BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0445 (PAB0445) DE:Hypothetical protein
         (186 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H75106 hypothetical protein PAB0445 - Pyrococcus abyssi (st...   374  e-103
pir||E71027 hypothetical protein PH1513 - Pyrococcus horikoshii ...   303  8e-82
gi|11499116 conserved hypothetical protein [Archaeoglobus fulgid...   221  5e-57
gb|AAK43008.1| Conserved hypothetical protein [Sulfolobus solfat...   111  7e-24
pir||B72368 conserved hypothetical protein - Thermotoga maritima...   111  7e-24
pir||B75291 conserved hypothetical protein - Deinococcus radiodu...    92  3e-18
pir||T18653 hypothetical protein B0035.3 - Caenorhabditis elegan...    92  5e-18
pir||T35937 hypothetical protein SC9B5.17 - Streptomyces coelico...    87  1e-16
emb|CAC12232.1| (AL445066) conserved hypothetical protein [Therm...    85  5e-16
pir||I39569 hypothetical protein 2 gbd-region [imported] - Alcal...    85  7e-16
gb|AAF81228.1| (AF263012) unknown [Streptomyces griseus subsp. g...    83  3e-15
pir||B64847 hypothetical protein b1045 - Escherichia coli >gi|17...    82  4e-15
gi|7662500 LRP16 protein [Homo sapiens] >gi|6525027|gb|AAF15294....    78  5e-14
pir||E83182 conserved hypothetical protein PA3693 [imported] - P...    78  9e-14
dbj|BAA86582.1| (AB033094) KIAA1268 protein [Homo sapiens]             76  3e-13

>pir||H75106 hypothetical protein PAB0445 - Pyrococcus abyssi (strain Orsay)
           >gi|5458080|emb|CAB49569.1| (AJ248285) hypothetical
           protein [Pyrococcus abyssi]
           Length = 186
           
 Score =  374 bits (951), Expect = e-103
 Identities = 186/186 (100%), Positives = 186/186 (100%)

Query: 1   MRKMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQ 60
           MRKMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQ
Sbjct: 1   MRKMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQ 60

Query: 61  IGRDWIEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADE 120
           IGRDWIEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADE
Sbjct: 61  IGRDWIEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADE 120

Query: 121 LGVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALKV 180
           LGVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALKV
Sbjct: 121 LGVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALKV 180

Query: 181 LERDEL 186
           LERDEL
Sbjct: 181 LERDEL 186


>pir||E71027 hypothetical protein PH1513 - Pyrococcus horikoshii
           >gi|3257938|dbj|BAA30621.1| (AP000006) 190aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 190
           
 Score =  303 bits (768), Expect = 8e-82
 Identities = 145/181 (80%), Positives = 166/181 (91%)

Query: 1   MRKMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQ 60
           M  MF++V GDIT+F+AEAIVNAANKYLEHGGGVAYAIAKAASGDVSEY RISKEEMR+Q
Sbjct: 1   MITMFKIVRGDITKFRAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYTRISKEEMRRQ 60

Query: 61  IGRDWIEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADE 120
           +G+DWIEHGEVVVTPP+ L +NGVKYVIHTVGPYCGG W +DK +KL+LAILGALKKADE
Sbjct: 61  LGKDWIEHGEVVVTPPMKLKENGVKYVIHTVGPYCGGVWSKDKEEKLKLAILGALKKADE 120

Query: 121 LGVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALKV 180
           LGV+SIAFPAISAGIYGCPL+EVV+TFK VV EFLK A +V +VYLVLYSERDY++AL+ 
Sbjct: 121 LGVKSIAFPAISAGIYGCPLKEVVRTFKEVVKEFLKVANHVKEVYLVLYSERDYKLALET 180

Query: 181 L 181
           +
Sbjct: 181 I 181


>gi|11499116 conserved hypothetical protein [Archaeoglobus fulgidus]
           >gi|7483133|pir||H69439 conserved hypothetical protein
           AF1521 - Archaeoglobus fulgidus
           >gi|2649040|gb|AAB89725.1| (AE000997) conserved
           hypothetical protein [Archaeoglobus fulgidus]
           Length = 199
           
 Score =  221 bits (557), Expect = 5e-57
 Identities = 110/178 (61%), Positives = 135/178 (75%), Gaps = 2/178 (1%)

Query: 6   RVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDW 65
           ++  GDIT++ A+AIVNAANK LEHGGGVAYAIAKA +GD   Y  ISK+ MR+Q GRD+
Sbjct: 22  KLAQGDITQYPAKAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGRDY 81

Query: 66  IEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRS 125
           I+HGEVVVTP +NL + G+KYV HTVGP C G W E+ ++KL  A LG L+KA+E+GV S
Sbjct: 82  IDHGEVVVTPAMNLEERGIKYVFHTVGPICSGMWSEELKEKLYKAFLGPLEKAEEMGVES 141

Query: 126 IAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALKVLER 183
           IAFPA+SAGIYGC LE+VV+TF   V  F  SA  V +V LV+Y  +  EVALKV ER
Sbjct: 142 IAFPAVSAGIYGCDLEKVVETFLEAVKNFKGSA--VKEVALVIYDRKSAEVALKVFER 197


>gb|AAK43008.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 177
           
 Score =  111 bits (274), Expect = 7e-24
 Identities = 73/170 (42%), Positives = 97/170 (56%), Gaps = 15/170 (8%)

Query: 7   VVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDWI 66
           ++ GDIT  +A+AIVNAAN YL+HGGGVAYAI +         I+   +E  K+ G   +
Sbjct: 12  LIKGDITEIEADAIVNAANSYLQHGGGVAYAIVRKG----GYIIQKESDEYVKKFGP--V 65

Query: 67  EHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRSI 126
             GEV VT   +  K   KYVIH VGP  G + ++    KLE AI  +L KADEL + SI
Sbjct: 66  PVGEVAVT---SAGKLKAKYVIHAVGPRYGIEGED----KLESAIFKSLLKADELSLSSI 118

Query: 127 AFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEV 176
           A PAIS GIYG P E   +    V+  +    K +  V + LY++  Y+V
Sbjct: 119 AMPAISTGIYGYPFEICARIMANVLKGY--KPKTLRKVMICLYTKDAYDV 166


>pir||B72368 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
           >gi|4981020|gb|AAD35593.1|AE001727_5 (AE001727)
           conserved hypothetical protein [Thermotoga maritima]
           Length = 599
           
 Score =  111 bits (274), Expect = 7e-24
 Identities = 70/161 (43%), Positives = 95/161 (58%), Gaps = 12/161 (7%)

Query: 3   KMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIG 62
           K  R+V GDITR + +AIVNAAN+YL+HGGGVA AI +A    + E      + + ++ G
Sbjct: 427 KKIRIVKGDITREEVDAIVNAANEYLKHGGGVAGAIVRAGGSVIQE----ESDRIVQERG 482

Query: 63  RDWIEHGEVVVTPPLNLAKNGVKYVIHTVGP-YCGGKWDEDKRKKLELAILGALKKADEL 121
           R  +  GE VVT   +  K   KYVIHTVGP + GG   ED  + L  A+  AL +A EL
Sbjct: 483 R--VPTGEAVVT---SAGKLKAKYVIHTVGPVWRGGSHGED--ELLYKAVYNALLRAHEL 535

Query: 122 GVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVT 162
            ++SI+ PAIS GI+G P E  V  F   + +F+    + T
Sbjct: 536 KLKSISMPAISTGIFGFPKERAVGIFSKAIRDFIDQHPDTT 576


>pir||B75291 conserved hypothetical protein - Deinococcus radiodurans  (strain
           R1) >gi|6460097|gb|AAF11835.1|AE002061_2 (AE002061)
           conserved hypothetical protein [Deinococcus radiodurans]
           Length = 170
           
 Score = 92.4 bits (226), Expect = 3e-18
 Identities = 69/181 (38%), Positives = 95/181 (52%), Gaps = 24/181 (13%)

Query: 7   VVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDWI 66
           +V GDI     +A+V AANK L  GGGV   I +AA   + + IR         IG    
Sbjct: 5   LVQGDIAHQPVDAVVTAANKQLMGGGGVDGVIHRAAGPRLLQAIR--------PIGGT-- 54

Query: 67  EHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGV--- 123
             G  V+TP  +L + GVKYVIH VGP     W   +  + EL + GA +++  LGV   
Sbjct: 55  PTGTAVITPAFDLERQGVKYVIHAVGPI----WRGGQHGEAEL-LAGAYRESLRLGVENG 109

Query: 124 -RSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALKVLE 182
            RS+AFP+IS G+YG PL+         + +FL+S  +++ V +VLY       AL V E
Sbjct: 110 CRSVAFPSISTGVYGYPLDRAAPIALATIQDFLRSHPDLS-VRMVLYGAD----ALHVFE 164

Query: 183 R 183
           R
Sbjct: 165 R 165


>pir||T18653 hypothetical protein B0035.3 - Caenorhabditis elegans
           >gi|3873699|emb|CAA97408.1| (Z73102) predicted using
           Genefinder~Similarity to viral non-structural proteins
           (SW:POLN_EEVV3), contains similarity to Pfam domain:
           PF01661 (Domain of unknown function), Score=212.3,
           E-value=2.4e-60, N=1~cDNA EST yk68b6.3 comes from this
           gene~cDNA EST>
           Length = 203
           
 Score = 91.7 bits (224), Expect = 5e-18
 Identities = 60/171 (35%), Positives = 89/171 (51%), Gaps = 21/171 (12%)

Query: 10  GDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDWIEH- 68
           GDIT+   +AIVNAAN  L  GGGV  AI +AA               RKQ+  +  ++ 
Sbjct: 31  GDITKLSVDAIVNAANSRLAGGGGVDGAIHRAAG--------------RKQLQEECQQYN 76

Query: 69  ----GEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVR 124
               G+ V+T   N+  N +K +IHTVGP   G   +++R+ L      +L  A E G++
Sbjct: 77  GCAVGDAVITSGCNI--NHIKKIIHTVGPQVYGNVTDERRENLVACYRTSLDIAIENGMK 134

Query: 125 SIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYE 175
           SIAF  IS G+YG P ++  KT    + E+L+    +  + LV + + D E
Sbjct: 135 SIAFCCISTGVYGYPNDDAAKTVTNFLTEYLEKNDTIERIVLVTFLDIDNE 185


>pir||T35937 hypothetical protein SC9B5.17 - Streptomyces coelicolor
           >gi|4158196|emb|CAA22759.1| (AL035206) hypothetical
           protein SC9B5.17 [Streptomyces coelicolor A3(2)]
           Length = 169
           
 Score = 87.4 bits (213), Expect = 1e-16
 Identities = 62/170 (36%), Positives = 89/170 (51%), Gaps = 14/170 (8%)

Query: 7   VVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDV-SEYIRISKEEMRKQIGRDW 65
           +V GDITR  A+AIVNAAN  L  GGGV  AI +     + +E  R+    + K +    
Sbjct: 6   LVQGDITRQSADAIVNAANSSLLGGGGVDGAIHRRGGPAILAECRRLRAGHLGKGLPT-- 63

Query: 66  IEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRS 125
              G  V T   +L     ++VIHTVGP       ED+   L      +L+ ADELG R+
Sbjct: 64  ---GRAVATTAGDL---DARWVIHTVGPVWSAT--EDRSGLLASCYRESLRTADELGART 115

Query: 126 IAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYE 175
           +AFPAIS G+Y  P+++     ++ V     +  +VT++  VL+  R YE
Sbjct: 116 VAFPAISTGVYRWPMDDAA---RIAVETVATTKTSVTEIRFVLFDARAYE 162


>emb|CAC12232.1| (AL445066) conserved hypothetical protein [Thermoplasma
           acidophilum]
           Length = 213
           
 Score = 85.0 bits (207), Expect = 5e-16
 Identities = 65/170 (38%), Positives = 85/170 (49%), Gaps = 12/170 (7%)

Query: 4   MFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVS-EYIRISKEEMRKQIG 62
           M  V  GDIT   AEAIVNAAN  L  GGGV  AI  AA  +++ E ++I +E       
Sbjct: 27  MLAVEVGDITESDAEAIVNAANSSLMGGGGVDGAIHSAAGPELNGELVKIRRERY----- 81

Query: 63  RDWIEHGEVVVTPPLNLAKNGVKYVIHTVGP-YCGGKWDEDKRKKLELAILGALKKADEL 121
            + +  GE V+T    L      ++IHTVGP + GG+  ED    L  +    L  A E 
Sbjct: 82  PNGLPPGEAVITRGYRLK---ASHIIHTVGPVWMGGRNGED--DVLYRSYRSCLDLAREF 136

Query: 122 GVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSE 171
           G+  IAFPA+S G YG P +   +     V +FLK       V  V Y+E
Sbjct: 137 GIHDIAFPALSTGAYGFPFDRAERIAIRSVIDFLKDESAGYTVRFVFYTE 186


>pir||I39569 hypothetical protein 2 gbd-region [imported] - Alcaligenes
           eutrophus >gi|695280|gb|AAC41426.1| (L36817) ORF2
           [Ralstonia eutropha] >gi|1093467|prf||2104199H ORF 2
           [Ralstonia eutropha]
           Length = 173
           
 Score = 84.7 bits (206), Expect = 7e-16
 Identities = 60/171 (35%), Positives = 84/171 (49%), Gaps = 10/171 (5%)

Query: 6   RVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDW 65
           +VVHGDITR + +AIVNAAN  L  GGGV  AI  A    + E  R  ++       +  
Sbjct: 7   QVVHGDITRMEVDAIVNAANSGLLGGGGVDGAIHGAGGSAIKEACRAIRDT------QGG 60

Query: 66  IEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRS 125
              GE V+T   +L      YVIH VGP   G  D+ + + L  A   +++ A +  +R 
Sbjct: 61  CPTGEAVITTGGHLP---APYVIHAVGPVWQG-GDQGEDELLANAYRNSIRLAAQHHLRR 116

Query: 126 IAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEV 176
           +AFP IS GIY  P E         V E L +A  +  V  V + + +Y +
Sbjct: 117 LAFPNISTGIYAFPRERAADIAIAAVREALAAAPEIEQVTFVCFDDENYRL 167


>gb|AAF81228.1| (AF263012) unknown [Streptomyces griseus subsp. griseus]
           Length = 177
           
 Score = 82.7 bits (201), Expect = 3e-15
 Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 11/169 (6%)

Query: 6   RVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDW 65
           R+V GDIT    + IVNAAN  L  GGGV  AI +    D+    R    E+R       
Sbjct: 10  RLVRGDITDQSVDVIVNAANSSLLGGGGVDGAIHRRGGPDILAACR----ELRASRYGKG 65

Query: 66  IEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRS 125
           +  G+ V T    L     ++++HTVGP   G   +D+   L      +L+ A ELG RS
Sbjct: 66  LPTGQAVATTAGRL---DARWIVHTVGPVFSGA--QDRSALLASCYRESLRLAAELGARS 120

Query: 126 IAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDY 174
           IAFPAIS GIYG P+++  +    V     ++ + V +V  VL+    Y
Sbjct: 121 IAFPAISTGIYGWPMDDGARI--AVRTVLAETVEPVEEVRFVLFDAHAY 167


>pir||B64847 hypothetical protein b1045 - Escherichia coli
           >gi|1787283|gb|AAC74129.1| (AE000206) putative
           polyprotein [Escherichia coli K12]
           >gi|4062616|dbj|BAA35835.1| (D90741) ORF2 [Escherichia
           coli] >gi|4062622|dbj|BAA35843.1| (D90742) ORF2
           [Escherichia coli]
           Length = 177
           
 Score = 81.9 bits (199), Expect = 4e-15
 Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 12/182 (6%)

Query: 1   MRKMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQ 60
           M+    VV GDIT+   + IVNAAN  L  GGGV  AI +AA   + +       ++R+Q
Sbjct: 1   MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACL----KVRQQ 56

Query: 61  IGRDWIEHGEVVVTPPLNLAKNGVKYVIHTVGP-YCGGKWDEDKRKKLELAILGALKKAD 119
            G     H  + +   L       K V+HTVGP + GG+ +ED+   L+ A L +L+   
Sbjct: 57  QGDCPTGHAVITLAGDLP-----AKAVVHTVGPVWRGGEQNEDQL--LQDAYLNSLRLVA 109

Query: 120 ELGVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTDVYLVLYSERDYEVALK 179
                S+AFPAIS G+YG P     +     V+EF+        VY V Y E +  +  +
Sbjct: 110 ANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYDEENAHLYER 169

Query: 180 VL 181
           +L
Sbjct: 170 LL 171


>gi|7662500 LRP16 protein [Homo sapiens] >gi|6525027|gb|AAF15294.1|AF202922_1
           (AF202922) LRP16 [Homo sapiens]
           Length = 243
           
 Score = 78.4 bits (190), Expect = 5e-14
 Identities = 53/177 (29%), Positives = 88/177 (48%), Gaps = 14/177 (7%)

Query: 1   MRKMFRVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQ 60
           + +   ++  DIT+ + +AIVNAAN  L  GGGV   I +AA   +++  R  +      
Sbjct: 68  LNEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----- 122

Query: 61  IGRDWIEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADE 120
                 + G+  +T    L     KYVIHTVGP   G+    +  +L    L +L    E
Sbjct: 123 -----CKTGKAKITGGYRLP---AKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLE 174

Query: 121 LGVRSIAFPAISAGIYGCPLEEVVKTFKLVVNEFLKSAKNVTD-VYLVLYSERDYEV 176
             +RS+AFP IS G++G P E   +     + E+L+  K+  D + + ++ E+D ++
Sbjct: 175 HRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDI 231


>pir||E83182 conserved hypothetical protein PA3693 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
           >gi|9949858|gb|AAG07081.1|AE004789_1 (AE004789)
           conserved hypothetical protein [Pseudomonas aeruginosa]
           Length = 173
           
 Score = 77.6 bits (188), Expect = 9e-14
 Identities = 55/137 (40%), Positives = 70/137 (50%), Gaps = 14/137 (10%)

Query: 6   RVVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDVSEYIRISKEEMRKQIGRDW 65
           RV  GDITR   +AIVNAAN  L  GGGV  AI +AA  ++    R+             
Sbjct: 5   RVWQGDITRLAVDAIVNAANSSLLGGGGVDGAIHRAAGAELVAACRL----------LHG 54

Query: 66  IEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRS 125
            + GE  +T    L      +VIHTVGP   G  D  + + L      +L  A++ G  S
Sbjct: 55  CKTGEAKITRGFRLP---AAHVIHTVGPVWRG-GDNGEAELLASCYRRSLALAEQAGAAS 110

Query: 126 IAFPAISAGIYGCPLEE 142
           +AFPAIS GIYG PLE+
Sbjct: 111 VAFPAISCGIYGYPLEQ 127


>dbj|BAA86582.1| (AB033094) KIAA1268 protein [Homo sapiens]
           Length = 1023
           
 Score = 76.1 bits (184), Expect = 3e-13
 Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 14/173 (8%)

Query: 7   VVHGDITRFKAEAIVNAANKYLEHGGGVAYAIAKAASGDV-SEYIRISKEEMRKQIGRDW 65
           V  GD+ R   + +VNA+N+ L+H GG+A A++KAA  ++ ++  +I K E R   G   
Sbjct: 149 VQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNAT 208

Query: 66  IEHGEVVVTPPLNLAKNGVKYVIHTVGPYCGGKWDEDKRKKLELAILGALKKADELGVRS 125
           I              K    +VIH VGP   G         L  A+  +L  A++   RS
Sbjct: 209 IS----------KAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRS 258

Query: 126 IAFPAISAGIYGCPLEEVVKTFKLVVNE---FLKSAKNVTDVYLVLYSERDYE 175
           IA PAIS+G++G PL   V+T    + E   F K    + ++YLV  SE+  E
Sbjct: 259 IAIPAISSGVFGFPLGRCVETIVSAIKENFQFKKDGHCLKEIYLVDVSEKTVE 311


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.319    0.138    0.395 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65797077
Number of Sequences: 2977
Number of extensions: 2589601
Number of successful extensions: 8231
Number of sequences better than 1.0e-10: 15
Number of HSP's better than  0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 8204
Number of HSP's gapped (non-prelim): 17
length of query: 186
length of database: 189,106,746
effective HSP length: 55
effective length of query: 131
effective length of database: 156,189,961
effective search space: 20460884891
effective search space used: 20460884891
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)