e-17
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T... 90 2e-17
sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 90 3e-17
gi|10954675 probable mikimopine-lactam transporter gene~similar ... 90 3e-17
gb|AAD41066.1|AF128999_2 (AF128999) SitB [Salmonella typhimurium] 89 4e-17
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 89 4e-17
sp|P30769|MKL_MYCLE POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDIN... 89 5e-17
gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archa... 89 5e-17
dbj|BAB04876.1| (AP001511) ABC transporter (ATP-binding protein)... 88 8e-17
sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 88 1e-16
dbj|BAB04371.1| (AP001509) ABC transporter (ATP-binding protein)... 88 1e-16
pir||T35675 probable ABC-transport system ATP binding protein - ... 87 1e-16
pir||G71259 probable ABC transporter, ATP-binding protein - syph... 87 1e-16
pir||A82497 ribose ABC transporter, ATP-binding protein VCA0128 ... 87 1e-16
gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter... 87 2e-16
emb|CAB69805.1| (AJ243712) putative ABC-transporter [Bacillus ce... 87 2e-16
sp|P52648|ZNUC_ECOLI HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDIN... 86 3e-16
gb|AAD22683.1|AC007063_9 (AC007063) putative ABC transporter [Ar... 86 3e-16
pir||S30327 multidrug resistance protein 1 - Entamoeba histolyti... 85 5e-16
pir||C55581 nasD protein - Klebsiella pneumoniae 85 9e-16
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 85 9e-16
dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [O... 84 1e-15
sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 84 2e-15
pir||S76552 hypothetical protein - Synechocystis sp. (strain PCC... 84 2e-15
pir||C83009 probable ATP-binding component of ABC transporter PA... 84 2e-15
pir||S74879 phosphate transport ATP-binding protein pstB-3 - Syn... 83 2e-15
pir||D71550 probable ABC transporter ATPase - Chlamydia trachoma... 83 2e-15
dbj|BAB17113.1| (AP002866) putative white protein; ATP-binding c... 83 2e-15
emb|CAC14305.1| (AJ276209) putative ATP-binding protein of an AB... 83 2e-15
pir||T44799 iron transport ATP-binding protein irp1D [imported] ... 83 3e-15
pir||S30328 multidrug resistance protein 2 - Entamoeba histolyti... 83 4e-15
sp|Q47087|CBRD_ERWCH ACHROMOBACTIN TRANSPORT ATP-BINDING PROTEIN... 82 6e-15
pir||C81128 ABC transporter, ATP-binding protein NMB1051 [import... 82 6e-15
emb|CAA40742.1| (X57523) mtp1 [Rattus norvegicus] 82 8e-15
sp|P36370|TAP1_RAT ANTIGEN PEPTIDE TRANSPORTER 1 (APT1) >gi|1115... 82 8e-15
emb|CAA71284.1| (Y10235) Tap1 protein [Rattus norvegicus] 82 8e-15
pir||C82541 ABC transporter ATP-binding protein XF2568 [imported... 82 8e-15
pir||I56273 ATP-dependent transport protein SapT - Lactobacillus... 81 1e-14
pir||A81893 probable ABC transporter ATP-binding protein NMA1249... 81 1e-14
emb|CAB44978.1| (AJ242842) putative ATP-binding protein [Neisser... 81 1e-14
pir||H82224 probable vitamin B12 ABC transporter, ATP-binding pr... 81 1e-14
gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter A... 81 1e-14
dbj|BAB07212.1| (AP001519) ABC transporter (ATP-binding protein)... 81 1e-14
sp|P38053|SSUB_ECOLI PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP... 81 1e-14
pir||T44565 probable ATP-dependent transport protein [imported] ... 81 1e-14
emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lac... 80 2e-14
emb|CAA42178.1| (X59615) HAM-1 [Mus musculus] 80 2e-14
emb|CAA71279.1| (Y10230) Tap1 protein [Rattus norvegicus] >gi|17... 80 2e-14
emb|CAA71282.1| (Y10233) Tap1 protein [Rattus norvegicus] 80 2e-14
dbj|BAA90507.1| (AP001111) similar to ABC transporter of Arabido... 80 2e-14
gi|11498986 branched-chain amino acid ABC transporter, ATP-bindi... 80 2e-14
gb|AAB58723.2| (AF001156) TAP1 [Mesocricetus auratus] 80 2e-14
emb|CAC12404.1| (AL445067) oligopeptide ABC transporter, ABC-bin... 80 2e-14
gb|AAF73553.1| (AE002310) ABC transporter, ATP-binding protein [... 79 4e-14
pir||E82959 zinc transport protein ZnuC PA5500 [imported] - Pseu... 79 5e-14
emb|CAA71281.1| (Y10232) Tap1 protein [Rattus norvegicus] 78 7e-14
pir||B72369 ABC transporter, ATP-binding protein - Thermotoga ma... 78 7e-14
pir||H82417 ABC transporter, ATP-binding protein VCA0782 [import... 78 9e-14
emb|CAB45011.1| (AJ242839) putative ATP-binding protein [Neisser... 78 1e-13
emb|CAA11805.1| (AJ224003) ATP-dependent transporter [Carnobacte... 77 2e-13
pir||F36889 leuD 3'-region hypothetical protein - Lactococcus la... 77 2e-13
pir||T36808 probable sugar transport system ATP-binding chain - ... 77 2e-13
gb|AAF73656.1| (AE002196) ABC transporter, ATP-binding protein [... 77 2e-13
gi|11499941 ABC transporter, ATP-binding protein [Archaeoglobus ... 76 3e-13
pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC -... 76 4e-13
sp|P57403|ZNUC_BUCAI HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDIN... 76 4e-13
sp|Q02151|YLUD_LACLA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 76 5e-13
pir||T35854 probable ABC transporter ATP-binding subunit - Strep... 76 5e-13
pir||E82214 galactoside ABC transporter, ATP-binding protein VC1... 75 6e-13
pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) P... 75 8e-13
pir||T47649 ABC transporter-like protein - Arabidopsis thaliana ... 75 8e-13
gb|AAF15564.1|AF179375_1 (AF179375) ABC transporter protein [Myc... 75 1e-12
dbj|BAB06693.1| (AP001517) alkylphosphonate ABC tranporter (ATP-... 75 1e-12
pir||S72637 hypothetical ABC exporter component A - Thermoanaero... 74 1e-12
pir||T18344 P-glycoprotein E - Leishmania tropica >gi|1916606|gb... 74 1e-12
pir||E69098 phosphate transport system ATP-binding - Methanobact... 74 1e-12
pir||T30570 hypothetical protein - Bacillus megaterium (fragment... 74 2e-12
gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius] 74 2e-12
sp|P77509|YPHE_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 73 2e-12
sp|Q9ZCM4|Y700_RICPR HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 73 2e-12
pir||T47652 ABC transporter-like protein - Arabidopsis thaliana ... 73 2e-12
gb|AAF64044.1| (AF237699) glutamine ABC-transporter [Lactobacill... 73 2e-12
pir||E83154 probable ATP-binding component of ABC taurine transp... 72 7e-12
gb|AAA61983.1| (L13381) transport protein [Plasmodium falciparum] 71 9e-12
pir||T18376 multidrug resistance protein 2 - malaria parasite (... 71 9e-12
pir||T47650 ABC transporter-like protein - Arabidopsis thaliana ... 71 1e-11
dbj|BAA08631.1| (D49826) LipB [Serratia marcescens] 70 3e-11
pir||H82875 oligopeptide transport system permease protein UU559... 69 3e-11
pir||H81361 ABC transport system ATP-binding protein Cj0888c [im... 69 6e-11
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 475 bits (1209), Expect = e-133
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG
Sbjct: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL
Sbjct: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI
Sbjct: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA 240
KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA
Sbjct: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA 240
Query: 241 VKNV 244
VKNV
Sbjct: 241 VKNV 244
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 407 bits (1035), Expect = e-113
Identities = 205/226 (90%), Positives = 218/226 (95%)
Query: 19 VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVR 78
+KALRG++F IEEGEIFGLIGPNGAGKSTTLKILATLL PTGG+AEVFG DVVKEA EVR
Sbjct: 1 MKALRGITFSIEEGEIFGLIGPNGAGKSTTLKILATLLRPTGGKAEVFGFDVVKEADEVR 60
Query: 79 KLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTY 138
KLISYLPEEAGAYKRLTGLEYL+FMAKLYAKDSRKAEKMLKLGIELSGLG+RL DK+STY
Sbjct: 61 KLISYLPEEAGAYKRLTGLEYLKFMAKLYAKDSRKAEKMLKLGIELSGLGDRLRDKISTY 120
Query: 139 SKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNML 198
SKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR I+EFSKEGVTFLISSHNML
Sbjct: 121 SKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIREFSKEGVTFLISSHNML 180
Query: 199 EVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKNV 244
EVEYLCDRVALIHKG+I+EVG+P ELKE++ AENLEEVFMEAVKNV
Sbjct: 181 EVEYLCDRVALIHKGKIVEVGSPHELKEKHKAENLEEVFMEAVKNV 226
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 319 bits (810), Expect = 1e-86
Identities = 153/237 (64%), Positives = 196/237 (82%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV V +L K GK + L+G+SF+IEEGEIFGLIGPNGAGK+TTL+I++TL+ P+ G V
Sbjct: 3 AVVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTV 62
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FG +VV+E EVRKLISYLPEEAGAY+ + G+EYL F+A YA S + E+M++ E++
Sbjct: 63 FGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIA 122
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GLGE++ D+VSTYSKGMVR+LL+ARALMV P+LAILDEPTSGLD++NA E+R+ +K+ S+
Sbjct: 123 GLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQ 182
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
EG+T L+SSHNMLEVE+LCDR+ALIH G I+E GT ELKERY A+N+EEVF E VK
Sbjct: 183 EGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQNIEEVFEEVVK 239
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 244 bits (617), Expect = 6e-64
Identities = 125/238 (52%), Positives = 175/238 (73%), Gaps = 4/238 (1%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV+V+NL K G + L+G+SF +E GE+FG++GPNGAGK+TTL+ILA ++ G A+V
Sbjct: 9 AVSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKNFNGDAKV 68
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAK-DSRKAEKMLKLGIEL 124
FG ++ ++ ISY+PE+A Y++LTG E L+F A+LYAK D EK LKLGIE+
Sbjct: 69 FGLRPIE--AKQNGYISYMPEDAFPYEKLTGYENLDFYAELYAKGDKELKEKYLKLGIEI 126
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
+ LGER+ DK + YS+GM RRL++AR LMV PKL++LDEPTS LD+ +A IR I E +
Sbjct: 127 ANLGERIYDKTAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALDVESAVRIRNIILEMA 186
Query: 185 KE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
+ +T ++SSHNMLEVEYLCDR+ LI+ GRI+ G P+E+ + N++NLEE F++ V
Sbjct: 187 RRYNMTIILSSHNMLEVEYLCDRITLINDGRIVANGKPKEIIKSTNSKNLEEAFIKLV 244
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 198 bits (498), Expect = 5e-50
Identities = 106/246 (43%), Positives = 158/246 (64%), Gaps = 13/246 (5%)
Query: 4 VTAVAVSNLEKDYGK-----------VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKIL 52
+ + V NL K Y K +AL+G++F++++GE+FGL+GPNGAGK+TT+KIL
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 53 ATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPE-EAGAYKRLTGLEYLEFMAKLYAKDS 111
TLL P+ G A+V G DVVK+A E+RK I+ + E E Y RLT E L + A +Y
Sbjct: 61 TTLLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPR 120
Query: 112 RKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIM 171
R+AEK ++ +++ GL +R ND V YS+GM +RL +A+AL+ P++ LDEPT GLD+
Sbjct: 121 REAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 172 NAFEIRRTIKEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
+A +R ++ +EG T L+++H M E E LCDR+A+I G+I+ + TP LK
Sbjct: 181 SAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRN 240
Query: 231 ENLEEV 236
+ + EV
Sbjct: 241 DTIVEV 246
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 197 bits (496), Expect = 9e-50
Identities = 97/238 (40%), Positives = 151/238 (62%), Gaps = 1/238 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V ++ K +G+++AL +SF + EGE+ G+IG NGAGK+T ++I+A +LHP G V
Sbjct: 19 IEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRVG 78
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
GHDV ++ V+ +I YLPEE Y+R + L + +LY + + +EL G
Sbjct: 79 GHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELVG 138
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ +R D ++T+SKG+ +R+ +ARAL+ P + I DEPT GLD AF IR I++ K
Sbjct: 139 MTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFIRDL-KG 197
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKNV 244
T ++ +H M E EYLCDRVA+I++GRIL++GTP ELK + + + EV + + +V
Sbjct: 198 SKTMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELKSKIRGDLVLEVKVRDISSV 255
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 197 bits (496), Expect = 9e-50
Identities = 107/244 (43%), Positives = 155/244 (62%), Gaps = 13/244 (5%)
Query: 6 AVAVSNLEKDYGK-----------VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILAT 54
A+ V NL K Y K +AL+G++F +++GE+FGL+GPNGAGK+TT+KIL T
Sbjct: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
Query: 55 LLHPTGGRAEVFGHDVVKEASEVRKLISYLPE-EAGAYKRLTGLEYLEFMAKLYAKDSRK 113
LL PT G A V G D+VKEA E+RK I+ + E E Y RLT E L + A +Y +
Sbjct: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
Query: 114 AEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNA 173
AE+ ++ + + GL +R +D V YS+GM +RL +A+AL+ P++ LDEPT GLD+ +A
Sbjct: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
Query: 174 FEIRRTIKEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAEN 232
+R IK+ +E T L+++H M E E LCDR+A+I GRI+ + TP LK+ +
Sbjct: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
Query: 233 LEEV 236
+ EV
Sbjct: 243 IVEV 246
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 188 bits (473), Expect = 5e-47
Identities = 96/227 (42%), Positives = 145/227 (63%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V L KDYG +A+ GVSF+I GE+F L+GPNGAGK+TT+K+L+TLL PT G A +
Sbjct: 10 VVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWIA 69
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+ +V+E VR++I +P++ A ++G + + A+LY S +A + + ++
Sbjct: 70 GYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYLD 129
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E + +V+TYS GM R+L +A +L+ PK+ LDEPT GLD+ + + R I++ +
Sbjct: 130 LMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIEDLKRS 189
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
VT L+++H M E E L DRVA+I +GRI+ GTP ELK R E +
Sbjct: 190 AVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETV 236
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 185 bits (464), Expect = 5e-46
Identities = 95/223 (42%), Positives = 141/223 (62%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ V L K YGK KA+ +SF ++EG +FG +GPNGAGK+TT+ + ++ P G +
Sbjct: 3 AIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDVRI 62
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+D+ KE + ++ + +LPE A Y+ LT L+F A Y ++ EK ++ ++L
Sbjct: 63 LGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLKLV 122
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL + K T+SKGM +RLLLA+AL+ P+L ILDEPTSGLD A ++ I+E K
Sbjct: 123 GLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDIIREQRK 182
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+G T SSH + EVE L D+V +I KG++ VGT E+K++Y
Sbjct: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
>pir||G72598 probable ABC transporter ATP-binding protein APE1255 - Aeropyrum
pernix (strain K1) >gi|5104931|dbj|BAA80245.1|
(AP000061) 253aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 253
Score = 184 bits (462), Expect = 9e-46
Identities = 99/237 (41%), Positives = 142/237 (59%), Gaps = 3/237 (1%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV + K G L+ VS + G ++G++GPNGAGK+T + L L GR +
Sbjct: 12 AVEAEGVWKRLGGRWVLKDVSLTVPRGSVYGVVGPNGAGKTTLFRTLLGLYRADRGRVAL 71
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V + + + ++YLPE+ Y+ +TG E+L A +Y + E L+ LS
Sbjct: 72 LGEPVERAGGSLFRRVAYLPEDGEPYRNMTGHEFLRLYASIYGVED--LEGYLEEASRLS 129
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS- 184
GLG RL ++V +YSKGM RRLL+A L +KP LA+LDEPT+GLD + + IRR +KE+S
Sbjct: 130 GLGGRLGERVRSYSKGMRRRLLVAAMLALKPSLAVLDEPTAGLDPVYSVGIRRLLKEYSE 189
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
+ GVT L+SSHNM EVE +C + +I GRI+ G+P E R A +LEE ++ V
Sbjct: 190 RHGVTVLLSSHNMYEVESVCSEITMISSGRIVYSGSPGEAVRRTGASSLEEAYVALV 246
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 183 bits (459), Expect = 2e-45
Identities = 92/242 (38%), Positives = 148/242 (61%), Gaps = 8/242 (3%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
N++K YGK ++G+SF +++GE FGL+GPNGAGKSTT+ +++ L+ G V G+ +
Sbjct: 6 NIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITVGGYVI 65
Query: 71 VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
KE ++ ++ I +P+E Y LT E L F K+Y +A+K +E GL ER
Sbjct: 66 GKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEVLEYVGLTER 125
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTF 190
DK+ T+S GM RR+ + ALM KP+L I+DEPT G+D + I T+K+ ++ G+T
Sbjct: 126 AKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTV 185
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE--------NLEEVFMEAVK 242
+ +SH M EVE+LCDR+ +I +G ++ +GT +L R + + E F+ A++
Sbjct: 186 IYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTIIQLTVSGINEAFLVAIR 245
Query: 243 NV 244
++
Sbjct: 246 SL 247
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 182 bits (457), Expect = 3e-45
Identities = 94/222 (42%), Positives = 141/222 (63%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + NL K YGK KA+ +S ++E+G IFG +GPNGAGK+TT+ + ++ P G +
Sbjct: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+D+ KE + ++ + +LPE A Y+ LT L+F A Y ++ EK ++ ++L G
Sbjct: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + KV ++SKGM +RLLLA+AL+ P+L ILDEPTSGLD A ++ I E K+
Sbjct: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G T SSH + EVE L D+V +I KG++ VGT E+K++Y
Sbjct: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 180 bits (453), Expect = 1e-44
Identities = 94/225 (41%), Positives = 145/225 (63%), Gaps = 3/225 (1%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
NL K YG A+RGV+F + EGE+FG +GPNGAGK+TT+++L +L PT G+ V G+D+
Sbjct: 12 NLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVRVLGYDM 71
Query: 71 VKEASEV--RKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
+E ++ R+ + +PE A Y LT ++ L+ M +LY + EK ++L L
Sbjct: 72 TREPEKLKARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSIELLKLFELY 131
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGV 188
E+ N KV +SKGM +RL+LA A++ P+L LDEPTSGLD+++A I+ I++ K G
Sbjct: 132 EKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDIIRDEKKAGK 191
Query: 189 TFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
T +++HNM + LC+R+ +I KG+++ + TP LK R E+L
Sbjct: 192 TIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLK-RLTKEHL 235
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 179 bits (449), Expect = 3e-44
Identities = 97/227 (42%), Positives = 144/227 (62%), Gaps = 1/227 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ NL K +GK A+ ++F++ EGEIFG +GPNGAGKSTT+K+L T+L P+ G A V
Sbjct: 11 AIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATV 70
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+DV+K+ + VR+ I +P+E A + LTG E + MA LY R AE+ K +E+
Sbjct: 71 SGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMV 130
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L KV TYS GM RRL +A +L+ +P++ LDEPT GLD I + I + +
Sbjct: 131 ELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKE 190
Query: 186 E-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
E +T +++H + E + DR+A+I KG+IL +G+P+ELKE+ +
Sbjct: 191 EYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGD 237
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 179 bits (449), Expect = 3e-44
Identities = 97/227 (42%), Positives = 144/227 (62%), Gaps = 1/227 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ NL K +GK A+ ++F++ EGEIFG +GPNGAGKSTT+K+L T+L P+ G A V
Sbjct: 11 AIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATV 70
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+DV+K+ + VR+ I +P+E A + LTG E + MA LY R AE+ K +E+
Sbjct: 71 SGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMV 130
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L KV TYS GM RRL +A +L+ +P++ LDEPT GLD I + I + +
Sbjct: 131 ELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKE 190
Query: 186 E-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
E +T +++H + E + DR+A+I KG+IL +G+P+ELKE+ +
Sbjct: 191 EYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGD 237
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 178 bits (448), Expect = 4e-44
Identities = 99/237 (41%), Positives = 143/237 (59%), Gaps = 1/237 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V NL K +G +A++GVSF +++GEIF +GPNGAGK+TT+ +L TLL PT G+A V
Sbjct: 5 IVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVA 64
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
GHDV+KE EVR+ I + ++ + LT E + K+Y K +K + +E
Sbjct: 65 GHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFVE 124
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E + V T+S GM RRL +AR+L+ +P++ LDEPT GLD + I + KE
Sbjct: 125 LLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKE 184
Query: 187 -GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
+T +++H M E E L DRVA+I G+I+ +GTP ELK E + F EAV+
Sbjct: 185 HNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKEIIYVRFSEAVE 241
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 178 bits (446), Expect = 7e-44
Identities = 88/228 (38%), Positives = 140/228 (60%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV V L K YG + A++ +SF + GEIFGL+GPNGAGK+TT++ L TL P GG +
Sbjct: 10 AVQVKQLRKKYGAIPAVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCTLAKPDGGELWI 69
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G +V+ + + R+ + Y+ +E K LTG E L+ A LY D+ ++K + +++
Sbjct: 70 DGVNVLSDPRQARRRLGYVAQEVAIDKILTGRELLQLQASLYHLDAISSQKRIDQLLDIL 129
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL + K TYS G+ +RL LA L+ +P + +LDEP+ GLDI + F + +++
Sbjct: 130 GLTAYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESRFILWEFLRQLRD 189
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
G T +I+SH + E++ L DR+A+I +G ++ GTP ELK+R + +
Sbjct: 190 AGTTVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDRV 237
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 177 bits (445), Expect = 9e-44
Identities = 99/219 (45%), Positives = 141/219 (64%), Gaps = 1/219 (0%)
Query: 19 VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVR 78
++AL GV ++ G +F L+GPNGAGK+T +KIL+TLL P G A V G DVV+EA+ VR
Sbjct: 26 IRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLLPDSGWARVAGFDVVREANNVR 85
Query: 79 KLISY-LPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVST 137
I L E Y RL+G + L F ++LY R+A++ +K +E+ GL E + +V
Sbjct: 86 SRIGVVLGGERALYWRLSGWDNLWFFSQLYGIPPREAKRRVKELLEIVGLEEWAHVRVEN 145
Query: 138 YSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNM 197
YSKGM +RL +AR L+ P++ +LDEPT GLD A E+R I+ +EG T L+++H M
Sbjct: 146 YSKGMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAREVRSIIRRIVREGRTVLLTTHYM 205
Query: 198 LEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEV 236
+E E L DRVA+I KGRI+ G P +LK E++ E+
Sbjct: 206 VEAEELSDRVAIISKGRIVAEGPPEDLKSLVGGESVIEL 244
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 177 bits (445), Expect = 9e-44
Identities = 105/246 (42%), Positives = 147/246 (59%), Gaps = 14/246 (5%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ V V +L K YGK + + GV+F +EEGEIFG IGPNGAGK+TT+++L L+ P G A
Sbjct: 1 MSVVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLA 60
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
E+FG DV+KE E+RK + Y+P E Y +T E+L + A Y K K E
Sbjct: 61 EIFGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASFYEKVDWDYVK------E 114
Query: 124 LSGL-GERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLD--IMNA-FEIRRT 179
L G+ ++ S G +++ + +ALM +PKL ILDEPT+GLD + N FEI +
Sbjct: 115 LCGVFSLDTKKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEILKN 174
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK-ERYNAENLEEVFM 238
KE +G T SSH + EVE LCDRVA+I GRI+ V LK ERY ++ +
Sbjct: 175 EKE---KGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLKGERYKVVRVKGENL 231
Query: 239 EAVKNV 244
E +K++
Sbjct: 232 EKLKDL 237
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 176 bits (441), Expect = 3e-43
Identities = 104/220 (47%), Positives = 138/220 (62%), Gaps = 4/220 (1%)
Query: 19 VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVR 78
V+AL+GVSF + EGEI+ +GPNGAGK+TT++IL+TLL P GG A V G DVVKE EVR
Sbjct: 25 VEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDPDGGEARVAGFDVVKERWEVR 84
Query: 79 KLIS-YLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGE--RLNDKV 135
K I L E G Y +LTG E L + ++Y + + +K ++L GL + +
Sbjct: 85 KRIGVMLSVERGFYWKLTGRENLYYFGRIYGIPQGELKSRIKEVLDLVGLTDLGGADKPF 144
Query: 136 STYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSH 195
S GM RL LAR L+ P++ ILDEPT GLD +A IR I+ + EG T I++H
Sbjct: 145 EEMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASARTIRGVIRSLASEGRTIFITTH 204
Query: 196 NMLEVEYLCDRVALIHKGRILEVGTPRELKER-YNAENLE 234
NM+E E + DRV +I GRI GTP ELK R +++ NLE
Sbjct: 205 NMVEAEMISDRVGIIIGGRIAMEGTPDELKRRVFSSINLE 244
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 175 bits (439), Expect = 4e-43
Identities = 96/224 (42%), Positives = 139/224 (61%), Gaps = 1/224 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
V A+ V NL K YG +A+RG+SF++ GEIF +GPNGAGK+TT+ +L TLL PT GRA
Sbjct: 4 VEAIIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRA 63
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
V GHDVVKE+ EVRK I + ++ + LT E + ++Y ++ +K ++ ++
Sbjct: 64 IVAGHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIEELLK 123
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L E + +V +S GM RRL +ARAL+ +P++ LDEPT GLD I IK
Sbjct: 124 FVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTM 183
Query: 184 SKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
+E +T +++H M E E L DR+A+I G+I+ GT ELK+
Sbjct: 184 KEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKK 227
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 173 bits (435), Expect = 1e-42
Identities = 86/220 (39%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K Y + ++G++ IE+GE+ GL+GPNGAGKSTT+ ++++L+ PT G +
Sbjct: 593 IEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLIK 652
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + K++ +R ++ +P+E Y LT E L F K+Y + + ++ ++L G
Sbjct: 653 GGSIHKQSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLVG 712
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L ER ND+V T+S GM RRL +A AL+ +P+L I+DEPT G+D + I T+K ++E
Sbjct: 713 LEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQE 772
Query: 187 -GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+T + +SH M EVEYLCDR+ ++ +G ++ GT E+K
Sbjct: 773 REMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVK 812
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 173 bits (433), Expect = 2e-42
Identities = 86/220 (39%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K Y + ++G++ IE+GE+ GL+GPNGAGKSTT+ ++++L+ PT G +
Sbjct: 2 IEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLIK 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + K + +R ++ +P+E Y LT E L F K+Y + + ++ ++L G
Sbjct: 62 GGSIHKRSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLVG 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L ER ND+V T+S GM RRL +A AL+ +P+L I+DEPT G+D + I T+K ++E
Sbjct: 122 LEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQE 181
Query: 187 -GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+T + +SH M EVEYLCDR+ ++ +G ++ GT E+K
Sbjct: 182 REMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVK 221
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 171 bits (429), Expect = 7e-42
Identities = 98/211 (46%), Positives = 131/211 (61%), Gaps = 5/211 (2%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
++ V+++ K YG+ KAL +SF+IE+GEI G +GPNGAGKST +KIL T L G A V
Sbjct: 2 SIEVNSISKSYGEQKALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTTYLLADSGSALV 61
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
GHDV+ A V++ I YLPE Y L EYL F A +Y + E++ I+L+
Sbjct: 62 NGHDVMTNAKAVQQSIGYLPEHNPLYLDLYVREYLAFNADVYKVPKSRIEEV----IQLT 117
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL + K+S SKG +R+ LA AL+ P + ILDEPT+GLD EIR IK K
Sbjct: 118 GLTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQLMEIRNVIKNIGK 177
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRIL 216
+ FL S+H M EVE +CDRV +I KG+I+
Sbjct: 178 DKTIFL-STHIMQEVEAICDRVIIIDKGQIV 207
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 170 bits (427), Expect = 1e-41
Identities = 88/218 (40%), Positives = 133/218 (60%), Gaps = 4/218 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V NL K + +AL G+S +E GEIFG +GPNGAGK+TT+ L+ PT G +
Sbjct: 4 IEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSVRIA 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G DV ++ EV+++ YLPE G Y LT + L + ++ YA +++L L G
Sbjct: 64 GMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNVDELL----ALVG 119
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + + KV +S+GM +RL LA+AL+ P++ LDEPT+GLD + R+ I+E +++
Sbjct: 120 LQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIRELNQK 179
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
G TF SSH + EV +C V +I++GRI++VG EL
Sbjct: 180 GKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISEL 217
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 169 bits (424), Expect = 3e-41
Identities = 87/228 (38%), Positives = 141/228 (61%), Gaps = 1/228 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ +++K Y + A++GV+ ++ EG I+G++GPNGAGK+T + +L T+L PTGGR V
Sbjct: 5 IETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGTVN 64
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+D+V++A +VR+ I + + LTG E+LE A LY ++ ++ +EL
Sbjct: 65 GYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLELIA 124
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK- 185
LG++ ++ V TYS GM RRL + R L+ P++ LDEPT GLD I R I++ ++
Sbjct: 125 LGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRYIEKLNRE 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
E VT L+++H M E + LCD VA++ G I++ +P LK A+ +
Sbjct: 185 EDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLKRELGADTI 232
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 168 bits (422), Expect = 4e-41
Identities = 82/233 (35%), Positives = 144/233 (61%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V NL K +G + L+G++F + +GEI+GL+GPNG+GKSTT++IL+ ++ G+ V
Sbjct: 2 IIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMVA 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G DV ++ +V++++ Y+PE Y+ LT E+ F+ + E+ +K ++ G
Sbjct: 62 GVDVSRDPMKVKEIVGYVPETPALYESLTPAEFFSFIGGVRRIPQDILEERVKRLVDAFG 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+G+ +N + T S G +++ L AL+ P++ ILDE +GLD +A R + EF +E
Sbjct: 122 IGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIFRELLFEFKEE 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
G + + S+H + E +CDR+ +I++GRI+ GT EL+E E LE++F++
Sbjct: 182 GKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKLEDIFLK 234
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 168 bits (421), Expect = 6e-41
Identities = 88/243 (36%), Positives = 143/243 (58%), Gaps = 9/243 (3%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
NL K + A++ V+ + GE GL+GPNGAGKSTT+ +++TL+ PT G ++ G ++
Sbjct: 6 NLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKLNGINI 65
Query: 71 VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
+ ++RK++ +P+E Y+ L+ E L+F Y + E ++ +E+ GL +R
Sbjct: 66 ISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIVGLKDR 125
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK-EGVT 189
D V T+S GM RR+ +A AL+ +PK+ ILDEPT G+D + I T++ ++ EG T
Sbjct: 126 QKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNENEGTT 185
Query: 190 FLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAEN--------LEEVFMEAV 241
L +SH M EVE LCDR+ ++ G I+ GT EL + E+ ++E F++ V
Sbjct: 186 VLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLSILSTEDTIKVELSKIDETFVQNV 245
Query: 242 KNV 244
K +
Sbjct: 246 KMI 248
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 168 bits (420), Expect = 8e-41
Identities = 93/224 (41%), Positives = 139/224 (61%), Gaps = 5/224 (2%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ V NL K YG A++G+SF++++GEIF +GPNGAGK+TT+ +L TLL PT G+A V
Sbjct: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
GHDVVKE EVRK I + ++ + LT E + +Y R+ ++ ++ ++
Sbjct: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIM---NAFEIRRTIKE 182
L + V +S GM RRL +ARAL+ +P++ LDEPT GLD + +E RT+KE
Sbjct: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
+ +T +++H M E E L DR+A+I G+I+ GT ELK+
Sbjct: 183 --EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 167 bits (419), Expect = 1e-40
Identities = 90/221 (40%), Positives = 140/221 (62%), Gaps = 2/221 (0%)
Query: 7 VAVSNLEKDY-GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
+ NL K Y G +KA+ G++ +IEE EI+GL+G NGAGK+TT+K+L T + PT G A +
Sbjct: 9 IKTENLTKIYPGGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDPTSGNAII 68
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+D+ K+ ++R++I +P++ L G+E L +A Y ++AE+ +K +E+
Sbjct: 69 GGYDLRKDKEKIRRIIGVVPQDLTTDADLKGVENLRMIASFYNIPKQEAEQRIKDLLEIV 128
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + N VS YS GM +RL L L+ PK+ LDEPT GLD+ ++ + I++ K
Sbjct: 129 DLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRSKMWKYIRDIQK 188
Query: 186 E-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
E GVT +++SH + EV+ L DR+++I G+IL GTP LK
Sbjct: 189 ELGVTIILTSHYLEEVDQLADRISIIDHGKILITGTPDSLK 229
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 167 bits (419), Expect = 1e-40
Identities = 84/233 (36%), Positives = 143/233 (61%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V NL K +G + L+G+SF +++GEI+GL+GPNG+GKSTT++IL+ ++ G+ V
Sbjct: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G +V K+ +V++++ Y+PE Y+ LT E+ F+ + E+ ++ +E
Sbjct: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ + +N + T S G +++ L +L+ PK+ ILDE +GLD +A R + EF +E
Sbjct: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
G + + S+H + E +CDRV +I++GRI+ GT ELKE E LE+VF++
Sbjct: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK 234
>pir||B75459 sodium extrusion protein NatA - Deinococcus radiodurans (strain
R1) >gi|6458650|gb|AAF10504.1|AE001945_8 (AE001945)
sodium extrusion protein NatA [Deinococcus radiodurans]
Length = 244
Score = 166 bits (415), Expect = 3e-40
Identities = 95/238 (39%), Positives = 135/238 (55%), Gaps = 8/238 (3%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
+ +L K YG +ALR V+F +GE+FGL+GPNGAGK+T L+ILATLL PT G V G
Sbjct: 4 IQHLSKSYGSFQALRDVTFSARDGEVFGLLGPNGAGKTTLLRILATLLSPTSGSVTVAGL 63
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
D ++A VR+ I + G RLTG E L A LY + E + + LG
Sbjct: 64 DTQRDAEAVRRQIGVVNGGMGLPARLTGREVLRSFAALYDMGRAQTEARIAELDDRLELG 123
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE-- 186
L+ + YS GM +++++ARA++ P + +LDE SGLDI RRT+ +F +
Sbjct: 124 RTLDTRAGEYSTGMKQKVIIARAVIQDPAVLVLDEAASGLDIF----ARRTLLDFVAQTR 179
Query: 187 --GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
G L S+H M E E +CDRVA++H+G ++ + T + ER NLE F +K
Sbjct: 180 APGRLTLYSTHVMSEAEEVCDRVAILHQGELVALDTIPAILERTGERNLERAFFTLLK 237
>pir||B72582 probable nodulation ATP-binding protein APE1934 - Aeropyrum pernix
(strain K1) >gi|5105630|dbj|BAA80943.1| (AP000062) 276aa
long hypothetical nodulation ATP-binding protein
[Aeropyrum pernix]
Length = 276
Score = 164 bits (412), Expect = 7e-40
Identities = 95/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%)
Query: 22 LRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASE-VRKL 80
LRGVS ++ GEI L G NGAGK+T+L++L LL G A V G D E V+
Sbjct: 51 LRGVSLSVKFGEIHVLAGLNGAGKTTSLRVLVGLLSRDSGEARVLGVDPWGGGFERVKGE 110
Query: 81 ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG-ERLNDKVSTYS 139
+ YLPE+A Y+RLTG+E + F A+LY+ R E++++ + SGL E L + YS
Sbjct: 111 VGYLPEDASVYERLTGMENILFYARLYS-GWRDVEELVENAVFYSGLSREDLARRAGGYS 169
Query: 140 KGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLE 199
KGM RRLLL LM KP+L +LDEPTSG+D + + I++ ++ S+EG L+++H++
Sbjct: 170 KGMKRRLLLGITLMSKPRLVVLDEPTSGVDPIASNRIKKILRGLSREGRAILVTTHDLAL 229
Query: 200 VEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
E + DRV +IH G + G P L E Y E LE+ F+ V
Sbjct: 230 AEEIADRVTIIHGGSTVASGPPYRLVEEYCGETLEDAFVNIV 271
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 164 bits (411), Expect = 9e-40
Identities = 91/235 (38%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V + K YG AL VSF++EEGE+ G++GPNGAGKST +KIL + +P+ G ++F
Sbjct: 2 INVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKIF 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G D+V+ + E+ + I Y+PE+ Y L+ EYL+F++++ K +K +K + I +
Sbjct: 62 GKDIVEHSKEILQQIGYVPEKLALYPELSVKEYLKFISEI--KGVKKLKKEIDRVISIFK 119
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E + +S SKG +R+ +A AL+ PKL ILDEPT+GLD E + ++E +KE
Sbjct: 120 LKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLRELAKE 179
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
T L SSH + EVE +C R+ +++ G I+ T KE L+E+ +E +
Sbjct: 180 S-TILFSSHILSEVESICKRIIIVNNGVIVADDT----KENIIKNKLKEIEIELI 229
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 163 bits (408), Expect = 2e-39
Identities = 85/234 (36%), Positives = 137/234 (58%), Gaps = 1/234 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + L K + + +SF+I+ GEI GL+GPNGAGKSTTLK+L+ L P+ G +F
Sbjct: 2 IDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRIF 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G D+ +A + +KLI YLPE A +Y +T +L F+A + R+ + + ++
Sbjct: 62 GFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCME 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + + T SKG RR+ LA+A++ P+L +LDEPT GLD ++R+ +K S+
Sbjct: 122 LRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKNLSES 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA 240
+ +IS+H + EV ++C R +I+ GR+L TP EL+ R + + +EA
Sbjct: 182 KIV-VISTHILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIEA 234
>sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER)
>gi|7445612|pir||A69666 Na+ ABC transporter (extrusion)
(ATP-binding protein) natA - Bacillus subtilis
>gi|973330|gb|AAB53022.1| (U30873) NatA [Bacillus
subtilis] >gi|2415726|dbj|BAA22236.1| (AB000617) NatA
[Bacillus subtilis] >gi|2632561|emb|CAB12069.1| (Z99105)
Na+ ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 246
Score = 162 bits (407), Expect = 3e-39
Identities = 91/238 (38%), Positives = 144/238 (60%), Gaps = 2/238 (0%)
Query: 3 LVTAVAVSNLEKDYGKV-KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
++T S +D KV KA+R VS IE+GE+ G++G NGAGK+T L+++A+LL P+ G
Sbjct: 1 MITLTDCSRRFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQG 60
Query: 62 RAEVFGHDVVKEASEVRKLISYL-PEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
V G D VK+ +EV++ I L E G Y R+T E L++ +LY + + + ++
Sbjct: 61 VITVDGFDTVKQPAEVKQRIGVLFGGETGLYDRMTAKENLQYFGRLYGLNRHEIKARIED 120
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
+ G+ + +N +V +SKGM +++ +ARAL+ P + + DEPT+GLDI ++ R I
Sbjct: 121 LSKRFGMRDYMNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREFI 180
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
++ +E T L SSH M EV+ LCD V +IH G ++ G L E +E+L +FM
Sbjct: 181 QQLKREQKTILFSSHIMEEVQALCDSVIMIHSGEVIYRGALESLYESERSEDLNYIFM 238
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 162 bits (406), Expect = 3e-39
Identities = 84/222 (37%), Positives = 133/222 (59%), Gaps = 3/222 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
++V LEK YG V A+ GVSF + GE+FGL+GPNGAGK++TLK+L L+ P+ G V
Sbjct: 2 ISVQRLEKRYGGVTAVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAGDITVN 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G D A +R+ + +LPEE+ Y +T YL F A LY D A + ++ ++
Sbjct: 62 GFDAGDTA--MRRTLGFLPEESPLYDEMTPRSYLRFFADLYDVDRATANERIEAALDRLD 119
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L R + V +SKGM R++ +AR+L+ P + + DEP SGLD + + +E + +
Sbjct: 120 LDAR-DRPVGDFSKGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNTVIEFTRELAAD 178
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G T + S+H++ VE +CDRVA++ G+ GT ++++ +
Sbjct: 179 GKTIVFSAHDLHHVESVCDRVAIMRDGQFAATGTLADIRDEH 220
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 162 bits (405), Expect = 4e-39
Identities = 87/238 (36%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V V +L K+Y + LRG+SF + +GEIF L+GPNGAGK+TT+KIL+ +L PT G +V
Sbjct: 6 VEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKVI 65
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+ V E ++R+ I +P++ + LT E +E+ KLY + +++ I L
Sbjct: 66 GYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNGKETQVDEL----ISLLD 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + N K+ S G VRR+ +A A ++ LDEPT GLD IK +
Sbjct: 122 LEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMKNK 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKNV 244
GVT +++H + E + L DRVA+++ G++++V T E+ + A NLE+ ++E +K++
Sbjct: 182 GVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLELIKSL 239
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 162 bits (405), Expect = 4e-39
Identities = 87/238 (36%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V V +L K+Y + LRG+SF + +GEIF L+GPNGAGK+TT+KIL+ +L PT G +V
Sbjct: 6 VEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKVI 65
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+ V E ++R+ I +P++ + LT E +E+ KLY + +++ I L
Sbjct: 66 GYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNGKETQVDEL----ISLLD 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + N K+ S G VRR+ +A A ++ LDEPT GLD IK +
Sbjct: 122 LEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMKNK 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKNV 244
GVT +++H + E + L DRVA+++ G++++V T E+ + A NLE+ ++E +K++
Sbjct: 182 GVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLELIKSL 239
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 161 bits (404), Expect = 6e-39
Identities = 88/220 (40%), Positives = 129/220 (58%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ S L K Y +A+ G+ + G ++G++GPNGAGKSTT+++LATLL P GG A V
Sbjct: 8 AIETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTARV 67
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FGHDV E VR+ IS + A + LTG E L M +L +A + I+
Sbjct: 68 FGHDVTSEPDTVRRRISVTGQYASVDEGLTGTENLVMMGRLQGYSWARARERAAELIDGF 127
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GLG+ + + TYS GM RRL +A +++V P L LDEPT+GLD + ++ ++
Sbjct: 128 GLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALVD 187
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
G T L+++ + E + L DR+A+I GR++ GT ELK
Sbjct: 188 AGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELK 227
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 160 bits (400), Expect = 2e-38
Identities = 93/234 (39%), Positives = 134/234 (56%), Gaps = 6/234 (2%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
TA++V L+K + L+GV F ++ GEIF L+G NGAGK+TT+ IL+TLL P G A
Sbjct: 4 TAISVKRLKKSFKNKDVLKGVDFAVQRGEIFALLGSNGAGKTTTVNILSTLLKPDEGEAS 63
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKL--YAKDSRKAEKMLKLGI 122
+ G DV ++ VR+ IS + A LTG E L +AKL S+ A+ +L
Sbjct: 64 ICGFDVQRQPDHVRQSISLTGQFAALDGMLTGRENLMIIAKLRGVPNPSQVADHLL---- 119
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
L + N + YS GM RRL +A +L+ KP + LDEPT+GLD E+ +KE
Sbjct: 120 ARFSLTDAANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPTTGLDPEGRIEVWDAVKE 179
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEV 236
+ G T L+++ + E E L DR+A++H G+I+ GT ELKE + +E V
Sbjct: 180 LAGGGTTILLTTQYLEEAEQLADRIAILHDGKIITTGTLAELKEMFPPAKVEYV 233
>pir||T36741 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531429|emb|CAB50934.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 332
Score = 160 bits (400), Expect = 2e-38
Identities = 89/227 (39%), Positives = 136/227 (59%), Gaps = 6/227 (2%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
M AV LEK +G V+ALRG+ + EG + GL+GPNGAGK+T +++L TLL P
Sbjct: 1 MTTTYAVLSEGLEKRFGTVRALRGLDLAVPEGTVCGLLGPNGAGKTTAVRLLTTLLRPDA 60
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLY-AKD-SRKAEKML 118
G A V GHD+V+EA+ VR+LI + A LTG + L A+L+ +D + +A+++L
Sbjct: 61 GSARVAGHDLVREAAAVRRLIGVTGQYASVDGDLTGRQNLRLFARLHRVRDAAARADELL 120
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
+ GL E + T S G+ RRL LA +L+ +P++ LDEPT+GLD +
Sbjct: 121 ----DRFGLAEAADRPAVTLSGGLRRRLDLAASLVRRPEVLFLDEPTTGLDPAGRNRVWE 176
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
T++ +G T L+++ + E + L D +AL+ +GR+ G+P ELK
Sbjct: 177 TVRALKADGTTVLLTTQYLEEADRLADDIALVDRGRVAHTGSPAELK 223
>pir||T36505 probable ABC-type transport system ATP-binding component -
Streptomyces coelicolor >gi|5457259|emb|CAB46947.1|
(AL096822) putative ABC-transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 342
Score = 159 bits (398), Expect = 3e-38
Identities = 86/225 (38%), Positives = 130/225 (57%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + L K +G+ +A+ GV + G ++G++GPNGAGK+TT+K+LATLL P GG A V
Sbjct: 9 AIETAGLVKTFGETRAVDGVDLAVPAGTVYGVLGPNGAGKTTTVKMLATLLRPDGGHARV 68
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FGHDVV EA EVR +S + A + LTG E L + +L A + +
Sbjct: 69 FGHDVVHEADEVRGRVSLTGQYASVDEDLTGTENLVLLGRLLGHGKAAARERGDQLLAAF 128
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL + +V YS GM RR+ +A +++ P L LDEPT+GLD + ++ ++
Sbjct: 129 GLTDAAAKQVKHYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVA 188
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
+G T L+++ + E + L R+A+I KGR++ GT ELK A
Sbjct: 189 QGTTVLLTTQYLDEADQLASRIAVIDKGRVIAEGTKGELKASVGA 233
>dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kasugaensis]
Length = 329
Score = 159 bits (398), Expect = 3e-38
Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 1/200 (0%)
Query: 18 KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEV 77
+V AL V+ + EGE G++GPNGAGK+T ++IL+T+L PT GRA V GHDV EA +V
Sbjct: 32 RVVALDSVNLSVPEGETHGVLGPNGAGKTTLVRILSTMLLPTSGRALVAGHDVTTEADQV 91
Query: 78 RKLISYL-PEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVS 136
R+ I + + G Y R+T + L F A +Y D+ ++ + +E GL +R ++ V
Sbjct: 92 RRRIGIVFGGDNGLYTRITARQNLVFWATMYRVDASVVKRRSQELLERVGLADRADEPVE 151
Query: 137 TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHN 196
+S+GM +RL LAR L+ P + LDEPT G+D + + R + E EG T LI++H+
Sbjct: 152 GFSRGMRQRLHLARGLIGDPAVLFLDEPTMGMDPLATRDFRDLVHELKAEGRTILITTHD 211
Query: 197 MLEVEYLCDRVALIHKGRIL 216
M E E LCDRV+L+ G IL
Sbjct: 212 MSEAEALCDRVSLVDHGSIL 231
>gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporter ATP-binding
protein; Trp6 [Halobacterium sp. NRC-1]
Length = 263
Score = 159 bits (398), Expect = 3e-38
Identities = 90/237 (37%), Positives = 132/237 (54%), Gaps = 4/237 (1%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ +L K+YG A+ G + IE G ++G +GPNGAGK+TT+++L L PT G V
Sbjct: 6 AITTDDLTKEYGDTTAVSGFTLAIEAGHVYGFLGPNGAGKTTTIRMLTALTEPTSGAGHV 65
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
GH + + + I YLPE Y LT E LE+ L D + E ++ ++
Sbjct: 66 AGHPITNRQAIIPH-IGYLPELPPIYDELTAREQLEYHGGLRDMDPVEIEDRIEELLDRF 124
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L +D++STYSKGM ++ L +ALM +P + ILDEPTSGLD A +R TI E +
Sbjct: 125 DLTGDADDRISTYSKGMKQKTGLVQALMHEPDVVILDEPTSGLDPRAARTVRDTITELAA 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA---ENLEEVFME 239
T +S+H + V L V +++ G ++ G P ELK+R A LE+VF+E
Sbjct: 185 GDRTVFLSTHILPVVAELATEVGILYDGELVAEGAPEELKDRMEAGGESTLEDVFLE 241
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 159 bits (397), Expect = 4e-38
Identities = 90/219 (41%), Positives = 127/219 (57%), Gaps = 17/219 (7%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
V NL K YG +A++G+SF + GE+ GLIG NGAGKSTTLKILA L+ P GG FG
Sbjct: 4 VRNLFKRYGSFEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGLIRPDGGEVRYFGK 63
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
D E++++I YLPE Y +T EYL A +Y + ++ GL
Sbjct: 64 DF---DEEMKRIIGYLPEIDALYDNMTVSEYLNLFADIY-----------DVRADIDGLL 109
Query: 129 ERLN--DK-VSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
ERLN DK +S SKGM R++ +AR L+ P++ + DEPT GLD + I ++E ++
Sbjct: 110 ERLNLPDKYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAELLRELAE 169
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
G + S+HNM VE + D+V ++ G+ L G+ EL
Sbjct: 170 RGKIIVFSAHNMYYVERIADKVVVMKGGKALYFGSLEEL 208
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 158 bits (396), Expect = 5e-38
Identities = 90/221 (40%), Positives = 134/221 (59%), Gaps = 1/221 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ V NL K +G +A+RGVSF+++ GEIF +GPNGAGK+TT+ IL TLL PT G+A V
Sbjct: 79 AIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKAFV 138
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G DVV+EA EVR+ I + ++ + LT E + +Y ++ ++ ++ ++
Sbjct: 139 AGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLKFV 198
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L E + V +S GM RRL +AR+L+ P++ LDEPT GLD + I+ +
Sbjct: 199 ELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYIEAMKE 258
Query: 186 E-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
E +T +++H M E E L DRVA+I GRI+ G+ ELK
Sbjct: 259 EQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELK 299
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 158 bits (395), Expect = 6e-38
Identities = 88/221 (39%), Positives = 129/221 (57%), Gaps = 1/221 (0%)
Query: 6 AVAVSNLEKDYG-KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
A+ V L K +G AL GV F + G + GL+G NGAGK+TT+ IL+TL+ PT GRA
Sbjct: 5 AIEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRAS 64
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V GHDVV+ +EVR I + G LTG E L ++L + R+A+ +E
Sbjct: 65 VAGHDVVRRPAEVRASIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQ 124
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + + ++STYS GM RR+ LA AL+V PK+ LDEPT+GLD + ++ +
Sbjct: 125 FNLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLR 184
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+G+T L+++ + E + L D + +I GR++ GT ELK
Sbjct: 185 VQGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELK 225
>pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9107498|gb|AAF85128.1|AE004043_12 (AE004043) sodium
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 248
Score = 157 bits (392), Expect = 1e-37
Identities = 85/239 (35%), Positives = 136/239 (56%), Gaps = 4/239 (1%)
Query: 7 VAVSNLEKDY----GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ +L K + G V A++ +SF +G I GL+GPNGAGK+TTL++L TLL P G
Sbjct: 2 ITAEHLHKSFKTKKGLVNAVKDLSFHAADGRITGLLGPNGAGKTTTLRMLYTLLIPDQGC 61
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
+ G D V + VR+ + LP+ G YKRLT E + + +L+ L +
Sbjct: 62 ISIDGVDAVSDPMTVRRGLGVLPDACGIYKRLTARENIAYFGELHGLSRIDIAARLSILS 121
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
+ + + L+ + + +S G ++ +ARAL+ P+ ILDEPT+GLD+M ++R +++
Sbjct: 122 KALDMDDILDRQAAGFSHGQRTKIAIARALVHDPRNIILDEPTNGLDVMTTRKLRDFLRQ 181
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
EG + SSH M EV LCD + +I G ++ G+ EL+ R +NLE+ F++AV
Sbjct: 182 LRAEGRCIIFSSHIMQEVAALCDHIIVIANGTVVVAGSGDELRARTGKDNLEDAFIDAV 240
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 157 bits (392), Expect = 1e-37
Identities = 87/228 (38%), Positives = 129/228 (56%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ L K YG AL G + EG + L+GPNGAGK+T ++IL+TLL P GGRA V
Sbjct: 8 ALVAEGLRKTYGSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILSTLLKPDGGRALV 67
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G DV +EA+EVR+ I + + LTG E LE +LY R+A++ + +E
Sbjct: 68 AGLDVTREAAEVRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQF 127
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L E + ++ YS GM RRL LA PK+ LDEPT+GLD N E+ + ++ +
Sbjct: 128 DLTEAADKRLKHYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKMVRSMVE 187
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
+G T L+++ + E + L D++++I GR + GTP LK + +
Sbjct: 188 QGTTVLLTTQYLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDRI 235
>emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei]
Length = 363
Score = 156 bits (391), Expect = 2e-37
Identities = 83/220 (37%), Positives = 130/220 (58%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + L K +G+ +A+ GV ++ G ++GL+GPNGAGK+TT+K+LATLL P GG A V
Sbjct: 6 AIETTGLVKVFGENRAVDGVDLRVPAGTVYGLLGPNGAGKTTTVKVLATLLRPDGGEARV 65
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FG DV+ +A VR +S + A + LTG E L +A+L A + ++
Sbjct: 66 FGRDVLADADAVRGRVSLTGQYASVDEDLTGTENLLLLARLLGHSKPAARERAAQLLDAF 125
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL E +V +YS GM RR+ +A +++ P L LDEPT+GLD + ++ ++
Sbjct: 126 GLSEAAGRQVKSYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVA 185
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+G T L+++ + E + L R+A+I GR++ GT ELK
Sbjct: 186 QGTTVLLTTQYLDEADQLASRIAVIDHGRVIAEGTKGELK 225
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 156 bits (391), Expect = 2e-37
Identities = 86/235 (36%), Positives = 130/235 (54%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ V K+YG AL G+ + G + G++GPNGAGK+T ++IL+TLL P GR EV
Sbjct: 7 AITVEGARKEYGSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILSTLLRPDAGRVEV 66
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
GHDVV EA VR I L + A + L G + LE +L+ +R A +
Sbjct: 67 AGHDVVAEAYAVRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVRF 126
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL + V YS GM RRL LA +L+ +P++ LDEPT+GLD E+ +++
Sbjct: 127 GLSDTGRKPVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDSVRSLVG 186
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA 240
G T L+++ + E + L DR++++ GR++ GT ELK + ++ V +A
Sbjct: 187 AGTTVLLTTQYLEEADQLADRISVVDAGRVVADGTADELKAATGGDRVDVVLRDA 241
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 156 bits (391), Expect = 2e-37
Identities = 78/239 (32%), Positives = 139/239 (57%), Gaps = 3/239 (1%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
L++ + L + +G A+ + + GEI+G +GPNGAGK+TT+K+L +L PT G
Sbjct: 8 LISLIVARGLTRKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGE 67
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
E+ G + E++K I +P+E Y LTG E+L+F+ ++Y + +K +
Sbjct: 68 VEILGMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAELC 127
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
E + + L +V S GM ++L+L M KPK+ LDEPT GLD +A ++ +++
Sbjct: 128 EAFKV-DYLGKRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSARILKLLLRK 186
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE--NLEEVFME 239
++ EG +++H + E +CDR+ +I+KGR++ GT EL++ + +LE++F++
Sbjct: 187 YADEGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKLAGQKEASLEDLFLQ 245
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 156 bits (390), Expect = 2e-37
Identities = 89/228 (39%), Positives = 136/228 (59%), Gaps = 2/228 (0%)
Query: 17 GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASE 76
G+V A+ VSF GE+ G++GPNGAGK+TTL+++AT+ P G V G D VK E
Sbjct: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
Query: 77 VRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVS 136
VRK I+Y+ +E L+ +Y+ + + R A+K + +EL GL + K
Sbjct: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
Query: 137 TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE-FSKEGVTFLISSH 195
S G+ RR+ LA AL L LDEPT+G+D + + IKE +GVT +++SH
Sbjct: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
Query: 196 NMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKN 243
++ EVEYL DRV ++++G+I+ G+P+ELK+R+ + + V E +KN
Sbjct: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEPIKN 244
>emb|CAB95908.1| (AL359988) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 263
Score = 155 bits (389), Expect = 3e-37
Identities = 91/237 (38%), Positives = 136/237 (56%), Gaps = 2/237 (0%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+AV V L K +G+ A+ GV ++ G+ GL+GPNGAGK+TTL ++ LL P G E
Sbjct: 10 SAVRVQGLWKRFGQQVAVGGVDLELPAGKFIGLVGPNGAGKTTTLSMVTGLLRPDQGTVE 69
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V GHDV ++ EV+ I LPE ++RL+G E L + +L + +K +++
Sbjct: 70 VVGHDVWRDPVEVKARIGVLPEGLRLFERLSGRELLGYTGRLRGLPGDEVDKRATQLLDV 129
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + V YS GM +++ LA AL+ P++ LDEP G+D ++A IR ++ ++
Sbjct: 130 LDLAGAQHKLVVDYSTGMRKKIGLAAALLHNPEVLFLDEPFEGVDPVSAQTIRGVLERYT 189
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
G T + SSH M VE LCD VA++ GRI GT E+ R A +L+E F+E V
Sbjct: 190 ASGATVVFSSHVMELVESLCDWVAVMAAGRIRATGTLAEV--RGGAASLQEAFLELV 244
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 155 bits (389), Expect = 3e-37
Identities = 93/218 (42%), Positives = 131/218 (59%), Gaps = 6/218 (2%)
Query: 12 LEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVV 71
L K +GK ++R ++ +++G+IFG +GPNGAGKSTT+K++ LLHPT G +VFG +
Sbjct: 12 LSKKFGKEYSVRNLTISVKKGDIFGFLGPNGAGKSTTMKMILGLLHPTEGEVKVFGKKLD 71
Query: 72 KEA-SEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
+ V K + L EE Y L+GLE L+ + KL EK+L + L ++
Sbjct: 72 NSVKNSVLKDVGCLIEEPSFYPNLSGLENLKLVQKLLNLPYHNIEKVL----NIVKLEDQ 127
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF-SKEGVT 189
N V YS GM +RL +A AL+ PKL ILDEPT+GLD EIR IK K G+T
Sbjct: 128 KNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPTGIREIRELIKSLPEKYGIT 187
Query: 190 FLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
LISSH + E+E + + VA+I KG +L G +L+E+
Sbjct: 188 VLISSHLLSEIEQIANTVAIIKKGELLYEGELSKLEEQ 225
>pir||G82707 ABC transporter ATP-binding protein XF1223 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106199|gb|AAF84033.1|AE003956_3 (AE003956) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 310
Score = 155 bits (389), Expect = 3e-37
Identities = 86/227 (37%), Positives = 137/227 (59%), Gaps = 1/227 (0%)
Query: 6 AVAVSNLEKDYGK-VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
A+ V NL K Y +AL+G+S I G+ F L+GPNGAGKST + I+++L++ + G E
Sbjct: 10 ALHVYNLHKTYSNGTQALKGISLDITPGDFFALLGPNGAGKSTLISIVSSLVNLSSGSVE 69
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
VFG D+V+E S +LI +P+E L+ L A Y KAE + ++ ++
Sbjct: 70 VFGIDLVRERSAAIRLIGLVPQEINFNLFEKPLDILINYAGFYGIPYAKAEALAEIELKR 129
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
+ L E+ T S GM RRL++ARA+M +P+L ILDEPT+G+D+ ++ R ++E +
Sbjct: 130 AHLWEKAQVMSRTLSGGMKRRLMIARAMMTQPRLLILDEPTAGVDVEIRRDMWRVLQEIN 189
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
G T ++++H + E E LC +A+I+ G+I+E G R L + + E
Sbjct: 190 ANGTTIMLTTHYLEEAESLCRNLAIINGGQIIEKGPMRTLLAKLDVE 236
>pir||H75288 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460124|gb|AAF11860.1|AE002063_3
(AE002063) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 327
Score = 155 bits (388), Expect = 4e-37
Identities = 86/218 (39%), Positives = 126/218 (57%), Gaps = 2/218 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K Y + G++ + GE+FG +GPNGAGKSTT+K+L L+ P+GG A V
Sbjct: 16 IETRELRKVYRDRAVVDGLTLTVGAGEVFGFLGPNGAGKSTTVKMLLGLVIPSGGEARVL 75
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
A VR + +LPE+ +T E+L F +L S + + +E G
Sbjct: 76 CGSPADPA--VRARLGFLPEQFRFQLWMTAEEFLNFHGQLAGMKSNELRTRVPQVLEEVG 133
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
LG R +++S YSKGM++R LA A++ +P+L LDEPTS LD + E+R I+ E
Sbjct: 134 LGGRGGEQLSGYSKGMLQRCGLAGAILARPQLVFLDEPTSALDPIGRVEVREIIERLKGE 193
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
GV ++SH + EVE +CDRVA + GR+L+ G+ REL
Sbjct: 194 GVAVFLNSHLLSEVEQVCDRVAFVKAGRVLQQGSMREL 231
>gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 155 bits (387), Expect = 6e-37
Identities = 87/221 (39%), Positives = 127/221 (57%), Gaps = 1/221 (0%)
Query: 6 AVAVSNLEKDYG-KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
A+ V L K +G AL GV F + G + GL+G NGAGK+TT+ IL+TL+ PT GR
Sbjct: 5 AIEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRGN 64
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V GHDVV +EVR I + G LTG E L ++L + R+A+ +E
Sbjct: 65 VAGHDVVARPAEVRANIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQ 124
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + + ++STYS GM RR+ LA AL+V PK+ LDEPT+GLD + ++ +
Sbjct: 125 FNLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLR 184
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+G+T L+++ + E + L D + +I GR++ GT ELK
Sbjct: 185 VQGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELK 225
>pir||C83188 probable ATP-binding component of ABC transporter PA3672 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949834|gb|AAG07060.1|AE004786_12 (AE004786)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 307
Score = 155 bits (387), Expect = 6e-37
Identities = 88/247 (35%), Positives = 135/247 (54%), Gaps = 10/247 (4%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ NL K +G A+ +SFQ+E GE+ G +GPNGAGKSTT+K+L L P G A +F
Sbjct: 2 IETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASIF 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G D+ + ++LI YLPE + Y +T +L+F+A++ + + + L
Sbjct: 62 GFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLLE 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E + T SKG RR+ LA+A++ +P+ +LDEPT GLD ++R I+ ++E
Sbjct: 122 LDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELIRGLAQE 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER---------YNAENLEEVF 237
+ +IS+H + EV LC R +I GR+L TP EL R Y+ E L+ V
Sbjct: 182 RIV-IISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSRYHQAVTLYSDEPLDAVA 240
Query: 238 MEAVKNV 244
+ + V
Sbjct: 241 LAVLPGV 247
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 153 bits (384), Expect = 1e-36
Identities = 86/231 (37%), Positives = 129/231 (55%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV LEK YG +AL G + EG + GL+GPNGAGK+T ++IL+TL+ GGRAEV
Sbjct: 6 AVRAEGLEKRYGDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILSTLIRLDGGRAEV 65
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G D+ ++A EVR I + A + LTG + LE +L+ R+A +E
Sbjct: 66 AGLDIARQAREVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQF 125
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + V YS GM RRL LA ++++ P + LDEPT+GLD + E+ +++E
Sbjct: 126 DLTDAADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWESVRELVA 185
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEV 236
G T L+++ + E + L R+ +I +GR + TP LK + +E V
Sbjct: 186 SGTTVLLTTQYLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDRIEVV 236
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 153 bits (383), Expect = 2e-36
Identities = 86/236 (36%), Positives = 133/236 (55%), Gaps = 5/236 (2%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ +S + K YG V AL ++ ++EGEI+G +GPNGAGKST + IL + PT G A +
Sbjct: 3 AIELSGVSKRYGDVTALTDLNITVDEGEIYGFLGPNGAGKSTAINILLDFVRPTTGSATI 62
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+D ++ +R+ I LPE Y RLT +++EF A DS+ A ++
Sbjct: 63 LGYDAQADSQAIRQRIGVLPEGFSVYDRLTARKHVEF-----AIDSKNATNDPDALLDRV 117
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
G+ E + K +S GM +RL LA AL+ P++ +LDEP+SGLD A E+R + E +
Sbjct: 118 GIPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDPNGAREMRSILTEEAN 177
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
G T SSH + +VE +CD ++ G ++ + L+E +A V ++AV
Sbjct: 178 RGTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALREATDATTTLTVTLDAV 233
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 153 bits (383), Expect = 2e-36
Identities = 89/231 (38%), Positives = 137/231 (58%), Gaps = 5/231 (2%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + ++L K YG K++ ++ +++G+I+G +G NGAGK+TT+++L L+ PT G+ E
Sbjct: 3 TIIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIE 62
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+FG + K E+ + I + E G Y LT E L AK+ + A + +E+
Sbjct: 63 IFGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNA---IDEVLEI 119
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL V +S GM +RL +ARAL+ P+L+ILDEPT+GLD + E+RR I +
Sbjct: 120 VGLQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIHSLA 179
Query: 185 KE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLE 234
KE +T ISSH + E+E L D V +IH+G++LE LK+R N + LE
Sbjct: 180 KERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKR-NRKYLE 229
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 153 bits (382), Expect = 2e-36
Identities = 85/232 (36%), Positives = 146/232 (62%), Gaps = 11/232 (4%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + + N+ K+ + +SF I EGE+FG +GPNGAGK+TT++++ L+ + G
Sbjct: 3 TVLELKNVTKNIRGRTIIDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDVL 62
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G + KE ++ K I + E YK L+G + L+ A++ ++ EK+ ++ +EL
Sbjct: 63 ICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARMVKGVTK--EKIDEV-VEL 119
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL +R++DKV TYS GM +RL LA+ L+ PK+ ILDEPT+GLD EIR +K+ +
Sbjct: 120 VGLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLT 179
Query: 185 KE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEE 235
+E G+ ++SSH + E+E +CDR+A++ KG+++++ ++ EN++E
Sbjct: 180 RERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKD-------ENIDE 224
>pir||T36523 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4753857|emb|CAB42020.1|
(AL049754) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 153 bits (382), Expect = 2e-36
Identities = 85/225 (37%), Positives = 132/225 (57%), Gaps = 9/225 (4%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ A++VS L K +G+ AL G+ ++E GE+ G +GPNGAGKSTT+++L LL G
Sbjct: 1 MTKAISVSGLHKSFGRTHALDGLDLEVETGEVHGFLGPNGAGKSTTIRVLLGLLRADAGA 60
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYA--KDSRKAEKMLKL 120
A+V G D +A E + I+Y+P + ++ L+G E ++ +L R+AE + +
Sbjct: 61 AQVLGRDPWADAVEAHRRIAYVPGDVTLWRNLSGGEVIDLYGRLRGGLDTRRRAELVERF 120
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
++ + G TYSKG +++ L A L ILDEPTSGLD + +R +
Sbjct: 121 ELDPTKKGR-------TYSKGNRQKVALVAAFASDVDLLILDEPTSGLDPLMEEVFQRCV 173
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+E + G T L+SSH + EVE LCDRV++I KGR +E G+ +L+
Sbjct: 174 EEERERGRTVLLSSHILSEVEELCDRVSIIRKGRTVESGSLADLR 218
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 153 bits (382), Expect = 2e-36
Identities = 81/211 (38%), Positives = 127/211 (59%), Gaps = 5/211 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V NL K++GK +A+ ++ QI +GEI+G +GPNGAGK+TT+++L L+ P+ G ++F
Sbjct: 13 VQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGTIKIF 72
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
D+VK+ ++ + L E Y LT E LE + K+ + +++L +
Sbjct: 73 QKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPKTRIDEVL----QTVR 128
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E N KV +S GM +RL +A AL+ P+L ILDEPT+GLD EIR IK KE
Sbjct: 129 LKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKRLPKE 188
Query: 187 -GVTFLISSHNMLEVEYLCDRVALIHKGRIL 216
G+T +ISSH + E++ + +V ++ KG ++
Sbjct: 189 YGMTIIISSHLLSEIDQMATQVGIVSKGTLI 219
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 152 bits (381), Expect = 3e-36
Identities = 89/231 (38%), Positives = 136/231 (58%), Gaps = 5/231 (2%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + ++L K YG K++ ++ +++G+I+G +G NGAGK+TT+++L L+ PT G+ E
Sbjct: 3 TIIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIE 62
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+FG + K E+ + I + E G Y LT E L AK+ + A + +E+
Sbjct: 63 IFGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNA---IDEVLEI 119
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL V +S GM +RL +ARAL+ P+L ILDEPT+GLD + E+RR I +
Sbjct: 120 VGLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLA 179
Query: 185 KE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLE 234
KE +T ISSH + E+E L D V +IH+G++LE LK+R N + LE
Sbjct: 180 KERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKR-NRKYLE 229
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 152 bits (381), Expect = 3e-36
Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 5/223 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K + +AL+ VSF I+ GE FG +GP+GAGK+TT+KIL + G +F
Sbjct: 5 IEVKHLRKTFDGKEALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQVRSFDGEVALF 64
Query: 67 GHDVVK-EASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V + + I L + +G Y+RLT + L KLY+ R+ +L
Sbjct: 65 GKPVHRLKRKTFMSQIGVLTDNSGLYERLTVQDNLSMYCKLYSVPERRIHDVLAE----V 120
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL + VS SKGM +R++LARA++ KP L LDEPTS LD ++ I +++ ++
Sbjct: 121 GLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASSHMIHDSLRRLNR 180
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
EG T +++H+MLE E +CDRVA + +G+I + TP +L+ Y
Sbjct: 181 EGTTIFLTTHDMLEAEKICDRVAFLDQGKIRVMDTPEQLRLTY 223
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 152 bits (380), Expect = 4e-36
Identities = 87/236 (36%), Positives = 133/236 (55%), Gaps = 4/236 (1%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ L K YG A+ + + G ++G +GPNGAGK+TT+++L TL+ PT G A V
Sbjct: 5 AIEARALTKRYGDTTAIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLTTLVEPTSGTATV 64
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G +V AS V I YLPEE + LT E L ++A L +AE+ + +E
Sbjct: 65 AGVEVTDRASVVPN-IGYLPEEPPLHAELTAREQLRYIAGLRDIPDPRAEQRITDLLERF 123
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
LG+ + ++STYSKGM ++ + +A++ P + LDEPTSGLD A +R TI + +
Sbjct: 124 SLGDDADRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRAARTVRDTIADLTA 183
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA---ENLEEVFM 238
T +S+H + V+ L D V +++ G ++ G P LK+R A LE+VF+
Sbjct: 184 GDATVFLSTHILPVVDDLADTVGVLYDGSLVTEGPPDALKQRAEAGDERTLEDVFL 239
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 152 bits (379), Expect = 5e-36
Identities = 82/225 (36%), Positives = 136/225 (60%), Gaps = 9/225 (4%)
Query: 7 VAVSNLEKDYG-------KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPT 59
V++ L K Y +VKAL+G+ +I G+++GL+GPNGAGKSTT+KIL L+ +
Sbjct: 13 VSIRGLSKTYKVGFFLNKQVKALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGLVRAS 72
Query: 60 GGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLK 119
G+A +FG + VR+ + +LPE Y+ LTG E++ +++ + ++ ++
Sbjct: 73 EGQALLFGEP--PDRPHVRRQVGFLPENPSLYEYLTGREFVTLAGRIFGLSGHELDQRVE 130
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+ G+G + ++ YSKGMV+R LA+AL+ P+L +LDEPTSGLD + ++R
Sbjct: 131 RVLGDVGMGRASDLQIRRYSKGMVQRTALAQALISGPRLLVLDEPTSGLDPLGRRQMRDL 190
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
I +G T L +H + +VE LCDRV ++ GR ++ G+ ++L
Sbjct: 191 ILAERAKGTTILFCTHIISDVESLCDRVVVLVGGRRVQEGSVQDL 235
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 151 bits (378), Expect = 6e-36
Identities = 85/222 (38%), Positives = 130/222 (58%), Gaps = 4/222 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ ++NL K YG A+ +S +E G+I+G +G NGAGK+TT+++L L+ PT G ++F
Sbjct: 8 IEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGNIKIF 67
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
+ +E+ K I + E G Y LT E L AK+ + E ++ +E+ G
Sbjct: 68 EKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKIL---GIQKENAIEEVLEIVG 124
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK- 185
L YS GM +RL +ARAL+ P+L ILDEPT+GLD + EIR+ IK+ ++
Sbjct: 125 LASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLAQS 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+T LISSH + E+E L D+V +IH G +LE +LK++
Sbjct: 185 RNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKKK 226
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 151 bits (377), Expect = 8e-36
Identities = 85/245 (34%), Positives = 149/245 (60%), Gaps = 13/245 (5%)
Query: 5 TAVAVSNLEKDYGK-VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+A+++ L K YG +AL+G+ + EG+ F L+GPNGAGKSTT+ IL+TL++ T G
Sbjct: 3 SALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSV 62
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
VFGHD+ K+ + +++ + +P+E + + + A Y ++ A++ + +
Sbjct: 63 SVFGHDLDKDPAGLKRCLGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLT 122
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT---- 179
GL ++ N+ S GM RRL++ARAL+ +P+L ILDEPT+G+DI E+RR+
Sbjct: 123 QLGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDI----ELRRSMWSF 178
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
+ E ++EG++ ++++H + E E LC +A+I G I++ + R+L ++ E F+
Sbjct: 179 LTELNQEGISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHS----ETFLL 234
Query: 240 AVKNV 244
+KNV
Sbjct: 235 DLKNV 239
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 150 bits (376), Expect = 1e-35
Identities = 83/235 (35%), Positives = 130/235 (55%), Gaps = 1/235 (0%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + L K +G A V+F ++ GEIFGL+GPNGAGKSTT K++ LL PT G+A
Sbjct: 333 TVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQAL 392
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G D+ + + + R+ + Y+ ++ Y LT + L F + +Y R + + E
Sbjct: 393 VLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEA 452
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL + G +RL LA +LM +P + LDEPTSG+D + E I
Sbjct: 453 FGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV 512
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
++GVT ++++H M E EY CDR+ L+++G+++ GTP +LK + + + ME
Sbjct: 513 EKGVTVMVTTHFMDEAEY-CDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTME 566
Score = 114 bits (283), Expect = 9e-25
Identities = 70/222 (31%), Positives = 120/222 (53%), Gaps = 3/222 (1%)
Query: 7 VAVSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ ++ LEK + + A+ + I G + GL+GP+GAGK+T +++LA LL P G A
Sbjct: 11 ITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSAT 70
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G D +K + ++ Y+P++ G Y+ LT +E L A L + ++ +E
Sbjct: 71 VIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEF 130
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
+ LG S GM ++L LA L+ +PK+ +LDEP G+D ++ E+ + + E +
Sbjct: 131 TSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA 190
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
EG+ L S+ + E E C V L+++G +L G P+ L +
Sbjct: 191 GEGMLILWSTSYLDEAEQ-CRDVLLMNEGELLYQGEPKALTQ 231
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 150 bits (376), Expect = 1e-35
Identities = 83/235 (35%), Positives = 130/235 (55%), Gaps = 1/235 (0%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + L K +G A V+F ++ GEIFGL+GPNGAGKSTT K++ LL PT G+A
Sbjct: 328 TVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQAL 387
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G D+ + + + R+ + Y+ ++ Y LT + L F + +Y R + + E
Sbjct: 388 VLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEA 447
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL + G +RL LA +LM +P + LDEPTSG+D + E I
Sbjct: 448 FGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV 507
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
++GVT ++++H M E EY CDR+ L+++G+++ GTP +LK + + + ME
Sbjct: 508 EKGVTVMVTTHFMDEAEY-CDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTME 561
Score = 114 bits (283), Expect = 9e-25
Identities = 70/222 (31%), Positives = 120/222 (53%), Gaps = 3/222 (1%)
Query: 7 VAVSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ ++ LEK + + A+ + I G + GL+GP+GAGK+T +++LA LL P G A
Sbjct: 6 ITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSAT 65
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G D +K + ++ Y+P++ G Y+ LT +E L A L + ++ +E
Sbjct: 66 VIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEF 125
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
+ LG S GM ++L LA L+ +PK+ +LDEP G+D ++ E+ + + E +
Sbjct: 126 TSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA 185
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
EG+ L S+ + E E C V L+++G +L G P+ L +
Sbjct: 186 GEGMLILWSTSYLDEAEQ-CRDVLLMNEGELLYQGEPKALTQ 226
>pir||T50566 probable ABC-type transport protein, ATP-binding component
[imported] - Streptomyces coelicolor
>gi|6469242|emb|CAB61703.1| (AL133220) probable ABC
transporter, ATP-binding component. [Streptomyces
coelicolor A3(2)]
Length = 365
Score = 150 bits (376), Expect = 1e-35
Identities = 84/229 (36%), Positives = 128/229 (55%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+AV V L K YG+ KAL GV + EG + G++GPNGAGK+T ++IL+TL+ P G+A
Sbjct: 35 SAVTVRGLVKHYGETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQAH 94
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G+DVV++ ++R++I + A ++L G E L + +L R A +E
Sbjct: 95 VAGYDVVRQPRQLRRVIGLTGQYASVDEKLPGWENLYMIGRLLDLSRRDARTRADELLER 154
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L E STYS GM RRL LA +++ P + LDEPT+GLD E+ +K
Sbjct: 155 FSLTEAGKRPASTYSGGMRRRLDLAASMIGHPAVLFLDEPTTGLDPRTRNEVWDEVKRMV 214
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
+GVT L+++ M E E L + ++ +G+++ G ELK + L
Sbjct: 215 GDGVTVLLTTQYMEEAEQLASELTVVDRGKVIANGGIEELKAKVGGRTL 263
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 150 bits (376), Expect = 1e-35
Identities = 78/218 (35%), Positives = 125/218 (56%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K +GK + ++ ++ +G ++G +GPNGAGK+TT+K+L L PT G ++
Sbjct: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G ++ +E ++ + + Y+PE AY +T E+L +M +L KA + + +G
Sbjct: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+G +K+ S G +R+L A ALM P+L ILDEPTS LD + E I E +K
Sbjct: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
G T ISSH + E+E +C+ V LI G+++E G R+L
Sbjct: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 150 bits (375), Expect = 1e-35
Identities = 82/218 (37%), Positives = 124/218 (56%), Gaps = 1/218 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K YG A++ V F +++GEI G +GPNGAGK+TT++ILA + T G V
Sbjct: 2 IEVEHLSKVYGSTTAIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATTGTVRVA 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G DV +++ VRK I YLPE Y +T +L F+A + + + +E
Sbjct: 62 GFDVHEQSLAVRKRIGYLPENPPLYGDMTVASFLNFVASIKGVKPGDRRQRVIWAMERCQ 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E+ + SKG +R+ +A+A++ P + ILDEPT GLD E+R IK + E
Sbjct: 122 LTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEVRNLIKSLA-E 180
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
T ++S+H + EV CDRV +I++GR++ TP L
Sbjct: 181 DHTIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNL 218
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 150 bits (374), Expect = 2e-35
Identities = 85/221 (38%), Positives = 128/221 (57%), Gaps = 6/221 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+++ +L K Y +A++ VSF + E E L+GPNGAGK+TTL++LA LL PT G ++
Sbjct: 2 LSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKLL 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G E R+LI YLP+ Y +T E+L F +L RK ++ + +E G
Sbjct: 62 G-----EKKLDRRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEMLEFVG 116
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E + ++ YS GM +RL LA+AL+ KPK ILDEP S LD FE+ ++E K
Sbjct: 117 LHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMRELKKH 176
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ L S+H + + E +CD+V ++ G I G +ELK++
Sbjct: 177 -MAVLFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQ 216
>pir||C70529 probable ABC transporter - Mycobacterium tuberculosis (strain
H37RV) >gi|2181979|emb|CAB09479.1| (Z96072) hypothetical
protein Rv2688c [Mycobacterium tuberculosis]
Length = 301
Score = 150 bits (374), Expect = 2e-35
Identities = 86/205 (41%), Positives = 121/205 (58%), Gaps = 4/205 (1%)
Query: 21 ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKL 80
A+RG+ F + GEIFGL+GP+GAGKSTT K+L LL GG+A V+ + + + +
Sbjct: 34 AVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQATVWDKEPAEWGPDYYER 93
Query: 81 ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSK 140
I E Y++LTG E L F A LYA + ++L GL + + V YSK
Sbjct: 94 IGVSFELPNHYQKLTGYENLRFFASLYAGATADPMQLLAA----VGLADDAHTLVGKYSK 149
Query: 141 GMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEV 200
GM RL AR+L+ P+L LDEPTSGLD +NA +I+ I + G T +++H+M
Sbjct: 150 GMQMRLPFARSLINDPELLFLDEPTSGLDPVNARKIKDIIVDLKARGRTIFLTTHDMATA 209
Query: 201 EYLCDRVALIHKGRILEVGTPRELK 225
+ LCDRVA + GRI+ + +P ELK
Sbjct: 210 DELCDRVAFVVDGRIVALDSPTELK 234
>pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9949530|gb|AAG06782.1|AE004760_10 (AE004760)
NosF protein [Pseudomonas aeruginosa]
Length = 304
Score = 150 bits (374), Expect = 2e-35
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 6/224 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ V + YG + AL G+ ++E GE+ GL+G NGAGK+TT+K++ LL P+ GR
Sbjct: 1 MSLVEIDGATLRYGALTALSGLDLRLEPGEVLGLLGHNGAGKTTTIKLVLGLLAPSEGRV 60
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
V GHD + E R+ + YLPE Y +L+G E L A+L +A ++L E
Sbjct: 61 RVLGHDA--RSLEARRQLGYLPENVTFYPQLSGAETLRHFARLKGVAPAEAARLL----E 114
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
GLG ++ TYSKGM +RL LA+AL+ +P+L +LDEPT GLD + E+ + +
Sbjct: 115 QVGLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPLATVELYQLLDRL 174
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+G ++ SH + VE DR A++ GR+ G+ EL+ +
Sbjct: 175 RGQGTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELRRK 218
>pir||S32908 hypothetical protein 4 - Streptomyces antibioticus
>gi|153382|gb|AAA26793.1| (L06249) ATP-binding protein
[Streptomyces antibioticus]
Length = 325
Score = 149 bits (373), Expect = 2e-35
Identities = 82/227 (36%), Positives = 127/227 (55%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V L K YG+ KAL GV + EG + G++GPNGAGK+T ++IL+TL+ P G+A V
Sbjct: 1 MTVRGLVKHYGETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQATVA 60
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+DVV++ ++R++I + A ++L G E L + +L ++A +E
Sbjct: 61 GYDVVRQPRQLRRVIGLTGQYASVDEKLPGWENLYLIGRLLDLSRKEARARADELLERFS 120
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E TYS GM RRL LA +++ +P + LDEPT+GLD E+ +K +
Sbjct: 121 LTEAARRPAGTYSGGMRRRLDLAASMIGRPAVLYLDEPTTGLDPRTRNEVWDEVKAMVGD 180
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
GVT L+++ M E E L + ++ +GR++ G ELK R L
Sbjct: 181 GVTVLLTTQYMEEAEQLASELTVVDRGRVIAKGGIEELKARVGGRTL 227
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 149 bits (372), Expect = 3e-35
Identities = 82/219 (37%), Positives = 125/219 (56%), Gaps = 5/219 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V +N+ K +G AL ++ +++ GEI+G IGPNGAGKSTT++IL +L + G A++F
Sbjct: 13 VKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEAKIF 72
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G DV +A E+ K ++Y+P + + LTG E ++ KL +K +L
Sbjct: 73 GKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDHFIERFKLDP 132
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ K TYSKG +++ L A L ILDEPTSGLD + + + E +
Sbjct: 133 -----SKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEAKEA 187
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
G + L+SSH + EVE LCD+V +I +G ++E GT EL+
Sbjct: 188 GKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELR 226
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 149 bits (372), Expect = 3e-35
Identities = 80/221 (36%), Positives = 125/221 (56%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ +L K YG KA+ ++ +IE+ IFG +GPNGAGK+TT+K+L L+ P+ G A V
Sbjct: 4 AIETFDLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGTARV 63
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+D++K EVR+ I +P++ Y+ LT E +E A Y E ++ +EL
Sbjct: 64 AGYDILKNPDEVRQQIGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKESRIEELMELV 123
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
+ + V S G +++ L +L+ +P + LDEPT GLD + I E +
Sbjct: 124 DIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKRVLWDLIDELNS 183
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
G T ++ SH+M EVE LCD V +I++G + TP+ LK+
Sbjct: 184 SGHTIILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKD 224
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 149 bits (372), Expect = 3e-35
Identities = 83/224 (37%), Positives = 135/224 (60%), Gaps = 5/224 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ +NL Y V A+ ++ +++EGEI+G +GPNGAGK+TT+++L L+ + G ++F
Sbjct: 8 IETNNLTMTYKHVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIKIF 67
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G D+ + ++ K I L E Y L+G + LE + K+ + ++L+L + L+
Sbjct: 68 GKDLKQHRLDILKNIGALVESPSYYPHLSGEDNLETVRKIVKVPKSRIAEVLEL-VRLTK 126
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ +R KV YS GM +RL +A AL+ P+L ILDEPT+GLD EIR I KE
Sbjct: 127 VADR---KVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLPKE 183
Query: 187 -GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYN 229
G+T L+SSH + EVE + +V +I KG+++ + EL+++ N
Sbjct: 184 YGITVLLSSHLLSEVEQVASQVGIIAKGKLIFQDSIEELRKKAN 227
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 149 bits (372), Expect = 3e-35
Identities = 75/209 (35%), Positives = 131/209 (61%), Gaps = 4/209 (1%)
Query: 18 KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEV 77
KV++L+ +S +++GE FGL+GPNGAGK+T LKIL ++ +GGR + G + ++
Sbjct: 66 KVESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRASGGRGTLLGKPIGDRQTKQ 125
Query: 78 RKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDK--V 135
R + YLPE A Y LT E+L+++ L+ ++ ++ + +L GL ++ K +
Sbjct: 126 R--VGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRILAMCDLVGLAQKTAKKKQL 183
Query: 136 STYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSH 195
YSKGM++R+ +A+AL+ P++ LDEP SGLD + +++R I ++G T +SH
Sbjct: 184 RQYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQVREIILSLKEQGKTIFFNSH 243
Query: 196 NMLEVEYLCDRVALIHKGRILEVGTPREL 224
+ +VE +CDR+A++ +G +L G+ E+
Sbjct: 244 ILADVEQICDRIAILARGELLCSGSLAEV 272
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 149 bits (372), Expect = 3e-35
Identities = 82/219 (37%), Positives = 125/219 (56%), Gaps = 5/219 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V +N+ K +G AL ++ +++ GEI+G IGPNGAGKSTT++IL +L + G A++F
Sbjct: 4 VKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEAKIF 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G DV +A E+ K ++Y+P + + LTG E ++ KL +K +L
Sbjct: 64 GKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDHFIERFKLDP 123
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ K TYSKG +++ L A L ILDEPTSGLD + + + E +
Sbjct: 124 -----SKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEAKEA 178
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
G + L+SSH + EVE LCD+V +I +G ++E GT EL+
Sbjct: 179 GKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELR 217
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 148 bits (371), Expect = 4e-35
Identities = 87/238 (36%), Positives = 144/238 (59%), Gaps = 17/238 (7%)
Query: 3 LVTAVAVSNLEKDY-GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
+ A+ + L+K Y G V+ALRG+ Q+E G+ + L+GPNGAGKSTT+ I+++L++ T G
Sbjct: 1 MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSG 60
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKA----EKM 117
R VFG+D+ K+ ++ + +P+E T + + A Y + ++A EK
Sbjct: 61 RVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKY 120
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
LK +L G+R N++ S GM RRL++ARALM +PKL ILDEPT+G+DI E+R
Sbjct: 121 LK---QLDLWGKR-NERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDI----ELR 172
Query: 178 RT----IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
R+ +K+ + +G T ++++H + E E LC + +I G ++E + + L + +E
Sbjct: 173 RSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSE 230
>pir||D70984 probable drrA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1781083|emb|CAB06095.1| (Z83857) drrA [Mycobacterium
tuberculosis]
Length = 331
Score = 148 bits (371), Expect = 4e-35
Identities = 88/224 (39%), Positives = 126/224 (55%), Gaps = 2/224 (0%)
Query: 6 AVAVSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
AV V+ + K YGK K AL VSF++ GE+ GL+GPNGAGK+T + IL+TL P G A
Sbjct: 7 AVVVNGVRKTYGKGKIVALDDVSFKVRRGEVIGLLGPNGAGKTTMVDILSTLTRPDAGSA 66
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+ G+DVV E + VR+ I ++ L+G + L +L+ A K +E
Sbjct: 67 IIAGYDVVSEPAGVRRSIMVTGQQVAVDDALSGEQNLVLFGRLWGLSKSAARKRAAELLE 126
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L +V TYS GM RR+ +A L+V+P++A LDEPT+GLD + I + F
Sbjct: 127 QFSLVHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASF 186
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
K G+ L+++ + E + L DR+ LI G I+ GT ELK R
Sbjct: 187 KKLGIATLLTTQYLEEADALSDRIILIDHGIIIAEGTANELKHR 230
>gb|AAD43475.1|AF125260_3 (AF125260) NosF [Rhodobacter sphaeroides f. sp. denitrificans]
Length = 294
Score = 148 bits (371), Expect = 4e-35
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 6/221 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ +S + + +G + AL VSF + GE L+G NGAGKST +K++ L+ GGR V
Sbjct: 2 LTLSQVTRTFGGLTALDAVSFAVAPGERVALLGHNGAGKSTLMKLVLGLIAADGGRISVG 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
GH A+ R L +YLPE A + LTG E L + +L +D KA +L E G
Sbjct: 62 GHAPGSHAA--RALTAYLPENAAFHPALTGAETLRYYLRLRGEDPAKAGALL----ERVG 115
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
LG ++ TYSKGM +R+ LA+AL+ P+L +LDEPTSGLD ++ + + E + +
Sbjct: 116 LGAAAQRRIGTYSKGMRQRVGLAQALIGHPRLLVLDEPTSGLDPVSRRDFYALLAELAAD 175
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
G L+SSH + EVE DR+A++ GR++ T L+ +
Sbjct: 176 GAAILLSSHALTEVEARTDRIAILSGGRLMANDTLANLRRQ 216
>emb|CAC11378.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 239
Score = 147 bits (367), Expect = 1e-34
Identities = 91/230 (39%), Positives = 133/230 (57%), Gaps = 7/230 (3%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ + +++ K +G KAL G+SF +E E LIGPNGAGKSTTLKILA L+ P G
Sbjct: 4 MNCIEFNDVTKSFGTKKALDGLSFDVECQESVALIGPNGAGKSTTLKILAGLIKPDSGSV 63
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+V G D ++ E ++L+ YLPE+A Y L+ E LE++ L + + E+ ++ +
Sbjct: 64 KVGGFD--PDSIEAKRLMGYLPEDASPYLTLSVKENLEYIGAL--RKTEDLEQKVEFLLN 119
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L L E N +VST S+G ++L +A A++ PK+ +LDEP + LDI +I IK F
Sbjct: 120 LMELNEYRNSRVSTLSRGNRQKLSIALAIIHDPKIMLLDEPLNYLDIPTQEKI---IKYF 176
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
+ TFL+S+H M E R +I+ GR + G ELKE ENL
Sbjct: 177 NSMNATFLVSTHIMSIAERFTRRAIIINSGRQIWTGQIDELKEMSREENL 226
>pir||S73019 daunorubicin resistance protein drrA - Mycobacterium leprae
>gi|467205|gb|AAA17362.1| (U00023) drrA; L518_F2_43
[Mycobacterium leprae]
Length = 331
Score = 146 bits (364), Expect = 3e-34
Identities = 91/238 (38%), Positives = 131/238 (54%), Gaps = 7/238 (2%)
Query: 6 AVAVSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
AV V + K YGK K AL VSF ++ GE+ GL+GPNGAGK+T + IL+TL P G A
Sbjct: 7 AVMVRGVRKTYGKGKIIALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILSTLTRPDRGLA 66
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
V G+DVV E + VR+ I ++ +L+G + L +LY A + +E
Sbjct: 67 TVAGYDVVSEPAGVRRSIMVTGQQVAVDDQLSGEQNLILFGRLYGLSKSVARVRTQELLE 126
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L +V TYS GM RR+ +A L+V+P++A LDEPT+GLD + I + F
Sbjct: 127 QFDLLHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASF 186
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
+ G+ L+++ + E + L DR+ LI G ++ GT ELK R + E F E V
Sbjct: 187 KQIGIATLLTTQYLEEADELSDRIILIDHGTVIAEGTASELKHR-----VGETFCEIV 239
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 146 bits (364), Expect = 3e-34
Identities = 80/210 (38%), Positives = 127/210 (60%), Gaps = 4/210 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V +L K Y K ++ G++ +I GEI+G +GPNGAGK+TT+++L L+ PT G E+F
Sbjct: 6 VVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNIEIF 65
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G ++ K ++ + I L E Y LTG E LE + +L ++ ++L+ + LS
Sbjct: 66 GQNLNKNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPEQQVNEVLET-VRLSK 124
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ RL + YS GM +RL +A AL+ P L ILDEPT+GLD EIR IKE K
Sbjct: 125 VANRLTKE---YSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELPKS 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRIL 216
G++ ++SSH + E++ + +V +I+ G+++
Sbjct: 182 GMSVIVSSHLLSEIDQMATQVGIINNGKMI 211
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 146 bits (364), Expect = 3e-34
Identities = 81/231 (35%), Positives = 139/231 (60%), Gaps = 9/231 (3%)
Query: 6 AVAVSNLEKDY-GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
A+ + L K Y G +AL+G+S Q+++G+ + L+GPNGAGKSTT+ I+++L++ T G+
Sbjct: 3 ALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVT 62
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
VFG+D+ + ++ + +P+E T + + A Y A++ K +
Sbjct: 63 VFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQ 122
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L E+ +++ S GM RRL++ARALM +P+L ILDEPT+G+DI E+RR++ EF
Sbjct: 123 LDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDI----ELRRSMWEFL 178
Query: 185 K----EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
K +GVT ++++H + E E LC + +I +G ++E T + L + + E
Sbjct: 179 KQINAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVE 229
>emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 866
Score = 145 bits (363), Expect = 4e-34
Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 3/204 (1%)
Query: 21 ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKL 80
A+R +SF++E+G++ GL+GPNGAGK+TTL++L L+ P G VFGH ++ + V
Sbjct: 582 AVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIKPDDGEIRVFGH-AIRPGAPVLSR 640
Query: 81 ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSK 140
+ E AG L+G E LE + + A L +E++GLG+ L V TYS+
Sbjct: 641 VGAFVEGAGFLPHLSGRENLELYWRATGRPPENAH--LDEALEIAGLGDALARAVRTYSQ 698
Query: 141 GMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEV 200
GM +RL +A+A++ P L ILDEPT+GLD E+R + ++ G T ++SSH + EV
Sbjct: 699 GMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIRYAAAGRTVIVSSHLLAEV 758
Query: 201 EYLCDRVALIHKGRILEVGTPREL 224
E C + ++ +GR+++ G E+
Sbjct: 759 EQSCTHLVVMDRGRLVQAGPVAEI 782
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 145 bits (362), Expect = 5e-34
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 1/222 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ ++ + K Y A+ +S I +GEIFGL+GPNGAGK+T++ ++ L PT G +V
Sbjct: 6 IKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTVQVA 65
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G D K EV++ + YLP+ G Y +TG+E L + A L +A + +E G
Sbjct: 66 GIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTLLEKVG 125
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK- 185
L E K YS+GM +RL LA LM P++ ILDEPT G+D + I+ ++
Sbjct: 126 LTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIRNLNQN 185
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
E +T L+ SH++ +V+ +CDRV + G++L G +L +R
Sbjct: 186 ENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKR 227
>gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; NosF [Pseudomonas fluorescens]
Length = 305
Score = 145 bits (362), Expect = 5e-34
Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 6/223 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ V + + + YG V LRG+ + +GE+ GL G NGAGK+TT+K++ LL + G
Sbjct: 1 MNVVEIEGVSQRYGDVAVLRGLDLTLAQGEVLGLFGHNGAGKTTTMKLILGLLRASEGEV 60
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
VFG VR+++ YLPE Y +L+GLE L A+L + E++L+ +
Sbjct: 61 RVFGR--APSDPSVRQMLGYLPENVMFYPQLSGLETLRHFARLKGAAPEQVERLLE-EVG 117
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L+G R +V TYSKGM +RL LA+AL+ +P+L +LDEPT GLD + ++ + +
Sbjct: 118 LAGAARR---RVRTYSKGMRQRLGLAQALLGQPRLLLLDEPTVGLDPIATQDLYQLLDRL 174
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
+G + ++ SH + VE +R A++ +GR+L +G+ L+E
Sbjct: 175 RWQGTSIILCSHVLPGVEAHINRAAILTRGRLLALGSLARLRE 217
>pir||F72742 probable transport ATP-binding protein APE0471 - Aeropyrum pernix
(strain K1) >gi|5104118|dbj|BAA79434.1| (AP000059) 356aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 356
Score = 145 bits (361), Expect = 6e-34
Identities = 82/208 (39%), Positives = 118/208 (56%), Gaps = 6/208 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V L K YG V+ALRGVSF + GE+FG +GPNGAGK+TT+++L PT G A VF
Sbjct: 58 IEVEGLVKRYGSVEALRGVSFSVLSGEVFGYLGPNGAGKTTTIRVLMGFSRPTSGSARVF 117
Query: 67 GHDVVKE-ASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G ++ AS VR+ + Y+P E Y ++G L++ +L SR + L L
Sbjct: 118 GVELYNPGASGVRRRVGYVPGEFEFYGGVSGGRMLDYWCRLVGGCSRGVVREL-----LE 172
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L V TYS+GM + L L A +P L ++DEPT+GLD + + ++ ++
Sbjct: 173 AFPLPLERAVGTYSRGMKQMLALVMAFSHEPDLVVMDEPTTGLDPLARGRVLDFVRSKAR 232
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKG 213
EGVT SSH + EV+ + DRV L+ G
Sbjct: 233 EGVTVFFSSHVLSEVQRVADRVGLLRSG 260
>emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus]
Length = 248
Score = 144 bits (360), Expect = 8e-34
Identities = 89/243 (36%), Positives = 132/243 (53%), Gaps = 10/243 (4%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K Y ++ VS I++G I+G +GPNGAGKSTT+K+L L PT G ++
Sbjct: 5 ITTEKLTKKYKNFTSVNKVSLHIKKGSIYGFLGPNGAGKSTTMKMLLGLTAPTSGSFQID 64
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + + K I E Y LTG E L+ + ++ E L L + LS
Sbjct: 65 GKQFPNDRLTILKRIGSFIEAPSFYANLTGRENLDIIRRILGLPQNAVEDALDL-VGLSQ 123
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF-SK 185
G+RL K YS GM +RL LA AL+ +P + ILDEPT+GLD EIR IK +
Sbjct: 124 FGDRLAKK---YSLGMKQRLGLAGALLGRPPILILDEPTNGLDPSGIHEIRNLIKSLPTF 180
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER-----YNAENLEEVFMEA 240
T LISSH + E+E + D + +++ GR+L G+ +LK+ + +NLE++F+
Sbjct: 181 YDCTVLISSHMLSEIELIADDIGILNHGRMLFEGSLDDLKQTALQSGFATDNLEDMFLSM 240
Query: 241 VKN 243
++N
Sbjct: 241 IEN 243
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 143 bits (358), Expect = 1e-33
Identities = 82/208 (39%), Positives = 121/208 (57%), Gaps = 4/208 (1%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
+ L+K G + L+ +S + EGEI GL+GPNG+GK+T ++I+ LL G + G
Sbjct: 8 IEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTISGF 67
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
E + + + + E Y LTG E L+ A ++ K A++ L +E GL
Sbjct: 68 QHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFANMHKK---IADERLDEVVERVGLT 124
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK-EG 187
++DKV TYS GM +RL +A+A++ +PKL ILDEPT+GLD + R IKE ++ EG
Sbjct: 125 SAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAEMEG 184
Query: 188 VTFLISSHNMLEVEYLCDRVALIHKGRI 215
L ++H + EVE LCDRV +I KG I
Sbjct: 185 TAVLFATHLLREVEDLCDRVIIIQKGEI 212
>emb|CAC11214.1| (AL445063) gliding motility protein (gldA) related protein
[Thermoplasma acidophilum]
Length = 260
Score = 143 bits (358), Expect = 1e-33
Identities = 74/236 (31%), Positives = 135/236 (56%), Gaps = 2/236 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
++ + N+ YG+ AL GV+ I EG I+G++GPNG+GK+T ++I+ LL T G A V
Sbjct: 5 SIKIDNVSMRYGEKLALDGVTLDIPEGTIYGILGPNGSGKTTLMRIILGLLKQTAGSAIV 64
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+D ++ +++++ Y+PE Y+ +T E F+A + D + + I+
Sbjct: 65 CGYDSTRDQMKIKEISGYVPETPILYESMTPSELFSFIASIRRMDEGTFRRRVDALIDAF 124
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
G+ E +N+ + + S G +++ + A++ PK+ I+DE +GLD +A + + +
Sbjct: 125 GIAEYINEFIGSLSFGNRQKVAIISAILHDPKILIVDEGINGLDPRSAKLFKSILTDMRD 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA--ENLEEVFME 239
G + S+H + E LCD VA+++ G I+ GT +L+ NA +NLEE+F++
Sbjct: 185 HGKIIVFSTHILEIAESLCDHVAILYNGHIVANGTIADLRNEANAPSQNLEEIFLK 240
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 143 bits (357), Expect = 2e-33
Identities = 80/220 (36%), Positives = 118/220 (53%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + L K YG L G+ + EG +F L+GPNGAGK+T +KIL+TL+ P G V
Sbjct: 5 AITANGLRKSYGDKTVLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILSTLVTPDAGDIRV 64
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
GHD+ VR I + + +TG E + MA L+ + ++ +E
Sbjct: 65 GGHDLASAPQAVRGAIGVTGQFSAVDGLITGEENMLLMADLHHLPRPEGRRVAAELLERF 124
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L E STYS GM RRL +A L+ P++ LDEPT+GLD + + + I+
Sbjct: 125 DLTEAAGKPASTYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSRHTMWQIIRALVT 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+GVT +++ + E + L DR+A++H GRI GT ELK
Sbjct: 185 DGVTVFLTTQYLEEADELADRIAVLHDGRIAAEGTAEELK 224
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 143 bits (356), Expect = 2e-33
Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 6/242 (2%)
Query: 2 VLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
++ TA G V+A+RG+ + EGEI G +GPNGAGK+TTL++L TLL PTGG
Sbjct: 3 IISTAGLARTFATRRGPVEAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPTGG 62
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLY-AKDSRKAEKMLKL 120
A V GHD+ + + VR Y+ + G ++T E L +LY +R AE+ +L
Sbjct: 63 AATVAGHDLATDPAGVRAACGYVAQSGGVDPQITVREELVTQGRLYRLSRARAAERAGEL 122
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
+L GL L+ + S G RRL +A AL +PK+ LDEPT+GLD + ++ +
Sbjct: 123 ARDL-GLTGLLDRRCGALSGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDLV 181
Query: 181 KEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE---NLEEV 236
+ G T +++H + E + L DR+ ++ G ++ GTP LK Y L++
Sbjct: 182 RRLRDAHGTTVFLTTHYLDEADALSDRLVVVDGGTVVAEGTPAALKLEYGGSPDATLQDT 241
Query: 237 FM 238
F+
Sbjct: 242 FL 243
>gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporter ATP-binding
protein; Trp3 [Halobacterium sp. NRC-1]
Length = 252
Score = 143 bits (356), Expect = 2e-33
Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 4/237 (1%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ L K YG A+ + + G ++G +GPNGAGK+TT+++L +L PT G AEV
Sbjct: 5 AIRADGLTKRYGDEAAVDDLDLAVPAGSVYGFLGPNGAGKTTTMRLLTSLTDPTAGTAEV 64
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V A+ + I YLP + + LTG E L +A+L+ D +A+ ++ +E
Sbjct: 65 AGVPVTDRAALTPR-IGYLPADPPVFDELTGWEQLRHVARLHGLDDGEADTRIESLLERF 123
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + ++ +YS GM +++ + A++ P + LDEPTSGLD A +R T+ + S
Sbjct: 124 DLLADADRRIESYSTGMTKKVGVVAAMLHDPDVLFLDEPTSGLDPRAARTVRDTVADLSA 183
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK---ERYNAENLEEVFME 239
T L+S+H + V+ L D + +I G ++ G P LK +A +LE VFME
Sbjct: 184 GDATVLLSTHVLPVVDELADTIGVIDDGVLVADGDPENLKSTAREGSAADLETVFME 240
>pir||S74476 ABC-type transport protein slr1113 - Synechocystis sp. (strain PCC
6803) >gi|1651700|dbj|BAA16628.1| (D90899) ABC
transporter [Synechocystis sp.]
Length = 332
Score = 142 bits (354), Expect = 4e-33
Identities = 79/241 (32%), Positives = 134/241 (54%), Gaps = 2/241 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV L K + + A+ V I EG ++GL+GPNGAGK+T +++LAT PT G +
Sbjct: 13 AVVTQGLTKRFDRQGAVTNVDLSIAEGAVYGLMGPNGAGKTTLIRMLATAEEPTKGEIYL 72
Query: 66 FGHDVVKEASEVR--KLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
FG +V A +R + + YLP++ Y+ L +YL++ A+LY + ++ +E
Sbjct: 73 FGDRLVAGADNLRIKQYLGYLPDDYPLYEDLNVWDYLDYFARLYHLKNPGRRHRIQEVLE 132
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L L + + ++++ S+GM +RL LAR ++ +P L +LDEP SGLD + + R I+
Sbjct: 133 LVQLTSKRHSRINSLSRGMKQRLSLARTIIHEPILLLLDEPVSGLDPLARQQFRDIIRVL 192
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKN 243
G+T LISSH + ++ LC + ++ G ++E T +L R + +E V+
Sbjct: 193 QAAGMTILISSHVLSDLAELCTAIGVMELGCLVESTTLADLYNRLGQRTISIFLLEGVEQ 252
Query: 244 V 244
+
Sbjct: 253 L 253
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 142 bits (354), Expect = 4e-33
Identities = 84/223 (37%), Positives = 123/223 (54%), Gaps = 6/223 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K+Y K+ ++ + ++ +G ++G +GPNGAGKSTTLK+L L PT G +
Sbjct: 5 IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL 64
Query: 67 GHDV-VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G ++ K + K I L E Y LTGLE + M +L + + LK +
Sbjct: 65 GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALK----IV 120
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF-S 184
L + N KVS YS GM +RL +A A+M PKL ILDEPT+GLD EIR IK
Sbjct: 121 RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE 180
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
K G+T LISSH + E++ + + +I+ G ++ + +EL R
Sbjct: 181 KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR 223
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 142 bits (354), Expect = 4e-33
Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 16/237 (6%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ + + NLEK K K + G+S ++ GE+ GL+GPNGAGK+TT ++ L+ P+ G+
Sbjct: 1 MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKV 60
Query: 64 EVFGHDVVKEA--SEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSR----KAEKM 117
+ G DV K+ R I YLP+E+ +K L+ + L A+++ KD + K E+M
Sbjct: 61 LLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQIFYKDKKILHDKVEQM 120
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
L+L LS RL +S S G RR +AR+LM +PK +LDEP +G+D + EI+
Sbjct: 121 LEL---LSIEPIRLRKGLSL-SGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQ 176
Query: 178 RTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRIL------EVGTPRELKERY 228
IKE + G+ LI+ HN+ E +CDR +I G +L E+ T +++K+ Y
Sbjct: 177 TLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEIATNKDVKKYY 233
>pir||H70610 probable ABC-typetransmembrane transport portein - Mycobacterium
tuberculosis (strain H37RV) >gi|3261727|emb|CAB07840.1|
(Z93777) hypothetical protein Rv1218c [Mycobacterium
tuberculosis]
Length = 311
Score = 141 bits (353), Expect = 5e-33
Identities = 78/216 (36%), Positives = 127/216 (58%), Gaps = 9/216 (4%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + L K +G V+AL G+ + EGE+ G +GPNGAGKSTTL+IL L+ GG +
Sbjct: 10 IEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSVRLL 69
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYA--KDSRKAEKMLKLGIEL 124
G D +A ++ + I+Y+P + + LTG E ++ +A++ ++R+AE + + G++
Sbjct: 70 GGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLARMRGGIDNARRAELIERFGLDP 129
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
+ K TYSKG +++ L AL L +LDEP+SGLD + ++ I E
Sbjct: 130 T-------KKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEAR 182
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGT 220
+ GVT L+SSH + E E LC++V +I G+ +E G+
Sbjct: 183 QRGVTVLLSSHILAETEALCEKVTIIRAGKTVESGS 218
>gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 309
Score = 141 bits (351), Expect = 9e-33
Identities = 83/209 (39%), Positives = 122/209 (57%), Gaps = 2/209 (0%)
Query: 18 KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEV 77
++KA+ VSF+IE L+GPNGAGK+T +K+L+TL+ P+ G A V G+ + KE +V
Sbjct: 17 EIKAVDDVSFEIERNSTGALVGPNGAGKTTIIKMLSTLIIPSSGDALVNGYSITKEEKKV 76
Query: 78 RKLISYLP-EEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVS 136
R+ I + E Y RLT LE L F A L A K K +E+ GL E N
Sbjct: 77 RESIGLVTVSERLFYYRLTALENLIFFASLQNLSLSDARKRAKEVLEIVGLSEWGNIPYM 136
Query: 137 TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHN 196
+S GM R+L LARAL+ P + +LDEPT GLD ++A R ++ ++ T L++SH
Sbjct: 137 KFSTGMQRKLALARALITDPPVLLLDEPTLGLDPLSARMFRDLVRRIGRD-KTILLTSHY 195
Query: 197 MLEVEYLCDRVALIHKGRILEVGTPRELK 225
M ++E L +++ L+ KG+ + G LK
Sbjct: 196 MKDIEELAEKIILLKKGKAIAEGNKDNLK 224
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 140 bits (350), Expect = 1e-32
Identities = 81/219 (36%), Positives = 121/219 (54%), Gaps = 1/219 (0%)
Query: 17 GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASE 76
G V+A+ GV F + GEI G +GPNGAGK+TT+++L TLL P+ G A + G D++ E ++
Sbjct: 16 GPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSGTAVIAGRDLLHEPAK 75
Query: 77 VRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVS 136
VR I Y+ + GA L +LY +AE I GL E + +
Sbjct: 76 VRTHIGYVSQAGGAKPSSPVRRDLVLQGRLYGMSRSEAEARADEVITQLGLEELADRIIQ 135
Query: 137 TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE-GVTFLISSH 195
T S RR+ +A LM +P+L LDEPT+ LD + ++ I+ E G T +++H
Sbjct: 136 TLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIRRLRDERGTTVFLTTH 195
Query: 196 NMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLE 234
+ E + LCDRV +I KGRI+ +PR LK + + +E
Sbjct: 196 YLDEADSLCDRVLIIDKGRIIAEDSPRSLKAAISHDTIE 234
>pir||F72230 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4982211|gb|AAD36705.1|AE001806_15 (AE001806)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 207
Score = 140 bits (350), Expect = 1e-32
Identities = 82/201 (40%), Positives = 120/201 (58%), Gaps = 7/201 (3%)
Query: 12 LEKDYGKVK-ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
++K YGK K L GVSF +E+G+ G++G N AGK+T LKILAT+L P GR +F +
Sbjct: 1 MKKSYGKKKKVLDGVSFSLEKGKSLGIVGQNSAGKTTLLKILATILKPDEGRLFLFEKNA 60
Query: 71 VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
+K+ S +RK I+++PE + LT E L F ++L + KM + L
Sbjct: 61 LKDLSYIRKRIAFVPEFPALLEELTVRENLLFFSRL------RGVKMENFIVSELMLEPF 114
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTF 190
+ V SKG+ +R LA AL P+L ILDEPTSGLD+ +A +R +K +EG+T
Sbjct: 115 MGTLVRNASKGVKQRTALAVALFGNPELLILDEPTSGLDVESASIVRSKLKRLKEEGITV 174
Query: 191 LISSHNMLEVEYLCDRVALIH 211
+ISSH ++E LCD + +I+
Sbjct: 175 IISSHIREDIEELCDEILVIN 195
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 139 bits (347), Expect = 3e-32
Identities = 76/223 (34%), Positives = 131/223 (58%), Gaps = 6/223 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ VSN+ K YG AL VS ++++ E LIGPNGAGK+T ++IL TL+ P G ++
Sbjct: 2 IVVSNIVKKYGNKIALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTLMKPDRGEVQIL 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + K + + K + Y+ E LTG + LE AK+ D + ++L+ +E+
Sbjct: 62 GENPFK-SKRIFKEVGYVQEIPNYPPFLTGKQVLELSAKIRGVDKSEVNRVLEF-VEMEN 119
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS-K 185
N+ + YSKGMV+R+ +A AL+ P + I+DEP G+D + + + R + + K
Sbjct: 120 YA---NNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKRK 176
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ V+ L++SH + +V+ L DR+ +I+KG+I+ GT ++ + +
Sbjct: 177 DNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMVKEF 219
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 139 bits (347), Expect = 3e-32
Identities = 78/232 (33%), Positives = 126/232 (53%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ ++ ++K +G + G+SF + GE FGL+GPNGAGKST ++L + P G+ V
Sbjct: 5 AIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITV 64
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V + RK I +P+ + T E L + + +RK ++++ +E +
Sbjct: 65 LGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFA 124
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + +V S GM RRL LARAL+ P+L ++DEPT+GLD I ++
Sbjct: 125 RLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLA 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
G T ++++H M E E LCDR+ ++ GR L G+P L E + + E+F
Sbjct: 185 RGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEEHIGCQVIEIF 236
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 139 bits (346), Expect = 4e-32
Identities = 82/251 (32%), Positives = 140/251 (55%), Gaps = 18/251 (7%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ VS++ K YG AL +S ++++GE LIGPNGAGK+T ++IL TL+ P G ++
Sbjct: 2 IVVSSIVKKYGNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTLMKPDKGEVQIL 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + + + K I Y+ E LTG + LE AK+ D + +++L+ +E+
Sbjct: 62 GENPFRN-KRIFKAIGYVQEIPNYPPFLTGRQVLELSAKIRGVDKSEVKRVLEF-VEMEN 119
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS-K 185
N + YSKGMV+R+ +A +L+ P + I+DEP G+D + + + R + + K
Sbjct: 120 YA---NSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKRK 176
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY----------NAENLEE 235
+ V+ L++SH + +V+ L DR+ +I+KG+I+ GT ++ + + EN EE
Sbjct: 177 DNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMIKEFLGIQVIVETDEIENAEE 236
Query: 236 VF--MEAVKNV 244
+E VK V
Sbjct: 237 ALKGIEYVKGV 247
>pir||I40516 spaF protein - Bacillus subtilis
Length = 456
Score = 139 bits (346), Expect = 4e-32
Identities = 88/233 (37%), Positives = 129/233 (54%), Gaps = 13/233 (5%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
+L K +GK A+ VS +++ I+GL+GPNGAGKSTTLKIL +L T G GH
Sbjct: 19 SLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEILFDGH-- 76
Query: 71 VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
K + I L E Y LT E ++ A L + +LK +++ G++
Sbjct: 77 -KWKRSDLQTIGSLIEAPPLYDNLTAFENVKVHATLLGLSEDRIHSVLKT-VDMQHAGKK 134
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTF 190
+ +S GM +RL +A AL+ PKL ILDEPT+GLD + E+R I+ F +EG+T
Sbjct: 135 ---RAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQEGITV 191
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKN 243
++SSH + EVE + D + +I G + G E A++LE +FME VK+
Sbjct: 192 ILSSHILSEVEQIADHIGIIIDGHLGYQG------EINKADDLEHLFMEVVKS 238
>pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes
>gi|2502072|gb|AAB92604.1| (AF026542) ScnF
[Streptococcus pyogenes]
Length = 299
Score = 139 bits (346), Expect = 4e-32
Identities = 87/223 (39%), Positives = 126/223 (56%), Gaps = 8/223 (3%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + L K Y + + + EGEI+G +GPNGAGK+TT+K++ +L+ PT G +
Sbjct: 4 AIELRKLSKVYQDITTVDLEKITVREGEIYGFLGPNGAGKTTTMKMILSLVSPTLGEILI 63
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G D+ + +R +I + EE Y LTG E L K+ D E + + L
Sbjct: 64 NGEDIKGNHAYLR-VIGSMIEEPSYYPNLTGYENLLVFQKMVGFD----ESNIWPTLALV 118
Query: 126 GLGERLNDK--VSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
GL E N K V YS GM +RL LA AL+ KPK+ +LDEPT+GLD EIR I +
Sbjct: 119 GLAEENNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVKL 178
Query: 184 SKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+KE G+T ISS + E+E++ DRV +I+ GR++ G +K
Sbjct: 179 AKEKGLTVFISSQILSEIEHIADRVGIINHGRLVYEGEIEAIK 221
>gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis]
Length = 247
Score = 139 bits (346), Expect = 4e-32
Identities = 88/233 (37%), Positives = 129/233 (54%), Gaps = 13/233 (5%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
+L K +GK A+ VS +++ I+GL+GPNGAGKSTTLKIL +L T G GH
Sbjct: 19 SLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEILFDGH-- 76
Query: 71 VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
K + I L E Y LT E ++ A L + +LK +++ G++
Sbjct: 77 -KWKRSDLQTIGSLIEAPPLYDNLTAFENVKVHATLLGLSEDRIHSVLKT-VDMQHAGKK 134
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTF 190
+ +S GM +RL +A AL+ PKL ILDEPT+GLD + E+R I+ F +EG+T
Sbjct: 135 ---RAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQEGITV 191
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKN 243
++SSH + EVE + D + +I G + G E A++LE +FME VK+
Sbjct: 192 ILSSHILSEVEQIADHIGIIIDGHLGYQG------EINKADDLEHLFMEVVKS 238
>dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes]
Length = 229
Score = 139 bits (346), Expect = 4e-32
Identities = 87/230 (37%), Positives = 134/230 (57%), Gaps = 15/230 (6%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
+ NL+K YGK L V+ I +G+++ LIGPNGAGKST +KIL L+ T G G
Sbjct: 4 IQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIFEGR 63
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
+ + ++RK+ S + EE YK L+ + ++ + + +E + + GLG
Sbjct: 64 EWSRR--DLRKIGSII-EEPPLYKNLSAYDNMKVVTTMLGV----SESTILPLLNKVGLG 116
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGV 188
V +S GM +RL +A +L+ PKL ILDEPT+GLD + E+R I+ F EG+
Sbjct: 117 NIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSEGM 176
Query: 189 TFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYN-AENLEEVF 237
T +ISSH + EVE+L D + I++G+I+ L++ Y+ +ENLEE+F
Sbjct: 177 TIMISSHILSEVEHLADFIGFIYEGKII-------LEKEYDGSENLEELF 219
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 138 bits (345), Expect = 5e-32
Identities = 77/227 (33%), Positives = 125/227 (54%), Gaps = 3/227 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + ++ K +G KA+ G+ I E ++FGL+G NGAGK+TT +++ LL T G
Sbjct: 2 LTIDHVTKTFGDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSITEGSISWK 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G V S I YLPEE G Y ++ + L ++A+L + R+A K L +E
Sbjct: 62 GRPVNYHISNK---IGYLPEERGLYPKMKVRDQLVYLARLKGMEKREAVKELGTWLERFN 118
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ + N KV +KG +++ A++ KP+L ILDEP SGLD +N ++ +
Sbjct: 119 ITDYENKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNVELLKEAVISLKNS 178
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
GV+ L SSH M VE LC+ + ++ KG+ + G +E+K + +N+
Sbjct: 179 GVSILFSSHRMEHVEELCENLCILQKGKPVVQGKLKEIKRSFGKKNV 225
>pir||T44662 nosF protein [imported] - Bradyrhizobium japonicum
>gi|3850616|emb|CAA05520.1| (AJ002531) nosF
[Bradyrhizobium japonicum]
Length = 302
Score = 138 bits (345), Expect = 5e-32
Identities = 82/219 (37%), Positives = 121/219 (54%), Gaps = 4/219 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V+V+ + K+Y V+ALR VSF + G + L+G NGAGK+T +K++ L+ P G V
Sbjct: 5 VSVTGVVKNYRTVRALRDVSFDLAPGRLSALVGHNGAGKTTLIKLMLGLIRPDQGSIRVL 64
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
D R+ + YLPE LTG E L F A+L KA L + G
Sbjct: 65 DEDPAAGEFSARRQLGYLPENVAFNAALTGRETLTFYARLKHVKPSKAWAFL----DRVG 120
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + + +V TYSKGM +RL LA+AL+ +P++ +LDEPT+GLD + E +
Sbjct: 121 LTDAADRRVGTYSKGMRQRLGLAQALLGRPRVLLLDEPTTGLDPALRQTFYEILNELRDD 180
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
G T LISSH + E+E + V ++++G + GT EL+
Sbjct: 181 GATVLISSHALNELEDRAEHVLIMNRGLLAAQGTLSELR 219
>emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans]
Length = 299
Score = 138 bits (344), Expect = 6e-32
Identities = 81/225 (36%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ + + +S L K + V+AL VS + G L+G NGAGKST +KI+ L+ G
Sbjct: 1 MTSTLTISRLTKRFQGVEALAEVSLDLGPGMRVALLGHNGAGKSTMMKIILGLIPFDAGE 60
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
V G +S+ R ++YLPE A + LTG E + L + R+A ++L
Sbjct: 61 VRVCG--AAPGSSQARMQVAYLPENAAFHPALTGEEQIRHYLSLRGESPRRAMELL---- 114
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
E GL + ++ TYSKGM +R+ LA+ L+ +P+L +LDEPTSGLD ++ + +
Sbjct: 115 ERVGLAKAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYALLDG 174
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ EG L+SSH + EVE DR+ ++ +GR++ GT EL+ R
Sbjct: 175 LAAEGAAILLSSHVLTEVEARTDRILILSQGRLVAEGTLAELRRR 219
>pir||E72636 probable nodulation ATP-binding protein I APE1548 - Aeropyrum
pernix (strain K1) >gi|5105233|dbj|BAA80547.1|
(AP000061) 338aa long hypothetical nodulation
ATP-binding protein I [Aeropyrum pernix]
Length = 338
Score = 138 bits (343), Expect = 8e-32
Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 2/223 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V L K +G A+ GVSF + +GE ++GPNG+GK+T L++++ +L P+GG V
Sbjct: 43 VEARGLRKRFGGRTAVAGVSFSVGDGERACIMGPNGSGKTTLLRMVSGVLRPSGGSVRVC 102
Query: 67 GHDVVKEA-SEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+DV + E R LI + P++ +R+TG EY+ + L A + + +E+
Sbjct: 103 GYDVWGDGWREARGLIGFAPQDPPMARRMTGAEYITVVGGLLGLSPGVARREARRVLEML 162
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
G + L V+ S G R L +A AL P++ +LDEP SGLD+ + ++++ K
Sbjct: 163 GFEDVLGRVVARLSGGQRRALGIALALASNPEVVVLDEPGSGLDVRARESLWASLRKAFK 222
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G T L SSH+ E E DRV ++H+GR+ G PREL +RY
Sbjct: 223 -GRTVLFSSHDPQEAEAESDRVLIMHRGRLAAWGKPRELIQRY 264
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 138 bits (343), Expect = 8e-32
Identities = 82/224 (36%), Positives = 126/224 (55%), Gaps = 6/224 (2%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
+ ++ K Y + A+ S + GE GLIGPNGAGK+T +K++ +L PT G + G
Sbjct: 5 IKSVTKKYKEKTAVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNILDPTRGDILLNG- 63
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
K SE+++ I YLP+ Y+ +T E L FM +L +K K + + GL
Sbjct: 64 ---KRISEMKREIGYLPQYPDFYQWMTASETLLFMGQLSGISKKKLTKSIPEILSKVGLR 120
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGV 188
N KVST+S GM +RL +A+AL+ KP ++DEP S LD + E+ I+E K+
Sbjct: 121 GEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALDPIGRREVLNIIEEIKKDS- 179
Query: 189 TFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAEN 232
T L+S+H + + E +C+R+ +I G +E T EL R N++N
Sbjct: 180 TILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNR-NSKN 222
>dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 299
Score = 138 bits (343), Expect = 8e-32
Identities = 70/228 (30%), Positives = 127/228 (55%), Gaps = 3/228 (1%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
++ + + K +G A+ + + +GE+FG++G NGAGK+TT +++ LL PT G
Sbjct: 2 SLTIDGVTKKFGTFTAVNNLHVSVPKGEMFGMLGANGAGKTTTFRMILGLLEPTEGTIHW 61
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
+ + I YLPEE G Y +LT + L+++ +L ++ +K +K+ +E
Sbjct: 62 REQPLTYNQTNC---IGYLPEERGLYPKLTVKDQLKYLGRLKGMKTQDIQKEMKMWLERF 118
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
+ E + +V SKG +++ +++ +P+L ILDEP SGLD +N +++ + + K
Sbjct: 119 EVPEYEHKRVEQLSKGNQQKIQFIASVLHRPELLILDEPFSGLDPVNVELLKKAVIDLKK 178
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
EG T L SSH M VE LC + ++H+G + G + +K + +N+
Sbjct: 179 EGTTILFSSHRMEHVEELCQHLCILHRGSPVVEGNLKNIKRSFGKKNV 226
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 136 bits (340), Expect = 2e-31
Identities = 75/227 (33%), Positives = 130/227 (57%), Gaps = 8/227 (3%)
Query: 9 VSNLEKDYGK-------VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
+ L K Y K V A++ +S +E+G I G +G NG GKSTT+ +L LL PT G
Sbjct: 381 ICGLSKSYTKLFRPKKTVHAVKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAG 440
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
A V+GH V+ + VR++ S +P+ + +T E+L+ ++L +++ E ++
Sbjct: 441 DALVYGHSVISNIAAVRRITSVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKV 500
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
++ L + N+ +STYS GM RRL +A A + PK+ +DEPT+G+D + + +K
Sbjct: 501 LDQVRLSKISNNLISTYSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVK 560
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ V +++SH+M EVE L D++ ++++G + G +LK +Y
Sbjct: 561 SIKNDKV-IILTSHDMHEVEILADKIVIMNEGVMACNGNSLQLKSKY 606
>sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >gi|95000|pir||S13584
nosF protein - Pseudomonas stutzeri
>gi|45849|emb|CAA37716.1| (X53676) ATP-binding protein,
peripheral [Pseudomonas stutzeri]
Length = 308
Score = 136 bits (338), Expect = 3e-31
Identities = 77/222 (34%), Positives = 127/222 (56%), Gaps = 6/222 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ AV + + + YG + L ++ + EGE+ GL G NGAGK+T++K++ LL P+ G+
Sbjct: 1 MNAVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLSPSEGQV 60
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+V G +VR+ + YLPE Y +L+G E L A+L + +++L E
Sbjct: 61 KVLGR--APNDPQVRRQLGYLPENVTFYPQLSGRETLRHFARLKGAALTQVDELL----E 114
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
GL + +V TYSKGM +RL LA+AL+ +P+L +LDEPT GLD + ++ I
Sbjct: 115 QVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLYLLIDRL 174
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+ G + ++ SH + VE +R A++ KG + VG+ +L+
Sbjct: 175 RQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQLR 216
>pir||T35090 probable ABC transport ATP-binding subunit - Streptomyces
coelicolor >gi|5596806|emb|CAB51453.1| (AL096884)
putative ABC transport ATP-binding subunit [Streptomyces
coelicolor A3(2)]
Length = 324
Score = 135 bits (336), Expect = 5e-31
Identities = 78/220 (35%), Positives = 120/220 (54%), Gaps = 11/220 (5%)
Query: 18 KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEV 77
+V+A V+ I GEIFGL+GPNGAGKST ++ L L+ P GG E+ GHD+V+
Sbjct: 25 EVRATDDVTLDIRRGEIFGLLGPNGAGKSTLVRQLTGLMRPDGGSVEILGHDIVRHPERA 84
Query: 78 RKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVST 137
++++YL +E+ A LT E +L + R+A +E GL +
Sbjct: 85 ARILAYLGQESSALDELTVSLAAETTGRLRGLEVRRARAERDAVLEELGLTGLAGRPIKK 144
Query: 138 YSKGMVRRLLLARALMVKPKLAILDEPTSGLD------IMNAFEIRRTIKEFSKEGVTFL 191
S G R A AL+ + L +LDEPT+G+D + +A + RR ++ G T L
Sbjct: 145 LSGGQRRLACFAAALVGERPLLVLDEPTTGMDPVARRAVWSAVDRRR-----AEHGATVL 199
Query: 192 ISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
+ +HN++E E + DRVA++ +GR++ TP LKE+ E
Sbjct: 200 LVTHNVIEAETVLDRVAVLDRGRVIACDTPAGLKEQVAGE 239
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 134 bits (335), Expect = 7e-31
Identities = 84/223 (37%), Positives = 124/223 (54%), Gaps = 9/223 (4%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V++L K YG + GVSF +EEGEIFG++GPNGAGK+TT++ + L P GR V
Sbjct: 16 IEVTDLRKSYGGRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGLRVPDAGRVRVT 75
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAK--DSRKAEKMLKLGIEL 124
G D V + V +++ +++ +LT E LE A Y K D R + L
Sbjct: 76 GLDPVADHRRVAEVLGAQLQQSELQPKLTVREALELYAAFYPKPADWRPLAERL------ 129
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L L+ + + S G +RL +A AL+ P++ +LDE T+GLD E + I++
Sbjct: 130 -DLVPMLDTRFAKLSGGQKQRLFIALALVGDPRVVVLDELTTGLDPRARRETWQLIEDIR 188
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
GVT L+ +H M E + LCDR+A+I +GRI + TP L R
Sbjct: 189 AGGVTVLLVTHFMEEAQRLCDRIAVIDRGRIAALDTPAGLIRR 231
>pir||S47705 hypothetical protein f648 - Escherichia coli
>gi|912462|gb|AAB18461.1| (U00039) No definition line
found [Escherichia coli]
Length = 648
Score = 134 bits (335), Expect = 7e-31
Identities = 83/234 (35%), Positives = 132/234 (55%), Gaps = 2/234 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ +L +G A+ V+F+I GEIFG +G NG GKSTT+K+L LL + G A +
Sbjct: 13 AIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWL 72
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FG V + + R+ + Y+ + Y LT + LE A+L+ + + E
Sbjct: 73 FGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERF 132
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + + G+ +RL LA A++ +P++ ILDEPTSG+D + + + + S+
Sbjct: 133 KLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSR 192
Query: 186 EG-VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
+ VT IS+H M E E CDR++L+H G++L GTP+EL E+ A +LEE F+
Sbjct: 193 QDKVTIFISTHFMNEAE-RCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI 245
>sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YHIH
>gi|7430321|pir||A65146 probable ABC transporter yhiH -
Escherichia coli >gi|2367231|gb|AAC76511.1| (AE000424)
putative ATP-binding component of a transport system,
fragment 1 [Escherichia coli K12]
Length = 894
Score = 134 bits (335), Expect = 7e-31
Identities = 83/234 (35%), Positives = 132/234 (55%), Gaps = 2/234 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ +L +G A+ V+F+I GEIFG +G NG GKSTT+K+L LL + G A +
Sbjct: 259 AIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWL 318
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FG V + + R+ + Y+ + Y LT + LE A+L+ + + E
Sbjct: 319 FGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERF 378
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + + G+ +RL LA A++ +P++ ILDEPTSG+D + + + + S+
Sbjct: 379 KLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSR 438
Query: 186 EG-VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
+ VT IS+H M E E CDR++L+H G++L GTP+EL E+ A +LEE F+
Sbjct: 439 QDKVTIFISTHFMNEAE-RCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI 491
Score = 95.6 bits (234), Expect = 5e-19
Identities = 67/233 (28%), Positives = 118/233 (49%), Gaps = 7/233 (3%)
Query: 12 LEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV- 70
+ + YGK AL ++ I + GLIGP+G GKS+ L +++ G V G D+
Sbjct: 1 MSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMR 60
Query: 71 -VKEASEVRKLISYLPEEAGA--YKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGL 127
K +V I+++P+ G Y L+ E ++F A+L+ D + E + + +GL
Sbjct: 61 DPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGL 120
Query: 128 GERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF--SK 185
+ S GM ++L L AL+ P+L ILDEPT+G+D ++ + I +
Sbjct: 121 APFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQ 180
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
++ L+++ M E E D + ++ G +L G+ EL+++ + LEE F+
Sbjct: 181 SNMSVLVATAYMEEAERF-DWLVAMNAGEVLATGSAEELRQQTQSATLEEAFI 232
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 134 bits (335), Expect = 7e-31
Identities = 83/220 (37%), Positives = 121/220 (54%), Gaps = 5/220 (2%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ V L K YG+ A+ +SF + G + G GPNGAGK+T LK + L PT GRA V
Sbjct: 12 AIRVEGLTKRYGRATAVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVGLARPTAGRAFV 71
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V + R L ++ E GA+ TG +L +A L R+ ++L EL
Sbjct: 72 RGTPVAALKPDARLLGVHI-EPCGAHPGRTGRAHLRSLAALAGLPRRRVGEVL----ELV 126
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
GL E +V YS GM +RL LA AL+ P++ +LDEP +GLD +R ++E +
Sbjct: 127 GLEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQGIRWLRTLLRERAA 186
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+G T L+SSH + E D V +I++GR++ G R+L+
Sbjct: 187 KGGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDLE 226
>gb|AAF04137.1|AF191033_5 (AF191033) hypothetical ABC transporter [Mycobacterium smegmatis]
Length = 267
Score = 134 bits (335), Expect = 7e-31
Identities = 73/194 (37%), Positives = 117/194 (59%), Gaps = 3/194 (1%)
Query: 34 IFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKR 93
IFG +G NGAGKSTT++I+ +L P GR + G DV+ ++R+ I Y+PEE G Y +
Sbjct: 1 IFGFVGSNGAGKSTTMRIILGVLAPDAGRV-LIGEDVID--LDLRRRIGYMPEERGLYPK 57
Query: 94 LTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALM 153
+ E L F+A+L+ ++ +A + + + G+G R D V+ S G +R+ LA AL+
Sbjct: 58 MKVGEQLTFLARLHGMETAEAAESARRWADRLGVGSRFGDDVADLSLGNQQRVQLAAALV 117
Query: 154 VKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKG 213
P + +LDEP SGLD + + +KE + EG+ + SSH + V+ +CDRV +I +G
Sbjct: 118 HDPDVLVLDEPFSGLDPVAVDVMSDVLKEKAAEGIPVIFSSHQLDLVQRICDRVGIIARG 177
Query: 214 RILEVGTPRELKER 227
+ +GT +L+ R
Sbjct: 178 EMRALGTVEDLRTR 191
>sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|pir||S13590 nodulation
protein nodI - Rhizobium meliloti
>gi|581510|emb|CAA39236.1| (X55705) nodulation gene;
integral membrane protein; homology to Rhizobium
leguminosarum nodI [Mesorhizobium loti]
Length = 339
Score = 134 bits (334), Expect = 9e-31
Identities = 78/232 (33%), Positives = 124/232 (52%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV + + K YG + +SF + GE FGL+GPNGAGKST ++L + P G V
Sbjct: 40 AVDFAGVTKSYGNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGAITV 99
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V A R+ I +P+ + LT E L + + +R++E ++ +E +
Sbjct: 100 LGVPVPARARLARRGIGVVPQFDNLDQELTVRENLLVFGRYFGMSTRQSEAVIPSLLEFA 159
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + N +VS S GM R L +ARAL+ P+L ++DEPT+GLD I ++
Sbjct: 160 RLERKANARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLA 219
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
G T ++++H M E E LCDR+ ++ KGR + G P+ L + + + E++
Sbjct: 220 RGKTIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQALIDEHIGCQVMEIY 271
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 134 bits (334), Expect = 9e-31
Identities = 83/214 (38%), Positives = 117/214 (53%), Gaps = 15/214 (7%)
Query: 19 VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVR 78
+ ALRG+ IE+G IFGL+GPNGAGK+T + IL+T+L PT G + G D K +VR
Sbjct: 21 IVALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIPTKGEVRILGMDAFKNTRKVR 80
Query: 79 KLISY-----LPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLND 133
+ I+ +P Y E L F A Y R+ + EL E N
Sbjct: 81 ERINISSGVRMPWGMKVY------ECLRFYAMCYGITDRRVVDRVISEFELE---EHRNK 131
Query: 134 KVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE-GVTFLI 192
+ S G ++ LARA + P++ LDEPT+ LD A +IR+ I +E VT ++
Sbjct: 132 RFDDLSTGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQMILRIKEEKDVTIVL 191
Query: 193 SSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
++HNM E E LCDR+A I +G+I+ GT ELK+
Sbjct: 192 TTHNMREAEMLCDRIAFIKEGKIVAEGTSEELKK 225
>sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN ECSA
>gi|7445744|pir||F69619 ABC transporter (ATP-binding
protein) ecsA - Bacillus subtilis
>gi|1177253|emb|CAA61074.1| (X87807) putative
ATP-binding protein of ABC-type [Bacillus subtilis]
>gi|2226115|emb|CAA74409.1| (Y14077) Hypothetical
protein [Bacillus subtilis] >gi|2633340|emb|CAB12844.1|
(Z99109) ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 247
Score = 134 bits (333), Expect = 1e-30
Identities = 76/241 (31%), Positives = 131/241 (53%), Gaps = 2/241 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ ++V +L Y + L+ VSF +E +I GLIG NGAGKSTT++ + L+ P G
Sbjct: 1 MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSI 60
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
E+ G ++ R +Y+PE Y+ LT +E+LE A Y EK L ++
Sbjct: 61 ELNGKTFAEDPEGYRSQFTYIPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLK 120
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
+ +RL + +SKGM +++++ A + +P L I+DEP GLD + + + E
Sbjct: 121 EFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDEPFLGLDPLAINALLERMNEA 180
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAEN--LEEVFMEAV 241
K G + L+S+H + E CD ++H G + GT EL+E++ ++ L+++++E
Sbjct: 181 KKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT 240
Query: 242 K 242
K
Sbjct: 241 K 241
>gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans]
Length = 233
Score = 132 bits (328), Expect = 5e-30
Identities = 79/231 (34%), Positives = 132/231 (56%), Gaps = 13/231 (5%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
NL K +GK A+ ++ ++E I+GL+GPNG+GKSTTLK++ +L T G + GHD
Sbjct: 9 NLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHILIDGHDW 68
Query: 71 VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
++ E I L E Y+ LT E L+ + + +++LK+ ++L+ G++
Sbjct: 69 SRKDLEN---IGALIESPPLYENLTARENLKVRTLMLGLPDSRIDEVLKI-VDLTNTGKK 124
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTF 190
+ +S GM +RL +A AL+ P+L ILDEPT+GLD + E+R I+ F +G+T
Sbjct: 125 ---RAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQELRNLIRSFPTQGITV 181
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
+ISSH + E++ D + +I G +G + + E+LE++F + V
Sbjct: 182 IISSHILSEIQMTADHIGIIANG---VLGYQDRI---HQDEDLEKLFTDVV 226
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 131 bits (325), Expect = 1e-29
Identities = 77/222 (34%), Positives = 123/222 (54%), Gaps = 3/222 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V+N+ K YGK+ A ++ +++EGEI L+GPNGAGK+T +K + L PT G V
Sbjct: 4 IEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEIRVL 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G V+K + +P+E Y LT + + +M +L + +K + +E
Sbjct: 64 GKKPTDR--HVKKFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKRGEELLERLD 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + N S G+ RR L+A AL+ PKL ILDEPT+GLD E+ + KE
Sbjct: 122 LRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEILLNMRKE 181
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G + L+++H + E E L D++ + + I+E GTP ++KE++
Sbjct: 182 GQSMLLTTHYLDEAERLADKIYFLSRKIIVE-GTPTQIKEKF 222
>emb|CAB88481.1| (AL353816) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 289
Score = 131 bits (325), Expect = 1e-29
Identities = 83/228 (36%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ V+ S L YG+ +AL VS ++ G + GL+GPNGAGK+T L++LAT + G
Sbjct: 1 MTPTVSASGLSLHYGRTRALDDVSLRLTPG-VTGLLGPNGAGKTTLLRVLATAVPADRGA 59
Query: 63 AEVFGHD--VVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKL-YAKDSRKAEKMLK 119
V GHD + EVR+ + YLP+ G + T E+++++A L D R+ + ++
Sbjct: 60 FTVLGHDPGSSRGRQEVRRRLGYLPQTPGFHPDFTAFEFVDYVAILKELADRRERHREVR 119
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+E LGE ++ S GM +R+ LA AL+ P +LDEPT GLD R
Sbjct: 120 RVLEEVDLGEVRGRRIKKLSGGMRQRVALAAALVGDPGFLVLDEPTVGLDPEQRMRFREL 179
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
I + EG T L+S+H +V LC RV ++ G + GTP EL R
Sbjct: 180 IAG-AGEGRTVLLSTHQTEDVAMLCHRVIVMAAGAVRFDGTPAELTAR 226
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 130 bits (324), Expect = 1e-29
Identities = 79/222 (35%), Positives = 121/222 (53%), Gaps = 3/222 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
++VSN+ K YG + AL VSF + L+GPNGAGK+T +KI+ ++ P+ G +
Sbjct: 4 ISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNVSIN 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G +V + + + + L E+ Y +TG E L F ++ K ++ L+
Sbjct: 64 GFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVSTLTH 123
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ LN K YS+GM +R+ LA AL+ P + ILDEPT GLD EIR I + KE
Sbjct: 124 CRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKMKKE 183
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ ++S+H + E E L D + +I GR++ G P E K+RY
Sbjct: 184 KL-IVLSTHLISEAELLADYIGIIDHGRLMHFG-PVE-KQRY 222
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 130 bits (323), Expect = 2e-29
Identities = 75/217 (34%), Positives = 122/217 (55%), Gaps = 8/217 (3%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ + NL K + + + ++ + +GEI+G +GPNGAGK+T +K+L + P+ G
Sbjct: 1 MTKVITTRNLTKTFQGKEIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNFVKPSAGE 60
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKL--YAKDSRKAEKMLKL 120
E+FG + ++ E+ K I + E Y++L+ E LE + Y K S E + +
Sbjct: 61 IELFGQRLTSQSYEMLKRIGSMIEFPIFYEKLSARENLELHCEYMGYYKPSAIEEALEMV 120
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
++L+G + V +S GM +RL +ARA+ KP+L ILDEP +GLD + EIR+
Sbjct: 121 KLQLTG-----SKAVKDFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLF 175
Query: 181 KEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRIL 216
+ E GVT LISSH + E+E + D V +I G ++
Sbjct: 176 QTLCNEYGVTILISSHILSEIEQIADTVGVIRNGMLV 212
>gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF [Achromobacter
cycloclastes] >gi|4127274|emb|CAA75427.1| (Y15161)
cytoplasmic protein [Achromobacter cycloclastes]
Length = 299
Score = 129 bits (322), Expect = 2e-29
Identities = 78/225 (34%), Positives = 122/225 (53%), Gaps = 6/225 (2%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ + +S L K + V+AL+ VS +E G L+G NGAGKST +KI+ L+ G
Sbjct: 1 MTPTLTISRLTKRFQSVEALKSVSLALEPGRRAALLGHNGAGKSTMMKIVLGLIPFDSGE 60
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
V G A+ R ++YLPE + LTG E L L ++ ++A ++L
Sbjct: 61 VSVCGSAPGSPAA--RTQVAYLPENVAFHPALTGEEQLRHYLALRGENPKQATELLAR-- 116
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
GLG ++ TYSKGM +R+ LA+ L+ +P+L +LDEPTSGLD ++ + +
Sbjct: 117 --VGLGHAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYDLLDG 174
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ EG L+SSH + EVE D + ++ G ++ GT +L+ R
Sbjct: 175 LAAEGTAILLSSHVLTEVEARTDSILILSGGELVAEGTLADLRTR 219
>gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1]
Length = 298
Score = 129 bits (322), Expect = 2e-29
Identities = 79/220 (35%), Positives = 117/220 (52%), Gaps = 8/220 (3%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ + ++ K YG ALRGVS + EGE+F L+GPNGAGK+T ++ L P GGR E
Sbjct: 3 SVLVADDVAKSYGDAAALRGVSLSVSEGEVFALVGPNGAGKTTLVRCLTGTTTPDGGRVE 62
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G + ++A + R + LP+ RLT E + + A LYA DSR + +L E
Sbjct: 63 LLG-EPPQDAQKQR--LGLLPQSFSPPDRLTAAELVGYYAGLYA-DSRAPDAVL----ES 114
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL + S G RR +A AL+ P + LDEPT+G+D + + +
Sbjct: 115 VGLDPDDATRYGDLSGGQRRRACVAAALVNDPDVLFLDEPTTGVDPAGRHALWSVFEGLA 174
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+G T ++++H+M E L DRV L+ G I GTP +L
Sbjct: 175 ADGTTIVLTTHDMAEASALADRVGLLADGDIAATGTPADL 214
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 129 bits (321), Expect = 3e-29
Identities = 82/235 (34%), Positives = 126/235 (52%), Gaps = 10/235 (4%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
++++NL K +G K L ++ I GEI+G +G NGAGKST +KI+ LL G
Sbjct: 6 LSINNLSKSFGNQKVLDHLNMTISPGEIYGFLGVNGAGKSTAMKIILGLLPKDSGEIVAL 65
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + + S++ I L EE Y LTG E L+ + +L + + +K+ +E +G
Sbjct: 66 GRPLPENRSQILPEIGALIEEPAFYPNLTGFENLQLIQEL----ANLPKDNIKVVMEATG 121
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF-SK 185
+ + V YS GM +RL ++ AL+ PK ILDEPT+GLD ++R+ I+ K
Sbjct: 122 IYYAKDKLVRNYSLGMKQRLGISMALIKFPKFLILDEPTNGLDPDGIHQMRQLIRSLPQK 181
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVG-----TPRELKERYNAENLEE 235
+T LISSH + E+E L D V +I G ++ G +E K + NLE+
Sbjct: 182 FNMTILISSHILSEIENLADTVGIIKDGHLIYEGGINQLLNQEQKYQLKVNNLEK 236
>pir||C75310 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6459931|gb|AAF11682.1|AE002048_2
(AE002048) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 258
Score = 129 bits (321), Expect = 3e-29
Identities = 82/231 (35%), Positives = 121/231 (51%), Gaps = 11/231 (4%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + L K YGK + +RGV F++ GEI L GPNGAGK+TT ++ + P GGR +
Sbjct: 21 LTATGLSKTYGKRQVVRGVDFRVSPGEIVALFGPNGAGKTTTFYMVVGFIRPGGGRIALG 80
Query: 67 GHDVVK--EASEVRKLISYLPEEAGAYKRLTG----LEYLEFMAKLYAKDSRKAEKMLKL 120
D+ + R + YLP+E A+++LT L LE+ A+ +A+ +L
Sbjct: 81 SRDLTRLPMHERARLGLGYLPQEPSAFRKLTARDNLLAILEYQKLTRAEQEARADALL-- 138
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
GL N S G RRL LARAL P +LDEP +G+D + EI+R I
Sbjct: 139 --AEFGLTHLANSYAYQLSGGERRRLELARALTTDPDYLLLDEPFTGVDPKSIREIQRLI 196
Query: 181 KEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
+E + G+ I+ HN+ E L DRV L++ G+I GTP + + +A
Sbjct: 197 RELRDRRGIGVFITDHNVRETIALTDRVYLMYDGQIRFDGTPEQFAQDEDA 247
>pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis elegans
>gi|3947655|emb|CAA22142.1| (AL033536) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=319.4, E-value=1.4e-92, N=2~cDNA
EST yk93b1.5 comes from this gene~cDNA EST yk208d6.3
comes from this gene~cDNA EST yk208d6.5 comes from this
gene
Length = 1564
Score = 129 bits (320), Expect = 4e-29
Identities = 74/241 (30%), Positives = 132/241 (54%), Gaps = 8/241 (3%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + + L KD+GK +A+ +S + E FG++G NGAGK+TT I+ L PTGG A
Sbjct: 1248 TVLVIDGLVKDFGKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGGSAT 1307
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ GHD+ + I Y P+ ++++ + L MAKL + K ++++L ++
Sbjct: 1308 IDGHDITETIH-----IGYCPQFDAMLQQISCRQTLRIMAKLQGYPNVK--EVVELVLDC 1360
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
G+ + V S G R++ + ALM + ILDEPT+G+D EI I E
Sbjct: 1361 VGMSDFGYKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMR 1420
Query: 185 KEG-VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKN 243
++ + +++SH+M E E LC R+ ++ KG ++ +GT + LK +Y + + + ++++
Sbjct: 1421 EQAKCSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTLILNSLED 1480
Query: 244 V 244
+
Sbjct: 1481 L 1481
Score = 99.1 bits (243), Expect = 4e-20
Identities = 71/244 (29%), Positives = 122/244 (49%), Gaps = 11/244 (4%)
Query: 4 VTAVAVSNLEKDYGK-VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ + +S L K Y KA+ G+S + G++ L+G NG GKSTT ++ + T G+
Sbjct: 448 IADIELSGLVKVYQNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGK 507
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKD-----SRKAEKM 117
+ G D +E R+LI Y P+ Y LT E+L + L + AE +
Sbjct: 508 VMIGGIDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESL 567
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
LK IEL+ ++ N S GM R+L + A++ ++ +LDEPT+G+D +++
Sbjct: 568 LK-QIELT---DKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQ 623
Query: 178 RTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
+ K T L+++H M E E L D + ++ G++ G+ LK++Y L +
Sbjct: 624 NML-ALVKADRTILLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLV 682
Query: 238 MEAV 241
++V
Sbjct: 683 FKSV 686
>dbj|BAB10070.1| (AB010069) contains similarity to ABC transporter~gene_id:K11J9.23
[Arabidopsis thaliana]
Length = 917
Score = 129 bits (320), Expect = 4e-29
Identities = 78/234 (33%), Positives = 129/234 (54%), Gaps = 15/234 (6%)
Query: 6 AVAVSNLEKDYG------KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPT 59
A+ NL+K Y A+RG+ + GE FG++GPNGAGK++ + ++ LL P+
Sbjct: 594 AILCDNLKKVYPGRDGNPPKMAVRGLYLSVSSGECFGMLGPNGAGKTSFISMMTGLLKPS 653
Query: 60 GGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKL---YAKDSRKA-- 114
G A V G D+ K+ ++V + P+ ++ LTG E+L F +L D +A
Sbjct: 654 SGTALVQGLDICKDMNKVYTSMGVCPQHDLLWETLTGREHLLFYGRLKNIKGSDLTQAVE 713
Query: 115 EKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAF 174
E + + + G+G++ YS GM RRL +A +L+ PK+ LDEP++GLD +
Sbjct: 714 ESLKSVSLYDGGVGDK---PAGNYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRK 770
Query: 175 EIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ IK +K+ ++++H+M E E+LCDR+ + G + +G +ELK RY
Sbjct: 771 NLWNVIKR-AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNSKELKSRY 823
>gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania tropica]
Length = 1843
Score = 129 bits (320), Expect = 4e-29
Identities = 79/224 (35%), Positives = 128/224 (56%), Gaps = 4/224 (1%)
Query: 7 VAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
V V NL K+Y GKV A+R ++ + GE+FG +G NGAGK+TT+ IL +PT GRA
Sbjct: 1505 VRVLNLRKEYPNGKV-AVRNIALGVRPGEVFGFLGTNGAGKTTTISILCQEFYPTSGRAY 1563
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G+D+V E+SE + I Y P+ LT E+L A + SR +++++ ++L
Sbjct: 1564 VCGNDIVTESSEALRCIGYCPQFDACLDLLTVEEHLYLYAGVRGISSRACDRVVRGLMKL 1623
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL E K S G R+L +A +L+ P++ DEP++G+D + + I E
Sbjct: 1624 CGLTEYRRTKSHELSGGNRRKLSVAVSLIGGPRVVFFDEPSAGMDPVARRGLWNAI-ETV 1682
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ + ++++H++ EVE L RVA++ G + +G LK++Y
Sbjct: 1683 ADNCSVVLTTHHLEEVEALAHRVAIMVDGTLRCIGDKTHLKQKY 1726
Score = 108 bits (266), Expect = 9e-23
Identities = 74/226 (32%), Positives = 119/226 (51%), Gaps = 5/226 (2%)
Query: 6 AVAVSNLEKDY---GKV-KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
AV + L K + GK A+ + + + EGEI L+G NGAGKSTT+ ++ +L GG
Sbjct: 717 AVRIRGLRKTFRRGGKAFAAVDDLCWSLNEGEISVLLGHNGAGKSTTMNLMTGMLEADGG 776
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V+GH V E S VR+ I P+ + +LT E+L++ A + + E ++
Sbjct: 777 DCYVYGHSVRHELSAVRQEIGLCPQHNILWPQLTVREHLDYYAAIKGLRGSEKEDAIRRL 836
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+ L ++ + S G R+L +A A + +L ILDEPT+G+D+ +K
Sbjct: 837 LAAVDLEDKEHYMSKALSGGQKRKLSVAVAFVGGSRLVILDEPTAGMDVGARRHTWSLLK 896
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
E +K T L+++H M E + L D VA++ KGR+ G+ LK +
Sbjct: 897 EMAK-WHTILLTTHFMDEADLLGDTVAIMSKGRLQCAGSNMFLKSK 941
>pir||B70394 ABC transporter - Aquifex aeolicus >gi|2983576|gb|AAC07148.1|
(AE000723) ABC transporter [Aquifex aeolicus]
Length = 396
Score = 128 bits (319), Expect = 5e-29
Identities = 72/207 (34%), Positives = 114/207 (54%), Gaps = 11/207 (5%)
Query: 22 LRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLI 81
L+G++ +IE+GE+ G++GPNGAGKST LK++ + P G E G K++
Sbjct: 38 LKGINLEIEKGEVLGIVGPNGAGKSTLLKVITGVTEPDKGFVERSG-----------KVV 86
Query: 82 SYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKG 141
L G L+GLE + A L R+ ++ L+ IE S L + +N + TYS G
Sbjct: 87 GLLELGTGFNYELSGLENIYVNASLLGLSRREIDEKLESIIEFSELDDFINKPLKTYSSG 146
Query: 142 MVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVE 201
M+ RL + A+ +P+ I+DE + D + R +KE ++G + + SH+M V+
Sbjct: 147 MIMRLAFSIAIHTEPECFIIDEALAVGDAHFQQKCFRKLKEHKQKGGSIIFVSHDMNAVK 206
Query: 202 YLCDRVALIHKGRILEVGTPRELKERY 228
LCDR L+HKG I+E G+P + + Y
Sbjct: 207 ILCDRAILLHKGEIIEEGSPETVTQAY 233
>pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elegans
>gi|3877692|emb|CAB05222.1| (Z82272) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=329.9, E-value=9.1e-96, N=2
[Caenorhabditis elegans]
Length = 1431
Score = 128 bits (319), Expect = 5e-29
Identities = 73/223 (32%), Positives = 123/223 (54%), Gaps = 8/223 (3%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ ++ L KD+GK +A+ G+S ++ E FG++G NGAGK+TT I+ L PTGGR +
Sbjct: 1129 LVINGLIKDFGKFRAVNGLSVTVDHEECFGMLGANGAGKTTTFDIITGLTMPTGGRVTID 1188
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
GHD+ + I Y P+ ++++ E L MAK + +++ L ++ G
Sbjct: 1189 GHDISRTIH-----IGYCPQFDAMLQQISCRETLMIMAKF--QGYANVSEVVDLVLDCVG 1241
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ + N V S G R++ + ALM + ILDEPT+G+D EI I E ++
Sbjct: 1242 MADFGNKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQ 1301
Query: 187 G-VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ +++SH+M E E LC R+ ++ G ++ +GT + LK +Y
Sbjct: 1302 AKCSIVLTSHSMEECEALCTRIGILRNGEMIALGTSQSLKSQY 1344
Score = 101 bits (248), Expect = 1e-20
Identities = 71/234 (30%), Positives = 120/234 (50%), Gaps = 14/234 (5%)
Query: 4 VTAVAVSNLEKDYGK-VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
V + +S L K Y KA+ G+S + G++ L+G NG GKSTT ++ + T GR
Sbjct: 444 VADIELSGLVKVYTNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHKATEGR 503
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
+ G D + RK+I Y P+ Y +LT +E+L+ + L K L +
Sbjct: 504 VIIGGIDANSHRAAARKMIGYCPQYNPLYDKLTVMEHLKLVNAL------KGGSKLTFKV 557
Query: 123 ELSGLGER--LNDKVSTYSK----GMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEI 176
E L ++ L DK T +K GM R+L + A++ ++ +LDEPT+G+D ++
Sbjct: 558 EADSLLQQIELTDKRDTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDV 617
Query: 177 RRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
+R + K T L+++H M E E L D + ++ G++ G+ LK++Y +
Sbjct: 618 QRML-ALVKADRTILLTTHYMDEAEKLGDWIFVMSHGKMAASGSNHYLKQKYGS 670
>pir||T07717 probable ABC-type transport protein T23J7.110 - Arabidopsis
thaliana >gi|4741195|emb|CAB41861.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 900
Score = 128 bits (319), Expect = 5e-29
Identities = 80/234 (34%), Positives = 130/234 (55%), Gaps = 15/234 (6%)
Query: 6 AVAVSNLEKDYG------KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPT 59
A+ NL+K Y A+RG+S + GE FG++GPNGAGK++ + ++ LL PT
Sbjct: 577 AIVCDNLKKVYPGRDGNPPKLAVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLLKPT 636
Query: 60 GGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLY----AKDSRKAE 115
G A V G D+ + V + P+ ++ LTG E+L F +L A ++ E
Sbjct: 637 SGTALVQGLDICNDMDRVYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGADLNQAVE 696
Query: 116 KMLK-LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAF 174
+ LK + + G+ ++ K YS GM RRL +A +L+ PK+ +DEP++GLD +
Sbjct: 697 ESLKSVNLFHGGVADKPAGK---YSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRK 753
Query: 175 EIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ IK +K+ ++++H+M E E+LCDR+ + G + +G P+ELK RY
Sbjct: 754 NLWTVIKR-AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNPKELKGRY 806
>sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683|pir||S27496 nodI
protein - Bradyrhizobium japonicum
>gi|152117|gb|AAA26229.1| (J03685) nodI gene product
[Bradyrhizobium japonicum]
Length = 306
Score = 128 bits (318), Expect = 7e-29
Identities = 74/232 (31%), Positives = 118/232 (49%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + + K +G + +SF + GE FGL+GPNGAGKST ++L ++ P G+ V
Sbjct: 7 AIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITV 66
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
V A R + +P+ T E L + + +R E ++ +E +
Sbjct: 67 LDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFA 126
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + +VS S GM RRL LARAL+ P L ++DEPT+GLD I ++
Sbjct: 127 RLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLA 186
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
G T L+++H M E E LCDR+ ++ G + G P L + + N+ E++
Sbjct: 187 RGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCNVIEIY 238
>prf||1914270A nodulation protein [Bradyrhizobium japonicum]
Length = 306
Score = 128 bits (318), Expect = 7e-29
Identities = 74/232 (31%), Positives = 118/232 (49%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + + K +G + +SF + GE FGL+GPNGAGKST ++L ++ P G+ V
Sbjct: 7 AIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITV 66
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
V A R + +P+ T E L + + +R E ++ +E +
Sbjct: 67 LDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFA 126
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + +VS S GM RRL LARAL+ P L ++DEPT+GLD I ++
Sbjct: 127 RLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLA 186
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
G T L+++H M E E LCDR+ ++ G + G P L + + N+ E++
Sbjct: 187 RGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCNVIEIY 238
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 128 bits (318), Expect = 7e-29
Identities = 79/240 (32%), Positives = 134/240 (54%), Gaps = 7/240 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+T + + +L K +GK+ LRG+ ++++GE+ +IGP+G+GKST L+ + L G+
Sbjct: 1 MTVLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKI 60
Query: 64 EVFGHDVV-KEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRK---AEKMLK 119
G + + + +R I + ++ + L+ L L +A + K+ +K EK K
Sbjct: 61 YFKGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLT-LAPMKVKNMQKDEAVEKAKK 119
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
L +E GL E++N+K S G +R+ +ARALM+ P+L + DEPTS LD E+
Sbjct: 120 L-LERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLDV 178
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
IK+ ++ G+T LI +H M + DRV + +GRI+E+G P ++ E E F+E
Sbjct: 179 IKDLAQSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKIFSNPENERTRE-FLE 237
>sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082239|pir||B54774 ATP
binding cassette transporter ABC2 - mouse (fragment)
>gi|495259|emb|CAA53531.1| (X75927) abc2 [Mus musculus]
Length = 1472
Score = 127 bits (317), Expect = 9e-29
Identities = 83/228 (36%), Positives = 121/228 (52%), Gaps = 3/228 (1%)
Query: 3 LVTAVAVSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V V L K Y K AL +S + E ++ +G NGAGK+TT+ IL L PT
Sbjct: 23 LPLVVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTS 82
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A ++GHD+ E E+RK + P+ + RLT E+L F ++L + + K
Sbjct: 83 GSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDK 142
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
IE L + + V T S GM R+L +A A + + ILDEPT+G+D I I
Sbjct: 143 MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI 202
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
++ K G T L+S+H+M E + L DR+A+I G++ G+P LK Y
Sbjct: 203 LKY-KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAY 249
Score = 118 bits (294), Expect = 4e-26
Identities = 79/244 (32%), Positives = 129/244 (52%), Gaps = 6/244 (2%)
Query: 7 VAVSNLEKDY-----GKVKALRGVSFQI-EEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
V + NL K Y G++ A+ + + GE FGL+G NGAGK++T K+L TG
Sbjct: 1088 VKIENLTKVYKSRKIGRILAVDRLCLGVCVPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1147
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A V GH V+K+ +V++ + Y P+ LT E+L+ +L + +++K
Sbjct: 1148 GEAFVNGHSVLKDLLQVQQSLGYCPQFDVPVDELTAREHLQLYTRLRCIPWKDEAQVVKW 1207
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
+E L + + TYS G R+L A AL+ P LDEPT+G+D + I
Sbjct: 1208 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 1267
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA 240
+ K G + +++SH+M E E LC R+A++ GR+ +G+ + LK R+ + V ++
Sbjct: 1268 LDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLHCLGSIQHLKNRFGDGYMITVRTKS 1327
Query: 241 VKNV 244
+NV
Sbjct: 1328 SQNV 1331
>sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|2182424|gb|AAB91694.1|
(AE000076) NodI [Rhizobium sp. NGR234]
Length = 343
Score = 127 bits (317), Expect = 9e-29
Identities = 78/232 (33%), Positives = 120/232 (51%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ ++N+ K YG + +SF I GE FGL+GPNGAGKST +++ L P G V
Sbjct: 44 AIELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPDEGTITV 103
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G V A R I +P+ + T E L + + +R+ E+ + ++ +
Sbjct: 104 LGEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGLHTRELEEAIPPLLDFA 163
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + V+ S GM RRL LA AL+ P+L ILDEPT+GLD I ++
Sbjct: 164 RLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA 223
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
G T L+++H M E + LCDR+ +I GR + G P L + ++ E++
Sbjct: 224 LGKTILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHALIDEQIGCDVIEIY 275
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 127 bits (317), Expect = 9e-29
Identities = 77/227 (33%), Positives = 123/227 (53%), Gaps = 5/227 (2%)
Query: 7 VAVSNLEKDY-----GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V + NL K Y G++ A+ + + GE FGL+G NGAGK++T K+L TGG
Sbjct: 1144 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGG 1203
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
A V GH V+KE +V++ + Y P+ + LT E+L+ +L + +++K
Sbjct: 1204 EAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWA 1263
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E L + + TYS G R+L A AL+ P LDEPT+G+D + I
Sbjct: 1264 LEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLIL 1323
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ K G + +++SH+M E E LC R+A++ GR+ +G+ + LK R+
Sbjct: 1324 DLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRF 1370
Score = 127 bits (317), Expect = 9e-29
Identities = 82/228 (35%), Positives = 122/228 (52%), Gaps = 3/228 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V V L K Y K AL +S + E ++ +G NGAGK+TT+ IL L PT
Sbjct: 80 LPLVVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTS 139
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A ++GHD+ E E+RK + P+ + RLT E+L F ++L + + + +
Sbjct: 140 GSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDK 199
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
IE L + + V T S GM R+L +A A + + ILDEPT+G+D I I
Sbjct: 200 MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI 259
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
++ K G T L+S+H+M E + L DR+A+I G++ G+P LK Y
Sbjct: 260 LKY-KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTY 306
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 127 bits (317), Expect = 9e-29
Identities = 77/227 (33%), Positives = 123/227 (53%), Gaps = 5/227 (2%)
Query: 7 VAVSNLEKDY-----GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V + NL K Y G++ A+ + + GE FGL+G NGAGK++T K+L TGG
Sbjct: 2051 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGG 2110
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
A V GH V+KE +V++ + Y P+ + LT E+L+ +L + +++K
Sbjct: 2111 EAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWA 2170
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E L + + TYS G R+L A AL+ P LDEPT+G+D + I
Sbjct: 2171 LEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLIL 2230
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ K G + +++SH+M E E LC R+A++ GR+ +G+ + LK R+
Sbjct: 2231 DLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRF 2277
Score = 127 bits (317), Expect = 9e-29
Identities = 82/228 (35%), Positives = 122/228 (52%), Gaps = 3/228 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V V L K Y K AL +S + E ++ +G NGAGK+TT+ IL L PT
Sbjct: 987 LPLVVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTS 1046
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A ++GHD+ E E+RK + P+ + RLT E+L F ++L + + + +
Sbjct: 1047 GSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDK 1106
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
IE L + + V T S GM R+L +A A + + ILDEPT+G+D I I
Sbjct: 1107 MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI 1166
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
++ K G T L+S+H+M E + L DR+A+I G++ G+P LK Y
Sbjct: 1167 LKY-KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTY 1213
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 127 bits (316), Expect = 1e-28
Identities = 82/228 (35%), Positives = 122/228 (52%), Gaps = 3/228 (1%)
Query: 3 LVTAVAVSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V V L K Y K AL +S + E ++ +G NGAGK+TT+ IL L PT
Sbjct: 986 LPLVVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTS 1045
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A ++GHD+ E E+RK + P+ + +LT E+L F ++L + + K +
Sbjct: 1046 GSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDK 1105
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
IE L + + V T S GM R+L +A A + + ILDEPT+G+D I I
Sbjct: 1106 MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI 1165
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
++ K G T L+S+H+M E + L DR+A+I G++ G+P LK Y
Sbjct: 1166 LKY-KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAY 1212
Score = 123 bits (305), Expect = 2e-27
Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 5/243 (2%)
Query: 7 VAVSNLEKDY-----GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V + NL K Y G++ A+ + + GE FGL+G NGAGK++T K+L TGG
Sbjct: 2051 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGG 2110
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
A V GH V+K+ +V++ + Y P+ + LT E+L+ +L + ++++
Sbjct: 2111 EAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRWA 2170
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E L + + +YS G R+L A AL+ P LDEPT+G+D + I
Sbjct: 2171 LEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLIL 2230
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
+ K G + +++SH+M E E +C R+A++ GR+ +G+ + LK R+ + V ++
Sbjct: 2231 DLIKTGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSS 2290
Query: 242 KNV 244
+NV
Sbjct: 2291 QNV 2293
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 127 bits (315), Expect = 2e-28
Identities = 74/226 (32%), Positives = 130/226 (56%), Gaps = 3/226 (1%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
V ++ KDY + K LR +SF + EGE F ++GP+G+GK+ L+I+A ++ P GR + G
Sbjct: 4 VESISKDYREFK-LREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRILLRGE 62
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
D+ E R SY+P+ + +T + + F KL ++ + ++ E G+
Sbjct: 63 DITGLPPEKRNF-SYIPQNYALFPHMTVFDNIAFGLKLRKIPRKEVARKVREVAESLGID 121
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE-G 187
L+ K T S G +R+ +ARAL+VKP+L ++DEP + LD+ ++ R +K + KE G
Sbjct: 122 HLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIREMKRWRKEFG 181
Query: 188 VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
T + +H+ E L DRV ++ +GR+++VG R++ + +E +
Sbjct: 182 FTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEV 227
>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 127 bits (315), Expect = 2e-28
Identities = 86/239 (35%), Positives = 127/239 (52%), Gaps = 21/239 (8%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
V +L+K YG+ A+ G+SF++E+GEIF ++GPNGAGK+TTLK + L G E+ G
Sbjct: 6 VKDLKKFYGEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRKKDSGEIELNG- 64
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
+YLPEE Y L E ++ K+ + K L+L L
Sbjct: 65 -----------TFTYLPEEKKLYPYLRVKEIIDLFKKIGKNFNEK--NCLEL---LERFR 108
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGV 188
LN+KV+ S GM L L+ L L ILDEPT GLD + EI I+ + EG
Sbjct: 109 IDLNEKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDPIVRNEILDRIRSLTFEGK 168
Query: 189 TFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY----NAENLEEVFMEAVKN 243
+ L +SH + EVE + DRVA++ +G+I+ G ++K Y + ENL ++ +K+
Sbjct: 169 SVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDDIKSSYGLVVSRENLNGYLLKTLKS 227
>pir||G75548 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457873|gb|AAF09790.1|AE001882_8
(AE001882) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 354
Score = 127 bits (315), Expect = 2e-28
Identities = 88/238 (36%), Positives = 127/238 (52%), Gaps = 4/238 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K + + A++ +SF I GEI G +GPNGAGKSTT+K+L LL P G V
Sbjct: 47 IEVRHLCKSFARKPAVQDISFSIPAGEIVGYLGPNGAGKSTTIKVLTGLLVPDSGEVRVG 106
Query: 67 GHDVVKEASE-VRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G K+ + V +L + + + L E LE + +Y + + + L EL
Sbjct: 107 GLVPWKQRRQHVARLGAVFGQRTTLWWDLPVRESLELLRHVYRVPAARFAENLAGFTELL 166
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
LG LN S G R LA AL+ P+L LDEPT GLD++ IR +K +
Sbjct: 167 ELGPFLNTPARALSLGQRMRADLAAALLHDPELLFLDEPTVGLDVVAKERIREFVKAVNA 226
Query: 186 E-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
E GVT L+++H++ +VE L RV +I GR+L G EL+ RY E E+++E K
Sbjct: 227 ERGVTVLLTTHDLGDVERLARRVMMIDTGRLLFDGPLAELQARYGGE--RELWVEFEK 282
>pir||S71363 probable ATP-binding cassette transporter ABC-3 - human
>gi|1514530|emb|CAA65825.1| (X97187) ABC-C transporter
[Homo sapiens]
Length = 1704
Score = 126 bits (314), Expect = 2e-28
Identities = 76/232 (32%), Positives = 130/232 (55%), Gaps = 5/232 (2%)
Query: 3 LVTAVAVSNLEKDYGKVK----ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP 58
LV + + +L K + A+R ++ + EG+I L+G NGAGK+TTL +L L P
Sbjct: 526 LVAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPP 585
Query: 59 TGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
T GRA + G+++ ++ ++RK + P+ + LT E+L F A+L +K + +
Sbjct: 586 TSGRAYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEV 645
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
K + + GL ++ N + S GM R+L + AL+ K+ ILDEPTSG+D ++ I
Sbjct: 646 KQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWD 705
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
++ K T ++++H M E + L DR+A++ KG + G+ LK++Y A
Sbjct: 706 LLQR-QKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGA 756
Score = 118 bits (294), Expect = 4e-26
Identities = 75/232 (32%), Positives = 123/232 (52%), Gaps = 3/232 (1%)
Query: 2 VLVTAVAVSNLEKDYGK---VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP 58
+L T + + L K Y + + A+ +S +++GE FGL+G NGAGK+TT K+L
Sbjct: 1376 LLHTPLIIKELSKVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESL 1435
Query: 59 TGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
T G A V GH + + +VR+ I Y P+ +TG E L A+L R +
Sbjct: 1436 TSGDAFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACV 1495
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
+ + L N V TYS G R+L AL+ +P + LDEP++G+D + +
Sbjct: 1496 ENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWD 1555
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
T+ + G +I+SH+M E E LC R+A++ +G+ +G+P+ LK ++ +
Sbjct: 1556 TVARARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGS 1607
>gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-binding cassette
3; ABC transporter 3 [Homo sapiens]
>gi|7387524|sp|Q99758|ABC3_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 3 (ATP-BINDING CASSETTE TRANSPORTER
3) (ATP-BINDING CASSETTE 3) (ABC-C TRANSPORTER)
>gi|11278926|pir||A59188 ATP-binding cassette
transporter ABC3 - human >gi|1699038|gb|AAC50967.1|
(U78735) ABC3 [Homo sapiens]
Length = 1704
Score = 126 bits (314), Expect = 2e-28
Identities = 76/232 (32%), Positives = 130/232 (55%), Gaps = 5/232 (2%)
Query: 3 LVTAVAVSNLEKDYGKVK----ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP 58
LV + + +L K + A+R ++ + EG+I L+G NGAGK+TTL +L L P
Sbjct: 526 LVAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPP 585
Query: 59 TGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
T GRA + G+++ ++ ++RK + P+ + LT E+L F A+L +K + +
Sbjct: 586 TSGRAYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEV 645
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
K + + GL ++ N + S GM R+L + AL+ K+ ILDEPTSG+D ++ I
Sbjct: 646 KQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWD 705
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
++ K T ++++H M E + L DR+A++ KG + G+ LK++Y A
Sbjct: 706 LLQR-QKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGA 756
Score = 118 bits (294), Expect = 4e-26
Identities = 75/232 (32%), Positives = 123/232 (52%), Gaps = 3/232 (1%)
Query: 2 VLVTAVAVSNLEKDYGK---VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP 58
+L T + + L K Y + + A+ +S +++GE FGL+G NGAGK+TT K+L
Sbjct: 1376 LLHTPLIIKELSKVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESL 1435
Query: 59 TGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
T G A V GH + + +VR+ I Y P+ +TG E L A+L R +
Sbjct: 1436 TSGDAFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACV 1495
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
+ + L N V TYS G R+L AL+ +P + LDEP++G+D + +
Sbjct: 1496 ENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWD 1555
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
T+ + G +I+SH+M E E LC R+A++ +G+ +G+P+ LK ++ +
Sbjct: 1556 TVARARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGS 1607
>gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445636|pir||B69392 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649450|gb|AAB90106.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 232
Score = 126 bits (314), Expect = 2e-28
Identities = 78/224 (34%), Positives = 127/224 (55%), Gaps = 11/224 (4%)
Query: 22 LRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLI 81
L VSF + E EI GL+GPNG+GKST +KI+A ++ P G V G V + +V++L+
Sbjct: 2 LSEVSF-VAENEILGLLGPNGSGKSTLMKIIAGVIPPDEGDVIVNGVSVAENPLKVKELV 60
Query: 82 SYLPEEAGAYKRLTGLEYLEFMAKLYAKDS---RKAEKMLKLGIELSGLGERLNDKVSTY 138
++PE Y+ LT E F+ + +S ++ + L +E + + E +
Sbjct: 61 GFVPETPVLYESLTASELFSFVGAVRKIESSLLKERVERLAEALEFTAMDELF----ANL 116
Query: 139 SKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNML 198
S G +++ + A++ P + ILDE +GLD+ +A R I +F +EG ++S+H M
Sbjct: 117 SLGNRQKVSIIAAMLHNPSVLILDEAFNGLDVASAKVFRDLIFQFREEGREVILSTHIMP 176
Query: 199 EVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
E +CDR+ +I GRI+ GTP ELK+ E+LE+VF++ K
Sbjct: 177 IAERICDRILIIQNGRIIAQGTPDELKK---DEDLEDVFLKLTK 217
>dbj|BAB10074.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.5
[Arabidopsis thaliana]
Length = 907
Score = 126 bits (314), Expect = 2e-28
Identities = 78/233 (33%), Positives = 129/233 (54%), Gaps = 13/233 (5%)
Query: 6 AVAVSNLEKDYGKVK------ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPT 59
A+ NL+K Y A+RG+ + GE FG++GPNGAGK++ + ++ LL PT
Sbjct: 584 AIVCDNLKKVYPGSDGNPPKLAVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPT 643
Query: 60 GGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLK 119
G A V G D+ K+ ++V + P+ + LTG E+L F +L K+ + + M
Sbjct: 644 SGTALVQGLDICKDMNKVYTSMGVCPQHDLLWGTLTGREHLLFYGRL--KNIKGSALMQA 701
Query: 120 LGIELSGL----GERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFE 175
+ L + G + YS GM RRL +A +L+ PK+ +DEP++GLD + +
Sbjct: 702 VEESLKSVSLFDGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKD 761
Query: 176 IRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
+ T+ + +K+ ++++H+M E E+LCDR+ + G + VG P+ELK RY
Sbjct: 762 L-WTVIQRAKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCVGNPKELKGRY 813
>gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sapiens]
Length = 1704
Score = 126 bits (314), Expect = 2e-28
Identities = 76/232 (32%), Positives = 130/232 (55%), Gaps = 5/232 (2%)
Query: 3 LVTAVAVSNLEKDYGKVK----ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP 58
LV + + +L K + A+R ++ + EG+I L+G NGAGK+TTL +L L P
Sbjct: 526 LVAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPP 585
Query: 59 TGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
T GRA + G+++ ++ ++RK + P+ + LT E+L F A+L +K + +
Sbjct: 586 TSGRAYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEV 645
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
K + + GL ++ N + S GM R+L + AL+ K+ ILDEPTSG+D ++ I
Sbjct: 646 KQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWD 705
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
++ K T ++++H M E + L DR+A++ KG + G+ LK++Y A
Sbjct: 706 LLQR-QKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGA 756
Score = 118 bits (294), Expect = 4e-26
Identities = 75/232 (32%), Positives = 123/232 (52%), Gaps = 3/232 (1%)
Query: 2 VLVTAVAVSNLEKDYGK---VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP 58
+L T + + L K Y + + A+ +S +++GE FGL+G NGAGK+TT K+L
Sbjct: 1376 LLHTPLIIKELSKVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESL 1435
Query: 59 TGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
T G A V GH + + +VR+ I Y P+ +TG E L A+L R +
Sbjct: 1436 TSGDAFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACV 1495
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
+ + L N V TYS G R+L AL+ +P + LDEP++G+D + +
Sbjct: 1496 ENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWD 1555
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
T+ + G +I+SH+M E E LC R+A++ +G+ +G+P+ LK ++ +
Sbjct: 1556 TVARARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGS 1607
>pir||C81208 ABC transporter, ATP-binding protein NMB0356 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225578|gb|AAF40799.1| (AE002392) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 254
Score = 125 bits (312), Expect = 3e-28
Identities = 66/223 (29%), Positives = 121/223 (53%), Gaps = 2/223 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
V+ + V NL+K + K + ++ S +IE GE+ GL+GPNGAGK+T+ ++ L+ G
Sbjct: 15 VSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAADAGSV 74
Query: 64 EVFGHDV--VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
+ G ++ + R + YLP+EA ++++T + + + ++ KD + ++ ++
Sbjct: 75 TLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEIRTKDKNQIDREIEKL 134
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+ +G + S G RR+ +AR L +KP +LDEP +G+D + +I++ I
Sbjct: 135 LADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIAVIDIQKIIG 194
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
G+ LI+ HN+ E +CDR +I G +L G P +L
Sbjct: 195 FLKSRGIGVLITDHNVRETLSICDRAYIISDGTVLASGKPDDL 237
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 125 bits (311), Expect = 5e-28
Identities = 80/229 (34%), Positives = 126/229 (54%), Gaps = 24/229 (10%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
+SNL +G A++G++ + GEI GL+GPNG+GK+TT++ +FG
Sbjct: 6 ISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIR-------------AIFG- 51
Query: 69 DVVKEASEVRKL---ISYLPEEAGAYKRLTGLEYLEFMAKLYA-KDSRKAEKMLKLGIEL 124
+V E+R + ++P+ + Y L+ E L F A LY +D R+ E+MLKL ++L
Sbjct: 52 -MVPYEGEIRNYATSVGWMPQNSPLYLNLSVEENLRFFASLYGIEDERRVEEMLKL-VQL 109
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
+RL V S GM +R +LA A++ P+L +LDEPT+G+D ++
Sbjct: 110 ERYRKRL---VKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKLR 166
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
+EG T L+++H M E E C+R+ LI G + GTP E+K R + L
Sbjct: 167 EEGKTILVTTHYMDEAE-RCERLVLIRNGSKIAEGTPEEIKRRACGDRL 214
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 125 bits (311), Expect = 5e-28
Identities = 74/230 (32%), Positives = 122/230 (52%), Gaps = 5/230 (2%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
NL+K +G+ + GV+ + GEI GL+GPNGAGK+T ++ ++ PT G+ D+
Sbjct: 8 NLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKIIFRDVDI 67
Query: 71 VKEA--SEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
K R I+YL +E + LT E ++ + + + KD K E+ ++ + L
Sbjct: 68 TKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERKIEELLHEFHLK 127
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGV 188
N S S G R+L LAR + + P +LDEP SG+D EI++ E ++
Sbjct: 128 HLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEIQKMTLELKQKNF 187
Query: 189 TFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
+I+ HN+ E+ + DR+ +I+KG IL G+P + E E + EV++
Sbjct: 188 GIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILE---DETVREVYL 234
>sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|pir||A24400 nodulation
protein nodI - Rhizobium leguminosarum
>gi|46214|emb|CAA68618.1| (Y00548) nodI [Rhizobium
leguminosarum] >gi|225122|prf||1209215A gene nodI
[Rhizobium leguminosarum]
Length = 311
Score = 125 bits (310), Expect = 6e-28
Identities = 75/221 (33%), Positives = 114/221 (50%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ ++ + K YG + +SF I GE FGL+GPNGAGKST +++ + P+ G+ V
Sbjct: 12 AIDLAGVSKSYGGKIVVNDLSFTIAAGECFGLLGPNGAGKSTITRMILGMTSPSVGKITV 71
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G + R I + + T E L + + +R+ E ++ +E +
Sbjct: 72 LGAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIETVIPSLLEFA 131
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + N +V+ S GM RRL LA AL+ P+L ILDEPT+GLD I ++
Sbjct: 132 RLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA 191
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
G T L+++H M E E LCDR+ ++ GR + G P L E
Sbjct: 192 RGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIE 232
>gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphylococcus
epidermidis] >gi|1586615|prf||2204285A epiF gene
[Staphylococcus epidermidis]
Length = 231
Score = 125 bits (310), Expect = 6e-28
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 15/237 (6%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ NL K + K L+ ++ ++ E++GL+G NGAGKST +KI+ +L T G +
Sbjct: 6 IETRNLNKRFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTSGDIYLD 65
Query: 67 GHDVV-KEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G + KE + + LI P Y L+ + L+ +A D + K+L EL
Sbjct: 66 GSPLTRKELTNIGSLIESPP----TYNHLSAQDNLKVVALNENIDFNEISKVL----ELV 117
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L KV +S GM +RL +A AL+ KPKL +LDEP++GLD E+R +K +
Sbjct: 118 NLNVEPQKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRELLKSLTN 177
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
+ +ISSH + E++ L D V +IH G++ +E ENLE+VF K
Sbjct: 178 LNTSVIISSHILSEIQQLADHVGIIHNGKL------EYQEENKTDENLEDVFFNITK 228
>pir||H81784 probable ABC transporter ATP-binding protein NMA2131 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380752|emb|CAB85343.1| (AL162758) putative ABC
transporter ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 254
Score = 125 bits (310), Expect = 6e-28
Identities = 66/223 (29%), Positives = 121/223 (53%), Gaps = 2/223 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
V+ + V NL+K + K + ++ S +IE GE+ GL+GPNGAGK+T+ ++ L+ G
Sbjct: 15 VSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGAGKTTSFYMIVGLIAADAGSV 74
Query: 64 EVFGHDV--VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
+ G ++ + R + YLP+EA ++++T + + + ++ KD + ++ ++
Sbjct: 75 MLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEIRTKDKNQIDREIEKL 134
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+ +G + S G RR+ +AR L +KP +LDEP +G+D + +I++ I
Sbjct: 135 LADLNIGHLRRSPTPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIAVIDIQKIIG 194
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
G+ LI+ HN+ E +CDR +I G +L G P +L
Sbjct: 195 FLKSRGIGVLITDHNVRETLSICDRAYIISDGAVLASGKPDDL 237
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 124 bits (308), Expect = 1e-27
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 12/241 (4%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ + NL K Y K + VS + EI GL+GPNGAGK+TT ++ L+ G+
Sbjct: 1 MSILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKI 60
Query: 64 EVFGHDV--VKEASEVRKLISYLPEEAGAYKRLTGLE----YLEFMAKLYAKDSRKAEKM 117
+ G D+ + + ++ I YLP+EA ++RLT E LE L + R+
Sbjct: 61 VIDGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRREKADE 120
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
L +S + + L +S G RR+ +ARAL PK +LDEP +G+D ++ +I+
Sbjct: 121 LIEEFNISHIRDNLGQALSG---GERRRVEIARALAANPKFILLDEPFAGVDPISVSDIK 177
Query: 178 RTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
+ I + G+ LI+ HN+ E +C+R ++ G+I+ GTP ++ N E ++ V+
Sbjct: 178 KIITDLRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQV---MNDEQVKRVY 234
Query: 238 M 238
+
Sbjct: 235 L 235
>gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-binding cassette
10; Rim protein [Mus musculus] >gi|2547314|gb|AAC23916.1|
(AF000149) ATP-binding cassette transporter [Mus
musculus]
Length = 2310
Score = 124 bits (308), Expect = 1e-27
Identities = 75/200 (37%), Positives = 109/200 (54%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ S+V + + Y P+
Sbjct: 1961 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTSISDVHQNMGYCPQFD 2020
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
LTG E+L A+L S++ EK+ GI+ GL + TYS G R+L
Sbjct: 2021 AIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRKLST 2080
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL P L +LDEPT+G+D + TI +EG +++SH+M E E LC R+A
Sbjct: 2081 AIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLA 2140
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2141 IMVKGTFQCLGTIQHLKYKF 2160
Score = 121 bits (300), Expect = 9e-27
Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 3/225 (1%)
Query: 3 LVTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
LV V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT
Sbjct: 925 LVPGVCVKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTS 984
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G + G D+ VR+ + P+ + LT E++ F A+L + +A+ ++
Sbjct: 985 GTVLIGGKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEA 1044
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
+E +GL + N++ S GM R+L +A A + K+ +LDEPTSG+D + I +
Sbjct: 1045 MLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLL 1104
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK
Sbjct: 1105 LKY-RSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLK 1148
>gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens]
Length = 2273
Score = 124 bits (308), Expect = 1e-27
Identities = 82/243 (33%), Positives = 129/243 (52%), Gaps = 4/243 (1%)
Query: 4 VTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT G
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSG 985
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V G D+ VR+ + P+ + LT E++ F A+L K +A+ ++
Sbjct: 986 TVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAM 1045
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E +GL + N++ S GM R+L +A A + K+ ILDEPTSG+D + I +
Sbjct: 1046 LEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK + L + +
Sbjct: 1106 KY-RSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGT-GLYLTLVRKM 1163
Query: 242 KNV 244
KN+
Sbjct: 1164 KNI 1166
Score = 120 bits (299), Expect = 1e-26
Identities = 73/200 (36%), Positives = 108/200 (53%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ SEV + + Y P+
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQNMGYCPQFD 2021
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
+ LTG E+L A+L + + EK+ I+ GL + TYS G R+L
Sbjct: 2022 AIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLST 2081
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + I +EG +++SH+M E E LC R+A
Sbjct: 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEALCTRLA 2141
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2142 IMVKGAFRCMGTIQHLKSKF 2161
>emb|CAA75729.1| (Y15635) ABCR [Homo sapiens]
Length = 2273
Score = 124 bits (308), Expect = 1e-27
Identities = 82/243 (33%), Positives = 129/243 (52%), Gaps = 4/243 (1%)
Query: 4 VTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT G
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSG 985
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V G D+ VR+ + P+ + LT E++ F A+L K +A+ ++
Sbjct: 986 TVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAM 1045
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E +GL + N++ S GM R+L +A A + K+ ILDEPTSG+D + I +
Sbjct: 1046 LEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK + L + +
Sbjct: 1106 KY-RSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGT-GLYLTLVRKM 1163
Query: 242 KNV 244
KN+
Sbjct: 1164 KNI 1166
Score = 120 bits (299), Expect = 1e-26
Identities = 73/200 (36%), Positives = 108/200 (53%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ SEV + + Y P+
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQNMGYCPQFD 2021
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
+ LTG E+L A+L + + EK+ I+ GL + TYS G R+L
Sbjct: 2022 AIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLST 2081
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + I +EG +++SH+M E E LC R+A
Sbjct: 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEALCTRLA 2141
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2142 IMVKGAFRCMGTIQHLKSKF 2161
>gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 124 bits (308), Expect = 1e-27
Identities = 76/233 (32%), Positives = 129/233 (54%), Gaps = 3/233 (1%)
Query: 13 EKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVK 72
+K +G A++ ++F ++ GE FG +G NGAGK+TTL +L+ PT G A +FG D+V
Sbjct: 1393 DKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFGKDIVA 1452
Query: 73 EASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLN 132
+R+ I Y P+ ++ LT E+LE A++ + + ++ + L + +
Sbjct: 1453 SPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSH 1512
Query: 133 DKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS-KEGVT-F 190
T S G R+L +A A++ P + ILDEP++G+D + + I S + G T
Sbjct: 1513 KPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAV 1572
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY-NAENLEEVFMEAVK 242
++++H+M E + LC R+ ++ GR+ +G+P+ LK RY N LE F VK
Sbjct: 1573 ILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGNHLELEVPFYNGVK 1625
Score = 122 bits (302), Expect = 5e-27
Identities = 78/226 (34%), Positives = 118/226 (51%), Gaps = 5/226 (2%)
Query: 7 VAVSNLEKDY----GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ V NL K Y G A+ + + E +I L+G NGAGKSTT+ +L LL PT G
Sbjct: 449 IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGD 508
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
A + G+ ++ E+RK + P+ + LT E+LE A L + + +
Sbjct: 509 ALILGNSIITNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVEEGSLKSTVVDMA 568
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
E GL +++N V S GM R+L L AL+ K+ ILDEPTSG+D + + IK+
Sbjct: 569 EEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKK 628
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
K+G L+++H+M E E L DR+ ++ G + G+ LK Y
Sbjct: 629 I-KKGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSIFLKHHY 673
>sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANSPORTER (RIM ABC
TRANSPORTER) (RIM PROTEIN) (RMP) (STARGARDT DISEASE
PROTEIN)
Length = 2273
Score = 124 bits (308), Expect = 1e-27
Identities = 82/243 (33%), Positives = 129/243 (52%), Gaps = 4/243 (1%)
Query: 4 VTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT G
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSG 985
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V G D+ VR+ + P+ + LT E++ F A+L K +A+ ++
Sbjct: 986 TVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAM 1045
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E +GL + N++ S GM R+L +A A + K+ ILDEPTSG+D + I +
Sbjct: 1046 LEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK + L + +
Sbjct: 1106 KY-RSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGT-GLYLTLVRKM 1163
Query: 242 KNV 244
KN+
Sbjct: 1164 KNI 1166
Score = 120 bits (299), Expect = 1e-26
Identities = 73/200 (36%), Positives = 108/200 (53%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ SEV + + Y P+
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQNMGYCPQFD 2021
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
+ LTG E+L A+L + + EK+ I+ GL + TYS G R+L
Sbjct: 2022 AIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLST 2081
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + I +EG +++SH+M E E LC R+A
Sbjct: 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEALCTRLA 2141
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2142 IMVKGAFRCMGTIQHLKSKF 2161
>pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana (fragment)
Length = 1246
Score = 124 bits (308), Expect = 1e-27
Identities = 76/233 (32%), Positives = 129/233 (54%), Gaps = 3/233 (1%)
Query: 13 EKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVK 72
+K +G A++ ++F ++ GE FG +G NGAGK+TTL +L+ PT G A +FG D+V
Sbjct: 823 DKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFGKDIVA 882
Query: 73 EASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLN 132
+R+ I Y P+ ++ LT E+LE A++ + + ++ + L + +
Sbjct: 883 SPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSH 942
Query: 133 DKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS-KEGVT-F 190
T S G R+L +A A++ P + ILDEP++G+D + + I S + G T
Sbjct: 943 KPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAV 1002
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY-NAENLEEVFMEAVK 242
++++H+M E + LC R+ ++ GR+ +G+P+ LK RY N LE F VK
Sbjct: 1003 ILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGNHLELEVPFYNGVK 1055
>dbj|BAB03898.1| (AP001507) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 220
Score = 124 bits (308), Expect = 1e-27
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 5/211 (2%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + V NL K L+ V +I++ +++G++G NG+GKS K +A LL PT G +
Sbjct: 3 TIIEVQNLSKVVKGHHLLKKVQLKIDQPKVYGIVGRNGSGKSVFFKTIAGLLVPTEGTVK 62
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
VFG D+ K + K L + G + +G L+ ++ + ++ ++ LK I
Sbjct: 63 VFGEDIGK--GKFPKNFGALLDTPGFLGQYSGFRNLKLLSSI---KNQVTDEELKEVISF 117
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL V YS GM +RL +A+A+M KPKL ILDEP +GLD ++R+ I +F
Sbjct: 118 VGLNPDDPRPVRKYSLGMKQRLGIAQAIMEKPKLLILDEPMNGLDESGVHDMRQMILDFK 177
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRI 215
K+G+T L++SHN ++ LCD V + G++
Sbjct: 178 KQGMTILLASHNSEDISILCDVVYQMDNGQL 208
>gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sapiens]
Length = 2300
Score = 124 bits (308), Expect = 1e-27
Identities = 82/243 (33%), Positives = 129/243 (52%), Gaps = 4/243 (1%)
Query: 4 VTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT G
Sbjct: 953 VPGVCVKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSG 1012
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V G D+ VR+ + P+ + LT E++ F A+L K +A+ ++
Sbjct: 1013 TVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAM 1072
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E +GL + N++ S GM R+L +A A + K+ ILDEPTSG+D + I +
Sbjct: 1073 LEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1132
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK + L + +
Sbjct: 1133 KY-RSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGT-GLYLTLVRKM 1190
Query: 242 KNV 244
KN+
Sbjct: 1191 KNI 1193
Score = 120 bits (299), Expect = 1e-26
Identities = 73/200 (36%), Positives = 108/200 (53%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ SEV + + Y P+
Sbjct: 1989 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILANISEVHQNMGYCPQFD 2048
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
+ LTG E+L A+L + + EK+ I+ GL + TYS G R+L
Sbjct: 2049 AIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLST 2108
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + I +EG +++SH+M E E LC R+A
Sbjct: 2109 AIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEALCTRLA 2168
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2169 IMVKGAFRCMGTIQHLKSKF 2188
>gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 123 bits (307), Expect = 1e-27
Identities = 82/243 (33%), Positives = 129/243 (52%), Gaps = 4/243 (1%)
Query: 4 VTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT G
Sbjct: 926 VPGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSG 985
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V G D+ VR+ + P+ + LT E++ F A+L K +A+ ++
Sbjct: 986 TVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAM 1045
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E +GL + N++ S GM R+L +A A + K+ ILDEPTSG+D + I +
Sbjct: 1046 LEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK + L + +
Sbjct: 1106 KY-RSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGT-GLYLTLVRKM 1163
Query: 242 KNV 244
KN+
Sbjct: 1164 KNI 1166
Score = 120 bits (297), Expect = 2e-26
Identities = 73/200 (36%), Positives = 108/200 (53%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ SEV + + Y P+
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDNTVTSGDATVAGKSILTNISEVHQNMGYCPQFD 2021
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
+ LTG E+L A+L + + EK+ I+ GL + TYS G R+L
Sbjct: 2022 AIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLST 2081
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + I +EG +++SH+M E E LC R+A
Sbjct: 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEALCTRLA 2141
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2142 IMVKGAFRCMGTIQHLKSKF 2161
>gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; prediction=method:''genscan'',
version:''1.0; Date run: 19-Nov-98; Time: 17:00:23'',
score:''296.08''; cDNA=method:''sim4'', score:''990.0'',
desc:''CK01017 Drosophila melanogaster embryo BlueScript,
full length mRNA seq>
Length = 1544
Score = 123 bits (307), Expect = 1e-27
Identities = 74/215 (34%), Positives = 121/215 (55%), Gaps = 6/215 (2%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
++ V NL K YG A+ GVSF +GE FGL+G NGAGK++T +++A L GG +
Sbjct: 1201 SLIVHNLRKRYGDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRI 1260
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE------KMLK 119
G D+ + + R+ Y P+ K +T + L +MA L R+ + + +K
Sbjct: 1261 KGADIREHELKYREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVK 1320
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+E L + +V YS G R+LL A A++ P L +LDEPT+G+D ++ + +
Sbjct: 1321 YWLEKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQC 1380
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGR 214
IK+F + T +++SH+M E E LC+R+A++ G+
Sbjct: 1381 IKDFQGKDRTVVLTSHSMDECEELCNRLAIMAHGK 1415
Score = 98.3 bits (241), Expect = 7e-20
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 25 VSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYL 84
++ I EI L+G NGAGK+T + ++ L+ G+ V ++ + R LI +
Sbjct: 430 LNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGKIIVCSE---RDVASYRHLIGFC 486
Query: 85 PEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVR 144
P+ + +T ++LEF A+L A ++ GL ++ N+ S GM R
Sbjct: 487 PQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKLKKLGLSDKRNEFGKNLSGGMKR 546
Query: 145 RLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLC 204
RL L A+ K+ ILDEP+SGLDI + E+ + KE L+++H M E E L
Sbjct: 547 RLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLRKEKAV-LVTTHYMEEAEVLG 605
Query: 205 DRVALIHKGRILEVGTPRELKER 227
D + ++ G++ +G+P ELK +
Sbjct: 606 DTICILANGKLQSIGSPLELKRK 628
>gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
>gi|9211112|gb|AAF85794.1|AF250238_1 (AF250238)
macrophage ABC transporter [Homo sapiens]
Length = 2146
Score = 123 bits (307), Expect = 1e-27
Identities = 74/226 (32%), Positives = 121/226 (52%), Gaps = 2/226 (0%)
Query: 7 VAVSNLEKDYG--KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ + NL K Y ++ A+ + I GE FGL+G NGAGK++T +++ + G A
Sbjct: 1793 LVLRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAV 1852
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ GH V +E S + Y P+ ++ LTG E+LE +A+L + + G+
Sbjct: 1853 LAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLAR 1912
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL + TYS G R+L A AL+ P + LDEPT+G+D + ++
Sbjct: 1913 LGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVV 1972
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
+EG + +++SH+M E E LC R+A++ GR +G+P+ LK R+ A
Sbjct: 1973 REGRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAA 2018
Score = 112 bits (277), Expect = 4e-24
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V+V +LEK + ALRG+S +G I +G NGAGK+TTL IL+ L P+G
Sbjct: 803 LSPGVSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSG 862
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A + GHDV + +R + P+ + LT E++ F +L +
Sbjct: 863 GSAFILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDR 922
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
++ GL + + + S GM R+L +A A + ++ ILDEPT+G+D + I +
Sbjct: 923 LLQDVGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELL 982
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
++ +EG T ++S+H++ E E L DRVA++ GR+ G+P L+
Sbjct: 983 LKY-REGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLR 1026
>gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
Length = 2146
Score = 123 bits (307), Expect = 1e-27
Identities = 74/226 (32%), Positives = 121/226 (52%), Gaps = 2/226 (0%)
Query: 7 VAVSNLEKDYG--KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ + NL K Y ++ A+ + I GE FGL+G NGAGK++T +++ + G A
Sbjct: 1793 LVLRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAV 1852
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ GH V +E S + Y P+ ++ LTG E+LE +A+L + + G+
Sbjct: 1853 LAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLAR 1912
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
GL + TYS G R+L A AL+ P + LDEPT+G+D + ++
Sbjct: 1913 LGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVV 1972
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
+EG + +++SH+M E E LC R+A++ GR +G+P+ LK R+ A
Sbjct: 1973 REGRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAA 2018
Score = 112 bits (277), Expect = 4e-24
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V+V +LEK + ALRG+S +G I +G NGAGK+TTL IL+ L P+G
Sbjct: 803 LSPGVSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSG 862
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G A + GHDV + +R + P+ + LT E++ F +L +
Sbjct: 863 GSAFILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDR 922
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
++ GL + + + S GM R+L +A A + ++ ILDEPT+G+D + I +
Sbjct: 923 LLQDVGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELL 982
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
++ +EG T ++S+H++ E E L DRVA++ GR+ G+P L+
Sbjct: 983 LKY-REGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLR 1026
>pir||S42925 probable transport protein - Staphylococcus aureus
>gi|459256|emb|CAA83065.1| (Z30588) Potential ABC
transporter [Staphylococcus aureus]
Length = 231
Score = 123 bits (306), Expect = 2e-27
Identities = 77/236 (32%), Positives = 134/236 (56%), Gaps = 13/236 (5%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + +L K G L VSF+++ G+I GL+G NGAGK+T +K++ G +
Sbjct: 4 LTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVIL------GYSSFQS 57
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G+ V + + + I L E G Y ++G E L+ + +S+ + + K+ +L
Sbjct: 58 GNFNVINSKDEKSNIGALIENPGIYPFMSGYENLKLL-----NESKNTQDIDKIVSQLH- 111
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ E ++ K TYS GM ++L +A A + KP+ ILDEP +GLD ++R I + ++E
Sbjct: 112 MDEYIHKKAKTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQKAQE 171
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
GVTFLISSH + E+ + + + +I+KG+I+ + ELK+ + +LE V +E ++
Sbjct: 172 GVTFLISSHILSELVKITNSILIINKGKIVTETSEEELKQ-FKDNDLENVLLEIIE 226
>emb|CAB99138.1| (AL390188) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 123 bits (306), Expect = 2e-27
Identities = 73/213 (34%), Positives = 120/213 (56%), Gaps = 5/213 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+T++ V +L KDYG +A+ +SF + G + G +GPNGAGKSTT++++ L PT G A
Sbjct: 1 MTSIDVRDLTKDYGTRRAVDDLSFTVRPGRVTGFLGPNGAGKSTTMRLVLGLDRPTAGTA 60
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
V G E +L+ L + A+ T ++L +A +R+ ++++ E
Sbjct: 61 TVGGRPYTA-LDEPLRLVGALLDADCAHGSRTARDHLRVLAASNRLPARRVDEVM----E 115
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
+G+ +V TYS GM +RL +A AL+ P++ +LDEP++GLD IR ++
Sbjct: 116 QTGIAAVARRRVRTYSLGMRQRLGIAAALLGDPEVVMLDEPSNGLDPEGIVWIRGLLRGL 175
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRIL 216
+ EG T L+SSH M E D + ++ +GR+L
Sbjct: 176 AAEGRTVLVSSHLMNETASFVDHLVVLGRGRLL 208
>gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-binding cassette 1;
high density lipoprotein deficiency, Tangier type, 1;
cholesterol efflux regulatory protein [Homo sapiens]
>gi|8927983|sp|O95477|ABC1_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1) (CHOLESTEROL EFFLUX
REGULATORY PROTEIN) >gi|4128033|emb|CAA10005.1|
(AJ012376) ATP-binding cassette transporter-1 (ABC-1)
[Homo sapiens] >gi|5734101|gb|AAD49849.1|AF165281_1
(AF165281) ATP cassette binding transporter 1 [Homo
sapiens]
Length = 2201
Score = 123 bits (305), Expect = 2e-27
Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 4/228 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V++ NL K Y G A+ G++ EG+I +G NGAGK+TT+ IL L PT
Sbjct: 835 LKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS 894
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE-KMLK 119
G A + G D+ E S +R+ + P+ + LT E++ F A+L + + +M +
Sbjct: 895 GTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ 954
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+ +++ +L K S S GM R+L +A A + K+ ILDEPT+G+D + I
Sbjct: 955 MALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWEL 1014
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ ++ ++G T ++S+H+M E + L DR+A+I G++ VG+ LK +
Sbjct: 1015 LLKY-RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQ 1061
Score = 109 bits (271), Expect = 2e-23
Identities = 73/222 (32%), Positives = 114/222 (50%), Gaps = 2/222 (0%)
Query: 9 VSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K Y + + A+ + I GE FGL+G NGAGKS+T K+L T G A +
Sbjct: 1854 IKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLN 1913
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
+ ++ EV + + Y P+ + LTG E++EF A L ++ K+ + I G
Sbjct: 1914 RNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLG 1973
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + YS G R+L A AL+ P + LDEPT+G+D + KE
Sbjct: 1974 LVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKE 2033
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G + +++SH+M E E LC R+A++ GR +G+ + LK R+
Sbjct: 2034 GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRF 2075
>gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens]
Length = 2261
Score = 123 bits (305), Expect = 2e-27
Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 4/228 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V++ NL K Y G A+ G++ EG+I +G NGAGK+TT+ IL L PT
Sbjct: 895 LKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS 954
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE-KMLK 119
G A + G D+ E S +R+ + P+ + LT E++ F A+L + + +M +
Sbjct: 955 GTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ 1014
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+ +++ +L K S S GM R+L +A A + K+ ILDEPT+G+D + I
Sbjct: 1015 MALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWEL 1074
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ ++ ++G T ++S+H+M E + L DR+A+I G++ VG+ LK +
Sbjct: 1075 LLKY-RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQ 1121
Score = 110 bits (272), Expect = 2e-23
Identities = 73/222 (32%), Positives = 114/222 (50%), Gaps = 2/222 (0%)
Query: 9 VSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K Y + + A+ + I GE FGL+G NGAGKS+T K+L T G A +
Sbjct: 1914 IKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLN 1973
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
+ ++ EV + + Y P+ + LTG E++EF A L ++ K+ + I G
Sbjct: 1974 XNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLG 2033
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + YS G R+L A AL+ P + LDEPT+G+D + KE
Sbjct: 2034 LVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKE 2093
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G + +++SH+M E E LC R+A++ GR +G+ + LK R+
Sbjct: 2094 GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRF 2135
>gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transporter 1 [Homo sapiens]
Length = 2261
Score = 123 bits (305), Expect = 2e-27
Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 4/228 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V++ NL K Y G A+ G++ EG+I +G NGAGK+TT+ IL L PT
Sbjct: 895 LKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS 954
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE-KMLK 119
G A + G D+ E S +R+ + P+ + LT E++ F A+L + + +M +
Sbjct: 955 GTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ 1014
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+ +++ +L K S S GM R+L +A A + K+ ILDEPT+G+D + I
Sbjct: 1015 MALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWEL 1074
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ ++ ++G T ++S+H+M E + L DR+A+I G++ VG+ LK +
Sbjct: 1075 LLKY-RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQ 1121
Score = 109 bits (271), Expect = 2e-23
Identities = 73/222 (32%), Positives = 114/222 (50%), Gaps = 2/222 (0%)
Query: 9 VSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K Y + + A+ + I GE FGL+G NGAGKS+T K+L T G A +
Sbjct: 1914 IKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLN 1973
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
+ ++ EV + + Y P+ + LTG E++EF A L ++ K+ + I G
Sbjct: 1974 KNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLG 2033
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + YS G R+L A AL+ P + LDEPT+G+D + KE
Sbjct: 2034 LVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKE 2093
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G + +++SH+M E E LC R+A++ GR +G+ + LK R+
Sbjct: 2094 GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRF 2135
>gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sapiens]
Length = 2231
Score = 123 bits (305), Expect = 2e-27
Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 4/228 (1%)
Query: 3 LVTAVAVSNLEKDY--GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
L V++ NL K Y G A+ G++ EG+I +G NGAGK+TT+ IL L PT
Sbjct: 865 LKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS 924
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE-KMLK 119
G A + G D+ E S +R+ + P+ + LT E++ F A+L + + +M +
Sbjct: 925 GTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ 984
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+ +++ +L K S S GM R+L +A A + K+ ILDEPT+G+D + I
Sbjct: 985 MALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWEL 1044
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ ++ ++G T ++S+H+M E + L DR+A+I G++ VG+ LK +
Sbjct: 1045 LLKY-RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQ 1091
Score = 107 bits (265), Expect = 1e-22
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 9 VSNLEKDYGKVK--ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K Y + + A+ + I GE FGL+G NGAGKS+T K+L T G A +
Sbjct: 1884 IKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLN 1943
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
++ EV + + Y P+ + LTG E++EF A L ++ K+ + I G
Sbjct: 1944 ICSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLG 2003
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + YS G R+L A AL+ P + LDEPT+G+D + KE
Sbjct: 2004 LVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKE 2063
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
G + +++SH+M E E LC R+A++ GR +G+ + LK R+
Sbjct: 2064 GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRF 2105
>pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) PAB0303 -
Pyrococcus abyssi (strain Orsay)
>gi|5457885|emb|CAB49375.1| (AJ248284) ribose ABC
transporter, ATP-binding protein (rbsA) [Pyrococcus
abyssi]
Length = 498
Score = 122 bits (304), Expect = 3e-27
Identities = 85/247 (34%), Positives = 134/247 (53%), Gaps = 9/247 (3%)
Query: 4 VTAVAVSNLEKDYGK-VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+TAV +S + K Y V ALRGV+ ++EEGEI GL+G NGAGKST ++IL + PT G
Sbjct: 1 MTAVEMSGIVKVYPDGVVALRGVNLKVEEGEIHGLLGENGAGKSTLMRILYGEIKPTKGE 60
Query: 63 AEVFGHDVVKEA--SEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRK---AEKM 117
+VFG +V +R+ I+ + + T LE L ++A L K EK+
Sbjct: 61 IKVFGKEVSFNGPWDAIREGIAMVYQHFTLVPTFTVLENL-YLAMLSINPGIKISDVEKL 119
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
K + G LN+ V G+ +R+ + +ALM+ K+ ILDEPTS L + E+
Sbjct: 120 AKEKMREVGFEVPLNEIVEDLPVGIQQRVEIIKALMLNAKILILDEPTSVLTPIEVKELF 179
Query: 178 RTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL--EE 235
+T++ + G+T + +H + EV+ + DRV ++ +G ++ E+ ER A + +
Sbjct: 180 KTLRNLKERGITVIFITHKLKEVKEITDRVTVLRRGEVVGTVKTSEVSERELARMMVQRD 239
Query: 236 VFMEAVK 242
V ME K
Sbjct: 240 VVMEISK 246
Score = 88.9 bits (217), Expect = 5e-17
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 10/220 (4%)
Query: 14 KDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKE 73
KD + A++GVSF++ EGEI G+ G G G+ + LA + P G+ E+ G DV K
Sbjct: 264 KDDRGLDAVKGVSFELREGEILGIAGVQGNGQRELAEALAGIRIPEKGKIELLGKDVTKL 323
Query: 74 ASEVRKL--ISYLPEE--AGAYKRLTGLE--YLEFMAKLYAKDSRKAEKMLKLGIELSGL 127
+ R ++Y+P+ G + +E L ++++ K +K ++ E+
Sbjct: 324 PAHERYKSGLAYVPDSRRVGLVLDMNVVENVVLTNLSRVLHKGRISWDKANEMTNEVVEK 383
Query: 128 GERLNDK----VSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
E L + S G +++++ R ++ +PK+ ++ EPT GLDI IR+T+ +
Sbjct: 384 FEVLLSSTKAPIKHLSGGNQQKVMVGREIIREPKVIVVSEPTQGLDIGATEFIRKTLLKL 443
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRE 223
E L+ S ++ E+ L DRVA+I++G+I+ +G E
Sbjct: 444 RDERKGILLISTDLDEILQLSDRVAVIYEGKIMSIGKTEE 483
>emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 122 bits (304), Expect = 3e-27
Identities = 77/230 (33%), Positives = 127/230 (54%), Gaps = 2/230 (0%)
Query: 12 LEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVV 71
L+++ +V+A+ G+SF + GE+ G IGPNGAGKSTT+K+L +L P+GGR V G D
Sbjct: 56 LKRERRQVRAVDGLSFTVSRGEMVGYIGPNGAGKSTTIKMLTGILTPSGGRLRVAGIDPS 115
Query: 72 KEASEVRKLISYL-PEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGER 130
+E + I + + + L ++ M ++Y + + L +EL L E
Sbjct: 116 RERIRLAHRIGVVFGQRTTLWWDLPLIDSYRLMHRMYRIPDARYRENLDRCVELLQLQEL 175
Query: 131 LNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE-GVT 189
L+ V S G R +A AL+ P++ LDEPT GLD+++ ++R + + + E G T
Sbjct: 176 LDVPVRQLSLGQRMRGDIAAALLHDPEVLYLDEPTIGLDVVSKAKVRGFLLDLNAERGTT 235
Query: 190 FLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
L+++H++ ++E LC RV +I GR++ G L E +E V +E
Sbjct: 236 VLLTTHDLQDIEQLCSRVMVIDHGRLMYDGRLEGLHEAGESERTLVVDLE 285
>pir||G82993 probable ATP-binding/permease fusion ABC transporter PA5231
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9951539|gb|AAG08616.1|AE004935_13 (AE004935)
probable ATP-binding/permease fusion ABC transporter
[Pseudomonas aeruginosa]
Length = 916
Score = 122 bits (304), Expect = 3e-27
Identities = 79/234 (33%), Positives = 123/234 (51%), Gaps = 2/234 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ L +G A+ VSF+IE GEIFG +G NG GKSTT+K+L LL + G +
Sbjct: 274 AIEAEGLTCRFGDFVAVDHVSFRIERGEIFGFLGSNGCGKSTTMKMLTGLLPASEGTCAL 333
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
FG V R+ + Y+ + Y L+ + L A+L+ + + +
Sbjct: 334 FGQPVDASDMATRRRVGYMSQAFSLYAELSVRQNLVLHARLFHLPADGIPARVGEMLRRF 393
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS- 184
L + ++ + G+ +RL LA A++ KP++ ILDEPTSG+D + + E S
Sbjct: 394 DLEKVADELPNDLPLGIRQRLSLAVAVIHKPEILILDEPTSGVDPVARDGFWELMVELSR 453
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
++GVT IS+H M E + CDR++L+H G++L TP EL + LE F+
Sbjct: 454 RDGVTIFISTHFMNEAQ-RCDRISLMHAGKVLASDTPDELVRQRGLPTLEATFI 506
Score = 109 bits (269), Expect = 4e-23
Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 7/229 (3%)
Query: 16 YGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVV--KE 73
YG+ +A+ VS +I + GLIGP+G GKS+ L +LA G V D+ +
Sbjct: 18 YGETRAVDDVSLEIPANRMVGLIGPDGVGKSSLLALLAGARKMQDGEIRVLDGDMRDRRH 77
Query: 74 ASEVRKLISYLPEEAGA--YKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERL 131
V I+Y+P+ G Y L+ E ++F +L+ D + E+ + ++ +GL
Sbjct: 78 RRAVCPRIAYMPQGLGKNLYPTLSVFENVDFFGRLFGHDKAERERRIADLLQSTGLAPFA 137
Query: 132 NDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF--SKEGVT 189
S GM ++L L AL+ P L ILDEPT+G+D ++ + I +EG++
Sbjct: 138 ERPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRNQFWELIGRIRAGREGMS 197
Query: 190 FLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
L+++ M E E D + + G++L GTP+EL+ER ++LE F+
Sbjct: 198 VLVATAYMEEAERF-DWLVAMDDGKVLATGTPQELRERTGTQSLESAFI 245
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 122 bits (303), Expect = 4e-27
Identities = 71/230 (30%), Positives = 131/230 (56%), Gaps = 6/230 (2%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
M+ + V + N+ K +G V A++ +S +I++GE L+GP+G GK+TTL+++A L PT
Sbjct: 1 MIGMAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTR 60
Query: 61 GRAEVFGHDVVKEASEV-----RKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE 115
G+ + + V V + ++ + + Y +T + + F KL ++ +
Sbjct: 61 GQIYIEDNLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEID 120
Query: 116 KMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFE 175
K ++ E+ GL E LN K S G +R+ L RA++ +PK+ ++DEP S LD +
Sbjct: 121 KRVREVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVK 180
Query: 176 IRRTIKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+R +K+ ++ GVT + +H+ +E + DR+A+++KG + +VGTP E+
Sbjct: 181 MRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEV 230
>pir||D71179 probable sugar ABC transporter - Pyrococcus horikoshii
>gi|3258144|dbj|BAA30827.1| (AP000007) 498aa long
hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 498
Score = 122 bits (303), Expect = 4e-27
Identities = 82/245 (33%), Positives = 131/245 (53%), Gaps = 7/245 (2%)
Query: 6 AVAVSNLEKDYGK-VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
AV + + K Y V AL+GV F +EEGEI GL+G NGAGKST ++IL + PT G +
Sbjct: 3 AVEMRRIYKVYPDGVVALKGVDFTVEEGEIHGLLGENGAGKSTLMRILYGEIKPTKGEVK 62
Query: 65 VFGHDVVKEA--SEVRKLISYLPEEAGAYKRLTGLE--YLEFMAKLYAKDSRKAEKMLKL 120
VFG V +RK I+ + + T LE YL + + K+ K
Sbjct: 63 VFGDKVEFNGPWDAIRKGIAMVYQHFTLIPTFTVLENLYLSMLTINPNITINEVRKLAKE 122
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
++ G L+D V G+ +R+ + +ALM K+ ILDEPTS L + E+ +T+
Sbjct: 123 KMKDIGFSVPLDDVVEDLPIGIQQRVEIIKALMANAKILILDEPTSVLTPLEVEELFKTL 182
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL--EEVFM 238
++ + G+T + +H + EV+ + DRV ++ +G ++ V +E+ ER A+ + E+ M
Sbjct: 183 RKLKENGITVIFITHKLKEVKEITDRVTVLRRGEVVGVAKTKEVSERDLAKMMVQREIVM 242
Query: 239 EAVKN 243
E K+
Sbjct: 243 EIKKS 247
Score = 94.0 bits (230), Expect = 1e-18
Identities = 65/220 (29%), Positives = 119/220 (53%), Gaps = 10/220 (4%)
Query: 14 KDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKE 73
KD + A++GVSF+++EGEI G+ G G G+ + LA + GR E+ G DV +
Sbjct: 264 KDDRGLDAVKGVSFELKEGEILGIAGVQGNGQKELAEALAGIRRIEKGRIELLGRDVTEL 323
Query: 74 ASEVRKL--ISYLPE--EAGAYKRLTGLEYLEFMAKLYAKDSRKA--EKMLKLGIELSGL 127
+++ R ++Y+P+ + G ++ +E + R+ EK K+G E+
Sbjct: 324 SADKRYKAGLAYVPDSRKVGLVLDMSVVENVILTNLPSVMRGRRISWEKANKIGKEIVER 383
Query: 128 GERLNDKVST----YSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
+ L +ST S G +++++ R ++ +PK+ I+ EPT GLDI IR+T+
Sbjct: 384 FDVLVSSLSTPIKHLSGGNQQKVMVGREIIREPKVVIVSEPTQGLDIGATEFIRKTLVSL 443
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRE 223
+G L+ S ++ E+ L DR+A++++G+I+ +G E
Sbjct: 444 RDQGKGILLISTDLDEILQLSDRIAVMYEGKIMAIGKVEE 483
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 122 bits (302), Expect = 5e-27
Identities = 77/240 (32%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ + NL K Y + + VS + GEI GL+GPNGAGK+TT ++ ++ G
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI 60
Query: 64 EVFGHDV--VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
+ D+ + + R+ I YLP+EA ++RL+ Y MA L +D AE+
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLS--VYDNLMAVLQIRDDLSAEQREDRA 118
Query: 122 IELSGLG--ERLNDKVS-TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
EL E L D + + S G RR+ +ARAL PK +LDEP +G+D ++ +I+R
Sbjct: 119 NELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR 178
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
I+ G+ LI+ HN+ E +C+R ++ +G ++ GTP E+ + E+++ V++
Sbjct: 179 IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ---DEHVKRVYL 235
>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
Length = 317
Score = 122 bits (302), Expect = 5e-27
Identities = 76/226 (33%), Positives = 120/226 (52%), Gaps = 10/226 (4%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ + + N+ K YGK K + +S IE+GE F ++GP+G GKST LKI+ + P G+
Sbjct: 1 MTAKLELRNINKSYGKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQPDSGK 60
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKL--YAKDSRKA-EKMLK 119
+ G DV K R I+ + + Y + + + F ++ + SR+ E K
Sbjct: 61 IIIDGKDVTKLPPNKRN-IAMVFQNYALYPNMNVFDNIAFPLRMNHFRNISRRVHETAQK 119
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
LGIE L+ KV+ S G +R+ LARA++ P L +LDEP S LD + R
Sbjct: 120 LGIE-----NLLDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSNLDARVRYAARNE 174
Query: 180 IKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+K+ +E TFL +H+ E E L DR+ ++H G+ ++G+ EL
Sbjct: 175 LKKIQQELDQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEEL 220
>gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melanogaster]
Length = 1660
Score = 122 bits (302), Expect = 5e-27
Identities = 70/235 (29%), Positives = 132/235 (55%), Gaps = 2/235 (0%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ + NL+K+YGK+KA++G+S ++ EI L+G NGAGK+TT+ ++ ++ PT G A V
Sbjct: 475 IQLFNLQKNYGKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVN 534
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYA-KDSRKAEKMLKLGIELS 125
G+D+ ++ R+ + P+ +K ++ +++ F +KL + ++ E + + +
Sbjct: 535 GYDIRTHLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTML 594
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L ++ S GM R+L L AL K+ + DEP+SG+D + ++ K
Sbjct: 595 KLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQS-EK 653
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEA 240
+G T L+++H M E + L DR+A++ +G++ GT LK+R+ L M++
Sbjct: 654 DGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQS 708
Score = 105 bits (259), Expect = 6e-22
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 4/222 (1%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
V + K Y A++ +SF + E FGL+G NGAGK++T K+LA T G A + G
Sbjct: 1298 VYKISKRYRSKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYIDGT 1357
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS-GL 127
++ +V + I Y P+ ++ LTG E L L R + G+ +S G
Sbjct: 1358 NI--STHKVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPIC-WGLAISFGF 1414
Query: 128 GERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEG 187
+ ++ + YS G R+L A +++ P + LDEPTSG+D ++ + I G
Sbjct: 1415 AKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAG 1474
Query: 188 VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYN 229
+ +++SH+M E E LC R+A++ G +G+ + LK +++
Sbjct: 1475 KSIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFS 1516
>gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum]
Length = 231
Score = 121 bits (301), Expect = 7e-27
Identities = 78/238 (32%), Positives = 125/238 (51%), Gaps = 17/238 (7%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K + K L+ ++ ++ E++GL+G NGAGKST +KI+ +L T G +
Sbjct: 6 IETQKLTKQFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTNGDVYLD 65
Query: 67 GHDVVK-EASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G + + E + + LI P Y L+ + L+ +A D + K+L +L
Sbjct: 66 GSPLTRQELTNIGSLIESPP----TYNHLSAQDNLKVVALNENIDFSEIPKVL----DLV 117
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L KV +S GM +RL +A AL+ KPKL +LDEP++GLD E+R +K +K
Sbjct: 118 NLDVDPKKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRDLLKNLTK 177
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA-ENLEEVFMEAVK 242
+ +ISSH + E++ L D + +IH G++ E +E+ ENLEE+F K
Sbjct: 178 ANTSVIISSHILSEIQQLADHIGIIHNGKL-------EYQEKNKTDENLEEIFFNITK 228
>gi|10957143 Potential ABC transporter [Lactococcus lactis]
>gi|11346268|pir||T43103 ABC transport protein -
Lactococcus lactis plasmid pMRC01
>gi|3582213|gb|AAC56009.1| (AE001272) Potential ABC
transporter [Lactococcus lactis]
Length = 298
Score = 121 bits (301), Expect = 7e-27
Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ +V+NL K K L+ VSF+ +I GL+G NG+GK+T +K + L+ G
Sbjct: 5 IEVFSVNNLSTQIRKKKILKNVSFKGNTSQIIGLVGANGSGKTTIMKSILGLIK-FSGEI 63
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
E+ +++ + + L EE G Y LTG E+L+ + L K+ A+ + I+
Sbjct: 64 EISKINILFNNHPILSRVGSLIEEPGIYPFLTGREHLQCFSILKGKE---AQSDINEIID 120
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L +++K S+YS GM ++L +A AL+ KP L ILDEP +GLDI + ++R I
Sbjct: 121 QLKLTTFIDEKASSYSLGMKQKLAIAIALLNKPILVILDEPMNGLDIQSIHDLRDIIINK 180
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGR 214
+GVTF+ISSH + E+E + D++ +I G+
Sbjct: 181 KNQGVTFVISSHLLSELEKVADQLVIIKDGK 211
>gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melanogaster]
Length = 1463
Score = 121 bits (301), Expect = 7e-27
Identities = 72/230 (31%), Positives = 129/230 (55%), Gaps = 1/230 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ V + L K +GK++ ++ VSF + EG+I L+G NGAGK+T + +LA + PT G A
Sbjct: 336 IAGVQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTA 395
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+ G D+ +E + ++ I P++ +K L+ + +++ ++L + + ++ ++
Sbjct: 396 LINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLK 455
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L E+ S G RRL +A +L K+ I DEP++GLD E+ R I E
Sbjct: 456 KLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILE- 514
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
+KEG T L+++H + + E L DRV +I G++ +G+ LK++ +A L
Sbjct: 515 AKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCL 564
Score = 104 bits (258), Expect = 7e-22
Identities = 62/223 (27%), Positives = 116/223 (51%), Gaps = 2/223 (0%)
Query: 6 AVAVSNLEKDYGKVK-ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
A+ V+ + K YG + A+ +SF ++ GL+GPNGAGK+TT K++ G
Sbjct: 1049 ALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIY 1108
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+ + + ++ K + Y P+ ++ LTG + L+ ++ S+ K + +
Sbjct: 1109 ISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQ 1168
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
G + L+ K++ YS G R++ A A L LDEP++G+D + + I E +
Sbjct: 1169 FGFRKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDPASRRHVWTIINEVA 1227
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
++G L++SHNM E+ LC + ++ G I +G+ + +K +
Sbjct: 1228 QQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNK 1270
>gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanogaster]
Length = 1981
Score = 121 bits (301), Expect = 7e-27
Identities = 72/230 (31%), Positives = 129/230 (55%), Gaps = 1/230 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ V + L K +GK++ ++ VSF + EG+I L+G NGAGK+T + +LA + PT G A
Sbjct: 854 IAGVQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTA 913
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+ G D+ +E + ++ I P++ +K L+ + +++ ++L + + ++ ++
Sbjct: 914 LINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLK 973
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
L E+ S G RRL +A +L K+ I DEP++GLD E+ R I E
Sbjct: 974 KLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILE- 1032
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENL 233
+KEG T L+++H + + E L DRV +I G++ +G+ LK++ +A L
Sbjct: 1033 AKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCL 1082
Score = 104 bits (258), Expect = 7e-22
Identities = 62/223 (27%), Positives = 116/223 (51%), Gaps = 2/223 (0%)
Query: 6 AVAVSNLEKDYGKVK-ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
A+ V+ + K YG + A+ +SF ++ GL+GPNGAGK+TT K++ G
Sbjct: 1567 ALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIY 1626
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+ + + ++ K + Y P+ ++ LTG + L+ ++ S+ K + +
Sbjct: 1627 ISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQ 1686
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
G + L+ K++ YS G R++ A A L LDEP++G+D + + I E +
Sbjct: 1687 FGFRKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDPASRRHVWTIINEVA 1745
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
++G L++SHNM E+ LC + ++ G I +G+ + +K +
Sbjct: 1746 QQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNK 1788
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 121 bits (300), Expect = 9e-27
Identities = 77/240 (32%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ + NL K Y + + VS + GEI GL+GPNGAGK+TT ++ ++ G
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNI 60
Query: 64 EVFGHDV--VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
+ D+ + + R+ I YLP+EA ++RL+ Y MA L +D AE+
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLS--VYDNLMAVLQIRDDLSAEQREDRA 118
Query: 122 IELSGLG--ERLNDKVS-TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
EL E L D + + S G RR+ +ARAL PK +LDEP +G+D ++ +I+R
Sbjct: 119 NELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKR 178
Query: 179 TIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
I+ G+ LI+ HN+ E +C+R ++ +G ++ GTP E+ + E+++ V++
Sbjct: 179 IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ---DEHVKRVYL 235
>gi|4557876 ATP-binding cassette, sub-family A member 4; ATP binding cassette
transporter; ATP-binding transporter, retina-specific;
rim protein [Homo sapiens] >gi|1888527|gb|AAC51144.1|
(U88667) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 121 bits (300), Expect = 9e-27
Identities = 80/243 (32%), Positives = 128/243 (51%), Gaps = 4/243 (1%)
Query: 4 VTAVAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
V V V NL K + A+ ++ E +I +G NGAGK+TTL IL LL PT G
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSG 985
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
V G D+ VR+ + P+ + LT E++ F A+L K +A+ ++
Sbjct: 986 TVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAM 1045
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
+E +GL + N++ S GM R+L +A A + K+ ILDEPTSG+D + I +
Sbjct: 1046 LEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
++ + G T ++ +H+M E ++ DR+A+I +GR+ GTP LK + L + +
Sbjct: 1106 KY-RSGRTIIMPTHHMDEADHQGDRIAIIAQGRLYCSGTPLFLKNCFGT-GLYLTLVRKM 1163
Query: 242 KNV 244
KN+
Sbjct: 1164 KNI 1166
Score = 119 bits (295), Expect = 3e-26
Identities = 72/200 (36%), Positives = 108/200 (54%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ SEV + + Y P+
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQNMGYCPQFD 2021
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
+ LTG E+L A+L + + EK+ I+ GL + TYS G R+L
Sbjct: 2022 AIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLST 2081
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + I ++G +++SH+M E E LC R+A
Sbjct: 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIRKGRAVVLTSHSMEECEALCTRLA 2141
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2142 IMVKGAFRCMGTIQHLKSKF 2161
>pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis elegans
Length = 1767
Score = 121 bits (300), Expect = 9e-27
Identities = 73/227 (32%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+A+ + +L K +G+ A+ + +++ E FGL+G NGAGK+TT IL + G A
Sbjct: 1440 SALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAM 1499
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G DV + S I Y P+ LTG E LE +A+++ ++ KA+ +L +E
Sbjct: 1500 IGGRDVTELIS-----IGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELILEC 1552
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLD---IMNAFEIRRTIK 181
G+ + V YS G R++ + AL+ ++ ILDEPT+G+D +E+ +
Sbjct: 1553 VGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCR 1612
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
E S + +++SH+M E E LC R+A++++G ++ +G+ +ELK Y
Sbjct: 1613 EHSNSAL--MLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1657
Score = 113 bits (280), Expect = 2e-24
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 7 VAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ V NL K + +A+ G+S + G+ L+G NGAGKSTT +A ++ PT GR
Sbjct: 611 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 670
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+DV E E R+ I P+ Y +LT E+L+ + L + ++ +K +
Sbjct: 671 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 730
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + N+K S GM R+L + AL+ ++ +LDEPT+G+D ++++ + E
Sbjct: 731 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLV-ERE 789
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
K T L+++H M E E L D V ++ G+++ GT + LK+++ L V ++
Sbjct: 790 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLD 844
>pir||T42749 ATP-binding cassette transport protein homolog - Caenorhabditis
elegans >gi|3172341|gb|AAC24116.1| (AF049142) ATP-binding
cassette transporter [Caenorhabditis elegans]
Length = 1704
Score = 121 bits (300), Expect = 9e-27
Identities = 73/227 (32%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+A+ + +L K +G+ A+ + +++ E FGL+G NGAGK+TT IL + G A
Sbjct: 1377 SALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAM 1436
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G DV + S I Y P+ LTG E LE +A+++ ++ KA+ +L +E
Sbjct: 1437 IGGRDVTELIS-----IGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELILEC 1489
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLD---IMNAFEIRRTIK 181
G+ + V YS G R++ + AL+ ++ ILDEPT+G+D +E+ +
Sbjct: 1490 VGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCR 1549
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
E S + +++SH+M E E LC R+A++++G ++ +G+ +ELK Y
Sbjct: 1550 EHSNSAL--MLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1594
Score = 113 bits (280), Expect = 2e-24
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 7 VAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ V NL K + +A+ G+S + G+ L+G NGAGKSTT +A ++ PT GR
Sbjct: 546 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 605
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+DV E E R+ I P+ Y +LT E+L+ + L + ++ +K +
Sbjct: 606 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 665
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + N+K S GM R+L + AL+ ++ +LDEPT+G+D ++++ + E
Sbjct: 666 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLV-ERE 724
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
K T L+++H M E E L D V ++ G+++ GT + LK+++ L V ++
Sbjct: 725 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLD 779
>sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOSOME III
Length = 1758
Score = 121 bits (300), Expect = 9e-27
Identities = 73/227 (32%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+A+ + +L K +G+ A+ + +++ E FGL+G NGAGK+TT IL + G A
Sbjct: 1431 SALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAM 1490
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G DV + S I Y P+ LTG E LE +A+++ ++ KA+ +L +E
Sbjct: 1491 IGGRDVTELIS-----IGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELILEC 1543
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLD---IMNAFEIRRTIK 181
G+ + V YS G R++ + AL+ ++ ILDEPT+G+D +E+ +
Sbjct: 1544 VGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCR 1603
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
E S + +++SH+M E E LC R+A++++G ++ +G+ +ELK Y
Sbjct: 1604 EHSNSAL--MLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1648
Score = 113 bits (280), Expect = 2e-24
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 7 VAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ V NL K + +A+ G+S + G+ L+G NGAGKSTT +A ++ PT GR
Sbjct: 600 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 659
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+DV E E R+ I P+ Y +LT E+L+ + L + ++ +K +
Sbjct: 660 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 719
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + N+K S GM R+L + AL+ ++ +LDEPT+G+D ++++ + E
Sbjct: 720 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLV-ERE 778
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
K T L+++H M E E L D V ++ G+++ GT + LK+++ L V ++
Sbjct: 779 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLD 833
>emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk8d5.5 comes from this gene; cDNA EST yk10f12.3 comes
from this gene~cDNA EST yk5b3.3 comes from this gene;
cDNA EST yk5b3.5 comes from >
Length = 1689
Score = 121 bits (300), Expect = 9e-27
Identities = 73/227 (32%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+A+ + +L K +G+ A+ + +++ E FGL+G NGAGK+TT IL + G A
Sbjct: 1362 SALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAM 1421
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G DV + S I Y P+ LTG E LE +A+++ ++ KA+ +L +E
Sbjct: 1422 IGGRDVTELIS-----IGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELILEC 1474
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLD---IMNAFEIRRTIK 181
G+ + V YS G R++ + AL+ ++ ILDEPT+G+D +E+ +
Sbjct: 1475 VGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCR 1534
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
E S + +++SH+M E E LC R+A++++G ++ +G+ +ELK Y
Sbjct: 1535 EHSNSAL--MLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1579
Score = 113 bits (280), Expect = 2e-24
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 7 VAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ V NL K + +A+ G+S + G+ L+G NGAGKSTT +A ++ PT GR
Sbjct: 533 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+DV E E R+ I P+ Y +LT E+L+ + L + ++ +K +
Sbjct: 593 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 652
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + N+K S GM R+L + AL+ ++ +LDEPT+G+D ++++ + E
Sbjct: 653 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLV-ERE 711
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
K T L+++H M E E L D V ++ G+++ GT + LK+++ L V ++
Sbjct: 712 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLD 766
>emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk251b11.3 comes from this gene~cDNA EST yk251b11.5 comes
from this gene~cDNA EST yk576e5.5 comes from this
gene~cDNA EST yk595f5.5 comes>
Length = 1691
Score = 121 bits (300), Expect = 9e-27
Identities = 73/227 (32%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+A+ + +L K +G+ A+ + +++ E FGL+G NGAGK+TT IL + G A
Sbjct: 1364 SALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAM 1423
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G DV + S I Y P+ LTG E LE +A+++ ++ KA+ +L +E
Sbjct: 1424 IGGRDVTELIS-----IGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELILEC 1476
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLD---IMNAFEIRRTIK 181
G+ + V YS G R++ + AL+ ++ ILDEPT+G+D +E+ +
Sbjct: 1477 VGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCR 1536
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
E S + +++SH+M E E LC R+A++++G ++ +G+ +ELK Y
Sbjct: 1537 EHSNSAL--MLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1581
Score = 113 bits (280), Expect = 2e-24
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 7 VAVSNLEKDYGKV--KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ V NL K + +A+ G+S + G+ L+G NGAGKSTT +A ++ PT GR
Sbjct: 533 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
+ G+DV E E R+ I P+ Y +LT E+L+ + L + ++ +K +
Sbjct: 593 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 652
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
L + N+K S GM R+L + AL+ ++ +LDEPT+G+D ++++ + E
Sbjct: 653 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLV-ERE 711
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
K T L+++H M E E L D V ++ G+++ GT + LK+++ L V ++
Sbjct: 712 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLD 766
>emb|CAC05759.1| (AL391751) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 318
Score = 120 bits (299), Expect = 1e-26
Identities = 74/227 (32%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
M TAV + K YG V+A+ G++ + GE L+GPNGAGKSTTL +L L P
Sbjct: 1 MTRTTAVGFDRVTKGYGDVRAVDGLTLALHPGETVALLGPNGAGKSTTLDLLLGLRRPDA 60
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G VFG + + V + + + G +T E + L+ + A+ + +
Sbjct: 61 GTVHVFGGE--PREAVVAGRVGAMLQSGGLMDEVTVAELVRLGCALHPRAYPAADVLARA 118
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
G L+ + +R DK+S G +R+ A A L +LDEPT+G+D+ T+
Sbjct: 119 G--LTKIADRRVDKLSG---GQAQRVRFALATAGDSDLIVLDEPTTGMDVTARQAFWATM 173
Query: 181 KEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+E + +G T L ++H + E + + DRV ++H+GR+L GT E+K R
Sbjct: 174 REQADQGRTVLFATHYLEEADAIADRVLVLHRGRLLADGTAAEIKAR 220
>gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein GLNQ [Salmonella
typhimurium]
Length = 240
Score = 120 bits (298), Expect = 2e-26
Identities = 75/233 (32%), Positives = 123/233 (52%), Gaps = 4/233 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ N+ K +G + L + I +GE+ +IGP+G+GKST L+ + L T G V
Sbjct: 2 IEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVD 61
Query: 67 G---HDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEF-MAKLYAKDSRKAEKMLKLGI 122
G +D + +R+ + ++ + LT LE + F ++ +AEK K +
Sbjct: 62 GLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGVKKEEAEKQAKALL 121
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
GL ER + S S G +R+ +ARAL VKPK+ + DEPTS LD E+ + +++
Sbjct: 122 AKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQD 181
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEE 235
++EG+T +I +H + E + R+ I KGRI E G+P+ L E + L+E
Sbjct: 182 LAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGSPQALIENPPSPRLQE 234
>gb|AAC48716.1| (U90126) ABC transporter [Bos taurus]
Length = 2281
Score = 120 bits (298), Expect = 2e-26
Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 5/226 (2%)
Query: 3 LVTAVAVSNLEK---DYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPT 59
LV V V NL K YG+ A+ ++ E +I +G NGAGK+TTL I+ LL PT
Sbjct: 925 LVPGVCVKNLVKIFEPYGR-PAVDRLNITFYESQITAFLGHNGAGKTTTLSIMTGLLPPT 983
Query: 60 GGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLK 119
G V G D+ +R+ + P+ + LT E++ F A+L + +A+ ++
Sbjct: 984 SGTVLVGGKDIETNLDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWDEAQLEME 1043
Query: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+E +GL + N++ S G+ R+L +A A + K+ +LDEPTSG+D + I
Sbjct: 1044 AMLEDTGLHHKRNEEARDLSGGVQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDL 1103
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
+ ++ + G T ++S+H+M E + L DR+A+I +GR+ GTP LK
Sbjct: 1104 LLKY-RSGRTIIMSTHHMDEADILGDRIAIISQGRLYCSGTPLFLK 1148
Score = 117 bits (291), Expect = 1e-25
Identities = 71/200 (35%), Positives = 107/200 (53%)
Query: 29 IEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEA 88
+ GE FGL+G NGAGK+TT K+L T G A V G ++ S+V + + Y P+
Sbjct: 1960 VRPGECFGLLGVNGAGKTTTFKMLTGDTAVTSGDATVAGKSILTNISDVHQSMGYCPQFD 2019
Query: 89 GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLL 148
LTG E+L A+L + + E++ I+ GL + TYS G R+L
Sbjct: 2020 AIDDLLTGREHLYLYARLRGVPAEEIERVTNWSIQSLGLSLYADRLAGTYSGGNKRKLST 2079
Query: 149 ARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVA 208
A AL+ P L +LDEPT+G+D + TI +E +++SH+M E E LC R+A
Sbjct: 2080 AIALIGCPPLVLLDEPTTGMDPQARRMLWNTIMGIIREERAVVLTSHSMEECEALCTRLA 2139
Query: 209 LIHKGRILEVGTPRELKERY 228
++ KG +GT + LK ++
Sbjct: 2140 IMVKGAFQCLGTIQHLKSKF 2159
>gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001]
Length = 305
Score = 120 bits (297), Expect = 2e-26
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
A+ + + K +G + +SF + GE FGL+GPNGAGKST ++L ++ P G+ V
Sbjct: 7 AIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMIWPDRGKITV 66
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
V A R+ + +P+ T E L + + +R E ++ +E +
Sbjct: 67 LDEPVPSRA-RARRGVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFA 125
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + +VS GM RRL LARAL+ P L ++DEPT+GLD I ++
Sbjct: 126 RLESKADVRVSLLGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLA 185
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
G T L+++H M E E LCD + ++ G + G P L + + N+ E++
Sbjct: 186 RGKTILLTTHFMEEAERLCDPLCVLESGCKIAEGEPDALIDEHIGCNVIEIY 237
>pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf) PAB1875 -
Pyrococcus abyssi (strain Orsay)
>gi|5458167|emb|CAB49656.1| (AJ248285) dipeptide ABC
transporter, ATP-binding protein (dppF) [Pyrococcus
abyssi]
Length = 326
Score = 120 bits (297), Expect = 2e-26
Identities = 80/232 (34%), Positives = 121/232 (51%), Gaps = 17/232 (7%)
Query: 5 TAVAVSNLEKDY---------GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATL 55
T + V NL+K + G VKA+ GVSF+I+ GE FGL+G +G GK+TT + + L
Sbjct: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
Query: 56 LHPTGGRAEVFGHDVVKEASEVRK------LISYLPEEAGAYKRLTGLEYLEFMAKLYAK 109
+ PT G+ G DV K E K I + + R T + + K +
Sbjct: 64 IEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGI 123
Query: 110 DSRKAEKMLKLGIELSGLGE-RLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGL 168
E+ + +E GL E L +S G +R+ LAR L +KP+ +LDEPTS L
Sbjct: 124 QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSAL 183
Query: 169 DIMNAFEIRRTIKEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVG 219
D+ I T+KE K G T+L SH++ V+Y+ DR+ +++ G+++EVG
Sbjct: 184 DVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
>dbj|BAB05306.1| (AP001512) iron(III) dicitrate transport system (permease)
[Bacillus halodurans]
Length = 491
Score = 120 bits (297), Expect = 2e-26
Identities = 69/225 (30%), Positives = 128/225 (56%), Gaps = 7/225 (3%)
Query: 18 KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVV----KE 73
K ++ +SFQ+ +GEIFG++GPNG+GK+T LK ++ LL P+ G + G + KE
Sbjct: 14 KTPIIQQLSFQVHKGEIFGILGPNGSGKTTLLKAVSGLLSPSEGTITLHGKAIADYHSKE 73
Query: 74 ASEVRKLISYLPEEAGAY--KRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERL 131
++ ++ + A AY K + L A +S++ E++++ +E + +
Sbjct: 74 LAQKMAVLPQTADTAFAYKVKEVVALGRYPHQKGWLASESQEDERVIREAMEQTDTWKFR 133
Query: 132 NDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK-EGVTF 190
N + T S G +R LLARAL +P L +LDEPT+ LDI + ++ +K++++ +T
Sbjct: 134 NKPLQTLSGGERQRALLARALCQEPDLLLLDEPTNHLDISHQMQLLDALKDWTRTRQLTV 193
Query: 191 LISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEE 235
+ H++ CDRV L+++GR++++ +PR++ + N+ E
Sbjct: 194 VAILHDLNMASLYCDRVLLLNEGRMVDLNSPRQVMTEHQLANVYE 238
>dbj|BAB04910.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 247
Score = 119 bits (295), Expect = 3e-26
Identities = 71/239 (29%), Positives = 125/239 (51%), Gaps = 3/239 (1%)
Query: 7 VAVSNLEKDYGKVK-ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
V V L Y K L + +I E+ GLIG NGAGKSTT+K + L+ P G +
Sbjct: 5 VVVEGLTGGYRPNKPVLHDLHLKIRANELVGLIGLNGAGKSTTIKHILGLMEPHKGSVMI 64
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G+ + + R+ ++Y+PE Y+ LT E++E A Y + + E+ KL ++
Sbjct: 65 NGNTITTDRETYRRSLAYIPETPILYEELTLWEHMELTALAYGIERKAFEERSKLLLDEF 124
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
+ + + S +SKGM +++++ A ++ P + I+DEP GLD + + + K
Sbjct: 125 RMTKMKHWYPSHFSKGMRQKVMIICAFLIDPPVYIVDEPIVGLDPIGIQSFLQLLATKKK 184
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAEN--LEEVFMEAVK 242
G L+S+H + E CDR ++++GRI+ GT ++ N + L+++++E K
Sbjct: 185 NGAAVLMSTHILATAERYCDRFIILNRGRIVLEGTLESMRAELNMPDATLDDIYIEMTK 243
>sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|72464|pir||QRECGQ
glutamine transport protein glnQ - Escherichia coli
>gi|581098|emb|CAA32384.1| (X14180) GlnQ (AA 1-240); gtg
start [Escherichia coli] >gi|1651363|dbj|BAA35481.1|
(D90718) Glutamine transport protein GlnQ. [Escherichia
coli] >gi|1651369|dbj|BAA35491.1| (D90719) Glutamine
transport protein GlnQ. [Escherichia coli]
>gi|1787029|gb|AAC73896.1| (AE000183) ATP-binding
component of glutamine high-affinity transport system
[Escherichia coli K12]
Length = 240
Score = 118 bits (294), Expect = 4e-26
Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 4/233 (1%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ N+ K +G + L + I +GE+ +IGP+G+GKST L+ + L T G V
Sbjct: 2 IEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVD 61
Query: 67 G---HDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEF-MAKLYAKDSRKAEKMLKLGI 122
G +D + +R+ + ++ + LT LE + F ++ + +AEK+ + +
Sbjct: 62 GLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLARELL 121
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
GL ER + S S G +R+ +ARAL VKPK+ + DEPTS LD E+ + +++
Sbjct: 122 AKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQD 181
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEE 235
++EG+T +I +H + E + R+ I KGRI E G P+ L + ++ L+E
Sbjct: 182 LAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQVLIKNPPSQRLQE 234
>pir||T36064 ABC-type transport system ATP-binding protein - Streptomyces
coelicolor >gi|3928734|emb|CAA22230.1| (AL034355) ABC
transporter ATP-binding protein [Streptomyces coelicolor
A3(2)]
Length = 303
Score = 118 bits (294), Expect = 4e-26
Identities = 73/222 (32%), Positives = 125/222 (55%), Gaps = 6/222 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+T + + ++ + +G V A+ ++ I G + GL+GPNGAGKST + ++ L P+ G
Sbjct: 1 MTTLNIDHVSRWFGNVVAVNDITMTIGPG-VTGLLGPNGAGKSTLINMMGGFLAPSTGSV 59
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+ G V + ++ K I +PE Y LTG E++ A+L+ +R A++ L +E
Sbjct: 60 TLDGQPVWRN-EDIYKHIGIVPEREAMYDFLTGREFVLANAELHGLGARAADEALAT-VE 117
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
++ +R K++TYSKGM +R+ +A AL+ +P L +LDEP +G+D ++ ++
Sbjct: 118 MAYAQDR---KIATYSKGMRQRVKMASALVHQPSLLLLDEPFNGMDPRQRMQLMDLLRRM 174
Query: 184 SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELK 225
EG T L SSH + EVE L + +I GR G R+++
Sbjct: 175 GDEGRTVLFSSHILEEVEQLAWHIEVIVAGRHAASGDFRKIR 216
>pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elegans
>gi|3806158|gb|AAC69223.1| (AF101313) similar to the
ATP-binding transport protein family (ABC transporter)
(Pfam: ABC_tran.hmm, score: 162.68 and 139.46)
[Caenorhabditis elegans]
Length = 1802
Score = 118 bits (293), Expect = 6e-26
Identities = 72/226 (31%), Positives = 114/226 (49%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
TA+ +NL K YG A++GV+F + + FGL+G NGAGK++T ++L + G A
Sbjct: 1448 TALVSNNLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAY 1507
Query: 65 VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIEL 124
V G V E Y P+ K ++G E L A++ + K + I
Sbjct: 1508 VNGWSVKNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHA 1567
Query: 125 SGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFS 184
G+G + ++ TYS G RRL L A++ P + +LDEPTSG+D I +
Sbjct: 1568 IGIGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLR 1627
Query: 185 KEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
G +++SH+M E E LC +A++ G+ G+ + +K RY +
Sbjct: 1628 DLGTALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGS 1673
Score = 101 bits (249), Expect = 8e-21
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 25/245 (10%)
Query: 3 LVTAVAVSNLEKDYG----------------KVKALRGVSFQIEEGEIFGLIGPNGAGKS 46
L+ + V NL K YG + +A+ ++ ++ G+ L+G NGAGKS
Sbjct: 580 LIPTINVVNLTKTYGTSFFKKLFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKS 639
Query: 47 TTLKILATLLHPTGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKL 106
TT +L + P+ G A V D+ ++R+ + P+ + +T +E+LEF AKL
Sbjct: 640 TTFSMLTGVASPSSGSAYVNDFDIRTSLPKIRREMGLCPQYNTLFGFMTVMEHLEFFAKL 699
Query: 107 YAK--DSRKAEKML-KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDE 163
+ D +A ++L +L I+ + + S G R+L LA AL+ ++ +LDE
Sbjct: 700 KERTWDPEEAREILARLRIDF-----KADFMAGALSGGQKRKLSLAIALIGGSEVVMLDE 754
Query: 164 PTSGLDIMNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRE 223
PTSG+D A T+ + KE T L+++H M E + L DR+A++ G++ G+P
Sbjct: 755 PTSGMD-PGARHETWTLIQREKERRTILLTTHFMEEADLLGDRIAIMAHGQLECCGSPMF 813
Query: 224 LKERY 228
LK++Y
Sbjct: 814 LKQQY 818
>gb|AAC43327.1| (U17255) NisF [Lactococcus lactis] >gi|1095449|prf||2109193A nisF
gene [Lactococcus lactis]
Length = 225
Score = 117 bits (291), Expect = 1e-25
Identities = 72/235 (30%), Positives = 122/235 (51%), Gaps = 16/235 (6%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
V + NL K Y + + L+ +SF I+ G + GL+G NGAGKST +KIL L+ G+
Sbjct: 3 VKIQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIFFD 62
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
G + + + L E Y L+ + L+ A L+ ++ + L E+ G
Sbjct: 63 GQE------KTNNQLGALIEAPAIYMNLSAFDNLKTKALLFGISDKRIHETL----EVIG 112
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E + +S GM +RL + A++ +P+ ILDEPT+GLD E+ I + +
Sbjct: 113 LAETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLKAK 172
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
GVT LISSH + E+ + ++ +++KG+I R + +++E++F + V
Sbjct: 173 GVTILISSHQLHEISKVASQIIILNKGKI------RYNRANNKEDDIEQLFFKIV 221
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 117 bits (290), Expect = 1e-25
Identities = 71/231 (30%), Positives = 128/231 (54%), Gaps = 2/231 (0%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
++ + V + NL K +G A+ ++ I++GE L+GP+G GK+TTL+++A L PT
Sbjct: 7 VIKMVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTE 66
Query: 61 GRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
GR DV + R IS + + + +T E + F K+ + +K ++
Sbjct: 67 GRIYFGDRDVTYLPPKDRN-ISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRW 125
Query: 121 GIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTI 180
EL + E LN + S G +R+ +ARA++V+P + ++DEP S LD +R I
Sbjct: 126 AAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEI 185
Query: 181 KEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNA 230
K+ K VT + +H+ +E + DR+A++++G++L++G+P E+ R N+
Sbjct: 186 KKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNS 236
>pir||T35757 probable branched chain amino acid transport ATP-binding protein -
Streptomyces coelicolor >gi|5689905|emb|CAB52068.1|
(AL109732) putative branched chain amino acid transport
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 238
Score = 117 bits (290), Expect = 1e-25
Identities = 78/225 (34%), Positives = 121/225 (53%), Gaps = 4/225 (1%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+ + V +L YGK++A++G+SF+++ GE+ LIG NGAGK+TTL+ L+ LL P GG+
Sbjct: 1 MTALLEVEDLRVAYGKIEAVKGISFKVDAGEVVTLIGTNGAGKTTTLRTLSGLLKPVGGQ 60
Query: 63 AEVFGHDVVK-EASEVRKL-ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKL 120
G + K A ++ L +++ PE + R+T + L A L D EK ++
Sbjct: 61 IRFGGKSLKKVPAHQIVSLGLAHSPEGRHIFPRMTIEDNLRLGAFL-RSDRPGIEKDIQR 119
Query: 121 GIELSG-LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
+L LGER T S G + L + RALM +PKL +LDEP+ GL + +I T
Sbjct: 120 AYDLFPILGERRKQAAGTLSGGEQQMLAMGRALMSQPKLLMLDEPSMGLSPIMMQKIMAT 179
Query: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
I E +G T L+ N L D ++ G I+ G+ ++L
Sbjct: 180 IAELKSQGTTILLVEQNAQAALSLADHGHVMEVGNIVLSGSGQDL 224
>pir||E82065 ABC transporter, ATP-binding protein VC2528 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|2317737|gb|AAC46369.1| (AF013987) putative ABC
transporter ATP-binding protein [Vibrio cholerae]
>gi|9657111|gb|AAF95669.1| (AE004322) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 241
Score = 116 bits (289), Expect = 2e-25
Identities = 73/236 (30%), Positives = 131/236 (54%), Gaps = 16/236 (6%)
Query: 11 NLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDV 70
+L K Y K K + VS Q+E G+I GL+GPNGAGK+T+ ++ L+ G + +D+
Sbjct: 8 HLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITIDDNDI 67
Query: 71 --VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
+ S R I YLP+EA +++L+ + + MA L ++ E+ +L L
Sbjct: 68 SILPMHSRSRMGIGYLPQEASIFRKLSVEDNI--MAVLQTREELTHEERQD---KLEDLL 122
Query: 129 ERLNDKVSTYSKGMV------RRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
E + + S GM RR+ +ARAL P+ +LDEP +G+D ++ +I++ I+
Sbjct: 123 EEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIEH 182
Query: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
G+ LI+ HN+ E +C++ ++ +GR++ GTP+++ N E +++V++
Sbjct: 183 LRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDV---LNNEQVKQVYL 235
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 116 bits (287), Expect = 3e-25
Identities = 66/225 (29%), Positives = 124/225 (54%), Gaps = 2/225 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+T V + N+ K YG + + +SF+IE+GE L+GP+G GKST L++LA L +GG
Sbjct: 17 MTDVTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGLEEISGGDL 76
Query: 64 EVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIE 123
+ G DV+ + + ++ + + Y +T E + F KL + + ++ +
Sbjct: 77 -LMGADVINDRPAKERDMAIVFQNYALYPHMTVAENMGFALKLRKRPRAEIDERVDKAAA 135
Query: 124 LSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEF 183
+ GLG+ L+ S G +R+ + RA++ P++ + DEP S LD ++R IK
Sbjct: 136 ILGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEIKAL 195
Query: 184 SKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ +T + +H+ +E + D++ ++++GR+ ++GTP EL +R
Sbjct: 196 HQRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDR 240
>dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 247
Score = 116 bits (287), Expect = 3e-25
Identities = 74/240 (30%), Positives = 129/240 (52%), Gaps = 14/240 (5%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV- 65
+AV +L K +G+V+ L+G+ +E G++ +IGP+G+GK+T L+ L L PT G ++
Sbjct: 2 IAVQSLYKKFGEVEVLKGLDLTVERGKVVVVIGPSGSGKTTLLRCLNILETPTSGSVQIE 61
Query: 66 ------FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLK 119
G KE + R+L + + + +T L+ + + K KA+ K
Sbjct: 62 NQTLDFSGKVSSKEIANFRRLTGMVFQSYNLFPHMTVLQNV-MEGPMTVKKEAKAQVEEK 120
Query: 120 LGIELSGLGERLNDKVSTY----SKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFE 175
L+ +G L DK + Y S G +R+ +ARAL ++PK+ + DEPTS LD E
Sbjct: 121 AKQLLAKVG--LADKETVYPFQLSGGQQQRVGIARALAMEPKVMLFDEPTSALDPELVGE 178
Query: 176 IRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEE 235
+ R +KE ++EG+T ++ +H M + + D V + G+I+E GTP ++ + E ++
Sbjct: 179 VLRVMKELAEEGMTMIVVTHEMRFAQEVADEVIFMDDGKIVERGTPDDIFKTPKVERTKQ 238
>pir||S42927 probable transport protein - Staphylococcus epidermidis
>gi|459262|emb|CAA83061.1| (Z30586) ABC transporter
(putative) [Staphylococcus epidermidis]
>gi|6594276|dbj|BAA88414.1| (AB016613) ATP-binding
protein [Staphylococcus aureus]
>gi|6594280|dbj|BAA88417.1| (AB016614) ATP-binding
protein [Staphylococcus aureus]
>gi|6594284|dbj|BAA88420.1| (AB016615) ATP-binding
protein [Staphylococcus aureus]
Length = 231
Score = 115 bits (285), Expect = 5e-25
Identities = 72/235 (30%), Positives = 128/235 (53%), Gaps = 13/235 (5%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K G L+ +S ++ G+I GL+G NGAGK++ +K++ G EV
Sbjct: 4 LTVEHLTKKIGNKTILKDISLNLKRGQIVGLVGANGAGKTSLMKVILGYSIYQEGNFEVI 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
E + + L E G Y ++G + L+ + +++ + + + +L
Sbjct: 64 ------ENKHKKSNVGALIENPGVYPFMSGYDNLKLL-----NETKNTQDIDTIVSQLK- 111
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ E +++K TYS GM ++L +A A + +P+L ILDEP +GLD ++R I + ++E
Sbjct: 112 MDEYIHNKAKTYSLGMKQKLGIAIAFLNQPQLIILDEPMNGLDPRAVRDVRELIVKKAEE 171
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
GVTFLISSH + E+ + + + +I+KG+I+ T EL + Y +LE V + +
Sbjct: 172 GVTFLISSHILSELVKITNSILIINKGKIVTETTEEELNQ-YKDNDLENVLLSII 225
>sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64082 ATP-binding protein
homolog HI0621 - Haemophilus influenzae (strain Rd
KW20) >gi|1573615|gb|AAC22280.1| (U32744) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 345
Score = 115 bits (285), Expect = 5e-25
Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 5/223 (2%)
Query: 18 KVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVK----E 73
K+ AL VS IE+G+I G+IG +GAGKST ++ + L PT G V G ++ K E
Sbjct: 17 KLTALDNVSLNIEKGQICGVIGASGAGKSTLIRCVNLLEKPTSGSVIVDGVELTKLSDRE 76
Query: 74 ASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLND 133
R+ I + + T E + +L ++ K ++ + ++L GL E+ +
Sbjct: 77 LVLARRQIGMIFQHFNLLSSRTVFENVALPLELESESKAKIQEKITALLDLVGLSEKRDA 136
Query: 134 KVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE-GVTFLI 192
S S G +R+ +ARAL PK+ + DE TS LD I + +KE ++ G+T L+
Sbjct: 137 YPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSILKLLKEINRTLGITILL 196
Query: 193 SSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEE 235
+H M V+ +CD+VA+I +GR++E GT E+ E +E
Sbjct: 197 ITHEMEVVKQICDQVAVIDQGRLVEQGTVGEIFANPKTELAQE 239
>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
>gi|4240130|dbj|BAA74845.1| (AB020629) KIAA0822 protein
[Homo sapiens]
Length = 1581
Score = 115 bits (285), Expect = 5e-25
Identities = 76/250 (30%), Positives = 131/250 (52%), Gaps = 19/250 (7%)
Query: 7 VAVSNLEKDY-GKVK----------ALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATL 55
+ S L K+Y GK K A R VSF + +GE+ GL+G NGAGKST++K++
Sbjct: 1240 IIASCLRKEYAGKRKGCFSKRKNKIATRNVSFCVRKGEVLGLLGHNGAGKSTSIKVITGD 1299
Query: 56 LHPTGGRAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAE 115
PT G+ + G + + + Y P+E + LT ++LE A + AE
Sbjct: 1300 TKPTAGQVLLKGSG----GGDALEFLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAE 1355
Query: 116 KMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFE 175
+ ++ L ++L V T S+G+ R+L +++ P + +LDEP++G+D +
Sbjct: 1356 VAITRLVDALKLQDQLKSPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQ 1415
Query: 176 IRRTIKE-FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLE 234
+ + I+ F L+++H M E E +CDRVA++ GR+ +G+ + LK ++ + L
Sbjct: 1416 MWQAIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLL 1475
Query: 235 EVFMEAVKNV 244
E+ VKN+
Sbjct: 1476 EM---KVKNL 1482
>pir||S42931 probable transport protein stpB - Staphylococcus hominis
>gi|459265|emb|CAA83063.1| (Z30587) Potential ABC
transporter [Staphylococcus hominis]
Length = 231
Score = 114 bits (283), Expect = 9e-25
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K G L+ +S ++ G+I GL+G NGAGK++ +K++ G EV
Sbjct: 4 LTVEHLTKKIGNKTILKDISLNLKRGQIVGLVGANGAGKTSLMKVILGYSIYQEGNFEVI 63
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
E + + L E G Y ++G + L+ + +++ + + + +L
Sbjct: 64 ------ENKHKKSNVGALIENPGIYPFMSGYDNLKLL-----NETKNTQDIDTIVSQLK- 111
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
+ E +++K TYS GM ++L +A A + +P+L ILDEP +GLD ++R I + ++E
Sbjct: 112 MDEYIHNKAKTYSLGMKQKLGIAIAFLNQPQLIILDEPMNGLDPRAVRDVRELIVKKAEE 171
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
G+TFLISSH + E+ + + + +I+KG+I+ T EL + Y +LE V + +
Sbjct: 172 GITFLISSHILSELVKITNSILIINKGKIVTETTEEELNQ-YKDNDLENVLLSII 225
>pir||F70501 probable ABC-typetransport protein - Mycobacterium tuberculosis
(strain H37RV) >gi|2326730|emb|CAB10944.1| (Z98268)
hypothetical protein Rv1687c [Mycobacterium
tuberculosis]
Length = 255
Score = 114 bits (283), Expect = 9e-25
Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 7/237 (2%)
Query: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
AV + L GK AL+ VS ++ G I GL+GP+G+GK+T ++ + G V
Sbjct: 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
Query: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
G ++E+R + Y+P++ Y L ++ + + A+L D + A+++ IE
Sbjct: 77 LGQPA--GSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEV----IEAV 130
Query: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSK 185
L + + + S G R+ LA AL+ +P L +LDEPT GLD + E+ ++
Sbjct: 131 DLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR 190
Query: 186 EGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
G T L+SSH M E + C + L+ +G++L TP L++ +LEE F+ V+
Sbjct: 191 RGTTLLVSSHVMDEAD-RCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVR 246
>gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis]
Length = 257
Score = 114 bits (282), Expect = 1e-24
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ ++V NL K Y K VSFQ+ GEI GL+GPNGAGK+T L+ P G+
Sbjct: 1 MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 64 EVFGHDVVKEASEVRKL--ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
D+ K+ + R I YL +E +K LT E L + ++ K ++ +L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
I+ L L+ K + S G RRL +A L + P + +LDEP + +D + ++ IK
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+ G+ LI+ HN E+ + DR LI G+I G+ ++
Sbjct: 181 ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>pir||G71486 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3329103|gb|AAC68248.1| (AE001336)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 239
Score = 114 bits (282), Expect = 1e-24
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ ++V NL K Y K VSFQ+ GEI GL+GPNGAGK+T L+ P G+
Sbjct: 1 MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 64 EVFGHDVVKEASEVRKL--ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
D+ K+ + R I YL +E +K LT E L + ++ K ++ +L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
I+ L L+ K + S G RRL +A L + P + +LDEP + +D + ++ IK
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+ G+ LI+ HN E+ + DR LI G+I G+ ++
Sbjct: 181 ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>pir||T29454 ABC transport protein - Streptomyces coelicolor
>gi|3367766|emb|CAA20091.1| (AL031155) ABC transporter
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 312
Score = 114 bits (282), Expect = 1e-24
Identities = 67/236 (28%), Positives = 120/236 (50%), Gaps = 5/236 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ L K YG+ A+ G+ F ++ G + G +GPNGAGKSTT++++ L PT G V
Sbjct: 2 IEARRLTKRYGEKTAVDGLDFVVKPGTVTGFLGPNGAGKSTTMRLIVGLDAPTSGSVTVN 61
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
GH + +++ + L E + + +L+ +A + + +++ I L+G
Sbjct: 62 GHPYAHHRAPLQE-VGALLEAKSIHPGRSAYNHLKALALTHGIPGSRVDEV----IGLAG 116
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L + +S GM +RL +A AL+ P+ +LDEP +GLD IR +K + +
Sbjct: 117 LDNVAKKRAGAFSLGMGQRLGIAAALLGDPQTVMLDEPVNGLDPEGVLWIRNLLKGLADQ 176
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVK 242
G T +SSH M E+ + D + ++ +GR+L T +L + ++ V + +
Sbjct: 177 GRTVFVSSHLMSEMALVADHLIIVGRGRLLADTTVADLIREAGGDTVKVVTQDPAR 232
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 114 bits (282), Expect = 1e-24
Identities = 65/227 (28%), Positives = 123/227 (53%), Gaps = 2/227 (0%)
Query: 2 VLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
++V V + + K +GK AL+G+ +I++GE L+GP+G GK+TTL+I+A L P G
Sbjct: 1 MVVAGVRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAG 60
Query: 62 RAEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
R G DV + R ++ + + + + + + F K+ + + ++
Sbjct: 61 RVYFDGRDVTGLPPKDRN-VAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRVRWA 119
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
EL + L+ S G +R+ +ARA++ +P++ ++DEP S LD + ++R IK
Sbjct: 120 AELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIK 179
Query: 182 EFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+ + GVT + +H+ +E + DR+ +++ G I +VGTP ++ R
Sbjct: 180 KLQRRLGVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHR 226
>pir||E81023 ABC transporter, ATP-binding protein NMB1948 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7227207|gb|AAF42277.1| (AE002543) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 245
Score = 114 bits (282), Expect = 1e-24
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
M+++ V+ +D + A+ S +I +GEIFGL+G +GAGKST L+++ L P
Sbjct: 1 MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAGKSTLLRLINLLERPDS 60
Query: 61 GRAEVFGHDV----VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEK 116
G+ V G ++ + R+ I + ++ T + + F ++ S K +
Sbjct: 61 GKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNRTVADNVAFPLEIAGWPSEKIKA 120
Query: 117 MLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEI 176
+K +E+ GL ER + S G +R+ +ARAL KP++ + DEPTS LD +
Sbjct: 121 RVKECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKPQVILADEPTSALDPATTRSV 180
Query: 177 RRTIKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEV 218
+++ +K VT +I +H M + LCDR AL+ KG+++E+
Sbjct: 181 LECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKVVEI 223
>gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 239
Score = 113 bits (281), Expect = 2e-24
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
++ ++V NL K Y K VSFQ+ GEI GL+GPNGAGK+T L+ P G+
Sbjct: 1 MSVLSVCNLIKRYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 64 EVFGHDVVKEASEVRKL--ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
D+ K+ + R I YL +E +K LT E L + ++ K ++ +L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
I+ L L+ K + S G RRL +A L + P + +LDEP + +D + ++ IK
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+ G+ LI+ HN E+ + DR LI G+I G+ ++
Sbjct: 181 ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>emb|CAC11868.1| (AL445065) ATP-binding protein related resistance protein
[Thermoplasma acidophilum]
Length = 319
Score = 113 bits (281), Expect = 2e-24
Identities = 71/231 (30%), Positives = 116/231 (49%), Gaps = 3/231 (1%)
Query: 9 VSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGH 68
V NL K Y +R S +I G I L+G NGAGKSTT+K + LL P G
Sbjct: 9 VRNLSKIYPGGSGVRNASIKIRYGSIHALLGNNGAGKSTTMKCITGLLEPDSIEISFRGT 68
Query: 69 DVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLG 128
+ +++K I Y+PE K T + + ++ +A + + GL
Sbjct: 69 TYPWNSKDLKKHIGYVPELPAFPKVFTVHDCIVSYGRMMGLGKAEAVGRAMPIVSILGLE 128
Query: 129 ERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEGV 188
E + +VS+ S+GM+++L + AL+ P + I+DEPT+GLD+ E+ I+ G
Sbjct: 129 EHMKKRVSSLSRGMLQKLDIVIALLSDPDVIIMDEPTAGLDVSAVEELFGIIRSLRDRGK 188
Query: 189 TFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
+ LISSH + ++E + D V ++ G ++ G+ +K+ Y + EV E
Sbjct: 189 SILISSHQLRDIETISDSVTVMDSGHVIFDGS---IKDLYASAGSVEVVAE 236
>dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.]
Length = 363
Score = 113 bits (280), Expect = 2e-24
Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 2/223 (0%)
Query: 3 LVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGR 62
+V +V++ N+ K Y K + GVS IE GE L+GP+G GKSTTL+++A L +GG
Sbjct: 1 MVASVSIQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGT 60
Query: 63 AEVFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGI 122
+ G V+ + + + ++ + + Y L + + F +L + +K
Sbjct: 61 IRIDGR-VINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAA 119
Query: 123 ELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE 182
++ GL L K S S G +R+ + RA++ PK+ + DEP S LD ++R IK
Sbjct: 120 DILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRTQMRAEIKR 179
Query: 183 FSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+ G T + +H+ +E L DR+ ++ G I ++G P +L
Sbjct: 180 LHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDL 222
>dbj|BAB05182.1| (AP001512) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 240
Score = 113 bits (280), Expect = 2e-24
Identities = 73/240 (30%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V +L K +G ++ L+G++ +I++G++ +IGP+G+GKST L+ L L PT G +
Sbjct: 2 INVKDLHKSFGSLEVLKGITTEIQKGDVVAVIGPSGSGKSTFLRCLNLLEVPTSGHVWID 61
Query: 67 GHDVVKEASEVRKL---ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG-- 121
++ + V KL I + + + +T +E L F A + K KAE + K
Sbjct: 62 DEEITHPKTNVGKLRTKIGMVFQHFHLFPHMTVMENLTF-APMKVKGVSKAEAIAKGESL 120
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
++ GL E+ ++ S S G +R+ +ARAL + P++ + DEPTS LD E+ +K
Sbjct: 121 LQKVGLLEKRDEYPSRLSGGQKQRVAIARALAMDPEVMLFDEPTSALDPEMVKEVLAVMK 180
Query: 182 EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
+ ++ G+T +I +H M + + DRV + +G +LE P++ +E + F+E V
Sbjct: 181 DLAETGMTMVIVTHEMGFAKEVADRVLFLDQGILLEDLPPKQFFAAPKSERARD-FLEKV 239
>gi|9964444 AMV130 [Amsacta moorei entomopoxvirus]
>gi|9944653|gb|AAG02836.1|AF250284_130 (AF250284) AMV130
[Amsacta moorei entomopoxvirus]
Length = 1384
Score = 112 bits (277), Expect = 4e-24
Identities = 75/236 (31%), Positives = 128/236 (53%), Gaps = 11/236 (4%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+++ +SN+ K Y AL ++F+I EG+ FG+IG NG GKST KIL+ T G
Sbjct: 1070 SSLIMSNVYKIYNNKLALNNINFKISEGKCFGIIGGNGCGKSTIFKILSGEECVTKGNIY 1129
Query: 65 VFGHD---VVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLG 121
+ + ++K S K ISY + G LTG + L+ + L + + + +
Sbjct: 1130 IGCSNRSWILK--SNYFKKISYCSQFFGIDTFLTGRQNLKLIMILNGFSDKHIQYYINIW 1187
Query: 122 IELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIK 181
++L + + + V TYS G+++RL +A +L + L ++DEPTSG+DI++ I +TIK
Sbjct: 1188 LKLLNIEKYADKAVYTYSTGIIKRLKIAMSLAPRSILTLMDEPTSGIDIVSKQIIWKTIK 1247
Query: 182 ------EFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
++ + LISS+N+ E+EYLC V ++ G I+ T +K ++ +
Sbjct: 1248 YIINYNYYNYYKHSILISSNNIEEIEYLCSNVIILDSGNIMYNDTLENIKNIHSTK 1303
>pir||A48362 hypothetical protein 280 (rpoN 5' region) - Alcaligenes eutrophus
>gi|38784|emb|CAA47286.1| (X66793) ORF280 [Ralstonia
eutropha]
Length = 280
Score = 111 bits (276), Expect = 6e-24
Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 21/234 (8%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
+ + V +L+K YG ++ VS ++ GE+ GL+GPNGAGK+T+ ++ L+ G
Sbjct: 37 STLVVRHLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVALDEG--- 93
Query: 65 VFGHDVVKEASEVRKL---------ISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSR--- 112
D+V + + L +SYLP+EA +++L E + + +L + +
Sbjct: 94 ----DIVLDGDHISGLPIHERAPMGLSYLPQEASVFRKLNVEENIRAVLELQVSNGKPLP 149
Query: 113 KAEKMLKLGIELSGL--GERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDI 170
KAE +L L L N+ + S G RR+ +ARAL P+ +LDEP +G+D
Sbjct: 150 KAEIERRLDSLLDDLQIAHLRNNPALSLSGGERRRVEIARALASSPRFILLDEPFAGVDP 209
Query: 171 MNAFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
+ EI+R + + LI+ HN+ E +CD +I +G +L G P E+
Sbjct: 210 IAVGEIQRIVSFLKARNIGVLITDHNVRETLGICDHAYIISEGTVLAAGQPEEI 263
>pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AAC07853.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 253
Score = 111 bits (276), Expect = 6e-24
Identities = 80/245 (32%), Positives = 135/245 (54%), Gaps = 12/245 (4%)
Query: 9 VSNLEKDYGKVKA---LRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
V LE Y +++ L+ V+F + +GEIF +IG +G+GK++ K++ L PT G+ V
Sbjct: 4 VVRLEHIYKEIEGRVILKDVNFSVYKGEIFSIIGGSGSGKTSITKLIVGLWKPTKGKVLV 63
Query: 66 FGHDVVK----EASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSR-KAEKMLKL 120
F +V + E E+RK I Y+ +E + E + F + K ++ + KM
Sbjct: 64 FRKNVPELSGLELDELRKNIGYVFQEGALFDSYRVWENVVFYYLEHGKHNKEELRKMALE 123
Query: 121 GIELSGLGERLNDKV-STYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
++L + E + D S GM +R+ +ARA+ +P+L I DEPTSGLD + + I +
Sbjct: 124 NLKLVNVDESVLDLYPSELFGGMRKRVAIARAIATRPQLIIYDEPTSGLDPITSRVIDKL 183
Query: 180 IKEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFM 238
I E +K G T L+ +H+M+ + DRV +I G I+ +G P E+ + Y ++E F+
Sbjct: 184 ILELRNKTGTTSLVVTHDMISAFTISDRVMVIKNGEIIAIGKPDEVID-YPHPYIQE-FV 241
Query: 239 EAVKN 243
A+K+
Sbjct: 242 GAIKS 246
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 111 bits (276), Expect = 6e-24
Identities = 67/231 (29%), Positives = 133/231 (57%), Gaps = 8/231 (3%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ V + ++ K +G+V A+R +S ++++GE L+GP+G GK+TTL+++A L P+ G+
Sbjct: 1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 64 EVFGHDVVKEASE------VRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKM 117
+ G +V + + + I+ + + Y +T + + F KL ++ ++
Sbjct: 61 YI-GDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQR 119
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
++ EL GL E LN K S G +R+ L RA++ KP++ ++DEP S LD +R
Sbjct: 120 VREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMR 179
Query: 178 RTIKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+K+ ++ GVT + +H+ +E + DR+A++++G + +VG+P E+ ++
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDK 230
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 111 bits (275), Expect = 8e-24
Identities = 66/230 (28%), Positives = 130/230 (55%), Gaps = 6/230 (2%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRA 63
+ V + ++ K +G+V A+R +S ++++GE L+GP+G GK+TTL+++A L P+ G+
Sbjct: 1 MAGVRLVDVWKVFGEVTAVRELSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 64 EVFGHDVVKEASEV-----RKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKML 118
+ V + + I+ + + Y +T + + F KL ++ ++ +
Sbjct: 61 YIGDRLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 119 KLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRR 178
+ EL GL E LN K S G +R+ L RA++ KP++ ++DEP S LD +R
Sbjct: 121 REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRA 180
Query: 179 TIKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKER 227
+K+ ++ GVT + +H+ +E + DR+A++++G + +VG+P E+ ++
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDK 230
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 111 bits (275), Expect = 8e-24
Identities = 76/230 (33%), Positives = 128/230 (55%), Gaps = 14/230 (6%)
Query: 5 TAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAE 64
T + + + K+YG A+R +S + EGE+ L+GP+G GK+TTL++LA L PTGG E
Sbjct: 25 TVLELDGVTKEYGAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGLERPTGGTIE 84
Query: 65 -----VFGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKA--EKM 117
V G D A + + I + ++ + L+ E + F +D+ A ++M
Sbjct: 85 LDAQRVAGPDTFVAAED--REIGIVFQDFALFPHLSVAENVAFGLTDRDEDATAARVDEM 142
Query: 118 LKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIR 177
L L +++ +G+R D++ S G +R+ +AR+L +P + +LDEP S LD+ E+R
Sbjct: 143 LAL-VDMPEMGDRSVDQL---SGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLRVEMR 198
Query: 178 RTIKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
++ KE GVT + +H+ E + DRVA+++ G I +VG P + E
Sbjct: 199 EEVRRILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDPEGVFE 248
>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
>gi|1075335|pir||G64181 ABC-type transport protein
HI1078 - Haemophilus influenzae
>gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 257
Score = 111 bits (274), Expect = 1e-23
Identities = 75/228 (32%), Positives = 127/228 (54%), Gaps = 12/228 (5%)
Query: 4 VTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP----- 58
++ + VSN++K++ L+G+ F+I +GE+ ++GP+G+GK+T L+ L L P
Sbjct: 1 MSMLKVSNIQKNFNGNHVLKGIDFEINKGEVVAILGPSGSGKTTFLRCLNLLERPEQGIL 60
Query: 59 --TGGRAEVFGHDVVKEASEV--RKLISYLPEEAGAYKRLTGLE-YLEFMAKLYAKDSRK 113
T G ++ + +A E+ R+ S + ++ + + LE +E M + +D +
Sbjct: 61 EFTDGSLKIDFSQKISKADELKLRRRSSMVFQQYNLFPHRSALENVMEGMVVVQKQDKAQ 120
Query: 114 A-EKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMN 172
A EK L L +E GL + + S S G +R+ +ARAL VKP + +LDEPTS LD
Sbjct: 121 AREKALSL-LEKVGLKNKADLFPSQLSGGQQQRVGIARALAVKPDIILLDEPTSALDPEL 179
Query: 173 AFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGT 220
E+ +T+K ++EG T +I +H M + + DRV L+ G I+E T
Sbjct: 180 VGEVLQTLKMLAQEGWTMIIVTHEMQFAKDVADRVILMADGHIVEQNT 227
>sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0035
>gi|2127733|pir||C64304 ABC transporter subunit -
Methanococcus jannaschii >gi|1590838|gb|AAB98016.1|
(U67462) ABC transporter subunit [Methanococcus
jannaschii]
Length = 250
Score = 111 bits (274), Expect = 1e-23
Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATL--LHP 58
MV + + V +L G + L+GV+ +EE EI +IGPNGAGKST + + P
Sbjct: 1 MVSIMLLKVEDLHVYRGNREILKGVNLTVEENEIHAIIGPNGAGKSTLAYTIMGISGYKP 60
Query: 59 TGGRAEVFGHDVVKE--ASEVRKLISYLPEEAGAYKRLTGLEYLEF-MAKLYAKDSRKAE 115
T GR G D++ + R ++ +E ++ + YL M + Y KD AE
Sbjct: 61 TKGRIIFKGVDIIDKNITERARMGMTLAWQEPARFEGIKVKNYLMLGMNEKYKKDKEIAE 120
Query: 116 KMLKLGIELSGLG-ERLNDKV--STYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMN 172
+ ++ ++L L ++ D+ T S G +R+ LA + ++P LAILDEP SG+DI++
Sbjct: 121 EKIREALKLVNLDPDKYLDRYVDETLSGGERKRIELASIICMEPDLAILDEPDSGIDIVS 180
Query: 173 AFEIRRTIKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
EI+R +G + L+ +H E+ DRV+LI G +++ G P+E+ E Y E
Sbjct: 181 FDEIKRVFDYLKDKGCSLLVITHREELAEH-ADRVSLICAGEVIKSGDPKEVGEFYKKE 238
>pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealyticum
>gi|6899047|gb|AAF30499.1|AE002109_2 (AE002109) ABC
transporter [Ureaplasma urealyticum]
Length = 236
Score = 111 bits (274), Expect = 1e-23
Identities = 73/234 (31%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 VSNLEKDYGKV-KALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFG 67
V NL K Y K + + +SF ++ GEI IG NG+GK+TT+K + G + G
Sbjct: 9 VKNLTKIYKKSNQGVFDLSFNVKRGEIHAFIGENGSGKTTTIKSIINAYTNYKGSILIDG 68
Query: 68 HDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGL 127
D + + + I Y+PE A LT +YL A+L + ++A + + +E +
Sbjct: 69 FD--NKTPKSHEKIGYVPEIALFPSELTTFQYLYSFARLSNLNKKQAIERIHNFLEKFRI 126
Query: 128 GERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKEG 187
+ N K +S G ++++L +AL+ P+L ILDEPT+ LD E +KE ++
Sbjct: 127 SDLKNKKPINFSSGQKKKVILIQALLHDPELIILDEPTANLDPSARHEFNNILKELHEQN 186
Query: 188 VTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAV 241
T I SH + E++ D + LIHKG+++ G +Y+A LE+++ ++V
Sbjct: 187 KTIFICSHILKEMDTYVDSLTLIHKGKLVYSG------HKYDA--LEKIYYDSV 232
>pir||E81968 probable ABC transport ATP-binding subunit NMA0504 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379248|emb|CAB83797.1| (AL162753) putative ABC
transport ATP-binding subunit [Neisseria meningitidis
Z2491]
Length = 245
Score = 111 bits (274), Expect = 1e-23
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 1 MVLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTG 60
M+++ V+ +D + A+ S +I +GEIFGL+G +GAGKST L+++ L P
Sbjct: 1 MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAGKSTLLRLINLLERPDT 60
Query: 61 GRAEVFGHDV----VKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEK 116
G+ V G ++ + R+ I + ++ T + + F ++ S K +
Sbjct: 61 GKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNRTVADNVAFPLEIAGWPSEKIKA 120
Query: 117 MLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEI 176
+ +E+ GL ER + S G +R+ +ARAL KP++ + DEPTS LD +
Sbjct: 121 RVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKPQVILADEPTSALDPATTRSV 180
Query: 177 RRTIKEFSKE-GVTFLISSHNMLEVEYLCDRVALIHKGRILEV 218
+++ +K VT +I +H M + LCDR AL+ KG+++E+
Sbjct: 181 LECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKVVEI 223
>gi|11498005 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445610|pir||A69299 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2650236|gb|AAB90840.1| (AE001077) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 241
Score = 110 bits (273), Expect = 1e-23
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 8/233 (3%)
Query: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
+ V+NL YGK A+ V F +E GE+ ++GPNGAGKS+ +K + ++ G E+
Sbjct: 2 IEVNNLTVRYGKTTAVSNVGFTVERGEVVAILGPNGAGKSSIMKSIVGIVDFEG---EIK 58
Query: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
+ + L Y+PEE LT E+ F+ + K +A K ++ + +
Sbjct: 59 IDGMNANTKVAKNLFGYVPEEIRLIDHLTPEEFFSFLVSV-RKLGEEAAKRVEKYVRIFR 117
Query: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
L E+++ + + S G +++ + AL+ P +LDEP +GLD +A ++ + ++
Sbjct: 118 LEEQMDKPIISLSMGNKKKVAVVAALLHDPPYLLLDEPLNGLDAFSARVLKEVMARKTES 177
Query: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
G L+S+H M E L DRV ++++G + GT ELK + LEE F++
Sbjct: 178 G-GILLSTHIMEIAERLADRVIILNRGLKIAEGTLEELK---SYGTLEEAFLK 226
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.137 0.369
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81138932
Number of Sequences: 2977
Number of extensions: 3271374
Number of successful extensions: 20018
Number of sequences better than 1.0e-10: 1949
Number of HSP's better than 0.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 1686
Number of HSP's that attempted gapping in prelim test: 16383
Number of HSP's gapped (non-prelim): 2373
length of query: 244
length of database: 189,106,746
effective HSP length: 59
effective length of query: 185
effective length of database: 153,796,013
effective search space: 28452262405
effective search space used: 28452262405
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)