BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB0468 (pelA) DE:cell division protein PELOTA (PELA) (356 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||G75110 cell division protein pelota (pela) PAB0468 - Pyroco... 705 0.0 pir||B71023 hypothetical protein PH1479 - Pyrococcus horikoshii ... 622 e-177 pir||E69086 cell division protein - Methanobacterium thermoautot... 294 1e-78 sp|Q57638|Y174_METJA HYPOTHETICAL PROTEIN MJ0174 >gi|2127805|pir... 294 1e-78 gi|11498443 cell division protein pelota (pelA) [Archaeoglobus f... 254 9e-67 gb|AAG19802.1| (AE005064) cell division protein pelota; PelA [Ha... 222 5e-57 pir||S75405 hypothetical protein c04039 - Sulfolobus solfataricu... 176 3e-43 gb|AAK40443.1| Cell division protein pelota homolog (pelA) [Sulf... 176 3e-43 emb|CAC12225.1| (AL445066) cell division protein pelota related ... 169 3e-41 gi|11416336 CGI-17 protein [Homo sapiens] 161 9e-39 gi|7705600 CGI-17 protein [Homo sapiens] >gi|4680673|gb|AAD27726... 158 1e-37 gb|AAG22574.1| (AF139828) PELOTA [Homo sapiens] >gi|10764130|gb|... 157 2e-37 pir||F72564 probable DOM34 APE1800 - Aeropyrum pernix (strain K1... 150 2e-35 sp|P50444|YNU6_CAEEL HYPOTHETICAL 42.9 KDA PROTEIN R74.6 IN CHRO... 146 3e-34 pir||T05870 cell division protein pelota - Arabidopsis thaliana ... 145 6e-34 gb|AAF52799.1| (AE003625) pelo gene product [Drosophila melanoga... 142 5e-33 sp|P48612|PELO_DROME PELOTA PROTEIN >gi|11279544|pir||T47122 cel... 142 7e-33 pir||T45999 pelota-like protein - Arabidopsis thaliana >gi|67353... 141 1e-32 pir||T41199 dom34 protein homolog - fission yeast (Schizosacchar... 133 3e-30 gi|6324327 Involved in protein translation; Dom34p [Saccharomyce... 109 6e-23 sp|P33309|DO34_YEAST DOM34 PROTEIN >gi|295608|gb|AAA34575.1| (L1... 106 4e-22 emb|CAB06799.1| (Z86109) unknown [Saccharomyces pastorianus] 100 4e-20 pir||F72501 translation releasing factor aRF-1 APE1988 [similari... 84 3e-15 pir||E75177 translation releasing factor aRF-1 PAB0396 - Pyrococ... 81 2e-14 gi|11498819 peptide chain release factor eRF, subunit 1 [Archaeo... 76 4e-13 >pir||G75110 cell division protein pelota (pela) PAB0468 - Pyrococcus abyssi (strain Orsay) >gi|5458111|emb|CAB49600.1| (AJ248285) cell division protein PELOTA (PELA) [Pyrococcus abyssi] Length = 356 Score = 705 bits (1801), Expect = 0.0 Identities = 356/356 (100%), Positives = 356/356 (100%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP Sbjct: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 Query: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH Sbjct: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 Query: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK Sbjct: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 Query: 181 KFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRV 240 KFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRV Sbjct: 181 KFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRV 240 Query: 241 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLL 300 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLL Sbjct: 241 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLL 300 Query: 301 VLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKIH 356 VLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKIH Sbjct: 301 VLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKIH 356 >pir||B71023 hypothetical protein PH1479 - Pyrococcus horikoshii >gi|3257903|dbj|BAA30586.1| (AP000006) 356aa long hypothetical protein [Pyrococcus horikoshii] Length = 356 Score = 622 bits (1587), Expect = e-177 Identities = 294/355 (82%), Positives = 340/355 (94%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 ME+LEEKPKEGKVK+KVETLDDLWHLYH+I+PGD+VYAKTLRKQ+QRSDSLRPEKVE IP Sbjct: 1 MEILEEKPKEGKVKIKVETLDDLWHLYHIITPGDVVYAKTLRKQSQRSDSLRPEKVEVIP 60 Query: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 VFLGV+ EKIN H+FANQLRVTGPI+YASR+DVPLGKYHTIAVEPG IT+QKERW+ ++ Sbjct: 61 VFLGVKVEKINFHKFANQLRVTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPYY 120 Query: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 +ER+KEAVEASKRAKVMIV +EDGEAE+AIVREYGLDFIA+IRHN+GGKRYN+KREDEE+ Sbjct: 121 IERLKEAVEASKRAKVMIVTIEDGEAEMAIVREYGLDFIATIRHNLGGKRYNIKREDEER 180 Query: 181 KFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRV 240 KFFHDVAKT+KD++ REN+Q+ IVAGPGFYKE+FY FL+ENYP+LA K+VLDDTSMGGRV Sbjct: 181 KFFHDVAKTMKDVMSRENIQRAIVAGPGFYKEDFYKFLKENYPDLASKIVLDDTSMGGRV 240 Query: 241 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLL 300 G+YEVIKRGTVDKVY+E+R+A EIKLVEKVIERIAKDEPVAYG+K+VEEAVNYGAV+ LL Sbjct: 241 GIYEVIKRGTVDKVYSESRIANEIKLVEKVIERIAKDEPVAYGMKEVEEAVNYGAVEILL 300 Query: 301 VLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 VLDELLKGD+RE++EE+ME+AR+LR+ VVVVSSEHEGG+KLKALGGIA ILRFKI Sbjct: 301 VLDELLKGDNREKVEELMELARSLRSKVVVVSSEHEGGEKLKALGGIAGILRFKI 355 >pir||E69086 cell division protein - Methanobacterium thermoautotrophicum (strain Delta H) >gi|2622770|gb|AAB86115.1| (AE000923) cell division protein [Methanobacterium thermoautotrophicum] Length = 360 Score = 294 bits (744), Expect = 1e-78 Identities = 147/357 (41%), Positives = 236/357 (65%), Gaps = 7/357 (1%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRK-QAQRSDSLRPEKVEAI 59 M ++EE K G ++L ETLDDLWHL H+I GD++ A+T R+ Q + +R ++ Sbjct: 8 MRIVEEDEKNGVIELVPETLDDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKK 67 Query: 60 PVFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSH 119 +LG+R E ++ H + +LR TG I D VP+G +HT+ V+ + IQKE W Sbjct: 68 TFYLGIRVETVSFHIYTGRLRATGVIERGPEDLVPMGSHHTLEVKLNTPLRIQKEHWSRW 127 Query: 120 HVERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEE 179 ++R++ AV ASK K +I+ MED AE+ ++R+YG+++ I +I GKR + + Sbjct: 128 TLKRLRMAVRASKNLKAIILVMEDDVAELGLIRQYGVEYRGPITGHIPGKRIQQRDRGKL 187 Query: 180 KKFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGR 239 ++ F++ ++ L + +++ +I+AGPGFYK +FY +L E YPE+A K VL++T GGR Sbjct: 188 RREFYE--SIVESLQKYGDLETIIIAGPGFYKSDFYDYLMERYPEIAKKAVLENTGTGGR 245 Query: 240 VGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKD-EPVAYGLKDVEEAVNYGAVDT 298 G+ EV+++GTV++V +E R+A EI+ V + +E++A+D + V YG +V +A+N GAV+ Sbjct: 246 AGISEVLRKGTVERVSSEKRIASEIRNVNEFLEKLARDPDSVVYGKVEVMDAINMGAVEK 305 Query: 299 LLVLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 LLVLD ++ RE IE ++M ++ +VV++SSEHEGG +L++LGG+A ILRFKI Sbjct: 306 LLVLDRVV---SREDIEGYLDMVESMGGSVVLISSEHEGGKQLESLGGLAGILRFKI 359 >sp|Q57638|Y174_METJA HYPOTHETICAL PROTEIN MJ0174 >gi|2127805|pir||G64321 cell division protein MJ0174 - Methanococcus jannaschii >gi|1590926|gb|AAB98159.1| (U67474) cell division protein pelota (pelA) [Methanococcus jannaschii] Length = 347 Score = 294 bits (744), Expect = 1e-78 Identities = 145/355 (40%), Positives = 233/355 (64%), Gaps = 9/355 (2%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 M+++EE P++ +KL E LDDLW LY++I GD ++A T R+ + D +R ++ Sbjct: 1 MKIIEEIPQKNIIKLMPENLDDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKRK 60 Query: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 +FLG+ + + ++R+ G I++ DDVPLG +HTI ++P ++I+K W+ Sbjct: 61 MFLGIEVKNVEFDENTKRVRILGTIIHGP-DDVPLGSHHTIEIKPFDELSIEKN-WKKWQ 118 Query: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 +ERIKEA+E+SKR KV++V M+D EA++ VR+Y + I SI+ + K E+ +K Sbjct: 119 IERIKEAIESSKRPKVLVVVMDDEEADIFEVRDYSIKEICSIKSHTSKKLDYKINEELKK 178 Query: 181 KFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRV 240 +++H++AK + + +V ++VAGPGF K +FY F+ YPEL K+V++ S R Sbjct: 179 EYYHEIAKVLSEY----DVDNILVAGPGFAKNSFYNFISSQYPELKNKIVVESISTTSRA 234 Query: 241 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLL 300 G+ EVIKRG ++++Y E+RVA+E +L+EK++E IAK YG+ +V++A+ Y A+DTLL Sbjct: 235 GLNEVIKRGIINRIYAESRVAKETQLIEKLLEEIAKKGLAVYGIDEVKKALEYSAIDTLL 294 Query: 301 VLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 V D L++ + IE+I++ + VV+VSSEH+ G +LKALGGIA +LRF I Sbjct: 295 VSDSLVRNHE---IEKIIDTTEEMGGKVVIVSSEHDAGKQLKALGGIAGLLRFPI 346 >gi|11498443 cell division protein pelota (pelA) [Archaeoglobus fulgidus] >gi|7448520|pir||E69354 cell division protein pelota (pelA) homolog - Archaeoglobus fulgidus >gi|2649765|gb|AAB90402.1| (AE001046) cell division protein pelota (pelA) [Archaeoglobus fulgidus] Length = 344 Score = 254 bits (643), Expect = 9e-67 Identities = 144/359 (40%), Positives = 224/359 (62%), Gaps = 21/359 (5%) Query: 1 MEVLEE--KPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEA 58 M+++EE + EG++KL ETLDDLWHL +I GD+V+A T ++ +Q SD LR +K E Sbjct: 1 MQIVEENLRDNEGEIKLIPETLDDLWHLRFIIEKGDVVFATT-KRASQSSDKLRSDK-EM 58 Query: 59 IPVFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRS 118 + V LG+ EK+ HRFAN+LRV+G IV + YHT+ + G ++I K +W+ Sbjct: 59 VTVRLGIEVEKVEFHRFANRLRVSGKIVAGIEES----GYHTLNITVGKELSIIK-KWKP 113 Query: 119 HHVERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDE 178 +ER++ AVE S R +++++ +E+G A ++R++G++ I R Y D Sbjct: 114 EQLERLRRAVEDSNRPEIVMLTIEEGYAVAGVLRQWGVEEIFEERMG-----YGKGMGDS 168 Query: 179 EKKFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGG 238 K+FF +VA ++ + + +IVAGPGF K +F FL+E YPE+A V+ D S G Sbjct: 169 RKEFFGEVAAKLESF----DFKYLIVAGPGFAKNDFLDFLKERYPEMAKNAVVVDVSSVG 224 Query: 239 RVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDT 298 G E++KR VDK+ E R+A+E + +++++E IAK E VAYGL +V EA NY A++ Sbjct: 225 SRGFIEILKRRVVDKIVGEVRLAEEAEYIDRLLEGIAKGERVAYGLDEVREAHNYRAIEV 284 Query: 299 LLVLDELLKGDDRER--IEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 LLV DE L ++RE+ ++ ++ VV++S+E E G +L +LGGIAA+LRF + Sbjct: 285 LLVADEFLL-EEREKWDVDGLLREVEESGGKVVIMSTEFEPGKRLMSLGGIAALLRFNV 342 >gb|AAG19802.1| (AE005064) cell division protein pelota; PelA [Halobacterium sp. NRC-1] Length = 357 Score = 222 bits (560), Expect = 5e-57 Identities = 127/365 (34%), Positives = 209/365 (56%), Gaps = 19/365 (5%) Query: 1 MEVLEEKPKEG---KVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVE 57 M++ + EG ++ L E+LDDLWHL +V+ PGD V T R+ + D +R E Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGE 60 Query: 58 AIPVFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWR 117 +F+ + + H+F+N+LRV+G I SR+D LG +HT+ V + ++K W+ Sbjct: 61 REHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSRED-QLGLHHTLNVAEREELEVEKH-WQ 118 Query: 118 SHHVERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKRED 177 + R+ EAVEA+ + V I +E+GEA + +V++YG+D S G N + D Sbjct: 119 PDQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQNDRGRD 178 Query: 178 EEKKFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMG 237 E + T+ D + R +I+AGPGF K++ + E YP+L + + DTS Sbjct: 179 E-------LFGTLADALARMQADAIILAGPGFTKQDALDHITEEYPDLQETITMVDTSAV 231 Query: 238 GRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVD 297 G GV+EV+KRG V+ V ETR+A+E +L++++ ++A D AYG+ +V++AV +GAV+ Sbjct: 232 GGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDGKAAYGIDEVQKAVEFGAVE 291 Query: 298 TLLVLDELLK------GDDRE-RIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAI 350 LL+LDE L+ GD + + +++ +V V S E G++L+ LGGI A+ Sbjct: 292 DLLILDERLRLERAGEGDWVDVDVNDLVRTVEQQGGSVTVFSHEFAPGEQLRNLGGIGAV 351 Query: 351 LRFKI 355 LR+++ Sbjct: 352 LRYRL 356 >pir||S75405 hypothetical protein c04039 - Sulfolobus solfataricus >gi|1707811|emb|CAA69568.1| (Y08257) pelota/DOM34 homolog [Sulfolobus solfataricus] >gi|1763017|gb|AAB49285.1| (U67942) PelA [Sulfolobus solfataricus] Length = 344 Score = 176 bits (442), Expect = 3e-43 Identities = 117/363 (32%), Positives = 199/363 (54%), Gaps = 26/363 (7%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 M +LE K VKL +E+ DDLW L+ ++ D V AKT R +S R IP Sbjct: 1 MRILEFDEKRQAVKLHIESEDDLWLLHLILEKDDKVVAKTTRDVGLGKESRR------IP 54 Query: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 + + ++ + F N+LR+ G I A G +HTI ++ G I I K++W + Sbjct: 55 MTIILKVDYTEFQEFTNRLRIHGIIEDAPERFGIKGAHHTINLDIGDEIIIIKQQWNKYV 114 Query: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 ++R+K +A+KR++++I ++ E +AI E G+ ++ +++ +EE+ Sbjct: 115 LDRLKR--QANKRSRIIIALVDFDEYLIAIPFEQGIKILSE---------KSLRPLNEEE 163 Query: 181 KFFH----DVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSM 236 ++A + + +++ + +++AGPGF+KE + N K+ +D S Sbjct: 164 GIIEQNALEIATELAEYVKQYDPDAILLAGPGFFKEEVSK--KVNAILKNKKIYIDSVSS 221 Query: 237 GGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKD-EPVAYGLKDVEEAVNYGA 295 R G++EV+KR +DK+ T+ +A K +EK +E +AK E V YGL+ V+ A+ GA Sbjct: 222 ATRAGLHEVLKRDIIDKIMTDYEIAIGAKKMEKAMELLAKQPELVTYGLEQVKNAIEMGA 281 Query: 296 VDTLLVLDELLKGDDRER--IEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRF 353 V+T+LV+++LL D++ER IE ++E N R V++V E +LK L GI AILRF Sbjct: 282 VETVLVIEDLLSSDEQERLTIERMLEDIENKRGEVILVPKESPIYFELKNLTGILAILRF 341 Query: 354 KIH 356 +I+ Sbjct: 342 RIN 344 >gb|AAK40443.1| Cell division protein pelota homolog (pelA) [Sulfolobus solfataricus] Length = 344 Score = 176 bits (442), Expect = 3e-43 Identities = 117/363 (32%), Positives = 199/363 (54%), Gaps = 26/363 (7%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 M +LE K VKL +E+ DDLW L+ ++ D V AKT R +S R IP Sbjct: 1 MRILEFDEKRQAVKLHIESEDDLWLLHLILEKDDKVVAKTTRDVGLGKESRR------IP 54 Query: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 + + ++ + F N+LR+ G I A G +HTI ++ G I I K++W + Sbjct: 55 MTIILKVDYTEFQEFTNRLRIHGIIEDAPERFGIKGAHHTINLDIGDEIIIIKQQWNKYV 114 Query: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 ++R+K +A+KR++++I ++ E +AI E G+ ++ +++ +EE+ Sbjct: 115 LDRLKR--QANKRSRIIIALVDFDEYLIAIPFEQGIKILSE---------KSLRPLNEEE 163 Query: 181 KFFH----DVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSM 236 ++A + + +++ + +++AGPGF+KE + N K+ +D S Sbjct: 164 GIIEQNALEIATELAEYVKQYDPDAILLAGPGFFKEEVSK--KVNAILKNKKIYIDSVSS 221 Query: 237 GGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKD-EPVAYGLKDVEEAVNYGA 295 R G++EV+KR +DK+ T+ +A K +EK +E +AK E V YGL+ V+ A+ GA Sbjct: 222 ATRAGLHEVLKRDIIDKIMTDYEIAIGAKKMEKAMELLAKQPELVTYGLEQVKNAIEMGA 281 Query: 296 VDTLLVLDELLKGDDRER--IEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRF 353 V+T+LV+++LL D++ER IE ++E N R V++V E +LK L GI AILRF Sbjct: 282 VETVLVIEDLLSSDEQERLTIERMLEDIENKRGEVILVPKESPIYFELKNLTGILAILRF 341 Query: 354 KIH 356 +I+ Sbjct: 342 RIN 344 >emb|CAC12225.1| (AL445066) cell division protein pelota related protein [Thermoplasma acidophilum] Length = 339 Score = 169 bits (425), Expect = 3e-41 Identities = 100/355 (28%), Positives = 182/355 (51%), Gaps = 17/355 (4%) Query: 1 MEVLEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIP 60 M +LEE K ++++E+LDDLW+L +++S GD V A T R+ + +D R + E IP Sbjct: 1 MRILEEDLKNSTYRIRIESLDDLWYLRNILSEGDEVSAITFRRVEESADVQRSRERERIP 60 Query: 61 VFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHH 120 + + ++ EKI F N+LR+ G ++ D GK+ +I V I+I KE W H Sbjct: 61 ITIRLKVEKIEFQDFDNRLRILGTVIEGPED--TKGKHQSITVTVDSEISITKE-WDDQH 117 Query: 121 VERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEK 180 ++ +KEA + VAM++ EA++ ++ YG+ + ++ GK + E Sbjct: 118 IDLLKEATDEKYVTVYTAVAMDEDEAQIFLIHPYGIQQVGTVYSGRSGK--YAEGNYSEA 175 Query: 181 KFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRV 240 +F + +K+ +I+ GPGF ++ F + + + G + T G Sbjct: 176 SYFDQIVNALKNY-----SNSIIILGPGFARDRFARYCAQRGVNVIGSFPANRTDSG--- 227 Query: 241 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLL 300 VYE I K+ + R+A++ ++V++ + + KD V YG E A+ GA+ L+ Sbjct: 228 AVYEFITSADGAKLLSNERIARDKEIVDEFLVAVKKDMGV-YGRDQTESALQMGALSDLI 286 Query: 301 VLDELLKGDDRERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 + DE+ + +D R + +A+ + + +VS ++ G +K GG A ILR+++ Sbjct: 287 ITDEMFRTEDGRR---SLSIAQTVGTRIHIVSVSNDPGQIVKKFGGFAGILRYRV 338 >gi|11416336 CGI-17 protein [Homo sapiens] Length = 385 Score = 161 bits (404), Expect = 9e-39 Identities = 114/364 (31%), Positives = 186/364 (50%), Gaps = 16/364 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 EK G+V L E +D+WH Y+++ GD + A T+RK Q S + L + Sbjct: 9 EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRK-VQTESSTGSVGSNRVRTTLTL 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E I+ A QLRV G + + + V +G YHTI +EP T+ K++W S +ERI+ Sbjct: 68 CVEAIDFDSQACQLRVKGTNIQEN-EYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIE 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRY-NVKREDEE-KKFF 183 +A + + A V V M++G A + +V A + NI KR N + D ++F+ Sbjct: 127 QACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDD--------TS 235 V + I+ I + V+ ++VA PGF +E F +L + + K++L++ S Sbjct: 187 EQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKFLQVHAS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + + E + TV ++T+ A E+K ++ + + + A YGLK VE+A Sbjct: 247 SGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAM 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A+DTLL+ DEL + D R R +++ + V + SS H G++L L G+AAIL Sbjct: 307 AIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLTGVAAIL 366 Query: 352 RFKI 355 RF + Sbjct: 367 RFPV 370 >gi|7705600 CGI-17 protein [Homo sapiens] >gi|4680673|gb|AAD27726.1|AF132951_1 (AF132951) CGI-17 protein [Homo sapiens] Length = 385 Score = 158 bits (395), Expect = 1e-37 Identities = 113/364 (31%), Positives = 185/364 (50%), Gaps = 16/364 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 EK G+V L E +D+WH Y+++ GD + A T+RK Q S + L + Sbjct: 9 EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRK-VQTESSTGSVGSNRVRTTLTL 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E I+ A QLRV G + + + V +G YHTI +EP T+ K++W S +ERI+ Sbjct: 68 CVEAIDFDSQACQLRVKGTNIQEN-EYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIE 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRY-NVKREDEE-KKFF 183 +A + + A V V M++G A + +V A + NI KR N + D ++F+ Sbjct: 127 QACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDD--------TS 235 V + I+ I + V+ ++VA PGF +E F ++ + + K++L + S Sbjct: 187 EQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLGNRSKFLQVHAS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + + E + TV ++T+ A E+K ++ + + + A YGLK VE+A Sbjct: 247 SGHKYSLKEALCDPTVLARLSDTKAAGEVKALDDSYKMLQHEPDRAFYGLKQVEKANEAM 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A+DTLL+ DEL + D R R +++ + V + SS H G++L L G+AAIL Sbjct: 307 AIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLTGVAAIL 366 Query: 352 RFKI 355 RF + Sbjct: 367 RFPV 370 >gb|AAG22574.1| (AF139828) PELOTA [Homo sapiens] >gi|10764130|gb|AAG22575.1|AF143952_1 (AF143952) PELOTA [Homo sapiens] Length = 385 Score = 157 bits (393), Expect = 2e-37 Identities = 112/364 (30%), Positives = 185/364 (50%), Gaps = 16/364 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 EK G+V L E +D+WH Y+++ GD + A T+RK Q S + L + Sbjct: 9 EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRK-VQTESSTGSVGSNRVRTTLTL 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E I+ A QLRV G + + + V +G YHTI +EP T+ K++W S +ERI+ Sbjct: 68 CVEAIDFDSQACQLRVKGTNIQEN-EYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIE 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRY-NVKREDEE-KKFF 183 +A + + V V M++G A + +V A + NI KR N + D ++F+ Sbjct: 127 QACDPAWSDDVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDD--------TS 235 V + I+ I + V+ ++VA PGF +E F ++ + + K++L++ S Sbjct: 187 EQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHAS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + + E + TV ++T+ A E+K ++ + + + A YGLK VE+A Sbjct: 247 SGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAM 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A+DTLL+ DEL + D R R +++ + V + SS H G++L L G+AAIL Sbjct: 307 AIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVYGEQLSQLTGVAAIL 366 Query: 352 RFKI 355 RF + Sbjct: 367 RFPV 370 >pir||F72564 probable DOM34 APE1800 - Aeropyrum pernix (strain K1) >gi|5105490|dbj|BAA80803.1| (AP000062) 344aa long hypothetical DOM34 [Aeropyrum pernix] Length = 344 Score = 150 bits (376), Expect = 2e-35 Identities = 100/350 (28%), Positives = 181/350 (51%), Gaps = 20/350 (5%) Query: 13 VKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKINL 72 ++L+ E+ +DLW L + PGD+V +T R S + E + + L +R + I Sbjct: 1 MRLRPESEEDLWLLRITLRPGDVVRIRTSRDVPVGSG-----RKERVVMTLRIRLDSIEF 55 Query: 73 HRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKER-WRSHHVERIKEAVEAS 131 F +LR++G +V + G+ H+ AV G + +++++ W +ER+ AS Sbjct: 56 QPFTGKLRISGIVVEGPDEFGVKGRRHSTAVSIGTWLVVERDKGWSEQELERL-----AS 110 Query: 132 KRAK--VMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEKKFFHDVAKT 189 RA+ +I A++ E +A++ +G+ + + GK + RE E +K+ AK Sbjct: 111 GRARGTAVIAAVDYDEFALAVLAGHGMKILEDTSARLPGKD-DPSREQEVEKYVDRAAKR 169 Query: 190 IKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRVGVYEVIKRG 249 I + R ++AGPG K + ++ P L KV DTSMGG GV E ++R Sbjct: 170 IVEEAARHRSPIAVIAGPGQLKTSVAEKVQRAMPSL--KVATVDTSMGGVAGVREALRRE 227 Query: 250 TVDKVYTETRVAQEIKLVEKVIERIAKD-EPVAYGLKDVEEAVNYGAVDTLLVLDELLKG 308 +V ++ E + + ++E+ + RIAK + VAY +V GAVDT+L++D LL Sbjct: 228 SVTRILRELSIVEAEGVLEEFLRRIAKSRDTVAYTPGEVLAVARMGAVDTVLLVDTLLHS 287 Query: 309 DD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 D RE ++E + + ++ V+++ + G++L + GG+ A+LR+ + Sbjct: 288 PDDAVREAVDEALRLVESMGGRVIIIPGDSPAGERLVSFGGVIALLRYPV 337 >sp|P50444|YNU6_CAEEL HYPOTHETICAL 42.9 KDA PROTEIN R74.6 IN CHROMOSOME III >gi|7506795|pir||T24256 hypothetical protein R74.6 - Caenorhabditis elegans >gi|3879163|emb|CAA85277.1| (Z36238) Similar to the DOM34 protein of saccharomyces cerevisiae (Swiss Prot accession number P33309), contains similarity to Pfam domain: PF01605 (eRF1-like proteins), Score=463.8, E-value=4.7e-136, N=1 [Caenorhabditis elegans] Length = 381 Score = 146 bits (366), Expect = 3e-34 Identities = 110/362 (30%), Positives = 172/362 (47%), Gaps = 16/362 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 E+ G V L E +D+WH+Y++I GDI+ A T+RK + S + + L V Sbjct: 9 ERDGTGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSET-STGTTSSQRVHTMLTV 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E I+ A +L + G + D V LG YHTI +EP T+QK W S +ER+ Sbjct: 68 SVESIDFDPGAQELHLKGRNI-EENDIVKLGAYHTIDLEPNRKFTLQKTEWDSIDLERLN 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEE--KKFF 183 A++ ++ A V V + +G A V ++ A I I KR + E+ +KF+ Sbjct: 127 LALDPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEKGLEKFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFL--------RENYPELAGKVVLDDTS 235 V+ + + V+ VIVA GF K+ F L ++ E K +L +S Sbjct: 187 EAVSTAFMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKFMLTHSS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + + EV++ V +T+ E+K + + +E ++ + A YG V A Sbjct: 247 SGFKHALKEVLETPQVALRLADTKAQGEVKALNQFLELMSTEPDRAFYGFNHVNRANQEL 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A++TLLV D L + D R + ++E R V + SS H G++L L G AAIL Sbjct: 307 AIETLLVADSLFRAQDIETRRKYVRLVESVREQNGKVHIFSSMHVSGEQLAQLTGCAAIL 366 Query: 352 RF 353 RF Sbjct: 367 RF 368 >pir||T05870 cell division protein pelota - Arabidopsis thaliana >gi|3941543|gb|AAC82379.1| (AF069497) pelota [Arabidopsis thaliana] >gi|4469016|emb|CAB38277.1| (AL035602) pelota (PEL1) [Arabidopsis thaliana] >gi|7269619|emb|CAB81415.1| (AL161571) pelota (PEL1) [Arabidopsis thaliana] Length = 378 Score = 145 bits (363), Expect = 6e-34 Identities = 104/359 (28%), Positives = 182/359 (49%), Gaps = 16/359 (4%) Query: 11 GKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKI 70 G VK+ E DDLW+ Y++I+ GD V A T RK QR E + + L V+ E++ Sbjct: 14 GSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFRK-VQREIPGGGRDSERVKLKLEVQVEEV 72 Query: 71 NLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEA 130 + + + LR+ G + + + V +G +HT+ +E ++KE W S ++ +K+A + Sbjct: 73 DYDKDGSVLRIRGKNILEN-EHVKIGAFHTLELELKRPFVLRKEMWDSMALDTLKQASDP 131 Query: 131 SKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKR--YNVKREDEEKKFFHDVAK 188 + A + +V M++G A++ +V A I +I K E KKFF +V + Sbjct: 132 AASADLAVVLMQEGLAQIFLVGRSVTSSRARIETSIPRKHGPAIAGYESALKKFFENVLQ 191 Query: 189 TIKDLIERENVQKVIVAGPGFYKENFYGFL------RENYP--ELAGKVVLDDTSMGGRV 240 ++ V+ +VA PGF K+ F+ L R+ P E +++L T+ G R Sbjct: 192 AFVKHVDFSVVRCAVVASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTNSGYRH 251 Query: 241 GVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKD-EPVAYGLKDVEEAVNYGAVDTL 299 + EV+ V + +T+ A+E+K + ++ + + YG K VE A A+ TL Sbjct: 252 SLGEVLHAPNVMNMIKDTKAAKEVKALNDFHNMLSTEPDRACYGPKHVEVANERMAIQTL 311 Query: 300 LVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAILRFKI 355 L+ DEL + D R++ ++E ++ + + S+ H G++L L GIAA+LRF + Sbjct: 312 LITDELFRNSDVKTRKKYVNLVESVKDSGGDAFIFSAMHVSGEQLAQLTGIAALLRFPL 370 >gb|AAF52799.1| (AE003625) pelo gene product [Drosophila melanogaster] Length = 395 Score = 142 bits (355), Expect = 5e-33 Identities = 102/362 (28%), Positives = 183/362 (50%), Gaps = 16/362 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 +K +G V L E +D+WH Y++I+ GD V + T+RK Q + + L + Sbjct: 9 DKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRK-VQNETATGSSTSSRVRTTLTI 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E I+ A LR+ G + ++ V +G YHT+ +E ++K W + +ERI+ Sbjct: 68 AVESIDFDTQACVLRLKGRNIEENQY-VKMGAYHTLDLELNRKFELRKPEWDTIALERIE 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEE--KKFF 183 A + ++ A V V M++G A V ++ + I +I KR ++ E+ KF+ Sbjct: 127 MACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDD--------TS 235 V ++I + + V+ V++A PGF ++ FY ++ + ++ K++LD+ S Sbjct: 187 EQVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHAS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + + E+++ V ++T+ A E+K +E+ + + A YG K V +A Sbjct: 247 SGFKHSLREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQ 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A++TLL+ D L + D R+ ++E R+ V + SS H G++L L GIAA+L Sbjct: 307 AIETLLISDNLFRCQDVSLRKEYVNLVESIRDAGGEVKIFSSMHISGEQLAQLTGIAALL 366 Query: 352 RF 353 RF Sbjct: 367 RF 368 >sp|P48612|PELO_DROME PELOTA PROTEIN >gi|11279544|pir||T47122 cell division protein pelota [imported] - fruit fly (Drosophila melanogaster) >gi|973224|gb|AAC46879.1| (U27197) pelota [Drosophila melanogaster] Length = 395 Score = 142 bits (354), Expect = 7e-33 Identities = 101/362 (27%), Positives = 184/362 (49%), Gaps = 16/362 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 +K +G V L E +D+WH Y++I+ GD V + T+RK Q + + L + Sbjct: 9 DKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRK-VQNETATGSSTSSRVRTTLTI 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E I+ A +R+ G + ++ V +G YHT+ +E ++K W + +ERI+ Sbjct: 68 AVESIDFDTQACVVRLKGRNIEENQY-VKMGAYHTLDLELNRKFELRKPEWDTIALERIE 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEE--KKFF 183 A + ++ A V V M++G A V ++ + I +I KR ++ E+ KF+ Sbjct: 127 MACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDD--------TS 235 V ++I ++ + V+ V++A PGF ++ FY ++ + ++ K++LD+ S Sbjct: 187 EQVMQSILRHVDFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHAS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + + E+++ V ++T+ A E+K +E+ + + A YG K V +A Sbjct: 247 SGFKHSLREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQ 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A++TLL+ D L + D R+ ++E R+ V + SS H G++L L GIAA+L Sbjct: 307 AIETLLISDNLFRCQDVSLRKEYVNLVESIRDAGGEVKIFSSMHISGEQLAQLTGIAALL 366 Query: 352 RF 353 RF Sbjct: 367 RF 368 >pir||T45999 pelota-like protein - Arabidopsis thaliana >gi|6735351|emb|CAB68177.1| (AL137081) pelota-like protein [Arabidopsis thaliana] Length = 395 Score = 141 bits (352), Expect = 1e-32 Identities = 105/379 (27%), Positives = 180/379 (46%), Gaps = 39/379 (10%) Query: 11 GKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPE---------------- 54 G VK+ E DDLW+ Y++I P D V A T RK P Sbjct: 14 GSVKMMAEDSDDLWYTYNLIGPEDSVMAITFRKVGGEGRDSTPSLSRIESKYLGKKRSFT 73 Query: 55 KVEAIPVFLGVRAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKE 114 + E + + L V+ E+++ + + +R+ G + + + V +G +HT+ +E ++KE Sbjct: 74 RTERVKLKLEVQVEEVDYDKDGDVMRIRGKNIMEN-EHVRIGAFHTLEIELKRPFLLRKE 132 Query: 115 RWRSHHVERIKEAVEASKRAKVMIVAMEDGEAEVAI----VREYGLDFIASI--RHNIGG 168 W S ++ +K+A + + A + +V M++G A++ + V+ G SI +H G Sbjct: 133 NWDSLALDTLKQASDLAASADLAVVLMQEGLAQIFLAGKSVKSCGARIKTSIPWKHGAGT 192 Query: 169 KRYNVKREDEEKKFFHDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFL------RENY 222 Y E KKFF +V + ++ V+ ++A PGF K+ F+ L R+ Sbjct: 193 AGY----ESVLKKFFENVVQAFLKHVDFSVVRCAVIASPGFTKDQFHRHLLLEAERRQLR 248 Query: 223 PELAGK--VVLDDTSMGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKD-EP 279 P L K +L T+ G + + EV+ V + +T+ A+E+K + + D Sbjct: 249 PILENKSRFILVHTNSGYKHSLSEVLHDPNVMNMIKDTKAAKEVKALNDFFTMFSNDPNR 308 Query: 280 VAYGLKDVEEAVNYGAVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHE 336 YG K VE A A+ TLL++D L + D R++ + +E ++ V + SS H Sbjct: 309 ACYGPKHVEVAHERMAIQTLLIIDGLFRNSDVKTRKKYVDFVESVKDSGGEVFIFSSMHA 368 Query: 337 GGDKLKALGGIAAILRFKI 355 G++L GIAAILRF + Sbjct: 369 SGEQLAQHTGIAAILRFPL 387 >pir||T41199 dom34 protein homolog - fission yeast (Schizosaccharomyces pombe) >gi|5701961|emb|CAB52153.1| (AL109736) pelota protein/yeast dom34 homolog; probable involvement in meiotic and mitotic divisions [Schizosaccharomyces pombe] Length = 390 Score = 133 bits (332), Expect = 3e-30 Identities = 94/364 (25%), Positives = 173/364 (46%), Gaps = 16/364 (4%) Query: 6 EKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGV 65 EK G + + E +D+WHLY+++ GD + A T+R+ + + + + L + Sbjct: 9 EKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVV-KVGATGSTSGSRVVMKLRI 67 Query: 66 RAEKINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIK 125 E ++ A QL + G +V +G YHT+ +E T+ K W + ++R+ Sbjct: 68 LVENMDFDTKAAQLHIKGRTT-EYHPEVKMGSYHTLDLELHRNFTLYKNEWDAFALDRVD 126 Query: 126 EAVEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEE--KKFF 183 A S+ A++ V +++G A + ++ +Y I I KR ++ KF+ Sbjct: 127 AACNPSRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQKGLDKFY 186 Query: 184 HDVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPEL--------AGKVVLDDTS 235 V ++I + + ++ VI+A PGF Y ++ +L K V+ +S Sbjct: 187 DSVFQSINSEFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKFVILHSS 246 Query: 236 MGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYG 294 G + E++K V+ +T+ QEI+++ K + + +D+ A YG V +A G Sbjct: 247 TGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVLKAFELG 306 Query: 295 AVDTLLVLDELLKGDD---RERIEEIMEMARNLRANVVVVSSEHEGGDKLKALGGIAAIL 351 A+ LL+ D L + D R++ ++E + + V + SS HE G +L L GIAAIL Sbjct: 307 AIGELLISDSLFRSSDIATRKKWVSLVEGVKEINCPVYIFSSLHESGKQLDLLSGIAAIL 366 Query: 352 RFKI 355 + + Sbjct: 367 TYPV 370 >gi|6324327 Involved in protein translation; Dom34p [Saccharomyces cerevisiae] >gi|630177|pir||S45456 DOM34 protein - yeast (Saccharomyces cerevisiae) >gi|496711|emb|CAA54375.1| (X77114) ORF N2016 [Saccharomyces cerevisiae] >gi|1301812|emb|CAA95860.1| (Z71277) ORF YNL001w [Saccharomyces cerevisiae] Length = 386 Score = 109 bits (269), Expect = 6e-23 Identities = 86/363 (23%), Positives = 177/363 (48%), Gaps = 24/363 (6%) Query: 13 VKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEK-VEAIPVFLGVRAEKIN 71 + L E +DL+ +Y ++ D + K +K + D +K + + + + V +E + Sbjct: 18 ITLLPEDKEDLFTVYQIVDKDDELIFK--KKFTSKLDEAGKKKSTDLVKLKIKVISEDFD 75 Query: 72 LHRFANQLRVTGPIVY----ASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEA 127 + L+ G V AS D+P+GKY + ++ TI K+ + + + EA Sbjct: 76 MKD--EYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQKLLNEA 133 Query: 128 VEASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYN---VKREDEEKKFFH 184 ++ V +++G A V +V I +++ K+ +K +++ +KF+ Sbjct: 134 CNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLKFDEKTEKFYK 193 Query: 185 DVAKTIKDLIERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSM-------- 236 + +K + + ++ +I+ PGFY + + + E K +LD+ M Sbjct: 194 AIYSAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDNKGMFFIAHCST 253 Query: 237 GGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYGA 295 G G+ EV+K +T+ ++EI ++++ + + KD+ A YG K+V +A YGA Sbjct: 254 GYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWYGEKEVVKAAEYGA 313 Query: 296 VDTLLVLDELLKGDDRERIEEIMEMARNLRAN---VVVVSSEHEGGDKLKALGGIAAILR 352 + LL+ D++L D+ + EE +++ ++ +N +V+S+ H G++L L GIA IL+ Sbjct: 314 ISYLLLTDKVLHSDNIAQREEYLKLMDSVESNGGKALVLSTLHSLGEELDQLTGIACILK 373 Query: 353 FKI 355 + + Sbjct: 374 YPL 376 >sp|P33309|DO34_YEAST DOM34 PROTEIN >gi|295608|gb|AAA34575.1| (L11277) DOM34 [Saccharomyces cerevisiae] Length = 311 Score = 106 bits (262), Expect = 4e-22 Identities = 71/283 (25%), Positives = 144/283 (50%), Gaps = 15/283 (5%) Query: 88 ASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEASKRAKVMIVAMEDGEAE 147 AS D+P+GKY + ++ TI K+ + + + EA ++ V +++G A Sbjct: 19 ASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQKLLNEACNIEYKSDTAAVVLQEGIAH 78 Query: 148 VAIVREYGLDFIASIRHNIGGKRYN---VKREDEEKKFFHDVAKTIKDLIERENVQKVIV 204 V +V I +++ K+ +K +++ +KF+ + +K + + ++ +I+ Sbjct: 79 VCLVTSSSTILKQKIEYSMPKKKRTTDVLKFDEKTEKFYKAIYSAMKKDLNFDKLKTIIL 138 Query: 205 AGPGFYKENFYGFLRENYPELAGKVVLDDTSM--------GGRVGVYEVIKRGTVDKVYT 256 PGFY + + + E K +LD+ M G G+ EV+K Sbjct: 139 CSPGFYAKILMDKIFQYAEEEHNKKILDNKGMFFIAHCSTGYLQGINEVLKNPLYASKLQ 198 Query: 257 ETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYGAVDTLLVLDELLKGDDRERIE 315 +T+ ++EI ++++ + + KD+ A YG K+V +A YGA+ LL+ D++L D+ + E Sbjct: 199 DTKYSKEIMVMDEFLLHLNKDDDKAWYGEKEVVKAAEYGAISYLLLTDKVLHSDNIAQRE 258 Query: 316 EIMEMARNLRAN---VVVVSSEHEGGDKLKALGGIAAILRFKI 355 E +++ ++ +N +V+S+ H G++L L GIA IL++ + Sbjct: 259 EYLKLMDSVESNGGKALVLSTLHSLGEELDQLTGIACILKYPL 301 >emb|CAB06799.1| (Z86109) unknown [Saccharomyces pastorianus] Length = 386 Score = 99.8 bits (245), Expect = 4e-20 Identities = 84/362 (23%), Positives = 165/362 (45%), Gaps = 22/362 (6%) Query: 13 VKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKINL 72 + L +T DDL+ +Y +I D V K L ++ + R + + + L + + + ++ Sbjct: 18 ITLVPQTKDDLFTIYQIIDKEDEVIFKKLFT-TKKDEVNRKTSTDLVNLRLKILSYEFDI 76 Query: 73 HRFANQLRVTGPIVYASRD----DVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAV 128 LR G V + DVP+GK+ + +V TI K + + +KEA+ Sbjct: 77 KE--EYLRYKGVTVADDTNTANLDVPVGKFLSFSVTYEHQFTIFKHHFNKYAKRLLKEAL 134 Query: 129 EASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNV---KREDEEKKFFHD 185 E ++ V +++G + V ++ ++ K+ K ++ +KF+ Sbjct: 135 ELETKSDTAAVVLQEGISHVCLLTASSTILKQKTEISMPKKKDATDINKFNEKTEKFYRA 194 Query: 186 VAKTIKDLIERENVQKVIVAGPGFYKENF------YGFLRENYPELAGK--VVLDDTSMG 237 + + ++ +I+ PGFY + Y +N L + ++ S G Sbjct: 195 TYNAMMKNFNFDELRMIILCSPGFYAKALMEKILKYAEKEQNNSILENQEMFIIAHCSTG 254 Query: 238 GRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYGAV 296 G+ EV++ V T++ +EI++++ E + KD+ A YG ++++ A AV Sbjct: 255 YLQGITEVLRDPEYSTVLQNTKLIKEIQIMDDFFEHLNKDDNKAWYGKEEIKRAAKLEAV 314 Query: 297 DTLLVLDELLKGDDRERIEEIMEMARNLR---ANVVVVSSEHEGGDKLKALGGIAAILRF 353 +TLL+ D +LK DD + E +++ N+ V V S+ G++L L G+A IL++ Sbjct: 315 ETLLITDTVLKSDDIDERETFLDLTYNIEQSGGRVFVFSTLQSHGEELGRLKGLACILKY 374 Query: 354 KI 355 I Sbjct: 375 PI 376 >pir||F72501 translation releasing factor aRF-1 APE1988 [similarity] - Aeropyrum pernix (strain K1) >gi|5105686|dbj|BAA80998.1| (AP000063) 341aa long hypothetical eukaryotic peptide chain release factor subunit 1 [Aeropyrum pernix] Length = 341 Score = 83.9 bits (204), Expect = 3e-15 Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 40/337 (11%) Query: 41 LRKQAQRSDSLRPEKV-EAIPVFLGVRAEKINLHRFANQLRVTGP--IVYASRDDVPLGK 97 LR++ +D+++ ++ +A+ L +++ + L T P +V +D+ GK Sbjct: 20 LRQEYSITDNIKLKRTRQAVKRALSAAMDRLQM------LTSTPPNGLVLFCGEDMSTGK 73 Query: 98 YHTIAVEPGMTITIQKERWRSHHVERIKEAVEASKRAKVMIVAMEDGEAEVAIVREYGLD 157 + P I + R + E + A + I+ +E +A + +++ L+ Sbjct: 74 FECFMFSPPEPIRVFYYRTDKRFITDFLEDMVEDNNA-IGIIIVERDQATIGLLKGARLE 132 Query: 158 FIASI------RHNIGG---KRYNVKREDEEKKFFHDVAKTIKDLI----ERENVQKVIV 204 + + +H +GG +RY E +FF V + +L+ E+ ++ VIV Sbjct: 133 VLKELEGFVPGKHKMGGQSQRRYERIIEQMVDEFFKKVGEEASNLLVPLAEKGVLKGVIV 192 Query: 205 AGPGFYKENFYGFLRENYPELAGKVVLD----DTSMGGRVGVYEVIKRGTVDKVYTETRV 260 AGPG K+ F + NY + K +L D + G G+ E + + +KV Sbjct: 193 AGPGLAKQEF---VEGNYLDYRLKKILAPELVDVAYQGLQGLKEAVMKA--EKVVEAQMY 247 Query: 261 AQEIKLVEKVIERIAKDEP-VAYGLKDVEEAVNYGAVDTLLVLDELLKGDDRERIEEIME 319 + +E+ +AK + YG KDVE A+ GAV TLL+ + RE +EE +E Sbjct: 248 RDAVNAMEEFKLHLAKGTGMIVYGEKDVEAALEMGAVKTLLI------HESREDLEEWVE 301 Query: 320 MARNLRANVVVV-SSEHEGGDKLKALGGIAAILRFKI 355 A++ A V+VV S E LK GG+A ILRF+I Sbjct: 302 KAKSSGAQVIVVPESLAEAEWFLKTFGGLAGILRFRI 338 >pir||E75177 translation releasing factor aRF-1 PAB0396 - Pyrococcus abyssi (strain Orsay) >gi|5458010|emb|CAB49500.1| (AJ248284) peptide chain release factor aRF, subunit 1 [Pyrococcus abyssi] Length = 417 Score = 81.1 bits (197), Expect = 2e-14 Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 67/294 (22%) Query: 124 IKEAVEASKRAKVM--IVAMEDGEAEVAIVREYGLDFIASIRHNIGGK---------RYN 172 + E +E R K ++ +E EA + ++R ++ + + N+ GK RY Sbjct: 129 VTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVLDELTSNVPGKTRAGGQSARRYE 188 Query: 173 VKREDEEKKFFHDVA----KTIKDLIERENVQKVIVAGPGFYKENFY--GFLRENYPELA 226 RE E +F + + L+E+ ++ +IV GPG KE+F +L EL Sbjct: 189 RIREQETHEFMKRIGEHANRVFLPLLEKGELKGIIVGGPGPTKEDFVEGDYLHH---ELK 245 Query: 227 GKVV-LDDTSMGGRVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEPVA-YGL 284 K++ + D S G G+ E++++ + + + V +E KLV + ++ + KD +A YG Sbjct: 246 KKIIGVVDISYHGEYGLRELVEKAS--DILRDHEVIREKKLVNEFLKHVVKDTGLATYGE 303 Query: 285 KDVEEAVNYGAVDTLLVLD----------------ELLKGDDRERI-------------- 314 ++V A+ GAVDTLL+ + E LK E Sbjct: 304 REVRRALEIGAVDTLLISEGYDKVRVRAKCNHCGWEELKTMSEEEFEVYKKKLTRCPKCG 363 Query: 315 ------------EEIMEMARNLRANVVVVSSEHEGGDKL-KALGGIAAILRFKI 355 EE+++MA ++V ++S + E G + +A GG+ AILRFKI Sbjct: 364 SQNLTIEKWDVAEELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLGAILRFKI 417 >gi|11498819 peptide chain release factor eRF, subunit 1 [Archaeoglobus fulgidus] >gi|7443566|pir||C69402 translation releasing factor aRF-1 AF1220 - Archaeoglobus fulgidus >gi|2649371|gb|AAB90026.1| (AE001020) peptide chain release factor eRF, subunit 1 [Archaeoglobus fulgidus] Length = 407 Score = 76.5 bits (185), Expect = 4e-13 Identities = 83/309 (26%), Positives = 146/309 (46%), Gaps = 56/309 (18%) Query: 97 KYHTIAVEPGMTITIQKERWRSH-HVERIKEAVEASKRAKVMIVAMEDGEAEVAIV---R 152 K+ T +EP + + K S +++ +KE + K +++ ++ EA V ++ R Sbjct: 99 KHITEIIEPPEPVPLYKYHCDSKFYLDPLKEMLTEKKLYGLIV--LDRREATVGLLKGKR 156 Query: 153 EYGLDFIASI---RHNIGGK---RYNVKREDEEKKFFHDVAKTIKDLI--ERENVQKVIV 204 LD+ S+ +H GG+ R+ RE +F+ V + + + ++ + +++ Sbjct: 157 IEVLDWDTSMVPGKHRQGGQSSVRFERLREIAIHEFYKKVGEMASEALLPYKDKLIGILI 216 Query: 205 AGPGFYKENFYGFLRENYPELAGKVV-LDDTSMGGRVGVYEVIKRGTVDKVYTETRVAQE 263 GP KE FY ++ EL KV+ L D G+YE++++ V E + +E Sbjct: 217 GGPSPTKEEFYEGEYLHH-ELQKKVLGLFDVGYTDESGLYELVEKAK--DVLQEVDIIRE 273 Query: 264 IKLVEKVIERIAKDEPVAYGLKDVEEAVNYGAVDTLLVLDEL---------------LKG 308 L+++ ++ +A+D AYG ++V + GAVDTLL+ ++L ++ Sbjct: 274 KNLMQRFLKEVARDGLAAYGEEEVRRYIELGAVDTLLLSEDLRYERVKYRCPKCGKEVEV 333 Query: 309 DDRERIE----------------------EIMEMARNLRANVVVVSSEHEGGDKL-KALG 345 RE IE E+ E+A + A V +S+E E G+ L KA G Sbjct: 334 TVREGIEKPPFCEEDNVEMEEVERRDIVLELSELAESTGAKVEFLSTESEEGEMLYKAFG 393 Query: 346 GIAAILRFK 354 GIAAILRFK Sbjct: 394 GIAAILRFK 402 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.318 0.138 0.382 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 126378343 Number of Sequences: 2977 Number of extensions: 5237103 Number of successful extensions: 17350 Number of sequences better than 1.0e-10: 25 Number of HSP's better than 0.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 17249 Number of HSP's gapped (non-prelim): 26 length of query: 356 length of database: 189,106,746 effective HSP length: 59 effective length of query: 297 effective length of database: 153,796,013 effective search space: 45677415861 effective search space used: 45677415861 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.6 bits) S2: 165 (68.7 bits)