BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0500 (trxB) DE:thioredoxin reductase (trxB)
(345 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75116 thioredoxin reductase (trxb) PAB0500 - Pyrococcus ab... 697 0.0
pir||D71016 probable thioredoxin reductase - Pyrococcus horikosh... 633 0.0
sp|P80880|TRXB_BACSU THIOREDOXIN REDUCTASE (TRXR) (GENERAL STRES... 280 2e-74
dbj|BAB07290.1| (AP001519) thioredoxin reductase (NADPH) [Bacill... 279 3e-74
pir||H72322 thioredoxin reductase - Thermotoga maritima (strain ... 276 2e-73
gb|AAK42563.1| Thioredoxin reductase (trxB-3) [Sulfolobus solfat... 270 1e-71
pir||A75330 thioredoxin reductase - Deinococcus radiodurans (str... 262 4e-69
pir||F72705 probable thioredoxin reductase APE1061 - Aeropyrum p... 261 7e-69
sp|O32823|TRXB_LISMO THIOREDOXIN REDUCTASE (TRXR) >gi|2246749|gb... 259 3e-68
emb|CAB60740.1| (Y18636) thioredoxine reductase [Staphylococcus ... 253 3e-66
gi|11499149 thioredoxin reductase (trxB) [Archaeoglobus fulgidus... 252 6e-66
emb|CAC14297.1| (AJ276209) thioredoxin reductase [Clostridium st... 251 1e-65
pir||E69194 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Methano... 249 4e-65
sp|O83790|TRXB_TREPA THIOREDOXIN REDUCTASE >gi|7431888|pir||C712... 248 8e-65
pir||D35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Eubacte... 247 1e-64
sp|P50971|TRXB_EUBAC THIOREDOXIN REDUCTASE (TRXR) >gi|1353197|gb... 247 1e-64
emb|CAA11546.1| (AJ223781) thioredoxin reductase [Staphylococcus... 246 2e-64
sp|P52213|TRXB_CLOLI THIOREDOXIN REDUCTASE (TRXR) >gi|2117556|pi... 241 8e-63
sp|P23160|R34K_CLOPA 34.2 KD PROTEIN IN RUBREDOXIN OPERON (ORF A... 233 2e-60
emb|CAB82468.1| (Y14324) hypothetical protein [Staphylococcus au... 230 2e-59
sp|O30973|TRXB_MYCSM THIOREDOXIN REDUCTASE (TRXR) >gi|2511764|gb... 227 2e-58
pir||T36577 thioredoxin reductase (NADPH) - Streptomyces coelico... 227 2e-58
sp|P52215|TRXB_STRCO THIOREDOXIN REDUCTASE (TRXR) >gi|4376081|em... 226 2e-58
sp|P46843|TRXB_MYCLE BIFUNCTIONAL THIOREDOXIN REDUCTASE/THIOREDO... 225 5e-58
sp|Q9ZD97|TRXB_RICPR THIOREDOXIN REDUCTASE (TRXR) >gi|7431880|pi... 224 1e-57
sp|P52214|TRXB_MYCTU THIOREDOXIN REDUCTASE (TRXR) (TR) >gi|74318... 224 1e-57
emb|CAA07451.1| (AJ007313) thioredoxin reductase (NADPH) [Strept... 224 2e-57
emb|CAA65070.1| (X95798) thioredoxin [Mycobacterium tuberculosis] 223 2e-57
sp|Q05741|TRXB_STRCL THIOREDOXIN REDUCTASE >gi|1076065|pir||A533... 222 5e-57
pir||C83538 thioredoxin reductase 2 PA0849 [imported] - Pseudomo... 222 5e-57
emb|CAB61258.1| (AJ251005) putative thioredoxin reductase [Strep... 220 2e-56
sp|O82864|AHPF_PSEPU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi... 219 3e-56
gb|AAF82119.1|AF276071_3 (AF276071) NADH-peroxiredoxin reductase... 218 7e-56
sp|P57399|TRXB_BUCAI THIOREDOXIN REDUCTASE (TRXR) >gi|10038988|d... 217 2e-55
dbj|BAA25696.1| (AB010712) NADH oxidase/alkyl hydroperoxidase re... 217 2e-55
pir||JC2311 NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-... 217 2e-55
sp|P81433|TRXB_BUCAP THIOREDOXIN REDUCTASE (TRXR) >gi|2947035|gb... 216 3e-55
sp|O06465|AHPF_XANCH ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi... 215 6e-55
sp|P09625|TRXB_ECOLI THIOREDOXIN REDUCTASE (TRXR) >gi|66129|pir|... 213 2e-54
pdb|1TDE| Thioredoxin Reductase (E.C.1.6.4.5) (Wild Type) 213 2e-54
pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Red... 213 2e-54
sp|P43788|TRXB_HAEIN THIOREDOXIN REDUCTASE (TRXR) >gi|1075348|pi... 213 3e-54
pir||H82668 subunit F of alkyl hydroperoxide reductase XF1531 [i... 212 5e-54
gb|AAK42876.1| Thioredoxin reductase (trxB-2) [Sulfolobus solfat... 210 2e-53
pdb|1TRB| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With Cys ... 210 3e-53
pdb|1TDF| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With Cys ... 210 3e-53
pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thior... 210 3e-53
pir||E81845 thioredoxin reductase (NADPH) (EC 1.6.4.5) NMA1538 [... 209 3e-53
emb|CAC12113.1| (AL445066) probable thioredoxin reductase [Therm... 209 3e-53
pir||T42062 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Strepto... 209 4e-53
pir||C81097 thioredoxin reductase NMB1324 [imported] - Neisseria... 208 6e-53
pir||A49911 NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-... 208 8e-53
sp|P26829|DHNA_BACSP NADH DEHYDROGENASE (ALKYL HYDROPEROXIDE RED... 208 1e-52
sp|P42974|DHNA_BACSU NADH DEHYDROGENASE (ALKYL HYDROPEROXIDE RED... 208 1e-52
sp|Q9Z8M4|TRXB_CHLPN THIOREDOXIN REDUCTASE (TRXR) >gi|7431887|pi... 208 1e-52
gb|AAD29664.1|AF124757_24 (AF124757) thioredoxin reductase [Zymo... 208 1e-52
gb|AAD52148.1|AF129406_2 (AF129406) alkyl hydroperoxide reductas... 206 2e-52
pir||G64491 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Methano... 206 4e-52
pir||C82231 thioredoxin reductase VC1182 [imported] - Vibrio cho... 206 4e-52
pir||F83318 thioredoxin reductase 1 PA2616 [imported] - Pseudomo... 205 5e-52
pir||F82681 thioredoxin reductase XF1448 [imported] - Xylella fa... 205 9e-52
pir||D64794 alkyl hydroperoxide reductase (EC 1.6.4.-) F52A prot... 203 2e-51
pir||D83627 alkyl hydroperoxide reductase subunit F PA0140 [impo... 203 2e-51
sp|P35340|AHPF_ECOLI ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (AL... 203 2e-51
sp|P19480|AHPF_SALTY ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (AL... 200 2e-50
sp|P56431|TRXB_HELPY THIOREDOXIN REDUCTASE (TRXR) >gi|7427757|pi... 200 2e-50
sp|Q9ZL18|TRXB_HELPJ THIOREDOXIN REDUCTASE (TRXR) >gi|7431884|pi... 200 2e-50
sp|P51978|TRXB_NEUCR THIOREDOXIN REDUCTASE >gi|11253111|pir||T47... 199 3e-50
sp|O05204|AHPF_STAAU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi... 199 4e-50
pir||T00824 thioredoxin reductase homolog T32G6.20 - Arabidopsis... 199 4e-50
sp|P39916|TRXB_COXBU THIOREDOXIN REDUCTASE (TRXR) >gi|1075485|pi... 198 7e-50
gi|6320560 Thioredoxin reductase; Trr1p [Saccharomyces cerevisia... 198 9e-50
sp|P47348|TRXB_MYCGE THIOREDOXIN REDUCTASE (TRXR) >gi|1361862|pi... 198 9e-50
pir||F82936 thioredoxin reductase UU074 [imported] - Ureaplasma ... 198 9e-50
gi|6321898 mitochondrial thioredoxin reductase; Trr2p [Saccharom... 198 1e-49
sp|Q92375|TRXB_SCHPO THIOREDOXIN REDUCTASE >gi|7493475|pir||T403... 195 7e-49
sp|P75531|TRXB_MYCPN THIOREDOXIN REDUCTASE (TRXR) >gi|2146661|pi... 192 5e-48
pir||B81432 thioredoxin reductase (NADPH) (EC 1.6.4.5) Cj0146c [... 192 5e-48
pir||B71556 probable thioredoxin reductase - Chlamydia trachomat... 191 8e-48
sp|O84101|TRXB_CHLTR THIOREDOXIN REDUCTASE (TRXR) 191 8e-48
sp|P94284|TRXB_BORBU THIOREDOXIN REDUCTASE (TRXR) >gi|7427755|pi... 191 1e-47
sp|O66790|TRXB_AQUAE THIOREDOXIN REDUCTASE (TRXR) >gi|7427756|pi... 191 1e-47
gb|AAG19616.1| (AE005050) thioredoxin; TrxB2 [Halobacterium sp. ... 191 1e-47
pdb|1VDC| Structure Of Nadph Dependent Thioredoxin Reductase 190 1e-47
pir||T41743 thioredoxin reductase (NADPH) (EC 1.6.4.5) 2 - Arabi... 190 2e-47
gb|AAB86519.1| (AC002329) putative thioredoxin reductase [Arabid... 187 1e-46
gb|AAB41020.1| (U82978) thioredoxin reductase [Borrelia burgdorf... 186 3e-46
pir||C81710 thioredoxin reductase frameshift TC0375 [imported] -... 186 4e-46
pir||S44027 thioredoxin reductase (NADPH) (EC 1.6.4.5) 2 [valida... 185 6e-46
sp|Q39243|TRB1_ARATH THIOREDOXIN REDUCTASE 1 (NADPH-DEPENDENT TH... 178 8e-44
gb|AAA64747.1| (U10274) thioredoxin reductase [Saccharomyces cer... 177 2e-43
sp|P43496|TRXB_PENCH THIOREDOXIN REDUCTASE >gi|1078637|pir||B498... 175 7e-43
sp|Q39242|TRB2_ARATH THIOREDOXIN REDUCTASE 2 (NADPH-DEPENDENT TH... 166 5e-40
emb|CAA56112.1| (X79603) disulphide oxidoreductase [Entamoeba hi... 148 7e-35
emb|CAB93736.1| (AL357613) putative thioredoxin reductase. [Stre... 148 9e-35
dbj|BAB07127.1| (AP001518) thioredoxin reductase [Bacillus halod... 138 7e-32
gi|10803602 trxB [Halobacterium sp. NRC-1] >gi|10803701|ref|NP_0... 138 1e-31
gb|AAK42391.1| Thioredoxin reductase (trxB-1) [Sulfolobus solfat... 136 4e-31
emb|CAB57297.1| (AJ243598) NADH oxidase [Sulfolobus solfataricus] 134 2e-30
pir||B70015 thioredoxin reductase homolog yumC - Bacillus subtil... 125 9e-28
pir||G69759 thioredoxin reductase homolog ycgT - Bacillus subtil... 121 1e-26
pir||D72383 NADH oxidase - Thermotoga maritima (strain MSB8) >gi... 106 3e-22
pir||D71655 thioredoxin reductase (trxB2) RP514 - Rickettsia pro... 103 4e-21
dbj|BAA21091.1| (D86223) glutamate synthase [Pyrococcus sp.] 101 1e-20
pir||D72382 hypothetical protein TM0395 - Thermotoga maritima (s... 101 2e-20
pir||T35296 probable dihydrolipoamide dehydrogenase - Streptomyc... 96 8e-19
dbj|BAB04498.1| (AP001509) dihydrolipoamide dehydrogenase [Bacil... 95 1e-18
pir||C75218 probable monooxygenase PAB0184 - Pyrococcus abyssi (... 92 7e-18
gb|AAD17483.1| (AF047034) dihydrolipoamide dehydrogenase [Strept... 92 1e-17
pir||T44300 probable pyridine nucleotide-disulfide oxidoreductas... 91 2e-17
sp|P75393|DLDH_MYCPN DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONEN... 88 2e-16
pir||A82753 dihydrolipoamide dehydrogenase XF0868 [imported] - X... 86 7e-16
sp|Q04829|DLDH_HALVO DIHYDROLIPOAMIDE DEHYDROGENASE >gi|1076150|... 85 9e-16
pir||B75252 conserved hypothetical protein - Deinococcus radiodu... 85 9e-16
pir||D71076 probable glutamate synthase small chain - Pyrococcus... 85 1e-15
pir||C75144 sarcosine oxidase, chain alpha (soxa) PAB0212 - Pyro... 83 4e-15
pir||F72254 hypothetical protein TM1433 - Thermotoga maritima (s... 83 6e-15
emb|CAB61613.1| (AL133210) putative reductase [Streptomyces coel... 82 8e-15
gi|11499442 NADH oxidase (noxA-5) [Archaeoglobus fulgidus] >gi|7... 82 1e-14
dbj|BAA08961.1| (D50453) homologue of thioredoxin reductase of M... 81 2e-14
emb|CAB51948.1| (AJ243915) thioredoxin reductase [Staphylococcus... 81 2e-14
sp|P48641|GSHR_ARATH GLUTATHIONE REDUCTASE, CYTOSOLIC (GR) (GRAS... 80 5e-14
sp|P08663|MERA_STAAU MERCURIC REDUCTASE (HG(II) REDUCTASE) >gi|7... 79 7e-14
dbj|BAB05212.1| (AP001512) reductase [Bacillus halodurans] 79 7e-14
pir||H71183 probable D-nopaline dehydrogenase - Pyrococcus horik... 78 1e-13
pir||A70477 glutamate synthase small subunit gltD - Aquifex aeol... 78 1e-13
sp|P47513|DLDH_MYCGE DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONEN... 77 3e-13
gi|6321091 dihydrolipoamide dehydrogenase precursor (mature prot... 77 3e-13
sp|Q43154|GSHC_SPIOL GLUTATHIONE REDUCTASE, CHLOROPLAST PRECURSO... 77 3e-13
pir||G71641 dihydrolipoamide dehydrogenase (pdhD) RP805 - Ricket... 76 7e-13
sp|P06715|GSHR_ECOLI GLUTATHIONE REDUCTASE (GR) (GRASE) >gi|6612... 76 7e-13
pir||A82353 glutathione reductase VC0186 [imported] - Vibrio cho... 75 1e-12
emb|CAC11354.1| (AL445063) dihydrolipoamide dehydrogenase compon... 75 2e-12
gb|AAG20413.1| (AE005114) thioredoxin reductase; TxrB3 [Halobact... 75 2e-12
gb|AAK42805.1| Mercuric reductase (Hg(II) reductase) (merA) [Sul... 74 2e-12
sp|O50311|DLDH_CHLVI DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONEN... 74 2e-12
emb|CAA70224.1| (Y09024) mercuric reductase [Bacillus cereus] 74 2e-12
pdb|1GES|B Chain B, Glutathione Reductase (E.C.1.6.4.2) Nad Muta... 73 4e-12
sp|P48639|GSHR_BURCE GLUTATHIONE REDUCTASE (GR) (GRASE) >gi|2120... 73 6e-12
emb|CAC13956.1| (AJ400816) glutathione reductase [Mesembryanthem... 71 2e-11
dbj|BAA22375.1| (D86491) Nfrl [Xenopus laevis] 70 3e-11
gb|AAD12483.1| (U02197) Homology to thioredoxin reductase M60116... 69 1e-10
pir||S76954 probable thioredoxin reductase (NADPH) (EC 1.6.4.5) ... 69 1e-10
>pir||D75116 thioredoxin reductase (trxb) PAB0500 - Pyrococcus abyssi (strain
Orsay) >gi|5458156|emb|CAB49645.1| (AJ248285)
thioredoxin reductase (trxB) [Pyrococcus abyssi]
Length = 345
Score = 697 bits (1779), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MLLNIHQESYVEVVKMFSLGGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTII 60
MLLNIHQESYVEVVKMFSLGGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTII
Sbjct: 1 MLLNIHQESYVEVVKMFSLGGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTII 60
Query: 61 ITKDLGGNMAITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAY 120
ITKDLGGNMAITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAY
Sbjct: 61 ITKDLGGNMAITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAY 120
Query: 121 YEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGK 180
YEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGK
Sbjct: 121 YEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGK 180
Query: 181 EVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEI 240
EVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEI
Sbjct: 181 EVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEI 240
Query: 241 RGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRT 300
RGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRT
Sbjct: 241 RGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRT 300
Query: 301 KVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIESWNGKSIE 345
KVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIESWNGKSIE
Sbjct: 301 KVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIESWNGKSIE 345
>pir||D71016 probable thioredoxin reductase - Pyrococcus horikoshii
>gi|3257849|dbj|BAA30532.1| (AP000006) 336aa long
hypothetical thioredoxin reductase [Pyrococcus
horikoshii]
Length = 336
Score = 633 bits (1615), Expect = 0.0
Identities = 313/336 (93%), Positives = 325/336 (96%), Gaps = 1/336 (0%)
Query: 11 VEVVKMFSLGG-LGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNM 69
+EV +MFSLGG LG+S+VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNM
Sbjct: 1 MEVKEMFSLGGGLGRSKVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNM 60
Query: 70 AITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEV 129
AITDLIENYPGFPEGISGSEL+K+MY+ VKKYGV+VI DEV+RIDPAECAYYEGPC F V
Sbjct: 61 AITDLIENYPGFPEGISGSELSKKMYDQVKKYGVEVIIDEVIRIDPAECAYYEGPCNFVV 120
Query: 130 KTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGN 189
KTANGKEYK KTIIIAVGAEPRKL+VPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGN
Sbjct: 121 KTANGKEYKAKTIIIAVGAEPRKLNVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGN 180
Query: 190 TALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESV 249
TALQEALYLHSIGVKVTLVHRRDKFRADKILQDR KQAGIP ILNTVVTEI+GTNKVESV
Sbjct: 181 TALQEALYLHSIGVKVTLVHRRDKFRADKILQDRFKQAGIPAILNTVVTEIKGTNKVESV 240
Query: 250 VLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAG 309
VLKNVKTGET EKKVDGVFIFIGYEPKTDFVKHLGITDEYGYI VDMYMRTKVPGIFAAG
Sbjct: 241 VLKNVKTGETVEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIPVDMYMRTKVPGIFAAG 300
Query: 310 DITNVFKQIAVAVGQGAIAANSAKEFIESWNGKSIE 345
DITNVFKQIAVAVGQGAIAANSAKEFIESWNGK+IE
Sbjct: 301 DITNVFKQIAVAVGQGAIAANSAKEFIESWNGKTIE 336
>sp|P80880|TRXB_BACSU THIOREDOXIN REDUCTASE (TRXR) (GENERAL STRESS PROTEIN 35) (GSP35)
>gi|7427754|pir||A69727 thioredoxin reductase (NADPH)
(EC 1.6.4.5) - Bacillus subtilis
>gi|1945648|emb|CAB08055.1| (Z94043) hypothetical
protein [Bacillus subtilis] >gi|2635992|emb|CAB15484.1|
(Z99121) thioredoxin reductase [Bacillus subtilis]
Length = 316
Score = 280 bits (709), Expect = 2e-74
Identities = 153/315 (48%), Positives = 205/315 (64%), Gaps = 13/315 (4%)
Query: 27 VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGI 85
+ E K++DVIIIGAGPAG TAA+Y +R L T++I + + GG MA T+ +ENYPGF E I
Sbjct: 1 MSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDVENYPGF-ESI 59
Query: 86 SGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
G EL+ +M+EH KK+G + + ++ + + +++V A KEYK + +IIA
Sbjct: 60 LGPELSNKMFEHAKKFGAEYAYGDIKEVIDGK--------EYKVVKAGSKEYKARAVIIA 111
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
GAE +K+ VPGEKE GRGVSYCA CDG F GKE++VVGGG++A++E +YL KV
Sbjct: 112 AGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVVVGGGDSAVEEGVYLTRFASKV 171
Query: 206 TLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKK 263
T+VHRRDK RA ILQ R + + N V EI N KV +V L + TGE E K
Sbjct: 172 TIVHRRDKLRAQSILQARAFDNEKVDFLWNKTVKEIHEENGKVGNVTLVDTVTGEESEFK 231
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAV 322
DGVFI+IG P + ++LGIT+E GYI+ + M TKV GIFAAGDI +QI A
Sbjct: 232 TDGVFIYIGMLPLSKPFENLGITNEEGYIETNDRMETKVEGIFAAGDIREKSLRQIVTAT 291
Query: 323 GQGAIAANSAKEFIE 337
G G+IAA S + ++E
Sbjct: 292 GDGSIAAQSVQHYVE 306
>dbj|BAB07290.1| (AP001519) thioredoxin reductase (NADPH) [Bacillus halodurans]
Length = 315
Score = 279 bits (707), Expect = 3e-74
Identities = 150/315 (47%), Positives = 209/315 (65%), Gaps = 15/315 (4%)
Query: 28 DESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGIS 86
+E KV+DV+I GAGPAG TAA+Y +R L T+++ + + GG MA T+ +ENYPGF + I
Sbjct: 3 EEQKVYDVVIAGAGPAGMTAAVYTSRANLSTVMVERGVPGGQMANTEDVENYPGF-DHIL 61
Query: 87 GSELAKRMYEHVKKYGVDVIFDEVVRI-DPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
G EL+ +M+EH KK+G + + ++ I D + ++ A KEYK + +I+A
Sbjct: 62 GPELSTKMFEHAKKFGAEYAYGDIKEIIDQGD---------LKLVKAGNKEYKARAVIVA 112
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
GAE +KL VPGEKE +GRGVSYCA CDG F GKE++VVGGG++A++EA+YL KV
Sbjct: 113 TGAEYKKLGVPGEKELSGRGVSYCAVCDGAFFKGKELVVVGGGDSAVEEAVYLTRFASKV 172
Query: 206 TLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKK 263
T++HRRD+ RA KILQ R I I + VV +I GT+ KV SV +++ KTGE + K
Sbjct: 173 TIIHRRDQLRAQKILQQRAFDNDKIEFIWDHVVKQINGTDGKVSSVTIEHAKTGEQQDFK 232
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAV 322
DGVFI+IG P + VK+L I ++ GYI + M T VPGIFAAGD+ +QI A
Sbjct: 233 TDGVFIYIGMLPLNEAVKNLNILNDEGYIVTNEEMETSVPGIFAAGDVREKSLRQIVTAT 292
Query: 323 GQGAIAANSAKEFIE 337
G G++AA + + +IE
Sbjct: 293 GDGSLAAQNVQHYIE 307
>pir||H72322 thioredoxin reductase - Thermotoga maritima (strain MSB8)
>gi|4981404|gb|AAD35951.1|AE001753_7 (AE001753)
thioredoxin reductase [Thermotoga maritima]
Length = 317
Score = 276 bits (699), Expect = 2e-73
Identities = 149/319 (46%), Positives = 206/319 (63%), Gaps = 13/319 (4%)
Query: 17 FSLGGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLI 75
F G L K + + +D++++G GPAG T+AIYA R GL +++ K + GG + +T L+
Sbjct: 4 FDTGSLKKKEIKDK--YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLV 61
Query: 76 ENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGK 135
ENYPGFP ISG ELA + EH +K+G D+ EVV+++ +G + V+ +GK
Sbjct: 62 ENYPGFP-AISGEELASKFKEHAEKFGADIYNAEVVKLE------VQGDKKV-VELDDGK 113
Query: 136 EYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEA 195
+ +I+A GA P+KL+VPGEKEF G+GVSYCATCDG LF GK+VIVVGGG++A E+
Sbjct: 114 RIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFAGKDVIVVGGGDSACDES 173
Query: 196 LYLHSIGVKVTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNV 254
++L +I K+T++ + A K+LQ+R L I I N+ V EIRG +KVE VV++NV
Sbjct: 174 IFLSNIVNKITMIQLLETLTAAKVLQERVLNNPKIEVIYNSTVREIRGKDKVEEVVIENV 233
Query: 255 KTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV 314
KTGET K DGVFIFIG +P + ++ L D YGY+ D M T V GI+A GD+
Sbjct: 234 KTGETKVLKADGVFIFIGLDPNSKLLEGLVELDPYGYVITDENMETSVKGIYAVGDVRKK 293
Query: 315 -FKQIAVAVGQGAIAANSA 332
+QI AV GAIA A
Sbjct: 294 NLRQIVTAVADGAIAVEHA 312
>gb|AAK42563.1| Thioredoxin reductase (trxB-3) [Sulfolobus solfataricus]
Length = 323
Score = 270 bits (684), Expect = 1e-71
Identities = 146/321 (45%), Positives = 207/321 (64%), Gaps = 13/321 (4%)
Query: 27 VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGIS 86
V + +DVII+G GPA Y AA+Y+AR+ L T++I + GG + ++++Y G E I
Sbjct: 10 VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIE-IQ 68
Query: 87 GSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAV 146
S++ K +H++KY V V+ D V +I+ +F VKT E+K ++I+ +
Sbjct: 69 ASDMIKVFNKHIEKYEVPVLLDIVEKIE-------NRGDEFVVKTKRKGEFKADSVILGI 121
Query: 147 GAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
G + RKL VPGE+EF GRG+SYC+ CD PLF + V V+GGG++AL+ A L S KV
Sbjct: 122 GVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVY 181
Query: 207 LVHRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVD 265
L+HRRD F+A I + + K+ + +LN+VV EI+G V+ VV++N+KTGE E V+
Sbjct: 182 LIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVN 241
Query: 266 GVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGDITNV---FKQIAVA 321
GVFI IG++P TDF K GI TD GYIKVD +MRT VPG+FAAGD T+ F+Q+ A
Sbjct: 242 GVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITA 301
Query: 322 VGQGAIAANSAKEFIESWNGK 342
V QGA+AA SA ++ GK
Sbjct: 302 VAQGAVAATSAYRYVTEKKGK 322
>pir||A75330 thioredoxin reductase - Deinococcus radiodurans (strain R1)
>gi|6459771|gb|AAF11534.1|AE002036_5 (AE002036)
thioredoxin reductase [Deinococcus radiodurans]
Length = 325
Score = 262 bits (663), Expect = 4e-69
Identities = 138/300 (46%), Positives = 198/300 (66%), Gaps = 7/300 (2%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
+DV+IIG GPAG TAAIY R L T+I+ K + GG +A ++ +EN+PGFPE I+G ELA
Sbjct: 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELA 68
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+RM++ +K+G V DEV + ++ P F V+ NG EY+ K +I+A GA+PR
Sbjct: 69 QRMHQQAEKFGAKVEMDEVQGVQHDATSH---PYPFTVRGYNG-EYRAKAVILATGADPR 124
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
KL +PGE F G+GVS CATCDG + GK+V+V+GGG+ A++E ++L +VT++HRR
Sbjct: 125 KLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRR 184
Query: 212 DKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
D RA+K+ Q R + I +T V EI+G + V V L+N+KTGE E DGVFIF
Sbjct: 185 DTLRANKVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIF 244
Query: 271 IGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAIAA 329
IG+ P T FVK + GY+ V + T +P +FAAGD+++ +++Q+A +VG G AA
Sbjct: 245 IGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAA 304
>pir||F72705 probable thioredoxin reductase APE1061 - Aeropyrum pernix (strain
K1) >gi|5104731|dbj|BAA80046.1| (AP000060) 343aa long
hypothetical thioredoxin reductase [Aeropyrum pernix]
Length = 343
Score = 261 bits (661), Expect = 7e-69
Identities = 143/332 (43%), Positives = 212/332 (63%), Gaps = 14/332 (4%)
Query: 13 VVKMFSLGGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAIT 72
V+ L + ++ + +D +I+GAGPAG +AAIY RF + T+I++ D+GG + +T
Sbjct: 5 VIMPLRLSAVRAPKIPRGEEYDTVIVGAGPAGLSAAIYTTRFLMSTLIVSMDVGGQLNLT 64
Query: 73 DLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFD-EVVRIDPAECAYYEGPCQFEVKT 131
+ I++YPG G+ S+L + H + +G ++ +V +D + + F V+
Sbjct: 65 NWIDDYPGMG-GLEASKLVESFKSHAEMFGAKIVTGVQVKTVDRLDDGW------FLVRG 117
Query: 132 ANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKE-VIVVGGGNT 190
+ G E K +T+I+AVG+ RKL VPGE E GRGVSYC+ CD PLF GK+ V+VVGGG++
Sbjct: 118 SRGLEVKARTVILAVGSRRRKLGVPGEAELAGRGVSYCSVCDAPLFKGKDAVVVVGGGDS 177
Query: 191 ALQEALYLHSIGVKVTLVHRRDKFRADKI-LQDRLKQAGIPTILNTVVTEIRGTNKVESV 249
AL+ AL L KV LVHRR FRA +++ K+ I IL+++VTEIRG ++VESV
Sbjct: 178 ALEGALLLSGYVGKVYLVHRRQGFRAKPFYVEEARKKPNIEFILDSIVTEIRGRDRVESV 237
Query: 250 VLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAA 308
V+KN TGE E +VDG+FI IG EP + + +G+ TD G + VD +MRT +PGIFAA
Sbjct: 238 VVKNKVTGEEKELRVDGIFIEIGSEPPKELFEAIGLETDSMGNVVVDEWMRTSIPGIFAA 297
Query: 309 GDITNV---FKQIAVAVGQGAIAANSAKEFIE 337
GD T++ F+Q+ A GA+AA SA +++
Sbjct: 298 GDCTSMWPGFRQVVTAAAMGAVAAYSAYTYLQ 329
>sp|O32823|TRXB_LISMO THIOREDOXIN REDUCTASE (TRXR) >gi|2246749|gb|AAB63804.1| (AF009622)
thioredoxin reductase [Listeria monocytogenes]
Length = 319
Score = 259 bits (656), Expect = 3e-68
Identities = 144/313 (46%), Positives = 194/313 (61%), Gaps = 13/313 (4%)
Query: 29 ESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISG 87
E K++DVIIIGAGPAG TAA+Y +R LDT++I + + GG M T +ENYPGF + I G
Sbjct: 4 EEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQMVNTAEVENYPGF-DSILG 62
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVG 147
+L+ +M K++G + + ++ + + +F+ TA K YK + IIIA G
Sbjct: 63 PDLSDKMLSGAKQFGAEYAYGDIKEVVDGK--------EFKTVTAGSKTYKARAIIIATG 114
Query: 148 AEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTL 207
AE RKL GE+E +GRGVSYCA CDG F +E+IVVGGG++A++E YL KVT+
Sbjct: 115 AEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVEEGTYLTRYADKVTI 174
Query: 208 VHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEKKVD 265
VHRRDK RA +ILQDR K + I N+ V EI G KV L + G VD
Sbjct: 175 VHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKLVSTVDGSESIMPVD 234
Query: 266 GVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQ 324
GVFI++G P T +LGITD+ GYI D MRT +PGIFAAGD+ +QI A G
Sbjct: 235 GVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGD 294
Query: 325 GAIAANSAKEFIE 337
G +A +A++++E
Sbjct: 295 GGLAGQNAQKYVE 307
>emb|CAB60740.1| (Y18636) thioredoxine reductase [Staphylococcus aureus]
Length = 311
Score = 253 bits (639), Expect = 3e-66
Identities = 143/315 (45%), Positives = 197/315 (62%), Gaps = 13/315 (4%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
+D+ IIGAGPAG TAA+YA+R L T++I + + GG MA T+ +EN+PGF E I+G +L+
Sbjct: 6 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGF-EMITGPDLS 64
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+M+EH KK+G + ++ + E +++V KE K +IIA GAE +
Sbjct: 65 TKMFEHAKKFGAVYQYGDIKSV--------EDKGEYKVINFGNKELTAKAVIIATGAEYK 116
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
K+ VPGE+E GRGVSYCA CDG F K + V+GGG++A++E +L KVT+VHRR
Sbjct: 117 KIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 176
Query: 212 DKFRADKILQDR-LKQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKKVDGVFI 269
D+ RA +ILQDR K I I + + I + KV SV L + K G + DGVFI
Sbjct: 177 DELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFI 236
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGAIA 328
+IG +P T K LGIT++ GYI M T VPGIFAAGD+ + +QI A G G+IA
Sbjct: 237 YIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIA 296
Query: 329 ANSAKEFIESWNGKS 343
A SA E+IE N ++
Sbjct: 297 AQSAAEYIEHLNDQA 311
>gi|11499149 thioredoxin reductase (trxB) [Archaeoglobus fulgidus]
>gi|7427758|pir||A69444 thioredoxin reductase (NADPH)
(EC 1.6.4.5) - Archaeoglobus fulgidus
>gi|2649006|gb|AAB89692.1| (AE000995) thioredoxin
reductase (trxB) [Archaeoglobus fulgidus]
Length = 300
Score = 252 bits (636), Expect = 6e-66
Identities = 141/310 (45%), Positives = 191/310 (61%), Gaps = 13/310 (4%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENYPGFPEGISGSEL 90
++DV IIG GPAG TAA+Y+AR+GL T+ T D +++ IENYPGF EG SG EL
Sbjct: 1 MYDVAIIGGGPAGLTAALYSARYGLKTVFFETVDPVSQLSLAAKIENYPGF-EG-SGMEL 58
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
++M E K G + ++V R++ + A G EY+ K II+A G +
Sbjct: 59 LEKMKEQAVKAGAEWKLEKVERVERNGETF--------TVIAEGGEYEAKAIIVATGGKH 110
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
++ + GE F GRGVSYCATCDG F GK+VIV G G A+++A+YLH IG +VT+V R
Sbjct: 111 KEAGIEGESAFIGRGVSYCATCDGNFFRGKKVIVYGSGKEAIEDAIYLHDIGCEVTIVSR 170
Query: 211 RDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
FRA+K L + +++ GIP +T + +I G+ KVE VV N + E FE + DG+F+
Sbjct: 171 TPSFRAEKALVEEVEKRGIPVHYSTTIRKIIGSGKVEKVVAYNREKKEEFEIEADGIFVA 230
Query: 271 IGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGD-ITNVFKQIAVAVGQGAIA 328
IG P TD V LG+ D GYIKVD RT V G+FAAGD N KQ+ A G GA+A
Sbjct: 231 IGMRPATDVVAELGVERDSMGYIKVDKEQRTNVEGVFAAGDCCDNPLKQVVTACGDGAVA 290
Query: 329 ANSAKEFIES 338
A SA +++ S
Sbjct: 291 AYSAYKYLTS 300
>emb|CAC14297.1| (AJ276209) thioredoxin reductase [Clostridium sticklandii]
Length = 314
Score = 251 bits (634), Expect = 1e-65
Identities = 139/317 (43%), Positives = 189/317 (58%), Gaps = 17/317 (5%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKD-LGGNMAITDLIENYPGFPEGISGS 88
SK++D++IIGAGPAG +A +Y AR + T+II KD GG + T+ + NYPG SG
Sbjct: 2 SKIYDLVIIGAGPAGLSAGLYGARGKMSTLIIEKDKTGGQIVTTEEVANYPGSIHDASGP 61
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
L RM E ++G + I D +V D + G + ++ EY+ K +I+A GA
Sbjct: 62 SLIARMAEQADEFGTERIKDSIVDFD------FTG--KIKILKGTKAEYQAKAVIVATGA 113
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLV 208
P+KL PGEKE TG+GVSYCATCD F EV VVGGG++A++EA+YL KVT+V
Sbjct: 114 SPKKLDCPGEKELTGKGVSYCATCDADFFQDMEVFVVGGGDSAVEEAMYLTKFASKVTIV 173
Query: 209 HRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVD-- 265
HRRD RA K +QD+ I ++V+ EI+G VESVV +N KTGE E D
Sbjct: 174 HRRDSLRAAKSIQDKAFANPKIDFKWDSVIKEIKGDGIVESVVFENTKTGELSEHFADEE 233
Query: 266 ----GVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAV 320
G+F+F GY P+TD K ++ GY + M T +PG+FAAGD V +Q+
Sbjct: 234 FGTFGIFVFTGYIPQTDIFKDKVDMNQSGYFVTNQNMETNIPGVFAAGDCREKVLRQVVT 293
Query: 321 AVGQGAIAANSAKEFIE 337
A GAIAA A+++IE
Sbjct: 294 ATADGAIAAIMAEKYIE 310
>pir||E69194 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621795|gb|AAB85213.1| (AE000850) thioredoxin
reductase [Methanobacterium thermoautotrophicum]
Length = 303
Score = 249 bits (629), Expect = 4e-65
Identities = 140/309 (45%), Positives = 188/309 (60%), Gaps = 12/309 (3%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAI-TDLIENYPGFPEGISGSELA 91
+D+I+IGAGPAG TA IY R G +++ K G + + ++ENYPGF E I+G L
Sbjct: 5 YDMIVIGAGPAGLTAGIYGGRQGSSVLMLDKGPAGGLGLEVPMMENYPGF-EMIAGMSLV 63
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+M + +EV I+ + F VKT+ Y II A G++ R
Sbjct: 64 TKMKKQATAVAELREMEEVKEIEKGDV--------FTVKTSRDT-YTASAIIFATGSKHR 114
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
+L VPGE + GRGV YCATCDGPL+ G++V++VGGGN+A QEA++L +IG V++VHRR
Sbjct: 115 QLGVPGENDLLGRGVCYCATCDGPLYKGRKVLMVGGGNSAAQEAVFLKNIGCDVSIVHRR 174
Query: 212 DKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFI 271
D+ RADK LQD+L++ IP I N+VV EI G +VE V++ N TG KVDGVFI I
Sbjct: 175 DELRADKYLQDKLREMEIPVIWNSVVKEIGGDERVEEVIIHNRVTGRDETLKVDGVFIAI 234
Query: 272 GYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAAN 330
G EP LG+ D+ GYI D + RT VP ++AAGDIT Q A +GAIAA
Sbjct: 235 GEEPLNQLAVDLGVEVDKGGYIITDKFQRTNVPLVYAAGDITGGLNQWVTACAEGAIAAT 294
Query: 331 SAKEFIESW 339
A I+S+
Sbjct: 295 YAYREIQSY 303
>sp|O83790|TRXB_TREPA THIOREDOXIN REDUCTASE >gi|7431888|pir||C71278 probable thioredoxin
reductase (trxB) - syphilis spirochete
>gi|3323124|gb|AAC65780.1| (AE001252) thioredoxin
reductase (trxB) [Treponema pallidum]
Length = 307
Score = 248 bits (626), Expect = 8e-65
Identities = 139/309 (44%), Positives = 185/309 (58%), Gaps = 12/309 (3%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENYPGFPEGISGSELA 91
+DVII+GAG AG +AA YA R L T++I +K GG + D +ENYPG+ ISG E A
Sbjct: 5 YDVIIVGAGAAGLSAAQYACRANLRTLVIESKAHGGQALLIDSLENYPGYATPISGFEYA 64
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+ M + +G + ++EV I + F + T G Y ++I+A GAE R
Sbjct: 65 ENMKKQAVAFGAQIAYEEVTTIGKRDSV-------FHITTGTGA-YTAMSVILATGAEHR 116
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
K+ +PGE EF GRGVSYCATCDGP F K V+V+GGG+ A E+L L + +VT++HRR
Sbjct: 117 KMGIPGESEFLGRGVSYCATCDGPFFRNKHVVVIGGGDAACDESLVLSRLTDRVTMIHRR 176
Query: 212 DKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
D RA K + +R LK I NT + +RG KV SV+LK+VKTGET E D VF F
Sbjct: 177 DTLRAQKAIAERTLKNPHIAVQWNTTLEAVRGETKVSSVLLKDVKTGETRELACDAVFFF 236
Query: 271 IGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQGAIAA 329
IG P T + D GYI D MRT V GIFAAGD+ F+Q+ A GA+AA
Sbjct: 237 IGMVPITGLLPD-AEKDSTGYIVTDDEMRTSVEGIFAAGDVRAKSFRQVITATSDGALAA 295
Query: 330 NSAKEFIES 338
++A +I++
Sbjct: 296 HAAASYIDT 304
>pir||D35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Eubacterium
acidaminophilum
Length = 315
Score = 247 bits (625), Expect = 1e-64
Identities = 137/318 (43%), Positives = 193/318 (60%), Gaps = 21/318 (6%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
V+D+ IIG+GPAG AA+Y AR + TI+I + +GG + IT + NYPG +G L
Sbjct: 4 VYDLAIIGSGPAGLAAALYGARAKMKTIMIEGQKVGGQIVITHEVANYPGSVREATGPSL 63
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGK--EYKGKTIIIAVGA 148
+RM E ++G + + D++V +D ++K G+ EYK K++I+A GA
Sbjct: 64 IERMEEQANEFGAEKVMDKIVDVD----------LDGKIKVIKGEKAEYKAKSVILATGA 113
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLV 208
PR PGE+E TG+GVSYCATCD F EV VVGGG+TA++EA+YL KVT+V
Sbjct: 114 APRLAGCPGEQELTGKGVSYCATCDADFFEDMEVFVVGGGDTAVEEAMYLAKFARKVTIV 173
Query: 209 HRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVD-- 265
HRRD+ RA K +Q++ K + + N+ + EI+G VES V KN+ TGET E +
Sbjct: 174 HRRDELRAAKSIQEKAFKNPKLDFMWNSAIEEIKGDGIVESAVFKNLVTGETTEYFANEE 233
Query: 266 ----GVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAV 320
G+F+FIGY PK+D K D+ GYI D M+T V G+FAAGDI +Q+
Sbjct: 234 DGTFGIFVFIGYIPKSDVFKGKITLDDAGYIITDDNMKTNVDGVFAAGDIRVKSLRQVVT 293
Query: 321 AVGQGAIAANSAKEFIES 338
A GAIAA A++++E+
Sbjct: 294 ACADGAIAATQAEKYVEA 311
>sp|P50971|TRXB_EUBAC THIOREDOXIN REDUCTASE (TRXR) >gi|1353197|gb|AAB93303.1| (L04500)
thioredoxin reductase [Eubacterium acidaminophilum]
Length = 315
Score = 247 bits (625), Expect = 1e-64
Identities = 137/318 (43%), Positives = 193/318 (60%), Gaps = 21/318 (6%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
V+D+ IIG+GPAG AA+Y AR + TI+I + +GG + IT + NYPG +G L
Sbjct: 4 VYDLAIIGSGPAGLAAALYGARAKMKTIMIEGQKVGGQIVITHEVANYPGSVREATGPSL 63
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGK--EYKGKTIIIAVGA 148
+RM E ++G + + D++V +D ++K G+ EYK K++I+A GA
Sbjct: 64 IERMEEQANEFGAEKVMDKIVDVD----------LDGKIKVIKGEKAEYKAKSVILATGA 113
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLV 208
PR PGE+E TG+GVSYCATCD F EV VVGGG+TA++EA+YL KVT+V
Sbjct: 114 APRLAGCPGEQELTGKGVSYCATCDADFFEDMEVFVVGGGDTAVEEAMYLAKFARKVTIV 173
Query: 209 HRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVD-- 265
HRRD+ RA K +Q++ K + + N+ + EI+G VES V KN+ TGET E +
Sbjct: 174 HRRDELRAAKSIQEKAFKNPKLDFMWNSAIEEIKGDGIVESAVFKNLVTGETTEYFANEE 233
Query: 266 ----GVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAV 320
G+F+FIGY PK+D K D+ GYI D M+T V G+FAAGDI +Q+
Sbjct: 234 DGTFGIFVFIGYIPKSDVFKGKITLDDAGYIITDDNMKTNVEGVFAAGDIRVKSLRQVVT 293
Query: 321 AVGQGAIAANSAKEFIES 338
A GAIAA A++++E+
Sbjct: 294 ACADGAIAATQAEKYVEA 311
>emb|CAA11546.1| (AJ223781) thioredoxin reductase [Staphylococcus aureus]
Length = 311
Score = 246 bits (622), Expect = 2e-64
Identities = 140/315 (44%), Positives = 194/315 (61%), Gaps = 13/315 (4%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
+D+ IIGAGPAG TAA+YA+R L T++I + + GG MA T+ +EN+PGF E I+G +L+
Sbjct: 6 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGF-EMITGPDLS 64
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+M+EH KK+G + ++ + E +++V KE K +IIA GA +
Sbjct: 65 TKMFEHAKKFGAVYQYGDIKSV--------EDKGEYKVINFGNKELTAKAVIIATGAGYK 116
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
K+ VPGE+E GRGVSYCA CDG F K + V+GGG++A++E +L KVT+VHRR
Sbjct: 117 KIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 176
Query: 212 DKFRADKILQDR-LKQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKKVDGVFI 269
D+ RA +ILQDR K I I + + I + KV SV L + K G + DGVFI
Sbjct: 177 DELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFI 236
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGAIA 328
+IG +P T K LGIT++ GYI M T VPGIFAAGD+ + +QI A G G+IA
Sbjct: 237 YIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIA 296
Query: 329 ANSAKEFIESWNGKS 343
A S +IE N ++
Sbjct: 297 AQSTSGYIEHLNDQA 311
>sp|P52213|TRXB_CLOLI THIOREDOXIN REDUCTASE (TRXR) >gi|2117556|pir||S63990 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Clostridium litorale
>gi|1171125|gb|AAC43575.1| (U24268) thioredoxin
reductase [Clostridium litorale]
Length = 315
Score = 241 bits (609), Expect = 8e-63
Identities = 135/317 (42%), Positives = 189/317 (59%), Gaps = 21/317 (6%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
V+D+ IIG+GPAG AA+Y AR + T+++ +GG + IT + NYPG +G L
Sbjct: 4 VYDIAIIGSGPAGLAAALYGARAKMKTLLLEGMKVGGQIVITHEVANYPGSVPEATGPSL 63
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGK--EYKGKTIIIAVGA 148
RM E V+++G + + D +V +D + ++K G EYK K +I+A GA
Sbjct: 64 IGRMEEQVEEFGAERVMDNIVDVDFTD----------KIKVLKGAKGEYKAKAVIVATGA 113
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLV 208
P+ PGEKE TG+GVSYCATCD F EV V+GGG+TA++EA++L KVT+V
Sbjct: 114 SPKLAGCPGEKELTGKGVSYCATCDADFFEDMEVFVIGGGDTAVEEAMFLTKFARKVTIV 173
Query: 209 HRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETF------E 261
HRR + RA K +Q++ K + + NTV+ EI+G VES V KN +TGE E
Sbjct: 174 HRRAELRAAKSIQEKAFKNEKLNFMWNTVIEEIKGDGIVESAVFKNRETGEVTEFVAPEE 233
Query: 262 KKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAV 320
G+F+FIGY+PK+ V+ DE GYI D M+T V G+FAAGDI +Q+
Sbjct: 234 DGTFGIFVFIGYDPKSALVEGKLELDETGYIPTDDNMKTNVEGVFAAGDIRVKSLRQVVT 293
Query: 321 AVGQGAIAANSAKEFIE 337
A GAIAA A+++IE
Sbjct: 294 ATADGAIAAVQAEKYIE 310
>sp|P23160|R34K_CLOPA 34.2 KD PROTEIN IN RUBREDOXIN OPERON (ORF A) >gi|322212|pir||S29117
thioredoxin reductase (NADPH) (EC 1.6.4.5) - Clostridium
pasteurianum >gi|144906|gb|AAA23276.1| (M60116) product
homologous to E.coli thioredoxin reductase: J.Biol.Chem.
(1988) 263:9015-9019, and to F52a protein of alkyl
hydroperoxide reductase from S.typhimurium: J.Biol.Chem.
(1990) 265:10535-10540; open reading frame A
[Clostridium pasteurianum]
Length = 308
Score = 233 bits (589), Expect = 2e-60
Identities = 126/311 (40%), Positives = 196/311 (62%), Gaps = 11/311 (3%)
Query: 29 ESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISG 87
E K D++IIGAGPAG TAAIYA R L+T+++ +L GG + T +EN+PGF ISG
Sbjct: 3 EEKQLDLVIIGAGPAGLTAAIYAIRAKLNTLVLENELVGGQIRETYTVENFPGF-NVISG 61
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVG 147
++LA +M EH GV++ D+ I+ + + E ++ YK K +IIA G
Sbjct: 62 ADLADKMEEHAASIGVNI--DQFSNIEKIKLSDDE-----KIIETEDVIYKVKALIIATG 114
Query: 148 AEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTL 207
A+ R+L +P E++ G+ + YC CDG L+ GK+++VVGGGN+A++ A++L +T+
Sbjct: 115 AKSRRLPIPEEEKLHGKVIHYCELCDGALYQGKDLVVVGGGNSAVEAAIFLTKYARNITI 174
Query: 208 VHRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDG 266
VH+ D +A K QD L K + I ++ + I G N++E +V++NVKT + E K DG
Sbjct: 175 VHQFDYLQAQKYSQDELFKHKNVKIIWDSEIRNIVGENEIEKIVVENVKTKQKTELKADG 234
Query: 267 VFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQG 325
VF++IGYEPKT+ K +++GYI+ D M T + G+FAAGD+ + + +Q+ AV G
Sbjct: 235 VFVYIGYEPKTELFKDSININKWGYIETDENMETNIKGVFAAGDVRSKLIRQLTTAVSDG 294
Query: 326 AIAANSAKEFI 336
+AA A+++I
Sbjct: 295 TVAALMAEKYI 305
>emb|CAB82468.1| (Y14324) hypothetical protein [Staphylococcus aureus]
Length = 291
Score = 230 bits (581), Expect = 2e-59
Identities = 132/300 (44%), Positives = 184/300 (61%), Gaps = 13/300 (4%)
Query: 48 AIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVI 106
A+YA+R L T++I + + GG MA T+ +EN+PGF E I+G +L+ +M+EH KK+G
Sbjct: 1 AVYASRANLKTVMIERGIPGGQMANTEEVENFPGF-EMITGPDLSTKMFEHAKKFGAVYQ 59
Query: 107 FDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGV 166
+ ++ + E +++V KE K +IIA GAE +K+ VPGE+E GRGV
Sbjct: 60 YGDIKSV--------EDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGV 111
Query: 167 SYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDR-LK 225
SYCA CDG F K + V+GGG++A++E +L KVT+VHRRD+ RA +ILQDR K
Sbjct: 112 SYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFK 171
Query: 226 QAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLG 284
I I + + I + KV SV L + K G + DGVFI+IG +P T K LG
Sbjct: 172 NDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLG 231
Query: 285 ITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGAIAANSAKEFIESWNGKS 343
IT++ GYI M T VPGIFAAGD+ + +QI A G G+IAA SA E+IE N ++
Sbjct: 232 ITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA 291
>sp|O30973|TRXB_MYCSM THIOREDOXIN REDUCTASE (TRXR) >gi|2511764|gb|AAB80939.1| (AF023161)
thioredoxin reductase [Mycobacterium smegmatis]
Length = 311
Score = 227 bits (572), Expect = 2e-58
Identities = 127/309 (41%), Positives = 188/309 (60%), Gaps = 12/309 (3%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
V DVIIIG+GPAGYTAAIYAAR L ++ GG + T +ENYPGF EGI+G EL
Sbjct: 7 VHDVIIIGSGPAGYTAAIYAARAQLKPLVFEGTQFGGALMTTTEVENYPGFREGITGPEL 66
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
+M E ++ D+ R++ + EGP + V + ++ + +I+A+GA
Sbjct: 67 MDQMREQALRFRADL------RMEDVDAVQLEGPVKTVV--VGDETHQARAVILAMGAAA 118
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
R L VPGE+ TG GVS CATCDG F ++++VVGGG++A++EA +L VTL+HR
Sbjct: 119 RHLGVPGEEALTGMGVSTCATCDGFFFRDQDIVVVGGGDSAMEEATFLTRFARSVTLIHR 178
Query: 211 RDKFRADKILQDRLK-QAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFI 269
RD+FRA KI+ +R + I + NT +T+I G KV V L++ TGE + V GVF+
Sbjct: 179 RDEFRASKIMLERARANEKITFLTNTEITQIEGDPKVTGVRLRDTVTGEESKLDVTGVFV 238
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKVD-MYMRTKVPGIFAAGD-ITNVFKQIAVAVGQGAI 327
IG++P+++ V+ D+ GY+KV T + G+FAAGD + + ++Q A G G
Sbjct: 239 AIGHDPRSELVRGQVELDDEGYVKVQGRTTYTSLDGVFAAGDLVDHTYRQAITAAGSGCA 298
Query: 328 AANSAKEFI 336
A+ A+ ++
Sbjct: 299 ASIDAERWL 307
>pir||T36577 thioredoxin reductase (NADPH) - Streptomyces coelicolor
>gi|4808386|emb|CAB42713.1| (AL049826) thioredoxin
reductase (NADPH) [Streptomyces coelicolor A3(2)]
Length = 322
Score = 227 bits (572), Expect = 2e-58
Identities = 126/315 (40%), Positives = 188/315 (59%), Gaps = 18/315 (5%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL--GGNMAITDLIENYPGFPEGISG 87
S V +VIIIG+GPAGYTAA+Y AR L ++ + GG + T +EN+PGF +GI G
Sbjct: 2 SDVRNVIIIGSGPAGYTAALYTARASLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMG 61
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTAN---GKEYKGKTIII 144
EL M +++G ++I D+VV +D + E+KT G ++ K +I+
Sbjct: 62 PELMDNMRAQAERFGAELIPDDVVAVDLSG----------EIKTVTDTAGTVHRAKAVIV 111
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
G++ RKL +P E +GRGVS+CATCDG F +++ V+GGG+TA++EA +L
Sbjct: 112 TTGSQHRKLGLPNEDALSGRGVSWCATCDGFFFKDQDIAVIGGGDTAMEEATFLSRFAKS 171
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKK 263
VT+VHRRD RA K +Q+R I + ++ V E++G K+ + L+NVKTGE +
Sbjct: 172 VTIVHRRDTLRASKAMQERAFADPKISFVWDSEVAEVQGDQKLAGLKLRNVKTGELSDLP 231
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDIT-NVFKQIAVA 321
V G+FI IG++P+T+ K D GY+KVD RT + G+F AGD+ + ++Q A
Sbjct: 232 VTGLFIAIGHDPRTELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITA 291
Query: 322 VGQGAIAANSAKEFI 336
G G AA A+ F+
Sbjct: 292 AGTGCSAALDAERFL 306
>sp|P52215|TRXB_STRCO THIOREDOXIN REDUCTASE (TRXR) >gi|4376081|emb|CAA63076.1| (X92105)
thioredoxin reductase (NADPH) [Streptomyces coelicolor
A3(2)]
Length = 322
Score = 226 bits (571), Expect = 2e-58
Identities = 126/315 (40%), Positives = 188/315 (59%), Gaps = 18/315 (5%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL--GGNMAITDLIENYPGFPEGISG 87
S V +VIIIG+GPAGYTAA+Y AR L ++ + GG + T +EN+PGF +GI G
Sbjct: 2 SDVRNVIIIGSGPAGYTAALYTARASLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMG 61
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTAN---GKEYKGKTIII 144
EL M +++G ++I D+VV +D + E+KT G ++ K +I+
Sbjct: 62 PELMDNMRAQAERFGAELIPDDVVAVDLSG----------EIKTVTDTAGTVHRAKAVIV 111
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
G++ RKL +P E +GRGVS+CATCDG F +++ V+GGG+TA++EA +L
Sbjct: 112 TTGSQHRKLGLPNEDALSGRGVSWCATCDGFFFKDQDIAVIGGGDTAMEEATFLSRFAKS 171
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKK 263
VT+VHRRD RA K +Q+R I + ++ V E++G K+ + L+NVKTGE +
Sbjct: 172 VTIVHRRDTLRASKAMQERAFADPKISFVWDSEVAEVQGDQKLAGLKLRNVKTGELSDLP 231
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDIT-NVFKQIAVA 321
V G+FI IG++P+T+ K D GY+KVD RT + G+F AGD+ + ++Q A
Sbjct: 232 VTGLFIAIGHDPRTELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITA 291
Query: 322 VGQGAIAANSAKEFI 336
G G AA A+ F+
Sbjct: 292 AGTGCSAAVDAEPFL 306
>sp|P46843|TRXB_MYCLE BIFUNCTIONAL THIOREDOXIN REDUCTASE/THIOREDOXIN [INCLUDES:
THIOREDOXIN REDUCTASE (TRXR); THIOREDOXIN]
>gi|7427763|pir||S77662 thioredoxin reductase (NADPH)
(EC 1.6.4.5) / thioredoxin - Mycobacterium leprae
>gi|871419|emb|CAA61150.1| (X87899) thioredoxin
/thioredoxin reductase hybrid protein [Mycobacterium
leprae] >gi|886315|gb|AAB53131.1| (L39923) thioredoxin
reductase/thioredoxin [Mycobacterium leprae]
Length = 458
Score = 225 bits (568), Expect = 5e-58
Identities = 127/314 (40%), Positives = 181/314 (57%), Gaps = 11/314 (3%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
+ +VI+IG+GPAGYTAA+YAAR L ++ GG + T +ENYPGF GI+G EL
Sbjct: 11 IHEVIVIGSGPAGYTAALYAARAQLTPLVFEGTSFGGALMTTTEVENYPGFRNGITGPEL 70
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
M E ++G ++ R + E GP + V TA G+ Y+ + +I+A+G
Sbjct: 71 MDDMREQALRFGAEL------RTEDVESVSLRGPIK-SVVTAEGQTYQARAVILAMGTSV 123
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
R L +PGE+E GRGVS CATCDG F G+++ V+GGG++A++EAL+L VTLVHR
Sbjct: 124 RYLQIPGEQELLGRGVSACATCDGSFFRGQDIAVIGGGDSAMEEALFLTRFARSVTLVHR 183
Query: 211 RDKFRADKILQDRLKQAG-IPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFI 269
RD+FRA KI+ R + I I N V + G V + L+N TGE V GVF+
Sbjct: 184 RDEFRASKIMLGRARNNDKIKFITNHTVVAVNGYTTVTGLRLRNTTTGEETTLVVTGVFV 243
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKV-DMYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAI 327
IG+EP++ V + D GY+ V T + G+FAAGD+ + ++Q A G G
Sbjct: 244 AIGHEPRSSLVSDVVDIDPDGYVLVKGRTTSTSMDGVFAAGDLVDRTYRQAITAAGSGCA 303
Query: 328 AANSAKEFIESWNG 341
AA A+ ++ G
Sbjct: 304 AAIDAERWLAEHAG 317
>sp|Q9ZD97|TRXB_RICPR THIOREDOXIN REDUCTASE (TRXR) >gi|7431880|pir||D71703 thioredoxin
reductase (trxB1) RP445 - Rickettsia prowazekii
>gi|3861002|emb|CAA14902.1| (AJ235271) THIOREDOXIN
REDUCTASE (trxB1) [Rickettsia prowazekii]
Length = 310
Score = 224 bits (565), Expect = 1e-57
Identities = 134/309 (43%), Positives = 183/309 (58%), Gaps = 14/309 (4%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
V+IIG+GPAG +AAIY AR L I+I GG + +T +ENYPGF E I G L ++
Sbjct: 7 VLIIGSGPAGLSAAIYTARSALKPILINGMQPGGQLTMTTDVENYPGFAETIQGPWLMEQ 66
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M K G ++I D V R+D ++ F++ T G EY+ +III GAE + L
Sbjct: 67 MSMQAKNVGTEIISDYVERVDLSKRP-------FKIFTGTGNEYEADSIIICTGAESKWL 119
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+ E+EF G GVS CA CDG F +E++VVGGGN+AL+EALYL + KVT+VHRR+
Sbjct: 120 GIASEQEFRGFGVSSCAICDGFFFKNQEIVVVGGGNSALEEALYLTNHANKVTVVHRRNS 179
Query: 214 FRADKILQDRL-KQAGIPTILNTVVTEIRGTNK---VESVVLKNVKTGETFEKKVDGVFI 269
FRA+KILQDRL K I I + ++ EI G+NK V V ++NV T E GVFI
Sbjct: 180 FRAEKILQDRLFKNPKISVIWDHIIDEIVGSNKPKAVTGVKIQNVYTNEINLVNCSGVFI 239
Query: 270 FIGYEPKTDFVK-HLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAI 327
IG+ P T K + I D+ + RT V G+FAAGD+ + +++Q A G +
Sbjct: 240 AIGHAPNTALFKGQIAIDDDNYIVTQSGSTRTNVEGVFAAGDVQDKIYRQAVTAAASGCM 299
Query: 328 AANSAKEFI 336
AA +F+
Sbjct: 300 AALEVAKFL 308
>sp|P52214|TRXB_MYCTU THIOREDOXIN REDUCTASE (TRXR) (TR) >gi|7431882|pir||A70851 probable
trxB2 protein - Mycobacterium tuberculosis (strain
H37RV) >gi|2808698|emb|CAA16226.1| (AL021426) trxB2
[Mycobacterium tuberculosis]
Length = 335
Score = 224 bits (565), Expect = 1e-57
Identities = 126/309 (40%), Positives = 182/309 (58%), Gaps = 11/309 (3%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
V DVI+IG+GPAGYTAA+YAAR L ++ GG + T +ENYPGF GI+G EL
Sbjct: 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPEL 73
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
M E ++G D+ R++ E GP + V TA+G+ ++ + +I+A+GA
Sbjct: 74 MDEMREQALRFGADL------RMEDVESVSLHGPLK-SVVTADGQTHRARAVILAMGAAA 126
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
R L VPGE+E GRGVS CATCDG F +++ V+GGG++A++EA +L VTLVHR
Sbjct: 127 RYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHR 186
Query: 211 RDKFRADKILQDRLKQAG-IPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFI 269
RD+FRA KI+ DR + I + N V + G V + +++ TG V GVF+
Sbjct: 187 RDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFV 246
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKVD-MYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAI 327
IG+EP++ V+ D GY+ V T +PG+FAAGD+ + ++Q A G G
Sbjct: 247 AIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCA 306
Query: 328 AANSAKEFI 336
AA A+ ++
Sbjct: 307 AAIDAERWL 315
>emb|CAA07451.1| (AJ007313) thioredoxin reductase (NADPH) [Streptomyces coelicolor
A3(2)]
Length = 322
Score = 224 bits (564), Expect = 2e-57
Identities = 126/315 (40%), Positives = 186/315 (59%), Gaps = 18/315 (5%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL--GGNMAITDLIENYPGFPEGISG 87
S V +VIIIG+GPAGYTAA+Y AR L ++ + GG + T +EN+PGF +GI G
Sbjct: 2 SDVRNVIIIGSGPAGYTAALYTARRSLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMG 61
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTAN---GKEYKGKTIII 144
EL M +G ++I D+VV +D + E+KT G ++ K +I+
Sbjct: 62 PELMDNMRAQADGFGAELIPDDVVAVDLSG----------EIKTVTDTAGTVHRAKAVIV 111
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
G++ RKL +P E +GRGVS+CATCDG F +++ V+GGG+TA++EA +L
Sbjct: 112 TTGSQHRKLGLPNEDALSGRGVSWCATCDGFFFKDQDIAVIGGGDTAMEEATFLSRFAKS 171
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKK 263
VT+VHRRD RA K +Q+R I + ++ V E++G K+ + L+NVKTGE +
Sbjct: 172 VTIVHRRDTLRASKAMQERAFADPKISFVWDSEVAEVQGDQKLAGLKLRNVKTGELSDLP 231
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDIT-NVFKQIAVA 321
V G+FI IG++P+T+ K D GY+KVD RT + G+F AGD+ + ++Q A
Sbjct: 232 VTGLFIAIGHDPRTELFKGQLDLDPEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITA 291
Query: 322 VGQGAIAANSAKEFI 336
G G AA A+ F+
Sbjct: 292 AGTGCSAAVDAEPFL 306
>emb|CAA65070.1| (X95798) thioredoxin [Mycobacterium tuberculosis]
Length = 335
Score = 223 bits (563), Expect = 2e-57
Identities = 126/309 (40%), Positives = 181/309 (57%), Gaps = 11/309 (3%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSEL 90
V DVI+IG+GPAGYTAA+YAAR L ++ GG + T +ENYPGF GI+G EL
Sbjct: 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPEL 73
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
M E ++G D+ R++ E GP + V TA+G+ ++ + +I+A+GA
Sbjct: 74 MDEMREQALRFGADL------RMEDVESVSLHGPLK-SVVTADGQTHRARAVILAMGARA 126
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
R L VPGE+E GRGVS CATCDG F +++ V+GGG++A++EA +L VTLVHR
Sbjct: 127 RYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHR 186
Query: 211 RDKFRADKILQDRLKQAG-IPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFI 269
RD+FRA KI+ DR + I + N V + G V + ++ TG V GVF+
Sbjct: 187 RDEFRASKIMLDRARNNDKIRFLTNHTVCAVDGDTTVTGLRYRDTNTGAETTLPVTGVFV 246
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKVD-MYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAI 327
IG+EP++ V+ D GY+ V T +PG+FAAGD+ + ++Q A G G
Sbjct: 247 AIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCA 306
Query: 328 AANSAKEFI 336
AA A+ ++
Sbjct: 307 AAIDAERWL 315
>sp|Q05741|TRXB_STRCL THIOREDOXIN REDUCTASE >gi|1076065|pir||A53307 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Streptomyces clavuligerus
>gi|581639|emb|CAA79940.1| (Z21946) thioredoxin
reductase [Streptomyces clavuligerus]
Length = 322
Score = 222 bits (560), Expect = 5e-57
Identities = 124/315 (39%), Positives = 185/315 (58%), Gaps = 18/315 (5%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL--GGNMAITDLIENYPGFPEGISG 87
S V +VIIIG+GPAGYTAA+Y AR L ++ + GG + T +EN+PGF +GI G
Sbjct: 2 SDVRNVIIIGSGPAGYTAALYTARASLQPLVFEGAVTAGGALMNTTDVENFPGFRDGIMG 61
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTAN---GKEYKGKTIII 144
+L M +++G ++I D+VV +D ++KT G ++ K +I+
Sbjct: 62 PDLMDNMRAQAERFGAELIPDDVVSVDLTG----------DIKTVTDSAGTVHRAKAVIV 111
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
G++ RKL +P E +GRGVS+CATCDG F ++++VVGGG+TA++EA +L
Sbjct: 112 TTGSQHRKLGLPREDALSGRGVSWCATCDGFFFKDQDIVVVGGGDTAMEEATFLSRFAKS 171
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKK 263
VT+VHRRD RA K +QDR I N+ V I G K+ + L++ KTGET E
Sbjct: 172 VTIVHRRDSLRASKAMQDRAFADPKISFAWNSEVATIHGEQKLTGLTLRDTKTGETRELA 231
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKV-DMYMRTKVPGIFAAGDIT-NVFKQIAVA 321
G+FI +G++P+T+ K D+ GY+KV RT + G+FAAGD+ + ++Q A
Sbjct: 232 ATGLFIAVGHDPRTELFKGQLDLDDEGYLKVASPSTRTNLTGVFAAGDVVDHTYRQAITA 291
Query: 322 VGQGAIAANSAKEFI 336
G G AA A+ ++
Sbjct: 292 AGTGCSAALDAERYL 306
>pir||C83538 thioredoxin reductase 2 PA0849 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9946746|gb|AAG04238.1|AE004520_1
(AE004520) thioredoxin reductase 2 [Pseudomonas
aeruginosa]
Length = 316
Score = 222 bits (560), Expect = 5e-57
Identities = 129/316 (40%), Positives = 190/316 (59%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
VII+G+GPAGY+AA+YAAR L ++IT GG + T ++N+PG P G++G L +R
Sbjct: 10 VIILGSGPAGYSAAVYAARANLKPLLITGMQAGGQLTTTTEVDNWPGDPHGLTGPALMQR 69
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M EH +++ +++FD + +D A F ++ NG Y +I+A GA R L
Sbjct: 70 MQEHAERFETEIVFDHIHAVDLAGKP-------FTLRGDNGT-YTCDALIVATGASARYL 121
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F G+GVS CATCDG + +EV V+GGGNTA++EALYL +I +VTLVHRR+
Sbjct: 122 GLPSEQAFMGKGVSACATCDGFFYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRET 181
Query: 214 FRADKILQDRLK----QAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFI 269
FRA+KILQD+L+ + I LN V E+ G + V + G + E VDG+F+
Sbjct: 182 FRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLKTRDGGSEEIAVDGMFV 241
Query: 270 FIGYEPKTD-FVKHLGITDEYGYIKVD-----MYMRTKVPGIFAAGDIT-NVFKQIAVAV 322
IG+ P T F L + D GY+ V+ T VPG+FAAGD+ +V++Q +
Sbjct: 242 AIGHTPNTSLFEGQLALKD--GYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSA 299
Query: 323 GQGAIAANSAKEFIES 338
G G +AA + +++S
Sbjct: 300 GAGCMAALDVERYLDS 315
>emb|CAB61258.1| (AJ251005) putative thioredoxin reductase [Streptomyces coelicolor
A3(2)] >gi|6900903|emb|CAB71847.1| (AL138667) putative
thioredoxin reductase. [Streptomyces coelicolor A3(2)]
Length = 326
Score = 220 bits (554), Expect = 2e-56
Identities = 120/319 (37%), Positives = 191/319 (59%), Gaps = 13/319 (4%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL--GGNMAITDLIENYPGFPEGISGSE 89
V DVI+IG+GPAGYTAA+Y AR L+ ++ + GG++ T +EN+PGFP+G+ G E
Sbjct: 7 VRDVIVIGSGPAGYTAALYTARASLNPLVFGGAIFVGGSLTTTTEVENFPGFPDGVQGPE 66
Query: 90 LAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAE 149
L + M +++G +++ D++V +D G + TA G ++ +T+I+A G+
Sbjct: 67 LMENMRAQAERFGAEMVDDDIVAVD------LTGDVKTVTDTA-GTVHRARTVIVATGSG 119
Query: 150 PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVH 209
RKL VP E E +GRGVS+CATCDG F ++++VVGGG+TA++EA +L VT+VH
Sbjct: 120 YRKLGVPKEDELSGRGVSWCATCDGFFFRDRDIVVVGGGDTAMEEATFLTRFARSVTVVH 179
Query: 210 RRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKKVDGV 267
RR RA +++Q+R + I ++ V + N + + L++ TGET E G+
Sbjct: 180 RRSALRASQVMQNRAFSEDKISLAFDSEVATLHEENGMLSGMTLRDTLTGETRELATTGL 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDIT-NVFKQIAVAVGQG 325
FI IG++P+T+ K D GY+ V+ RT VPG+F AGD+ + ++Q A G
Sbjct: 240 FIAIGHDPRTELFKGQLHLDSEGYLMVESPSTRTNVPGVFGAGDVVDHTYRQAITAASSG 299
Query: 326 AIAANSAKEFIESWNGKSI 344
AA A+ ++ + + S+
Sbjct: 300 CAAALDAERYLAARSDTSV 318
>sp|O82864|AHPF_PSEPU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|3298356|dbj|BAA31469.1|
(AB010689) AhpF [Pseudomonas putida]
Length = 520
Score = 219 bits (553), Expect = 3e-56
Identities = 129/317 (40%), Positives = 189/317 (58%), Gaps = 10/317 (3%)
Query: 20 GGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYP 79
G +++ + +DV+++G GPAG AAIYAAR G+ T + + GG + T IEN+
Sbjct: 199 GARQAEKINAKEAFDVLVVGGGPAGAAAAIYAARKGIRTGVAAERFGGQVLDTLAIENFI 258
Query: 80 GFPEGISGSELAKRMYEHVKKYGVDVI-FDEVVRIDPAECAYYEGPCQFEVKTANGKEYK 138
E G +LA + EHVK+Y VD++ + PA EG EV+ A G K
Sbjct: 259 SVQE-TEGPKLATALEEHVKQYDVDIMNLQRGEALIPAA----EGGLH-EVRLAGGASLK 312
Query: 139 GKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYL 198
KT+I+A GA R+++VPGE+E+ GRGV+YC CDGPLF GK V V+GGGN+ ++ A+ L
Sbjct: 313 AKTVILATGARWREMNVPGEQEYRGRGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDL 372
Query: 199 HSIGVKVTLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGT-NKVESVVLKNVKT 256
I +VTL+ + RAD +LQ +L+ + I + + TE+ G KV + K+ T
Sbjct: 373 AGIVAQVTLIEFDSQLRADAVLQRKLRSLPNVNVITSALTTEVLGNGEKVTGLRYKDRST 432
Query: 257 GETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-F 315
E E ++G+F+ IG P TD++K G I VD +T +PG+FAAGD+T V +
Sbjct: 433 DEQHEVALEGIFVQIGLLPNTDWLKGTVELSPRGEIIVDAKGQTSIPGVFAAGDVTTVPY 492
Query: 316 KQIAVAVGQGAIAANSA 332
KQI +AVG+GA A+ +A
Sbjct: 493 KQIVIAVGEGAKASLAA 509
>gb|AAF82119.1|AF276071_3 (AF276071) NADH-peroxiredoxin reductase [Thermus aquaticus]
Length = 509
Score = 218 bits (550), Expect = 7e-56
Identities = 127/310 (40%), Positives = 184/310 (58%), Gaps = 10/310 (3%)
Query: 29 ESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGS 88
+ + +DV++IG GPAG TAAIYAAR G+ T I+ + GG + T IEN+ + G
Sbjct: 205 DKEPFDVLVIGGGPAGATAAIYAARKGIRTGIVAERFGGQILDTLGIENFISV-KYTEGP 263
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
+LA + EHVK+Y VD++ + + E EV+ NG K KT++IA GA
Sbjct: 264 KLAASIEEHVKQYNVDIMNSQRAK-------RLEKKDLIEVELENGAVLKSKTVVIATGA 316
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLV 208
R L VPGE+EF +GV+YC CDGPLF GK V V+GGGN+ ++ A+ L I VTL+
Sbjct: 317 RWRNLGVPGEEEFKNKGVAYCPHCDGPLFEGKHVAVIGGGNSGVEAAIDLAGIASHVTLL 376
Query: 209 HRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGV 267
+ +AD +LQDRL + I N TEI GT+KV + + +TGE ++ GV
Sbjct: 377 EFAPELKADAVLQDRLYSLPNVTVIKNAQTTEITGTDKVNGLTYIDRETGEEHHIELQGV 436
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDIT-NVFKQIAVAVGQGA 326
F+ IG P T++++ + +G I VD T + G+FAAGD T + +KQI +++G GA
Sbjct: 437 FVQIGLVPNTEWLEGTVERNRFGEIIVDKRGATNIEGVFAAGDCTDSAYKQIIISMGSGA 496
Query: 327 IAANSAKEFI 336
AA SA +++
Sbjct: 497 TAALSAFDYL 506
>sp|P57399|TRXB_BUCAI THIOREDOXIN REDUCTASE (TRXR) >gi|10038988|dbj|BAB13022.1|
(AP001119) thioredoxin reductase [Buchnera sp. APS]
Length = 319
Score = 217 bits (547), Expect = 2e-55
Identities = 138/327 (42%), Positives = 189/327 (57%), Gaps = 25/327 (7%)
Query: 27 VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGI 85
+D+ K +II+G+GPAGYTAAIYAAR LD +IT + GG + T+ IEN+PG I
Sbjct: 1 MDKVKHSKIIILGSGPAGYTAAIYAARANLDPFLITGTNKGGQLMNTNEIENWPGDYNKI 60
Query: 86 SGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
SGSEL RMY+H + VI D V+ ++ + ++ +Y ++IIA
Sbjct: 61 SGSELMNRMYKHAIELKTKVICDTVISVNFKKNPFF--------LIGENNKYTADSVIIA 112
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
GA PR L + E F G+GVS CA CDG + KEV VVGGGNTA++E LYL + KV
Sbjct: 113 TGANPRYLGLQSESLFKGKGVSTCAVCDGFFYKNKEVAVVGGGNTAIEETLYLSNFVKKV 172
Query: 206 TLVHRRDKFRADKILQDRL----KQAGIPTILNTVVTEIRGTNKVESVVL---KNVKTGE 258
L+HR FRA+KIL DRL K I LN++V I G + + +L KN K
Sbjct: 173 HLIHRGINFRAEKILLDRLEKKIKSQKIIIYLNSIVKNILGNSSGVTALLIEQKNSKEKT 232
Query: 259 TFEKKVDGVFIFIGYEPKTD-FVKHLGITDEYGYIKVDM-----YMRTKVPGIFAAGD-I 311
+ +V G+F+ IGY P T+ FV L + D GYI+V Y +T +PGIFAAGD I
Sbjct: 233 ESKIQVSGLFVAIGYTPNTNIFVNKLKMKD--GYIQVTRQEHGNYTQTSIPGIFAAGDVI 290
Query: 312 TNVFKQIAVAVGQGAIAANSAKEFIES 338
+V++Q + G +AA ++ +I S
Sbjct: 291 DHVYRQAITSSASGCMAALDSERYINS 317
>dbj|BAA25696.1| (AB010712) NADH oxidase/alkyl hydroperoxidase reductase
[Streptococcus mutans]
Length = 510
Score = 217 bits (546), Expect = 2e-55
Identities = 129/320 (40%), Positives = 188/320 (58%), Gaps = 11/320 (3%)
Query: 20 GGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYP 79
G L + D+ V+DV++IG GPAG +AAIYAAR G+ T ++ + +GG + T IEN
Sbjct: 196 GPLKEDAFDDKGVFDVLVIGGGPAGNSAAIYAARKGVKTGLLAETMGGQVMETVGIENMI 255
Query: 80 GFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKG 139
G P + G +L ++ EH K Y VD++ + EV+ NG K
Sbjct: 256 GTPY-VEGPQLMAQVEEHTKSYSVDIM-------KAPRAKSIQKTDLVEVELDNGAHLKA 307
Query: 140 KTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLH 199
KT ++A+GA+ RK++VPGEKEF +GV+YC CDGPLF K+V V+GGGN+ L+ A+ L
Sbjct: 308 KTAVLALGAKWRKINVPGEKEFFNKGVTYCPHCDGPLFTDKKVAVIGGGNSGLEAAIDLA 367
Query: 200 SIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVT-EIRGTNKVESVVLKNVKTGE 258
+ V ++ + +ADKILQDR + TIL V T EI G + VE + + T E
Sbjct: 368 GLASHVYILEFLPELKADKILQDRAEALDNITILTNVATKEIIGNDHVEGLRYSDRTTNE 427
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGIT-DEYGYIKVDMYMRTKVPGIFAAGDIT-NVFK 316
+ ++GVF+ IG P TD++K G+ +E G I V T +P IFAAGD T + +K
Sbjct: 428 EYLLDLEGVFVQIGLVPSTDWLKDSGLALNEKGEIIVAKDGATNIPAIFAAGDCTDSAYK 487
Query: 317 QIAVAVGQGAIAANSAKEFI 336
QI +++G GA AA A +++
Sbjct: 488 QIIISMGSGATAALGAFDYL 507
>pir||JC2311 NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) precursor -
Streptococcus mutans >gi|464216|dbj|BAA04825.1| (D21803)
NADH oxidase [Streptococcus mutans]
Length = 510
Score = 217 bits (546), Expect = 2e-55
Identities = 129/320 (40%), Positives = 188/320 (58%), Gaps = 11/320 (3%)
Query: 20 GGLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYP 79
G L + D+ V+DV++IG GPAG +AAIYAAR G+ T ++ + +GG + T IEN
Sbjct: 196 GPLKEDAFDDKGVFDVLVIGGGPAGNSAAIYAARKGVKTGLLAETMGGQVMETVGIENMI 255
Query: 80 GFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKG 139
G P + G +L ++ EH K Y VD++ + EV+ NG K
Sbjct: 256 GTPY-VEGPQLMAQVEEHTKSYSVDIM-------KAPRAKSIQKTDLVEVELDNGAHLKA 307
Query: 140 KTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLH 199
KT ++A+GA+ RK++VPGEKEF +GV+YC CDGPLF K+V V+GGGN+ L+ A+ L
Sbjct: 308 KTAVLALGAKWRKINVPGEKEFFNKGVTYCPHCDGPLFTDKKVAVIGGGNSGLEAAIDLA 367
Query: 200 SIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVT-EIRGTNKVESVVLKNVKTGE 258
+ V ++ + +ADKILQDR + TIL V T EI G + VE + + T E
Sbjct: 368 GLASHVYILEFLPELKADKILQDRAEALDNITILTNVATKEIIGNDHVEGLRYSDRTTNE 427
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGIT-DEYGYIKVDMYMRTKVPGIFAAGDIT-NVFK 316
+ ++GVF+ IG P TD++K G+ +E G I V T +P IFAAGD T + +K
Sbjct: 428 EYLLDLEGVFVQIGLVPSTDWLKDSGLALNEKGEIIVAKDGATNIPAIFAAGDCTDSAYK 487
Query: 317 QIAVAVGQGAIAANSAKEFI 336
QI +++G GA AA A +++
Sbjct: 488 QIIISMGSGATAALGAFDYL 507
>sp|P81433|TRXB_BUCAP THIOREDOXIN REDUCTASE (TRXR) >gi|2947035|gb|AAC05433.1| (L43549)
thioredoxin reductase [Buchnera aphidicola]
Length = 319
Score = 216 bits (544), Expect = 3e-55
Identities = 124/319 (38%), Positives = 192/319 (59%), Gaps = 25/319 (7%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGISGSELAKR 93
+II+G+GPAGYTAAIY++R L+ ++IT + GG + T+ IEN+PG + I+G EL R
Sbjct: 9 IIILGSGPAGYTAAIYSSRANLNPLLITGINKGGQLMNTNEIENWPGDFKKITGPELMNR 68
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++++D ++ ++ + ++ +Y +IIA GA PR L
Sbjct: 69 MHEHSLKFKTEIVYDNIISVEFKKKPFF--------LLGEYNKYTCDAVIIATGANPRYL 120
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+ E +F G+G+S CA CDG + KE+ VVGGGNTA++E LYL + K+ L+HRR+
Sbjct: 121 GLSSENKFKGKGISTCAVCDGFFYKNKEIAVVGGGNTAIEETLYLSNFVKKIYLIHRRNN 180
Query: 214 FRADKILQDRL----KQAGIPTILNTVVTEIRGTNKVESVVL---KNVKTGETFEKKVDG 266
F+A+KIL DRL K + LN+ + +I G NK + +L KN+K + + V G
Sbjct: 181 FKAEKILIDRLLKIVKTKKVILHLNSTIEDILGNNKGVTHLLIKNKNLKEKKKLKIAVSG 240
Query: 267 VFIFIGYEPKTD-FVKHLGITDEYGYIKVDM-----YMRTKVPGIFAAGD-ITNVFKQIA 319
+F+ IGY P TD F L + D GYIK+ Y +T +PG+FAAGD I +V++Q
Sbjct: 241 LFVAIGYIPNTDIFTDQLKMKD--GYIKIKKGTHGNYTQTNIPGVFAAGDVIDHVYRQAI 298
Query: 320 VAVGQGAIAANSAKEFIES 338
+ G +AA ++ ++ S
Sbjct: 299 TSSASGCMAALDSERYLNS 317
>sp|O06465|AHPF_XANCH ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|2098747|gb|AAC45426.1|
(U94336) alkyl hydroperoxide reductase subunit F
[Xanthomonas campestris]
Length = 530
Score = 215 bits (542), Expect = 6e-55
Identities = 124/311 (39%), Positives = 189/311 (59%), Gaps = 8/311 (2%)
Query: 25 SRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEG 84
+++ + +DV+++G GPAG AA+YAAR G+ T + + GG + T IEN+ PE
Sbjct: 205 AKIAAKEAFDVLVVGGGPAGSAAAVYAARKGIRTGVAAERFGGQVLDTMSIENFISVPE- 263
Query: 85 ISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIII 144
G ++A + +HV++Y VD++ + R + A +G E+K ANG K KT+I+
Sbjct: 264 TEGPKMAAALEQHVRQYDVDIM--NLQRAEQLIPAGADG--LIEIKLANGASLKSKTVIL 319
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
+ GA R+++VPGE ++ +GV+YC CDGPLF GK V V+GGGN+ ++ A+ L I
Sbjct: 320 STGARWRQMNVPGEDQYKNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAH 379
Query: 205 VTLVHRRDKFRADKILQDRLKQA-GIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEK 262
VTLV DK RAD++LQ +L+ + I + TE+ G KV +V K+ G+
Sbjct: 380 VTLVEFDDKLRADEVLQRKLRSLHNVRIITSAQTTEVLGDGQKVTGLVYKDRTGGDIQHI 439
Query: 263 KVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVA 321
+++GVF+ IG P T+F++ G I VD +T VPG+FAAGD T V +KQI +A
Sbjct: 440 ELEGVFVQIGLLPNTEFLRGTVALSPRGEIIVDDRGQTDVPGVFAAGDATTVPYKQIVIA 499
Query: 322 VGQGAIAANSA 332
+G+G+ AA SA
Sbjct: 500 MGEGSKAALSA 510
>sp|P09625|TRXB_ECOLI THIOREDOXIN REDUCTASE (TRXR) >gi|66129|pir||RDECT thioredoxin
reductase (NADPH) (EC 1.6.4.5) [validated] - Escherichia
coli >gi|148073|gb|AAA24697.1| (J03762) thioredoxin
reductase [Escherichia coli] >gi|1651410|dbj|BAA35613.1|
(D90726) Thioredoxin reductase (NADPH) (EC 1.6.4.5)
[Escherichia coli] >gi|1651416|dbj|BAA35620.1| (D90727)
Thioredoxin reductase (NADPH) (EC 1.6.4.5) [Escherichia
coli] >gi|1787114|gb|AAC73974.1| (AE000190) thioredoxin
reductase [Escherichia coli K12]
Length = 321
Score = 213 bits (538), Expect = 2e-54
Identities = 124/316 (39%), Positives = 188/316 (59%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAA+YAAR L ++IT + GG + T +EN+PG P ++G L +R
Sbjct: 9 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMER 68
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++IFD + ++D F + NG EY +IIA GA R L
Sbjct: 69 MHEHATKFETEIIFDHINKVDLQNRP-------FRLNGDNG-EYTCDALIIATGASARYL 120
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS CATCDG + ++V V+GGGNTA++EALYL +I +V L+HRRD
Sbjct: 121 GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 180
Query: 214 FRADKI----LQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEK-KVDGV 267
FRA+KI L D+++ I N + E+ G V V L++ + + E V G+
Sbjct: 181 FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 240
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYM-----RTKVPGIFAAGDI-TNVFKQIAVA 321
F+ IG+ P T + + E GYIKV + +T +PG+FAAGD+ ++++Q +
Sbjct: 241 FVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITS 299
Query: 322 VGQGAIAANSAKEFIE 337
G G +AA A+ +++
Sbjct: 300 AGTGCMAALDAERYLD 315
>pdb|1TDE| Thioredoxin Reductase (E.C.1.6.4.5) (Wild Type)
Length = 316
Score = 213 bits (538), Expect = 2e-54
Identities = 124/316 (39%), Positives = 188/316 (59%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAA+YAAR L ++IT + GG + T +EN+PG P ++G L +R
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMER 67
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++IFD + ++D F + NG EY +IIA GA R L
Sbjct: 68 MHEHATKFETEIIFDHINKVDLQNRP-------FRLNGDNG-EYTCDALIIATGASARYL 119
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS CATCDG + ++V V+GGGNTA++EALYL +I +V L+HRRD
Sbjct: 120 GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179
Query: 214 FRADKI----LQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEK-KVDGV 267
FRA+KI L D+++ I N + E+ G V V L++ + + E V G+
Sbjct: 180 FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYM-----RTKVPGIFAAGDI-TNVFKQIAVA 321
F+ IG+ P T + + E GYIKV + +T +PG+FAAGD+ ++++Q +
Sbjct: 240 FVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITS 298
Query: 322 VGQGAIAANSAKEFIE 337
G G +AA A+ +++
Sbjct: 299 AGTGCMAALDAERYLD 314
>pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli
Length = 320
Score = 213 bits (538), Expect = 2e-54
Identities = 124/316 (39%), Positives = 188/316 (59%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAA+YAAR L ++IT + GG + T +EN+PG P ++G L +R
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMER 67
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++IFD + ++D F + NG EY +IIA GA R L
Sbjct: 68 MHEHATKFETEIIFDHINKVDLQNRP-------FRLNGDNG-EYTCDALIIATGASARYL 119
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS CATCDG + ++V V+GGGNTA++EALYL +I +V L+HRRD
Sbjct: 120 GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179
Query: 214 FRADKI----LQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEK-KVDGV 267
FRA+KI L D+++ I N + E+ G V V L++ + + E V G+
Sbjct: 180 FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYM-----RTKVPGIFAAGDI-TNVFKQIAVA 321
F+ IG+ P T + + E GYIKV + +T +PG+FAAGD+ ++++Q +
Sbjct: 240 FVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITS 298
Query: 322 VGQGAIAANSAKEFIE 337
G G +AA A+ +++
Sbjct: 299 AGTGCMAALDAERYLD 314
>sp|P43788|TRXB_HAEIN THIOREDOXIN REDUCTASE (TRXR) >gi|1075348|pir||G64186 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Haemophilus influenzae
(strain Rd KW20) >gi|1574715|gb|AAC22813.1| (U32795)
thioredoxin reductase (trxB) [Haemophilus influenzae Rd]
Length = 318
Score = 213 bits (536), Expect = 3e-54
Identities = 125/315 (39%), Positives = 188/315 (59%), Gaps = 19/315 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAAIYAAR L +++T GG + TD IEN+PG E +GS L +R
Sbjct: 9 LLILGSGPAGYTAAIYAARANLKPVLVTGLQQGGQLTTTDEIENWPGDFEMTTGSGLMQR 68
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M +H +K+ +++FD + R+D + + + + + +IIA GA R +
Sbjct: 69 MLQHAEKFETEIVFDHINRVDLSSRPFK--------LFGDVQNFTCDALIIATGASARYI 120
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ + GRGVS CATCDG + K V V+GGGNTA++EALYL +I V L+HRRD
Sbjct: 121 GLPSEENYKGRGVSACATCDGFFYRNKPVGVIGGGNTAVEEALYLANIASTVHLIHRRDS 180
Query: 214 FRADKILQDRL----KQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEKKVDGVF 268
FRA+KIL DRL ++ I + + E+ G N V + L N KTGE E K+DG+F
Sbjct: 181 FRAEKILIDRLYKKVEEGKIVLHTDRTLDEVLGDNMGVTGLRLANTKTGEKEELKLDGLF 240
Query: 269 IFIGYEPKTD-FVKHLGITDEYGYIKVDM---YMRTKVPGIFAAGDI-TNVFKQIAVAVG 323
+ IG+ P T+ F L + + Y +K + T V G+FAAGD+ + ++Q + G
Sbjct: 241 VAIGHSPNTEIFQGQLELNNGYIVVKSGLDGNATATSVEGVFAAGDVMDHNYRQAITSAG 300
Query: 324 QGAIAANSAKEFIES 338
G +AA A+ ++++
Sbjct: 301 TGCMAALDAERYLDA 315
>pir||H82668 subunit F of alkyl hydroperoxide reductase XF1531 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106569|gb|AAF84340.1|AE003983_2 (AE003983) subunit
F of alkyl hydroperoxide reductase [Xylella fastidiosa]
Length = 571
Score = 212 bits (534), Expect = 5e-54
Identities = 120/313 (38%), Positives = 188/313 (59%), Gaps = 8/313 (2%)
Query: 27 VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGIS 86
+ +DV+++GAGPAG AA+YAAR G+ T ++ + GG + T IEN+ PE
Sbjct: 248 IQAKAAFDVLVVGAGPAGTAAAVYAARKGVRTGLVAERFGGQVLDTMTIENFISVPE-TD 306
Query: 87 GSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAV 146
G + + +H+++Y VD++ + R++ A G EV+ A+G +T+I++
Sbjct: 307 GPRMVAALEQHLRQYEVDIM--NLQRVETLVPAGENG--FIEVRLASGASLSSRTVILST 362
Query: 147 GAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
GA R+++VPGE E+ +GV+YC CDGPLF GK V V+GGGN+ ++ A+ L I VT
Sbjct: 363 GARWRQMNVPGEDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIASYVT 422
Query: 207 LVHRRDKFRADKILQDRLK-QAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEKKV 264
L+ K RAD++LQ +L+ + + I+ TE+RG KV +V + TG +F +
Sbjct: 423 LLEFDTKLRADEVLQRKLRSMSNVEVIMGAQTTEVRGDGKKVTGLVYVDRSTGGSFTLAL 482
Query: 265 DGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVG 323
+GVF+ IG P T+++K G I VD T +PG+FAAGD T V +KQI +A+G
Sbjct: 483 EGVFVQIGLLPNTEWLKGRVELSPRGEIVVDECGHTSLPGVFAAGDATTVPYKQIVIAMG 542
Query: 324 QGAIAANSAKEFI 336
+G+ AA SA +++
Sbjct: 543 EGSKAALSAFDYL 555
>gb|AAK42876.1| Thioredoxin reductase (trxB-2) [Sulfolobus solfataricus]
Length = 325
Score = 210 bits (529), Expect = 2e-53
Identities = 127/314 (40%), Positives = 185/314 (58%), Gaps = 14/314 (4%)
Query: 31 KVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSEL 90
K +D II+GAG AG +AA+Y++R L T++++KDLGG + +TDLIENYPG E G L
Sbjct: 4 KTYDTIIVGAGIAGLSAALYSSRQKLSTLVLSKDLGGQLTLTDLIENYPGI-ESTGGLTL 62
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
A+++ + KK+G + I+ E V+ E F +K G EY G+ +I+A G P
Sbjct: 63 AQKIEKQAKKFGAEFIYGEEVKEIAQESDL------FIIKGIKG-EYAGRALILAFGKTP 115
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
R+++VPGE+EF G+GVSYCA CD F GK V+G G + EA+ L S
Sbjct: 116 REINVPGEQEFKGKGVSYCAICDAAFFKGKPAAVIGEGEPGI-EAIELLSNYANPAYYIT 174
Query: 211 RDKFRA--DKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVF 268
+ A ++I+++ + + + + ++ V EIRG +KVE +V+K + E + KVDGV
Sbjct: 175 SSSYLAGEEEIVKNVVNKPTVKILTSSRVLEIRGNSKVEELVIK--RGDEILQLKVDGVI 232
Query: 269 IFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGAI 327
I +GY KT+F+K +E G I VD RT G+FAAGD+T +KQ VA +G
Sbjct: 233 IEMGYTLKTEFLKGFVELNEKGEIIVDELGRTSREGVFAAGDVTQTPYKQAVVAAAEGVK 292
Query: 328 AANSAKEFIESWNG 341
AA SA +I S G
Sbjct: 293 AALSAYNYIRSKRG 306
>pdb|1TRB| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With Cys 138 Replaced
By Ser (C138s)
Length = 320
Score = 210 bits (528), Expect = 3e-53
Identities = 123/316 (38%), Positives = 187/316 (58%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAA+YAAR L ++IT + GG + T +EN+PG P ++G L +R
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMER 67
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++IFD + ++D F + NG EY +IIA GA R L
Sbjct: 68 MHEHATKFETEIIFDHINKVDLQNRP-------FRLNGDNG-EYTCDALIIATGASARYL 119
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS CAT DG + ++V V+GGGNTA++EALYL +I +V L+HRRD
Sbjct: 120 GLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179
Query: 214 FRADKI----LQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEK-KVDGV 267
FRA+KI L D+++ I N + E+ G V V L++ + + E V G+
Sbjct: 180 FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYM-----RTKVPGIFAAGDI-TNVFKQIAVA 321
F+ IG+ P T + + E GYIKV + +T +PG+FAAGD+ ++++Q +
Sbjct: 240 FVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITS 298
Query: 322 VGQGAIAANSAKEFIE 337
G G +AA A+ +++
Sbjct: 299 AGTGCMAALDAERYLD 314
>pdb|1TDF| Thioredoxin Reductase (E.C.1.6.4.5) Mutant With Cys 138 Replaced
By Ser (C138s)
Length = 316
Score = 210 bits (528), Expect = 3e-53
Identities = 123/316 (38%), Positives = 187/316 (58%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAA+YAAR L ++IT + GG + T +EN+PG P ++G L +R
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMER 67
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++IFD + ++D F + NG EY +IIA GA R L
Sbjct: 68 MHEHATKFETEIIFDHINKVDLQNRP-------FRLNGDNG-EYTCDALIIATGASARYL 119
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS CAT DG + ++V V+GGGNTA++EALYL +I +V L+HRRD
Sbjct: 120 GLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179
Query: 214 FRADKI----LQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEK-KVDGV 267
FRA+KI L D+++ I N + E+ G V V L++ + + E V G+
Sbjct: 180 FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYM-----RTKVPGIFAAGDI-TNVFKQIAVA 321
F+ IG+ P T + + E GYIKV + +T +PG+FAAGD+ ++++Q +
Sbjct: 240 FVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITS 298
Query: 322 VGQGAIAANSAKEFIE 337
G G +AA A+ +++
Sbjct: 299 AGTGCMAALDAERYLD 314
>pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
>gi|10120657|pdb|1F6M|B Chain B, Crystal Structure Of A
Complex Between Thioredoxin Reductase, Thioredoxin, And
The Nadp+ Analog, Aadp+ >gi|10120658|pdb|1F6M|E Chain E,
Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
>gi|10120660|pdb|1F6M|F Chain F, Crystal Structure Of A
Complex Between Thioredoxin Reductase, Thioredoxin, And
The Nadp+ Analog, Aadp+
Length = 320
Score = 210 bits (528), Expect = 3e-53
Identities = 123/316 (38%), Positives = 187/316 (58%), Gaps = 22/316 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAGYTAA+YAAR L ++IT + GG + T +EN+PG P ++G L +R
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMER 67
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M+EH K+ ++IFD + ++D F + NG EY +IIA GA R L
Sbjct: 68 MHEHATKFETEIIFDHINKVDLQNRP-------FRLNGDNG-EYTCDALIIATGASARYL 119
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS ATCDG + ++V V+GGGNTA++EALYL +I +V L+HRRD
Sbjct: 120 GLPSEEAFKGRGVSASATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179
Query: 214 FRADKI----LQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEK-KVDGV 267
FRA+KI L D+++ I N + E+ G V V L++ + + E V G+
Sbjct: 180 FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYM-----RTKVPGIFAAGDI-TNVFKQIAVA 321
F+ IG+ P T + + E GYIKV + +T +PG+FAAGD+ ++++Q +
Sbjct: 240 FVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITS 298
Query: 322 VGQGAIAANSAKEFIE 337
G G +AA A+ +++
Sbjct: 299 AGTGCMAALDAERYLD 314
>pir||E81845 thioredoxin reductase (NADPH) (EC 1.6.4.5) NMA1538 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380179|emb|CAB84765.1| (AL162756) thioredoxin
reductase [Neisseria meningitidis Z2491]
Length = 316
Score = 209 bits (527), Expect = 3e-53
Identities = 124/318 (38%), Positives = 188/318 (58%), Gaps = 21/318 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELAKR 93
+II+G+GPAGYTAA+YAAR L+ +IIT GG + T ++N+P +G+ G+EL R
Sbjct: 7 LIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMTTTEVDNWPADADGVQGTELMAR 66
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
H +++G ++IFD++ +D + F +K G EY +I+A GA + L
Sbjct: 67 FLAHAERFGTEIIFDQINAVDLQKRP-------FTLKGDMG-EYTCDALIVATGASAKYL 118
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F G+GVS CATCDG + ++V VVGGGNTA++EALYL +I VTL+HRR +
Sbjct: 119 GLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEALYLANIAKTVTLIHRRSE 178
Query: 214 FRADKILQD----RLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEKKVDGVF 268
FRA+KI+ D R+++ I L + + E+ G ++ V +LKN G + V G+F
Sbjct: 179 FRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNGALLKN-NDGSEQQIAVSGIF 237
Query: 269 IFIGYEPKTDFVKHLGITDEYGYIK-----VDMYMRTKVPGIFAAGDI-TNVFKQIAVAV 322
I IG++P TD K DE GY+K D T + G++AAGD+ + ++Q +
Sbjct: 238 IAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNIEGVWAAGDVKDHTYRQAITSA 297
Query: 323 GQGAIAANSAKEFIESWN 340
G AA A+ ++ S N
Sbjct: 298 ASGCQAALDAERWLGSQN 315
>emb|CAC12113.1| (AL445066) probable thioredoxin reductase [Thermoplasma
acidophilum]
Length = 319
Score = 209 bits (527), Expect = 3e-53
Identities = 129/311 (41%), Positives = 176/311 (56%), Gaps = 13/311 (4%)
Query: 25 SRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNM-AITDLIENYPGFPE 83
S ++ + +DV+I+GAG AG++AA+YAAR G I+ K + G + A L+ENY GF +
Sbjct: 9 SSEEKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGF-K 67
Query: 84 GISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTII 143
I GSELAK +H Y EV I + F+++T N Y K +I
Sbjct: 68 SIVGSELAKLFADHAANYAKIREGVEVRSIKKTQGG-------FDIET-NDDTYHAKYVI 119
Query: 144 IAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGV 203
I G + L V GE E+ G+G SYC+TCDG LF GK V+ +GGGN+ A+ +
Sbjct: 120 ITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVK 179
Query: 204 KVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEK 262
VT++ K+ + +K+ IP I+N VTEI G KV V K+ TGE
Sbjct: 180 NVTIIEYMPKYMCENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLI 239
Query: 263 KVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQIAV 320
+ DGVFI++G P+T F+K G+ DE GYI VD RT VPG++AAGD+T+ F QIA
Sbjct: 240 ETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNFAQIAS 299
Query: 321 AVGQGAIAANS 331
AVG G AA S
Sbjct: 300 AVGDGCKAALS 310
>pir||T42062 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Streptomyces
coelicolor >gi|1033064|emb|CAA63075.1| (X92104)
thioredoxin reductase [Streptomyces coelicolor]
Length = 320
Score = 209 bits (526), Expect = 4e-53
Identities = 124/316 (39%), Positives = 185/316 (58%), Gaps = 22/316 (6%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL--GGNMAITDLIENYPGFPEGISG 87
S V +VIIIG+GPAGYTAA+Y AR L ++ + GG + T +EN+PGF +GI G
Sbjct: 2 SDVRNVIIIGSGPAGYTAALYTARRSLKPLVFEGAVTAGGALMNTTEVENFPGFQDGIMG 61
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTAN---GKEYKGKTIII 144
EL M +G ++I D+VV +D + E+KT G ++ K +I+
Sbjct: 62 PELMDNMRAQADGFGAELIPDDVVAVDLSG----------EIKTVTDTAGTVHRAKAVIV 111
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
G++ RKL +P E +GRGVS+CATCDG F +++ V+ GG+TA++EA +L
Sbjct: 112 TTGSQHRKLGLPNEDALSGRGVSWCATCDGFFFKDQDIAVI-GGDTAMEEATFLSRFAKS 170
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKK 263
VT+VHRRD RA K +Q+R I + ++ V E++G K+ + L+NVKTGE +
Sbjct: 171 VTIVHRRDTLRASKAMQERAFADPKISFVWDSEVAEVQGDQKLAGLKLRNVKTGELSDLP 230
Query: 264 VDGVFIFIGYEPKTDFVK-HLGITDEYGYIKVDM-YMRTKVPGIFAAGDIT-NVFKQIAV 320
V +FI IG++P+T+ K L + E Y+KVD RT + G+F AGD+ + ++Q
Sbjct: 231 VTALFIAIGHDPRTELFKGQLDLDPE--YLKVDAPSTRTNLTGVFGAGDVVDHTYRQAIT 288
Query: 321 AVGQGAIAANSAKEFI 336
A G G AA A+ F+
Sbjct: 289 AAGTGCSAAVDAEPFL 304
>pir||C81097 thioredoxin reductase NMB1324 [imported] - Neisseria meningitidis
(group B strain MD58) >gi|7226566|gb|AAF41699.1|
(AE002480) thioredoxin reductase [Neisseria meningitidis
MC58]
Length = 316
Score = 208 bits (525), Expect = 6e-53
Identities = 124/318 (38%), Positives = 187/318 (57%), Gaps = 21/318 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELAKR 93
+II+G+GPAGYTAA+YAAR L+ +IIT GG + T ++N+P +G+ G EL R
Sbjct: 7 LIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMTTTEVDNWPADADGVQGPELMAR 66
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
H +++G ++IFD++ +D + F +K G EY +I+A GA + L
Sbjct: 67 FLAHAERFGTEIIFDQINAVDLQKRP-------FTLKGDMG-EYTCDALIVATGASAKYL 118
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F G+GVS CATCDG + ++V VVGGGNTA++EALYL +I VTL+HRR +
Sbjct: 119 GLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEALYLANIAKTVTLIHRRSE 178
Query: 214 FRADKILQD----RLKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEKKVDGVF 268
FRA+KI+ D R+++ I L + + E+ G ++ V +LKN G + V G+F
Sbjct: 179 FRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNGALLKN-NDGSEQQIAVSGIF 237
Query: 269 IFIGYEPKTDFVKHLGITDEYGYIK-----VDMYMRTKVPGIFAAGDI-TNVFKQIAVAV 322
I IG++P TD K DE GY+K D T + G++AAGD+ + ++Q +
Sbjct: 238 IAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNIEGVWAAGDVKDHTYRQAITSA 297
Query: 323 GQGAIAANSAKEFIESWN 340
G AA A+ ++ S N
Sbjct: 298 ASGCQAALDAERWLGSQN 315
>pir||A49911 NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -
Amphibacillus xylanus >gi|216220|dbj|BAA33809.1|
(AB018435) NADH oxidase [Amphibacillus xylanus]
Length = 509
Score = 208 bits (524), Expect = 8e-53
Identities = 126/318 (39%), Positives = 179/318 (55%), Gaps = 10/318 (3%)
Query: 21 GLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPG 80
G+ S ++E +DV++IG GPAG ++AIYAAR G+ II GG + T IEN+ G
Sbjct: 197 GIDASELNEKDPFDVLVIGGGPAGASSAIYAARKGIRVGIIADRFGGQVMDTLGIENFIG 256
Query: 81 FPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGK 140
+ G +L + +HV +Y +DV+ E FEV+ NG K K
Sbjct: 257 -TKYTEGPKLISEIEQHVNEYNIDVM-------KGLRAHNIEKKDLFEVQLDNGAVLKSK 308
Query: 141 TIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
TII+A GA R + VPGEKE+ +GV+YC CD PLF GK V VVGGGN+ ++ AL L
Sbjct: 309 TIILATGARWRDIGVPGEKEYKNKGVAYCTHCDAPLFEGKHVAVVGGGNSGIESALDLAG 368
Query: 201 IGVKVTLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGTNKVESVVLKNVKTGET 259
I VT+ + +AD +LQ+RL+ + ILN TEI G V+ + + T E
Sbjct: 369 IVKHVTVFEFMSELKADAVLQERLRSLPNVDVILNAQTTEITGDETVKGISYIDRTTNEE 428
Query: 260 FEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQI 318
++ G FI IG P T+++ ++ G I +D +T VPGIFAAGD T+ +KQI
Sbjct: 429 KHVELQGAFIQIGLAPNTEWLGDTVERNQIGEIVIDKKGQTSVPGIFAAGDCTDTPYKQI 488
Query: 319 AVAVGQGAIAANSAKEFI 336
V++G GA AA A +++
Sbjct: 489 IVSMGAGATAALGAFDYL 506
>sp|P26829|DHNA_BACSP NADH DEHYDROGENASE (ALKYL HYDROPEROXIDE REDUCTASE)
>gi|80165|pir||JX0166 NADH oxidase (hydrogen
peroxide-forming) (EC 1.6.-.-) - Bacillus sp. (strain
YN-1) >gi|216304|dbj|BAA01545.1| (D10701) NADH
dehydrogenase, alpha-2 subunit [Bacillus alcalophilus]
Length = 519
Score = 208 bits (523), Expect = 1e-52
Identities = 120/319 (37%), Positives = 184/319 (57%), Gaps = 12/319 (3%)
Query: 21 GLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPG 80
G S + + +DV+++G GPAG ++AIYAAR G+ T I+ GG + T IEN+
Sbjct: 197 GPDASELADKDPFDVLVVGGGPAGASSAIYAARKGIRTGIVADRFGGQIMDTLSIENFIS 256
Query: 81 FPEGISGSELAKRMYEHVKKYGVDVI-FDEVVRIDPAECAYYEGPCQFEVKTANGKEYKG 139
+ G +LA + EHVK+Y +DV+ R++ + E++ NG K
Sbjct: 257 -QKYTEGPKLAASLEEHVKEYDIDVMKLQRAKRLEKKDL--------IEIELENGAVLKS 307
Query: 140 KTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLH 199
K++I++ GA R + VPGE+EF +GV+YC CDGPLF GK+V V+GGGN+ ++ A+ L
Sbjct: 308 KSVILSTGARWRNVGVPGEQEFKNKGVAYCPHCDGPLFEGKDVAVIGGGNSGVEAAIDLA 367
Query: 200 SIGVKVTLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGTNKVESVVLKNVKTGE 258
I VT++ + +AD++LQ+RL + I N EI G +KV + + T E
Sbjct: 368 GIVNHVTVLEFMPELKADEVLQERLNSLPNVTVIKNAQTKEITGDDKVNGISYMDRDTEE 427
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQ 317
++ GVF+ IG P TD++ + +G I VD + T VPG+FAAGD TN +KQ
Sbjct: 428 VHHIELAGVFVQIGLVPNTDWLDGTLERNRFGEIVVDSHGATNVPGVFAAGDCTNSAYKQ 487
Query: 318 IAVAVGQGAIAANSAKEFI 336
I +++G GA AA A +++
Sbjct: 488 IIISMGSGATAALGAFDYL 506
>sp|P42974|DHNA_BACSU NADH DEHYDROGENASE (ALKYL HYDROPEROXIDE REDUCTASE)
>gi|7432661|pir||G69583 alkyl hydroperoxide reductase
(EC 1.6.-.-) large chain - Bacillus subtilis
>gi|1064783|dbj|BAA11269.1| (D78193) alkyl hydroperoxide
reductase [Bacillus subtilis]
>gi|2636557|emb|CAB16047.1| (Z99124) alkyl hydroperoxide
reductase (large subunit) and NADH dehydrogenase
[Bacillus subtilis]
Length = 509
Score = 208 bits (523), Expect = 1e-52
Identities = 117/319 (36%), Positives = 184/319 (57%), Gaps = 12/319 (3%)
Query: 21 GLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPG 80
G S + + +DV+++G GPAG +AAIY AR G+ T ++ + GG + T IEN+
Sbjct: 197 GTDASEFADKEPFDVLVVGGGPAGASAAIYTARKGIRTGVVAERFGGQVLDTMSIENFIS 256
Query: 81 FPEGISGSELAKRMYEHVKKYGVDVI-FDEVVRIDPAECAYYEGPCQFEVKTANGKEYKG 139
+ G +LA + EHVK+Y +DV+ R++ + FE++ NG K
Sbjct: 257 V-KATEGPKLAASLEEHVKEYDIDVMNLQRAKRLEKKDL--------FELELENGAVLKS 307
Query: 140 KTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLH 199
KT+I++ GA R ++VPGE+EF +GV+YC CDGPLF GK+V V+GGGN+ ++ A+ L
Sbjct: 308 KTVILSTGARWRNVNVPGEQEFKNKGVAYCPHCDGPLFEGKDVAVIGGGNSGIEAAIDLA 367
Query: 200 SIGVKVTLVHRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGE 258
I VT++ + +AD++LQ RL + + N EI G V + + +TGE
Sbjct: 368 GIVNHVTVLEFAPELKADEVLQKRLYSLPNVTVVKNAQTKEITGDQSVNGITYVDRETGE 427
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDIT-NVFKQ 317
++ GVF+ IG P T++++ + G I VD + T VPG+FAAGD T + + Q
Sbjct: 428 EKHVELQGVFVQIGLVPNTEWLEGTVERNRMGEIIVDKHGATSVPGLFAAGDCTDSAYNQ 487
Query: 318 IAVAVGQGAIAANSAKEFI 336
I +++G GA AA A +++
Sbjct: 488 IIISMGSGATAALGAFDYL 506
>sp|Q9Z8M4|TRXB_CHLPN THIOREDOXIN REDUCTASE (TRXR) >gi|7431887|pir||C72093 thioredoxin
reductase CP0444 [imported] - Chlamydophila pneumoniae
(strains CWL029 and AR39) >gi|4376591|gb|AAD18463.1|
(AE001616) Thioredoxin Reductase [Chlamydophila
pneumoniae CWL029] >gi|7189366|gb|AAF38283.1| (AE002205)
thioredoxin reductase [Chlamydophila pneumoniae AR39]
>gi|8978688|dbj|BAA98524.1| (AP002546) thioredoxin
reductase [Chlamydophila pneumoniae J138]
Length = 311
Score = 208 bits (523), Expect = 1e-52
Identities = 122/313 (38%), Positives = 181/313 (56%), Gaps = 19/313 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL----GGNMAITDLIENYPGFPEGISGSEL 90
+IIIG+GP+GYTAAIYA+R L ++ GG + T +EN+PGFPEGI G +L
Sbjct: 6 LIIIGSGPSGYTAAIYASRALLHPLLFEGFFSGISGGQLMTTTEVENFPGFPEGILGPKL 65
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
M E ++G + +++ +D + + + + + Y IIA GA
Sbjct: 66 MNNMKEQAVRFGTKTLAQDIISVDFSVRPF--------ILKSKEETYSCDACIIATGASA 117
Query: 151 RKLHVPG--EKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
++L +PG EF +GV+ CA CDG P+F K++ V+GGG++AL+EALYL G V
Sbjct: 118 KRLEIPGAGNDEFWQKGVTACAVCDGASPIFKNKDLYVIGGGDSALEEALYLTRYGSHVY 177
Query: 207 LVHRRDKFRADKILQDRLKQAGIPTIL-NTVVTEIRGTNKVESVVLKNVKTGETFEKKVD 265
+VHRRDK RA K ++ R + T L N+ + +I G + V SV +KNV+T E ++
Sbjct: 178 VVHRRDKLRASKAMEARAQNNEKITFLWNSEIVKISGDSIVRSVDIKNVQTQEITTREAA 237
Query: 266 GVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQIAVAVG 323
GVF IG++P TDF+ DE GYI + +T VPG+FAAGD+ + ++Q + G
Sbjct: 238 GVFFAIGHKPNTDFLGGQLTLDESGYIVTEKGTSKTSVPGVFAAGDVQDKYYRQAVTSAG 297
Query: 324 QGAIAANSAKEFI 336
G IAA A+ F+
Sbjct: 298 SGCIAALDAERFL 310
>gb|AAD29664.1|AF124757_24 (AF124757) thioredoxin reductase [Zymomonas mobilis]
Length = 318
Score = 208 bits (523), Expect = 1e-52
Identities = 129/309 (41%), Positives = 183/309 (58%), Gaps = 15/309 (4%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGISGSELAKR 93
V I+G+GPAG TAAIYAAR GL+ I+ GG + IT +EN+PGF E I G L +
Sbjct: 10 VFILGSGPAGLTAAIYAARAGLNPIVAQGLQPGGQLTITTEVENFPGFREPIQGPWLMEE 69
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M + G +++D + +D ++ Y + G+ Y ++II+ GA+ R L
Sbjct: 70 MQAQAENVGAKLVWDIITSVDFSQRPY-------RLMGDGGQVYLADSLIISTGAQARWL 122
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+ E G+G+S CATCDG F GK+V+V+GGGNTA++EALYL + +VTL+HRRD
Sbjct: 123 GLESETALRGKGISACATCDGFFFRGKKVVVIGGGNTAVEEALYLTNHSPEVTLIHRRDS 182
Query: 214 FRADKILQDR-LKQAGIPTILNTVVTE-IRGTNKVESVV-LKNVKTGETFEKKVDGVFIF 270
RA+KI+Q R L I N+ V E I G + S V LK+ KTGE + +G FI
Sbjct: 183 LRAEKIMQKRLLANPKIKIRWNSEVAEFIAGEDSALSAVKLKDTKTGEESLLETEGAFIA 242
Query: 271 IGYEPKTD-FVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITNV-FKQIAVAVGQGAI 327
IG++P T+ F HL + DE GYI+V +T + GIFA GD+ + ++Q A G G +
Sbjct: 243 IGHKPATELFQGHLKLDDE-GYIEVTPGTTQTSIKGIFACGDVMDKHYRQAVTAAGTGCM 301
Query: 328 AANSAKEFI 336
AA A+ F+
Sbjct: 302 AALEAERFL 310
>gb|AAD52148.1|AF129406_2 (AF129406) alkyl hydroperoxide reductase subunit F [Bacteroides
fragilis]
Length = 516
Score = 206 bits (520), Expect = 2e-52
Identities = 121/311 (38%), Positives = 189/311 (59%), Gaps = 18/311 (5%)
Query: 31 KVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSEL 90
K +DVI+ G GPAG AAIY+AR GL+ +I + +GG + T IEN P +GS+L
Sbjct: 210 KKYDVIVAGGGPAGSAAAIYSARKGLNVAVIAERIGGQVKETVGIENLISVPS-TTGSQL 268
Query: 91 AKRMYEHVKKYGVDVIFD---EVVRIDPAECAYYEGPCQFEVKTANGKE-YKGKTIIIAV 146
A + H+ +Y +D++ E + +D + +V TA G E + +I+A
Sbjct: 269 ADNLKTHMSQYPIDLLEHRQIEKIELDGKD----------KVLTAKGGERFSAPAVIVAT 318
Query: 147 GAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
GA RKL+VPGE E+ GRGV++C CDGP + GK+V VVGGGN+ ++ A+ L I KVT
Sbjct: 319 GASWRKLNVPGEAEYIGRGVAFCPHCDGPFYKGKQVAVVGGGNSGIEAAIDLAGICSKVT 378
Query: 207 LVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEKKV 264
++ D+ +AD++LQ++LK + ++++ TE+ G +KV + +K+ KT E +
Sbjct: 379 VLEFMDELKADQVLQEKLKSLPNVEVLVHSQTTEVVGNGDKVTGIRVKDRKTEEERVISL 438
Query: 265 DGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVG 323
DG+F+ IG + + + + G I +D + RT VPGI+AAGD++ V +KQI +A+G
Sbjct: 439 DGIFVQIGLVANSGIFRDVVEVNRPGEIVIDAHCRTNVPGIYAAGDVSTVPYKQIIIAMG 498
Query: 324 QGAIAANSAKE 334
+GA AA +A E
Sbjct: 499 EGAKAALAAFE 509
>pir||G64491 thioredoxin reductase (NADPH) (EC 1.6.4.5) - Methanococcus
jannaschii >gi|1592167|gb|AAB99556.1| (U67594)
thioredoxin reductase (trxB) [Methanococcus jannaschii]
Length = 301
Score = 206 bits (518), Expect = 4e-52
Identities = 124/310 (40%), Positives = 182/310 (58%), Gaps = 16/310 (5%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKD-LGGNMAITDLIENYPGFPEGISGSEL 90
+ D IIIGAGP G TA IYA R L+ + I K+ GG +A ++ENYPGF E I G EL
Sbjct: 2 IHDTIIIGAGPGGLTAGIYAMRGKLNALCIEKENAGGRIAEAGIVENYPGFEE-IRGYEL 60
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
A++ H +K+ + +I+DEV++I+ E F+V T N EY KTI+IA G +P
Sbjct: 61 AEKFKNHAEKFKLPIIYDEVIKIETKERP-------FKVITKNS-EYLTKTIVIATGTKP 112
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
+KL + E +F GRG+SYC CD ++ KEVIV+G A+ A+ L I KV ++
Sbjct: 113 KKLGL-NEDKFIGRGISYCTMCDAFFYLNKEVIVIGRDTPAIMSAINLKDIAKKVIVITD 171
Query: 211 RDKFR-ADKILQDRLKQA-GIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVF 268
+ + + A+ I+ D+LK+A + I N EI G + E V K G+ K DG+F
Sbjct: 172 KSELKAAESIMLDKLKEANNVEIIYNAKPLEIVGEERAEGV--KISVNGKEEIIKADGIF 229
Query: 269 IFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAI 327
I +G+ P T+F+K GI D+ G+IK D RT + GI+A GD+ Q+A AVG G +
Sbjct: 230 ISLGHVPNTEFLKDSGIELDKKGFIKTDENCRTNIDGIYAVGDVRGGVMQVAKAVGDGCV 289
Query: 328 AANSAKEFIE 337
A + ++++
Sbjct: 290 AMANIIKYLQ 299
>pir||C82231 thioredoxin reductase VC1182 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9655659|gb|AAF94341.1| (AE004198)
thioredoxin reductase [Vibrio cholerae]
Length = 318
Score = 206 bits (518), Expect = 4e-52
Identities = 126/325 (38%), Positives = 193/325 (58%), Gaps = 22/325 (6%)
Query: 25 SRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPE 83
S V SK+ +I+G+GPAGYTAA+YAAR L +++T GG + T +EN+PG E
Sbjct: 2 SNVKHSKL---LILGSGPAGYTAAVYAARANLKPVLVTGMQQGGQLTTTTEVENWPGDAE 58
Query: 84 GISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTII 143
G++G L +RM EH +++ +++FD + +D + + T + +EY +I
Sbjct: 59 GLTGPALMERMKEHAERFDTEIVFDHINSVDLSSRPFR--------LTGDSQEYTCDALI 110
Query: 144 IAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGV 203
I+ GA + L + E+ F GRGVS CATCDG + ++V VVGGGNTA++EALYL +I
Sbjct: 111 ISTGASAKYLGLESEEAFKGRGVSACATCDGFFYRNQKVAVVGGGNTAVEEALYLSNIAS 170
Query: 204 KVTLVHRRDKFRADKILQDRL--KQAGIPTILNT--VVTEIRGTNK-VESVVLKNVKTGE 258
+V LVHRRD FR++KIL DRL K A +L+T + E+ G V V LK+ ++
Sbjct: 171 EVHLVHRRDSFRSEKILIDRLMDKVANGNIVLHTHRTLDEVLGDEMGVTGVRLKDTQSDM 230
Query: 259 TFEKKVDGVFIFIGYEPKTD-FVKHLGITDEYGYIKVDM---YMRTKVPGIFAAGDI-TN 313
T V GVFI IG++P + F L + + Y +K + +T + G+FAAGD+ +
Sbjct: 231 TENLDVMGVFIAIGHQPNSQIFEGQLEMKNGYIVVKSGLEGNATQTSIEGVFAAGDVMDH 290
Query: 314 VFKQIAVAVGQGAIAANSAKEFIES 338
++Q + G G +AA A+ +++S
Sbjct: 291 NYRQAITSAGTGCMAALDAERYLDS 315
>pir||F83318 thioredoxin reductase 1 PA2616 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948682|gb|AAG06004.1|AE004690_4
(AE004690) thioredoxin reductase 1 [Pseudomonas
aeruginosa]
Length = 316
Score = 205 bits (517), Expect = 5e-52
Identities = 124/324 (38%), Positives = 192/324 (58%), Gaps = 23/324 (7%)
Query: 27 VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGI 85
+ E K +II+G+GPAGYTAA+YAAR L ++IT GG + T ++N+PG EG+
Sbjct: 1 MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITGIQPGGQLTTTTEVDNWPGDVEGL 60
Query: 86 SGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
+G L RM +H +++ ++++D + + + F +K +G Y +IIA
Sbjct: 61 TGPALMTRMQQHAERFDTEIVYDHIHTAELQQRP-------FTLKGDSGT-YTCDALIIA 112
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
GA + L + E+ F G+GVS CATCDG + + V VVGGGNTA++EALYL +I +V
Sbjct: 113 TGASAQYLGMSSEEAFMGKGVSACATCDGFFYRNQVVCVVGGGNTAVEEALYLANIAKEV 172
Query: 206 TLVHRRDKFRADKILQDRL----KQAGIPTILNTVVTEIRG-TNKVESVVLKNVKTGETF 260
L+HRRDK R++KILQD+L + + NT + E+ G + V V LK+ G T
Sbjct: 173 HLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGVTGVRLKSTIDGSTS 232
Query: 261 EKKVDGVFIFIGYEPKTD-FVKHLGITDEYGYIKV-----DMYMRTKVPGIFAAGDIT-N 313
E + GVFI IG++P TD F L + D GY+++ +T + G+FAAGD+ +
Sbjct: 233 ELSLAGVFIAIGHKPNTDLFQGQLEMRD--GYLRIHGGSEGNATQTSIEGVFAAGDVADH 290
Query: 314 VFKQIAVAVGQGAIAANSAKEFIE 337
V++Q + G G +AA A+++++
Sbjct: 291 VYRQAITSAGAGCMAALDAEKYLD 314
>pir||F82681 thioredoxin reductase XF1448 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106466|gb|AAF84257.1|AE003974_12
(AE003974) thioredoxin reductase [Xylella fastidiosa]
Length = 321
Score = 205 bits (515), Expect = 9e-52
Identities = 119/319 (37%), Positives = 185/319 (57%), Gaps = 23/319 (7%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+GPAG+TAA+YAAR L ++IT GG + T ++N+PG G+ G +L +R
Sbjct: 13 LLILGSGPAGWTAAVYAARANLQPVLITGLQQGGQLMTTTEVDNWPGDAHGLMGPDLMER 72
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M H +++ VIFD++ + D + + + Y +IIA GA + L
Sbjct: 73 MQAHAERFDTKVIFDQIYKADLSTRPF--------TLFGDSGLYTCDGLIIATGANAKYL 124
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+P E+ F GRGVS CATCDG + ++V V+GGGNTA++EALYL +I KV L+HRRDK
Sbjct: 125 GIPSEEAFKGRGVSACATCDGFFYRDQDVAVIGGGNTAVEEALYLSNIARKVYLIHRRDK 184
Query: 214 FRADKILQDRL----KQAGIPTILNTVVTEIRGTN-KVESVVLKNVKTGETFEKKVDGVF 268
RA+KI+Q++L I I N V E+ G + V V +++ + T + V G+F
Sbjct: 185 LRAEKIMQNKLFSKAATGKIELIWNNAVEEVLGNDASVTGVRIRSTQDSSTRDIDVQGLF 244
Query: 269 IFIGYEPKTD-FVKHLGITDEYGYIKVDM-----YMRTKVPGIFAAGDITNV-FKQIAVA 321
+ IG+ P TD F L + + GY+++ +T V G+FAAGD+ + ++Q +
Sbjct: 245 VAIGHHPNTDLFAGQLAMNN--GYLQIHSGTAGNVTQTSVEGVFAAGDVADQHYRQAITS 302
Query: 322 VGQGAIAANSAKEFIESWN 340
G G +AA A+ F++ N
Sbjct: 303 AGFGCMAALDAERFLDKGN 321
>pir||D64794 alkyl hydroperoxide reductase (EC 1.6.4.-) F52A protein -
Escherichia coli >gi|1778524|gb|AAB40807.1| (U82598)
AhpF homolog [Escherichia coli]
>gi|1786823|gb|AAC73707.1| (AE000166) alkyl
hydroperoxide reductase, F52a subunit; detoxification of
hydroperoxides [Escherichia coli K12]
Length = 531
Score = 203 bits (512), Expect = 2e-51
Identities = 124/331 (37%), Positives = 199/331 (59%), Gaps = 11/331 (3%)
Query: 12 EVVKMFSLGGLGKSRVDESK--VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNM 69
E+V G ++ + +K +DV+I+G+GPAG AAIY+AR G+ T ++ + GG +
Sbjct: 200 EIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQI 259
Query: 70 AITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVV-RIDPAECAYYEGPCQFE 128
T IENY P+ G +LA + HV +Y VDVI + ++ PA EG +
Sbjct: 260 LDTVDIENYISVPK-TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAV---EGGLH-Q 314
Query: 129 VKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGG 188
++TA+G K ++II+A GA+ R ++VPGE ++ +GV+YC CDGPLF GK V V+GGG
Sbjct: 315 IETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGG 374
Query: 189 NTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGT-NKV 246
N+ ++ A+ L I VTL+ + +AD++LQD+L+ + ILN TE++G +KV
Sbjct: 375 NSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKV 434
Query: 247 ESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIF 306
+ ++ +G+ ++ G+F+ IG P T++++ + G I +D T V G+F
Sbjct: 435 VGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVF 494
Query: 307 AAGDITNV-FKQIAVAVGQGAIAANSAKEFI 336
AAGD T V +KQI +A G+GA A+ SA +++
Sbjct: 495 AAGDCTTVPYKQIIIATGEGAKASLSAFDYL 525
>pir||D83627 alkyl hydroperoxide reductase subunit F PA0140 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9945970|gb|AAG03530.1|AE004452_2 (AE004452) alkyl
hydroperoxide reductase subunit F [Pseudomonas
aeruginosa]
Length = 521
Score = 203 bits (512), Expect = 2e-51
Identities = 123/304 (40%), Positives = 182/304 (59%), Gaps = 9/304 (2%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSELAK 92
+DV+++G GPAG AAIYAAR G+ T + + GG + T IEN+ E G +LA+
Sbjct: 212 FDVLVVGGGPAGAAAAIYAARKGIRTGVAAERFGGQVLDTMAIENFISVQE-TEGPKLAR 270
Query: 93 RMYEHVKKYGVDVI-FDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+ EHV+ Y VD++ ++ PA+ A G EV+ +G K KT+I+A GA R
Sbjct: 271 ALEEHVRHYEVDIMNLQRASKLVPAKNA---GELH-EVRFESGGSLKAKTLILATGARWR 326
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
++ VPGE+E+ +GV +C CDGPLF GK V V+GGGN+ ++ A+ L I VTL+
Sbjct: 327 EMGVPGEQEYKAKGVCFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLLEFD 386
Query: 212 DKFRADKILQDRL-KQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEKKVDGVFI 269
K RAD +LQ +L + I + + +E++G KV +V K+ + E +++G+F+
Sbjct: 387 SKLRADAVLQRKLYSLPNVEVITSALTSEVKGDGQKVTGLVYKDRNSEEFKSIELEGIFV 446
Query: 270 FIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGAIA 328
IG P T+++K G I VD T +PGIFAAGD+T V +KQI +AVG+GA A
Sbjct: 447 QIGLLPNTEWLKGSVELSPRGEIIVDARGETSLPGIFAAGDVTTVPYKQIVIAVGEGAKA 506
Query: 329 ANSA 332
+ SA
Sbjct: 507 SLSA 510
>sp|P35340|AHPF_ECOLI ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (ALKYL HYDROPEROXIDE
REDUCTASE F52A PROTEIN) >gi|1651247|dbj|BAA35236.1|
(D90701) Alkyl hydroperoxide reductase F52a protein (EC
1.6.4.-) . [Escherichia coli]
>gi|1651252|dbj|BAA35245.1| (D90702) Alkyl hydroperoxide
reductase F52a protein (EC 1.6.4.-) . [Escherichia coli]
Length = 521
Score = 203 bits (512), Expect = 2e-51
Identities = 124/331 (37%), Positives = 199/331 (59%), Gaps = 11/331 (3%)
Query: 12 EVVKMFSLGGLGKSRVDESK--VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNM 69
E+V G ++ + +K +DV+I+G+GPAG AAIY+AR G+ T ++ + GG +
Sbjct: 190 EIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQI 249
Query: 70 AITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVV-RIDPAECAYYEGPCQFE 128
T IENY P+ G +LA + HV +Y VDVI + ++ PA EG +
Sbjct: 250 LDTVDIENYISVPK-TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAV---EGGLH-Q 304
Query: 129 VKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGG 188
++TA+G K ++II+A GA+ R ++VPGE ++ +GV+YC CDGPLF GK V V+GGG
Sbjct: 305 IETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGG 364
Query: 189 NTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGT-NKV 246
N+ ++ A+ L I VTL+ + +AD++LQD+L+ + ILN TE++G +KV
Sbjct: 365 NSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKV 424
Query: 247 ESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIF 306
+ ++ +G+ ++ G+F+ IG P T++++ + G I +D T V G+F
Sbjct: 425 VGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVF 484
Query: 307 AAGDITNV-FKQIAVAVGQGAIAANSAKEFI 336
AAGD T V +KQI +A G+GA A+ SA +++
Sbjct: 485 AAGDCTTVPYKQIIIATGEGAKASLSAFDYL 515
>sp|P19480|AHPF_SALTY ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (ALKYL HYDROPEROXIDE
REDUCTASE F52A PROTEIN) >gi|96722|pir||B35441 alkyl
hydroperoxide reductase (EC 1.6.-.-) F52a protein -
Salmonella typhimurium >gi|153863|gb|AAA16432.1|
(J05478) alkyl hydroperoxide reductase [Salmonella
typhimurium]
Length = 521
Score = 200 bits (504), Expect = 2e-50
Identities = 119/314 (37%), Positives = 190/314 (59%), Gaps = 9/314 (2%)
Query: 27 VDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGIS 86
+++ +DV+I+G+GPAG AA+Y+AR G+ T ++ + GG + T IENY P+
Sbjct: 207 LNKRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPK-TE 265
Query: 87 GSELAKRMYEHVKKYGVDVIFDEVV-RIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
G +LA + HV Y VDVI + ++ PA EG +++TA+G K ++IIIA
Sbjct: 266 GQKLAGALKAHVSDYDVDVIDSQSASKLVPAAT---EGGLH-QIETASGAVLKARSIIIA 321
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
GA+ R ++VPGE ++ +GV+YC CDGPLF GK V V+GGGN+ ++ A+ L I V
Sbjct: 322 TGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHV 381
Query: 206 TLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGT-NKVESVVLKNVKTGETFEKK 263
TL+ + +AD++LQD+++ + ILN TE++G +KV + ++ +G+
Sbjct: 382 TLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVA 441
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAV 322
+ G+F+ IG P T +++ + G I +D T V G+FAAGD T V +KQI +A
Sbjct: 442 LAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIAT 501
Query: 323 GQGAIAANSAKEFI 336
G+GA A+ SA +++
Sbjct: 502 GEGAKASLSAFDYL 515
>sp|P56431|TRXB_HELPY THIOREDOXIN REDUCTASE (TRXR) >gi|7427757|pir||A64623 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Helicobacter pylori
(strain 26695) >gi|2313959|gb|AAD07875.1| (AE000594)
thioredoxin reductase (trxB) [Helicobacter pylori 26695]
Length = 311
Score = 200 bits (503), Expect = 2e-50
Identities = 125/315 (39%), Positives = 176/315 (55%), Gaps = 19/315 (6%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGL-DTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
D IIG GPAG +A +YA R G+ + ++ K + GG + + IENYPG E +SG +
Sbjct: 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFM 62
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+ E ++G+ V R+ + F + +GK ++ K++IIA G P+
Sbjct: 63 QPWQEQCFRFGLKHEMTAVQRVSKKDS-------HFVILAEDGKTFEAKSVIIATGGSPK 115
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
+ + GE E+ G+GVS CATCDG + KEV V+GGG+TA++EA+YL +I KV L+HRR
Sbjct: 116 RTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRR 175
Query: 212 DKFRADKILQDRLKQAG-IPTILNTVVTEIRG-TNKVESVVLKNVKTGETFEKKVDGVFI 269
D FR I + K I + VV EI+G + V S+ +KN T E E V G FI
Sbjct: 176 DGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFI 235
Query: 270 FIGYEPKTDFVKH-----LGITDEYGYIKVDMYMRTKVPGIFAAGDITNVF--KQIAVAV 322
F+GY+ +K L DEYG I VD M+T V G+FAAGDI +F KQ+ A
Sbjct: 236 FVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDI-RIFAPKQVVCAA 294
Query: 323 GQGAIAANSAKEFIE 337
GA AA S ++E
Sbjct: 295 SDGATAALSVISYLE 309
>sp|Q9ZL18|TRXB_HELPJ THIOREDOXIN REDUCTASE (TRXR) >gi|7431884|pir||D71890 thioredoxin
reductase - Helicobacter pylori (strain J99)
>gi|4155329|gb|AAD06343.1| (AE001507) THIOREDOXIN
REDUCTASE [Helicobacter pylori J99]
Length = 311
Score = 200 bits (503), Expect = 2e-50
Identities = 124/315 (39%), Positives = 178/315 (56%), Gaps = 19/315 (6%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGL-DTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
D IIG GPAG +A +YA R G+ + ++ K + GG + + IENYPG E +SG +
Sbjct: 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFM 62
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+ E ++G+ + R+ + F + +GK ++ K++IIA G P+
Sbjct: 63 QPWQEQCFRFGLKHEMTAIQRVS-------KKGSHFVILAEDGKTFEAKSVIIATGGSPK 115
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
+ + GE E+ G+GVS CATCDG + KEV V+GGG+TA++EA+YL +I KV L+HRR
Sbjct: 116 RTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRR 175
Query: 212 DKFRADKILQDRLK-QAGIPTILNTVVTEIRG-TNKVESVVLKNVKTGETFEKKVDGVFI 269
D FR I + K + I + VV EI+G + V S+ +KN T E E V G+FI
Sbjct: 176 DGFRCAPITLEHAKNNSKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGLFI 235
Query: 270 FIGYEPKTDFVKH-----LGITDEYGYIKVDMYMRTKVPGIFAAGDITNVF--KQIAVAV 322
F+GY+ +K L DEYG I VD M+T V G+FAAGDI +F KQ+ A
Sbjct: 236 FVGYDVNNAVLKQEDNSMLCECDEYGSIVVDFSMKTNVQGLFAAGDI-RIFAPKQVVCAA 294
Query: 323 GQGAIAANSAKEFIE 337
GA AA S ++E
Sbjct: 295 SDGATAALSVISYLE 309
>sp|P51978|TRXB_NEUCR THIOREDOXIN REDUCTASE >gi|11253111|pir||T47256 thioredoxin
reductase (NADPH) (EC 1.6.4.5) [imported] - Neurospora
crassa >gi|757510|dbj|BAA08090.1| (D45049) Thioredoxin
Reductase (NADPH) [Neurospora crassa]
Length = 334
Score = 199 bits (502), Expect = 3e-50
Identities = 116/315 (36%), Positives = 185/315 (57%), Gaps = 18/315 (5%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDLIENYPGFPEGISGS 88
V+IIG+GPA +TAAIY AR L ++ + GG + T IEN+PGFP+GI G
Sbjct: 5 VVIIGSGPAAHTAAIYLARAELKPVLYEGFMANGIAAGGQLTTTTEIENFPGFPDGIMGQ 64
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
EL +M +++G +I + V ++D + P ++ + + + + +II+A GA
Sbjct: 65 ELMDKMKAQSERFGTQIISETVAKVDLSA-----RPFKYATEWSPEEYHTADSIILATGA 119
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
R+LH+PGE+++ G+S CA CDG P+F K ++V+GGG++A +EA+YL G VT
Sbjct: 120 SARRLHLPGEEKYWQNGISACAVCDGAVPIFRNKHLVVIGGGDSAAEEAMYLTKYGSHVT 179
Query: 207 LVHRRDKFRADKILQDRLKQAGIPTI-LNTVVTEIRGTNK--VESVVLKNVKTGETFEKK 263
++ R+DK RA I+ RL T+ NTV E++G +K + +V+K+V TG+ +
Sbjct: 180 VLVRKDKLRASSIMAHRLLNHEKVTVRFNTVGVEVKGDDKGLMSHLVVKDVTTGKEETLE 239
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITNV-FKQIAVA 321
+G+F IG++P T VK TD GY+ T V G+FAAGD+ + ++Q +
Sbjct: 240 ANGLFYAIGHDPATALVKGQLETDADGYVVTKPGTTLTSVEGVFAAGDVQDKRYRQAITS 299
Query: 322 VGQGAIAANSAKEFI 336
G G +AA A++F+
Sbjct: 300 AGTGCMAALDAEKFL 314
>sp|O05204|AHPF_STAAU ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F >gi|1916317|gb|AAB51152.1|
(U92441) alkyl hydroperoxide reductase subunit F
[Staphylococcus aureus]
Length = 507
Score = 199 bits (501), Expect = 4e-50
Identities = 118/318 (37%), Positives = 181/318 (56%), Gaps = 17/318 (5%)
Query: 25 SRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEG 84
S + + +DV+I+G GPA +AAIY AR GL T I+ +GG + T IEN+ E
Sbjct: 198 SEFENKEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKE- 256
Query: 85 ISGSELAKRMYEHVKKYGVDVIFD----EVVRIDPAECAYYEGPCQFEVKTANGKEYKGK 140
+GSE + + H+ +Y +D + ++ + D A +V NG + K
Sbjct: 257 TTGSEFSSNLAAHIDQYDIDAMTGIRATDIEKTDEA----------IKVTLENGAVLESK 306
Query: 141 TIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
T+IIA GA RKL++PGE++ +GV++C CDGPLF K+V V+GGGN+ ++ A+ L
Sbjct: 307 TVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAG 366
Query: 201 IGVKVTLVHRRDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGTNKVESVVLKNVKTGET 259
I VTL + +AD +LQDRL+ + + N TE+ G + V + +++ TGE
Sbjct: 367 IVNHVTLFEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMNTGEE 426
Query: 260 FEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQI 318
+DG+F+ IG P T ++ +E G I +D T VPGIFAAGD+T+ KQI
Sbjct: 427 HLLNLDGIFVQIGLLPNTSWLNDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQI 486
Query: 319 AVAVGQGAIAANSAKEFI 336
+++G GA AA +A ++I
Sbjct: 487 IISMGAGANAALNAFDYI 504
>pir||T00824 thioredoxin reductase homolog T32G6.20 - Arabidopsis thaliana
>gi|2618704|gb|AAB84351.1| (AC002510) putative
thioredoxin reductase [Arabidopsis thaliana]
Length = 535
Score = 199 bits (501), Expect = 4e-50
Identities = 122/319 (38%), Positives = 182/319 (56%), Gaps = 20/319 (6%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-----GGNMAITDLIENYPGFPEGISGS 88
+V+IIG+GPAGYTAAIYAAR L ++ GG + T +EN+PGFP+GI+G
Sbjct: 85 NVVIIGSGPAGYTAAIYAARANLKPVVFEGYQMGGVPGGQLMTTTEVENFPGFPDGITGP 144
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
+L ++M + +++G ++ ++V + F V+T+ K K +II A GA
Sbjct: 145 DLMEKMRKQAERWGAELYPEDVESLSVTTAP-------FTVQTSERK-VKCHSIIYATGA 196
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
R+L +P E+EF RG+S CA CDG PLF G+ + VVGGG+TA +EALYL V
Sbjct: 197 TARRLRLPREEEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEALYLTKYARHVH 256
Query: 207 LVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK--VESVVLKNVKTGETFEKK 263
L+ RRD+ RA K +QDR + I NT ++ K + ++L+ + TGE E +
Sbjct: 257 LLVRRDQLRASKAMQDRVINNPNITVHYNTETVDVLSNTKGQMSGILLRRLDTGEETELE 316
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIKV-DMYMRTKVPGIFAAGDI-TNVFKQIAVA 321
G+F IG+ P + ++ D GY+ V + T V G+FAAGD+ + ++Q A
Sbjct: 317 AKGLFYGIGHSPNSQLLEGQVELDSSGYVLVREGTSNTSVEGVFAAGDVQDHEWRQAVTA 376
Query: 322 VGQGAIAANSAKEFIESWN 340
G G IAA SA+ ++ S N
Sbjct: 377 AGSGCIAALSAERYLTSNN 395
>sp|P39916|TRXB_COXBU THIOREDOXIN REDUCTASE (TRXR) >gi|1075485|pir||S43131 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Coxiella burnetii
>gi|468528|emb|CAA53288.1| (X75627) thioredoxin
reductase (NADPH) [Coxiella burnetii]
Length = 321
Score = 198 bits (499), Expect = 7e-50
Identities = 122/319 (38%), Positives = 182/319 (56%), Gaps = 21/319 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAKR 93
+II+G+GPAGYT AIY AR L I+IT + GG + T + N+PG G+ G +L +R
Sbjct: 9 LIILGSGPAGYTDAIYVARANLKPIMITGMEQGGQLMTTTDVANWPGEAPGLQGPKLLER 68
Query: 94 MYEHVK-KYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRK 152
M +H IFD + + D P F ++ N Y +IIA GA R
Sbjct: 69 MQKHAGGALNTQFIFDHINKPDL-------NPRPFLLQGDNAT-YSCDALIIATGASARY 120
Query: 153 LHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRD 212
L +P EK + G+GVS CATCDG + K+V VVGGGNT+++EALYL I VTL+HRRD
Sbjct: 121 LGLPSEKPYMGKGVSACATCDGFFYRAKKVAVVGGGNTSVEEALYLSHIASHVTLIHRRD 180
Query: 213 KFRADKILQDRL----KQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEKKVDGV 267
K RA+K+L +L ++ + + + V+ E+ G ++ V V LK+VK +T + +DG+
Sbjct: 181 KLRAEKMLSAQLIKKVEEGKVAIVWSHVIEEVLGDDQGVTGVHLKHVKEEKTQDLTIDGL 240
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDMYMR-----TKVPGIFAAGDIT-NVFKQIAVA 321
FI IG++P T K DE GY++ ++ T +PG+F A + +++Q A
Sbjct: 241 FIAIGHDPNTKIFKEQLEMDEAGYLRAKSGLQGNATATNIPGVFPAVVVRGQLYRQTIAA 300
Query: 322 VGQGAIAANSAKEFIESWN 340
G G + A A+ +++S N
Sbjct: 301 AGMGCMPALDAERYLDSLN 319
>gi|6320560 Thioredoxin reductase; Trr1p [Saccharomyces cerevisiae]
>gi|1717781|sp|P29509|TRB1_YEAST THIOREDOXIN REDUCTASE 1
>gi|2117554|pir||S61150 thioredoxin reductase (NADPH)
(EC 1.6.4.5) TRR1 [validated] - yeast (Saccharomyces
cerevisiae) >gi|849175|gb|AAB64789.1| (U28372) Similar
to Thioredoxin reductase (Swiss Prot. accession numbers
P09625 and Q05741), Alkyl hydroperoxide reductase F52A
protein (Swiss Prot. accession number P19480), NADH
Dehydrogenase (Swiss Prot. accession number P26829), and
other pyridine >
Length = 319
Score = 198 bits (498), Expect = 9e-50
Identities = 122/319 (38%), Positives = 183/319 (57%), Gaps = 22/319 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDLIENYPGFPEGISGS 88
V IIG+GPA +TAAIY AR + I+ + GG + T IEN+PGFP+G++GS
Sbjct: 6 VTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 65
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKT---IIIA 145
EL RM E K+G ++I + V ++D + F++ T ++ + T II+A
Sbjct: 66 ELMDRMREQSTKFGTEIITETVSKVDLSS-------KPFKLWTEFNEDAEPVTTDAIILA 118
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGV 203
GA +++H+PGE+ + +G+S CA CDG P+F K + V+GGG++A +EA +L G
Sbjct: 119 TGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGS 178
Query: 204 KVTLVHRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFE 261
KV ++ R+D RA I+Q R K I + NTV E +G K + ++ +KN K E +
Sbjct: 179 KVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETD 238
Query: 262 KKVDGVFIFIGYEPKTDFVKHLGITDEYGYIK-VDMYMRTKVPGIFAAGDI-TNVFKQIA 319
V G+F IG+ P T V TDE GYIK V T VPG FAAGD+ + ++Q
Sbjct: 239 LPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAI 298
Query: 320 VAVGQGAIAANSAKEFIES 338
+ G G +AA A++++ S
Sbjct: 299 TSAGSGCMAALDAEKYLTS 317
>sp|P47348|TRXB_MYCGE THIOREDOXIN REDUCTASE (TRXR) >gi|1361862|pir||C64211 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Mycoplasma genitalium
>gi|3844690|gb|AAC71320.1| (U39690) thioredoxin
reductase (trxB) [Mycoplasma genitalium]
Length = 315
Score = 198 bits (498), Expect = 9e-50
Identities = 117/309 (37%), Positives = 177/309 (56%), Gaps = 12/309 (3%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSEL 90
++D++I+GAGPAG +AIY R L+ II + GG + T+++ENYPGF + I+G EL
Sbjct: 15 IYDLVIVGAGPAGIASAIYGKRANLNLAIIEGNTPGGKIVKTNIVENYPGF-KTITGPEL 73
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
MY H+ + V ++ +++ID F + N KT+I A G E
Sbjct: 74 GLEMYNHLLAFEPVVFYNNLIKIDHLNDT-------FILYLDNKTTVFSKTVIYATGMEE 126
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
RKL + E F G+G+SYCA CD L+ GK V VVGGGN+A+QEA+YL SI V L+HR
Sbjct: 127 RKLGIEKEDYFYGKGISYCAICDAALYKGKTVGVVGGGNSAIQEAIYLSSIAKTVHLIHR 186
Query: 211 RDKFRADKILQDRLKQ-AGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFI 269
R+ FR+D +L ++LK+ + + LN V ++ G K+++V L + E +D +F
Sbjct: 187 REVFRSDALLVEKLKKISNVVFHLNATVKQLIGQEKLQTVKLASTVDKSESEIAIDCLFP 246
Query: 270 FIGYEPKTDFVKHLGIT-DEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQGAI 327
+IG+E V L + D+ G+I D M+T + G + AGD + F+QIA A+ G
Sbjct: 247 YIGFESNNKPVLDLKLNLDQNGFILGDENMQTNIKGFYVAGDCRSKSFRQIATAISDGVT 306
Query: 328 AANSAKEFI 336
A ++ I
Sbjct: 307 AVLKVRDDI 315
>pir||F82936 thioredoxin reductase UU074 [imported] - Ureaplasma urealyticum
>gi|6899025|gb|AAF30479.1|AE002107_3 (AE002107)
thioredoxin reductase [Ureaplasma urealyticum]
Length = 309
Score = 198 bits (498), Expect = 9e-50
Identities = 122/310 (39%), Positives = 176/310 (56%), Gaps = 13/310 (4%)
Query: 31 KVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSE 89
+V+D++IIGAGPAG AA+YA R GL+ II+ K GG +A+T +ENY G I G E
Sbjct: 4 EVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGI-NSIPGPE 62
Query: 90 LAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAE 149
LA +MYE V V +I++ I E +++ + KT+IIA G E
Sbjct: 63 LAYKMYEQVLNLNVSIIYEAADEISLKE--------KYKKIKLTTQTLITKTVIIATGTE 114
Query: 150 PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVH 209
R+L++ GE EF +G+SYCA CDGPL+ K V V+G GN+A++EA+YL +I +V L+
Sbjct: 115 NRRLNILGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEAIYLATIAKEVHLIA 174
Query: 210 RRDKFRAD-KILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVF 268
+ +F+A+ +++Q I N E G +E + +++ T E ++ F
Sbjct: 175 NKPQFKAEQQLVQIANNTPNIKIYYNKQTFEFFGHQFLEGLKFRDLITNEVTTLNIEANF 234
Query: 269 IFIGYEPKTDFVKHLGITDEY-GYIKVDMYMRTKVPGIFAAGDITNV-FKQIAVAVGQGA 326
FIG P +L I +E G+I D M+T V GIFAAGDI + +QIA A G
Sbjct: 235 TFIGLLPSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGV 294
Query: 327 IAANSAKEFI 336
IAA AKE+I
Sbjct: 295 IAALYAKEYI 304
>gi|6321898 mitochondrial thioredoxin reductase; Trr2p [Saccharomyces
cerevisiae] >gi|731695|sp|P38816|TRB2_YEAST THIOREDOXIN
REDUCTASE 2, MITOCHONDRIAL PRECURSOR
>gi|630122|pir||S48948 thioredoxin reductase (NADPH) (EC
1.6.4.5) TRR2 - yeast (Saccharomyces cerevisiae)
>gi|529123|gb|AAB68856.1| (U00059) Yhr106wp
[Saccharomyces cerevisiae]
Length = 342
Score = 198 bits (497), Expect = 1e-49
Identities = 123/333 (36%), Positives = 190/333 (56%), Gaps = 22/333 (6%)
Query: 21 GLGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDL 74
G+ KS + V IIG+GPA +TAAIY AR + + + GG + T
Sbjct: 15 GISKSVLSRMIHHKVTIIGSGPAAHTAAIYLARAEMKPTLYEGMMANGIAAGGQLTTTTD 74
Query: 75 IENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANG 134
IEN+PGFPE +SGSEL +RM + K+G ++I + V ++D + F + T
Sbjct: 75 IENFPGFPESLSGSELMERMRKQSAKFGTNIITETVSKVDLSS-------KPFRLWTEFN 127
Query: 135 KEYKGKT---IIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGN 189
++ + T II+A GA +++H+PGE+ + +G+S CA CDG P+F K + V+GGG+
Sbjct: 128 EDAEPVTTDAIILATGASAKRMHLPGEETYWQQGISACAVCDGAVPIFRNKPLAVIGGGD 187
Query: 190 TALQEALYLHSIGVKVTLVHRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVES 248
+A +EA +L KV ++ R+D FRA I+Q R+ K I + NTV E +G K+ +
Sbjct: 188 SACEEAEFLTKYASKVYILVRKDHFRASVIMQRRIEKNPNIIVLFNTVALEAKGDGKLLN 247
Query: 249 VV-LKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIK-VDMYMRTKVPGIF 306
++ +KN K+ + +V+G+F IG+ P TD VK +E GYIK V T VPG F
Sbjct: 248 MLRIKNTKSNVENDLEVNGLFYAIGHSPATDIVKGQVDEEETGYIKTVPGSSLTSVPGFF 307
Query: 307 AAGDITNV-FKQIAVAVGQGAIAANSAKEFIES 338
AAGD+ + ++Q + G G IAA A+ ++ +
Sbjct: 308 AAGDVQDSRYRQAVTSAGSGCIAALDAERYLSA 340
>sp|Q92375|TRXB_SCHPO THIOREDOXIN REDUCTASE >gi|7493475|pir||T40393 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - fission yeast
(Schizosaccharomyces pombe) >gi|1498486|gb|AAC49569.1|
(U63713) thioredoxin reductase [Schizosaccharomyces
pombe] >gi|2924500|emb|CAA17692.1| (AL022019)
thioredoxin reductase [Schizosaccharomyces pombe]
Length = 322
Score = 195 bits (490), Expect = 7e-49
Identities = 118/316 (37%), Positives = 182/316 (57%), Gaps = 18/316 (5%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDLIENYPGFPEGISGS 88
V+IIG+GPAG+TAAIY AR L ++ L GG + T +EN+PGFP+GI+G+
Sbjct: 6 VVIIGSGPAGHTAAIYLARGELKPVMYEGMLANGIAAGGQLTTTTDVENFPGFPDGINGT 65
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKE-YKGKTIIIAVG 147
L + ++G ++I + V ++D + P ++ ++ A +E + ++I+A G
Sbjct: 66 TLTENFRAQSLRFGTEIITETVSKLDLSS-----RPFKYWLEGAEEEEPHTADSVILATG 120
Query: 148 AEPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
A R+LH+ GE + G+S CA CDG P++ K + VVGGG++A +EA +L G KV
Sbjct: 121 ASARRLHITGEDTYWQAGISACAVCDGAVPIYRNKPLAVVGGGDSAAEEAQFLTKYGSKV 180
Query: 206 TLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEKK 263
++ RRDK RA I+ R L + + NTV E +G K + ++ +KN T E + +
Sbjct: 181 YVLVRRDKLRASPIMAKRLLANPKVEVLWNTVAEEAQGDGKLLNNLRIKNTNTNEVSDLQ 240
Query: 264 VDGVFIFIGYEPKTDFVKHLGITDEYGYIK-VDMYMRTKVPGIFAAGDITN-VFKQIAVA 321
V+G+F IG+ P T V DE GYIK ++ RT +PG FAAGD+ + VF+Q +
Sbjct: 241 VNGLFYAIGHIPATKLVAEQIELDEAGYIKTINGTPRTSIPGFFAAGDVQDKVFRQAITS 300
Query: 322 VGQGAIAANSAKEFIE 337
G G AA A ++E
Sbjct: 301 AGSGCQAALLAMHYLE 316
>sp|P75531|TRXB_MYCPN THIOREDOXIN REDUCTASE (TRXR) >gi|2146661|pir||S73917 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Mycoplasma pneumoniae
(strain ATCC 29342) >gi|1674293|gb|AAB96239.1|
(AE000058) thioredoxin reductase [Mycoplasma pneumoniae]
>gi|2231181|gb|AAC45451.1| (U51988) thioredoxin
reductase K04_orf315 [Mycoplasma pneumoniae]
Length = 315
Score = 192 bits (483), Expect = 5e-48
Identities = 117/311 (37%), Positives = 176/311 (55%), Gaps = 16/311 (5%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSEL 90
++DV I+GAGPAG A IY R L+ II GG + T+++ENYPG+ + I+G +L
Sbjct: 15 IYDVAIVGAGPAGIAAGIYGKRANLNLAIIEGSTPGGKVVKTNIVENYPGY-KSITGPDL 73
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
MY H+ + ++++D A + + KT KT+I A G
Sbjct: 74 GLEMYNHLIDLEPTFFYANLIKLDKAADTFI---LYLDDKTV----VFAKTVIYATGMLE 126
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
RKL V E F G+G+SYCA CDG L+ + V VVGGGN+A+QEALYL S+ V L+HR
Sbjct: 127 RKLGVAKEDHFYGKGISYCAICDGSLYKDQVVGVVGGGNSAIQEALYLASMAKTVHLIHR 186
Query: 211 RDKFRADKILQDRLKQAGIPTI---LNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGV 267
R+ FRAD+ ++L+ +P + LN V E+ G N + +VL+N T + ++ V
Sbjct: 187 REGFRADETALNKLR--NLPNVVFHLNYTVKELLGNNTLNGIVLQNTLDHSTKQIDLNCV 244
Query: 268 FIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQG 325
F +IG+E T V+HL + D G++ + M T + G+FAAGD + F+QI A+ G
Sbjct: 245 FPYIGFESITKPVEHLNLKLDPQGFLITNEQMETSLKGLFAAGDCRSKHFRQIGTAINDG 304
Query: 326 AIAANSAKEFI 336
IA + ++ +
Sbjct: 305 IIAVLTIRDVL 315
>pir||B81432 thioredoxin reductase (NADPH) (EC 1.6.4.5) Cj0146c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967640|emb|CAB72630.1| (AL139074) thioredoxin
reductase [Campylobacter jejuni]
Length = 312
Score = 192 bits (483), Expect = 5e-48
Identities = 119/314 (37%), Positives = 172/314 (53%), Gaps = 15/314 (4%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKD--LGGNMAITDLIENYPGFPEGISGSELA 91
DV IIG GPAG +A +YA R GL +++ + GG + + IENYPG + + G
Sbjct: 3 DVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFM 62
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
E ++G+ E+V + E F +K GK K +I+ G+ P+
Sbjct: 63 APWSEQCMRFGLK---HEMVGV---EQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK 116
Query: 152 KLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
K GE EF G+GVS CATCDG + KEV V+GGG+TAL+EALYL +I K+ L+HRR
Sbjct: 117 KAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRR 176
Query: 212 DKFRADKILQDRLKQ-AGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
D+FRA +++K+ I I + V E+ G + V +K G + V G+F F
Sbjct: 177 DEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTF 236
Query: 271 IGYEPKTDFVKH-----LGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQ 324
+G + + +K L +E G + VD+ M+T V G+FAAGD+ + KQ+ A G
Sbjct: 237 VGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGD 296
Query: 325 GAIAANSAKEFIES 338
GA+AA SA +IES
Sbjct: 297 GAVAALSAMAYIES 310
>pir||B71556 probable thioredoxin reductase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3328496|gb|AAC67690.1| (AE001284)
Thioredoxin Reductase [Chlamydia trachomatis]
Length = 351
Score = 191 bits (481), Expect = 8e-48
Identities = 117/319 (36%), Positives = 181/319 (56%), Gaps = 27/319 (8%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIII----TKDLGGNMAITDLIENYPGFPEGISGSEL 90
++IIG+GPAGYTAAIYA+R L ++ + GG + T +EN+PGFPEG+ G +L
Sbjct: 45 LVIIGSGPAGYTAAIYASRALLTPVLFEGFFSGIAGGQLMTTTEVENFPGFPEGVLGHQL 104
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKT---ANGKE-YKGKTIIIAV 146
M +++G V+ ++ +D F V+ +GKE + IIA
Sbjct: 105 MDLMKTQAQRFGTQVLSKDITAVD------------FSVRPFVLKSGKETFTCDACIIAT 152
Query: 147 GAEPRKLHVPG--EKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIG 202
GA ++L +PG + EF +GV+ CA CDG P+F K++ VVGGG++AL+EA++L G
Sbjct: 153 GASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDKDLFVVGGGDSALEEAMFLTRYG 212
Query: 203 VKVTLVHRRDKFRADKILQDRLK-QAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFE 261
+V +VHRRD RA K++ ++ + I + N+ + +I G V S+ + N T
Sbjct: 213 KRVFVVHRRDTLRASKVMVNKAQANEKIFFLWNSEIVKISGDTLVRSIDIYNNVDETTTT 272
Query: 262 KKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQIA 319
+ GVF IG++P T F+ DE GYI + RT VPG+FAAGD+ + ++Q
Sbjct: 273 MEAAGVFFAIGHQPNTAFLGGQVALDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAI 332
Query: 320 VAVGQGAIAANSAKEFIES 338
+ G G +AA A+ F+E+
Sbjct: 333 TSAGSGCMAALDAERFLEN 351
>sp|O84101|TRXB_CHLTR THIOREDOXIN REDUCTASE (TRXR)
Length = 312
Score = 191 bits (481), Expect = 8e-48
Identities = 117/319 (36%), Positives = 181/319 (56%), Gaps = 27/319 (8%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIII----TKDLGGNMAITDLIENYPGFPEGISGSEL 90
++IIG+GPAGYTAAIYA+R L ++ + GG + T +EN+PGFPEG+ G +L
Sbjct: 6 LVIIGSGPAGYTAAIYASRALLTPVLFEGFFSGIAGGQLMTTTEVENFPGFPEGVLGHQL 65
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKT---ANGKE-YKGKTIIIAV 146
M +++G V+ ++ +D F V+ +GKE + IIA
Sbjct: 66 MDLMKTQAQRFGTQVLSKDITAVD------------FSVRPFVLKSGKETFTCDACIIAT 113
Query: 147 GAEPRKLHVPG--EKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIG 202
GA ++L +PG + EF +GV+ CA CDG P+F K++ VVGGG++AL+EA++L G
Sbjct: 114 GASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDKDLFVVGGGDSALEEAMFLTRYG 173
Query: 203 VKVTLVHRRDKFRADKILQDRLK-QAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFE 261
+V +VHRRD RA K++ ++ + I + N+ + +I G V S+ + N T
Sbjct: 174 KRVFVVHRRDTLRASKVMVNKAQANEKIFFLWNSEIVKISGDTLVRSIDIYNNVDETTTT 233
Query: 262 KKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQIA 319
+ GVF IG++P T F+ DE GYI + RT VPG+FAAGD+ + ++Q
Sbjct: 234 MEAAGVFFAIGHQPNTAFLGGQVALDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAI 293
Query: 320 VAVGQGAIAANSAKEFIES 338
+ G G +AA A+ F+E+
Sbjct: 294 TSAGSGCMAALDAERFLEN 312
>sp|P94284|TRXB_BORBU THIOREDOXIN REDUCTASE (TRXR) >gi|7427755|pir||B70164 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Lyme disease spirochete
>gi|2688441|gb|AAC66890.1| (AE001154) thioredoxin
reductase (trxB) [Borrelia burgdorferi]
Length = 326
Score = 191 bits (480), Expect = 1e-47
Identities = 116/308 (37%), Positives = 168/308 (53%), Gaps = 12/308 (3%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAK 92
DVII+G+GPAG TA IY+ I+ + GG + T + NYPGF GISG L
Sbjct: 27 DVIIVGSGPAGLTAGIYSVMSNYKAAILEGPEPGGQLTTTTEVYNYPGFKNGISGRNLML 86
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRK 152
M E V G + V I +Y + T N YK K +IIAVG++P+K
Sbjct: 87 NMREQVVNLGAKTFPETVFSIKRKGNIFY-------LYTEN-YIYKSKAVIIAVGSKPKK 138
Query: 153 LH-VPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
L + F +G+S CA CDG LF GK V V+GGGNTAL E++YL + KV L+ R+
Sbjct: 139 LETLKNSGLFWNKGISVCAICDGHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYLIVRK 198
Query: 212 DKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
+ RA +L+D + K I + N+ E+ G + V SV + N K +E +V VF+
Sbjct: 199 NNLRAIAMLRDSVAKLPNIEILYNSEAIEVDGKSSVSSVKIFNKKDNVVYELEVSAVFMA 258
Query: 271 IGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAIAA 329
+GY+P T+F+K DE G+I ++T V G+F+ GD++N ++ Q A +G IA+
Sbjct: 259 VGYKPNTEFLKGFLDLDEEGFIVTKDVVKTSVDGVFSCGDVSNKLYAQAITAAAEGFIAS 318
Query: 330 NSAKEFIE 337
F++
Sbjct: 319 VELGNFLK 326
>sp|O66790|TRXB_AQUAE THIOREDOXIN REDUCTASE (TRXR) >gi|7427756|pir||B70345 thioredoxin
reductase (NADPH) (EC 1.6.4.5) - Aquifex aeolicus
>gi|2983154|gb|AAC06756.1| (AE000693) thioredoxin
reductase [Aquifex aeolicus]
Length = 323
Score = 191 bits (480), Expect = 1e-47
Identities = 121/310 (39%), Positives = 172/310 (55%), Gaps = 11/310 (3%)
Query: 31 KVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGISGSE 89
KV+DVIIIGAGPAG TAAIY AR G T+++ + + G + +T IENYPG P +SG E
Sbjct: 11 KVYDVIIIGAGPAGTTAAIYTARAGWKTLVLYRAEADGALGVTQKIENYPGVPGPLSGYE 70
Query: 90 LAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAE 149
L K M E K +G + + +V+ D +V T +G+E++GKTII+A GA
Sbjct: 71 LLKIMREQAKSFGAEFVRGKVIATDLNSDPK-------KVYTIDGREFRGKTIIVASGAM 123
Query: 150 PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVH 209
R GE+EF GRGVSYC CD F + V V+G + A++EA ++ KV V
Sbjct: 124 ERANKFKGEEEFLGRGVSYCGVCDAAFFKDQPVAVIGDDDYAIEEAEFIARFANKVFFVV 183
Query: 210 RRDKFRA-DKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVF 268
K +A ++++ K + +L EI G V+ + LK+++ E +V+GVF
Sbjct: 184 PGSKIKAPPEVIEHFEKLPNVEILLRHRPIEIVGDQVVKGIKLKDLEKKEEKLLEVNGVF 243
Query: 269 IFI-GYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDI-TNVFKQIAVAVGQGA 326
IF+ G +P DF+ E I V+ M T VPG+FAAGD+ N KQ VA G
Sbjct: 244 IFLGGTKPSVDFLMGQVEMTEGDCIVVNEEMMTSVPGVFAAGDVLCNEVKQAVVAAAMGC 303
Query: 327 IAANSAKEFI 336
AA + +F+
Sbjct: 304 KAALAVDKFL 313
>gb|AAG19616.1| (AE005050) thioredoxin; TrxB2 [Halobacterium sp. NRC-1]
Length = 362
Score = 191 bits (480), Expect = 1e-47
Identities = 118/329 (35%), Positives = 172/329 (51%), Gaps = 32/329 (9%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELAKR 93
++I+G+G A +AA YAAR D ++ D GG + +T +ENYPGFPEGI+G+EL +
Sbjct: 24 LVIVGSGIAALSAATYAARSNNDPLLFEGDEPGGQLTLTSEVENYPGFPEGIAGAELIQE 83
Query: 94 MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKL 153
M ++G +V V +D + F + NG Y +I+A GA R L
Sbjct: 84 MKTQATRFGAEVEHGIVESVD-------DSGRPFRLTLTNGDVYTADAVIVASGASARTL 136
Query: 154 HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK 213
+PGE E G+GVS CATCDG F G+++IVVGGG+ A +EA +L V LVHRRD+
Sbjct: 137 GIPGEDELMGQGVSTCATCDGAFFRGEDMIVVGGGDAAAEEASFLTKFADTVYLVHRRDE 196
Query: 214 FRADKILQDRLKQ----AGIPTILNTVVTEIRGTNK--VESVVLKNVKTG---------- 257
RA+ DR+++ I + NT E+ G+ + V L G
Sbjct: 197 LRAEDYWADRIREHVADGDIEVLWNTEAVEVHGSPEEGVTGASLVRHPEGHPTAKLDADE 256
Query: 258 -ETFEKKVDGVFIFIGYEPKTDFVKHLGIT-DEYGYIKV-----DMYMRTKVPGIFAAGD 310
E E + FI IG+ P T F+ G+ D+ GY++ +T V G+F AGD
Sbjct: 257 TEQLELDIGAFFIAIGHTPNTSFLADTGVVCDDAGYVQTVGGAGGGQTKTDVTGVFGAGD 316
Query: 311 ITNV-FKQIAVAVGQGAIAANSAKEFIES 338
+ + ++Q A G G+ AA A E++ES
Sbjct: 317 VVDYHYQQAVTAAGMGSKAAIDADEYLES 345
>pdb|1VDC| Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 190 bits (479), Expect = 1e-47
Identities = 123/328 (37%), Positives = 185/328 (55%), Gaps = 29/328 (8%)
Query: 37 IIGAGPAGYTAAIYAARFGLDTII----ITKDL--GGNMAITDLIENYPGFPEGISGSEL 90
I+G+GPA +TAAIYAAR L ++ + D+ GG + T +EN+PGFPEGI G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVEL 72
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
+ + +++G + + V ++D + P F++ T + K +I+A+GA
Sbjct: 73 TDKFRKQSERFGTTIFTETVTKVD-----FSSKP--FKLFT-DSKAILADAVILAIGAVA 124
Query: 151 RKLHVPGEKEFTG----RGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
++L G E G RG+S CA CDG P+F K + V+GGG++A++EA +L G K
Sbjct: 125 KRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSK 184
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK---VESVVLKNVKTGETF 260
V ++HRRD FRA KI+Q R L I I N+ V E G + + + +KNV TG+
Sbjct: 185 VYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVS 244
Query: 261 EKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQI 318
+ KV G+F IG+EP T F+ D GY+ +T VPG+FAAGD+ + ++Q
Sbjct: 245 DLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQA 304
Query: 319 AVAVGQGAIAANSAKEFIE---SWNGKS 343
A G G +AA A+ +++ S GKS
Sbjct: 305 ITAAGTGCMAALDAEHYLQEIGSQEGKS 332
>pir||T41743 thioredoxin reductase (NADPH) (EC 1.6.4.5) 2 - Arabidopsis thaliana
>gi|5830788|emb|CAB54874.1| (AL117188) thioredoxin
reductase (NADPH) 2 [Arabidopsis thaliana]
>gi|7270497|emb|CAB80262.1| (AL161587) thioredoxin
reductase (NADPH) 2 [Arabidopsis thaliana]
Length = 333
Score = 190 bits (477), Expect = 2e-47
Identities = 123/328 (37%), Positives = 185/328 (55%), Gaps = 29/328 (8%)
Query: 37 IIGAGPAGYTAAIYAARFGLDTII----ITKDL--GGNMAITDLIENYPGFPEGISGSEL 90
I+G+GPA +TAAIYAAR L ++ + D+ GG + T +EN+PGFPEGI G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVEL 72
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
+ + +++G + + V ++D + P F++ T + K +I+A GA
Sbjct: 73 TDKFRKQSERFGTTIFTETVTKVD-----FSSKP--FKLFT-DSKAILADAVILATGAVA 124
Query: 151 RKLHVPGEKEFTG----RGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
++L G E +G RG+S CA CDG P+F K + V+GGG++A++EA +L G K
Sbjct: 125 KRLSFVGSGEASGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSK 184
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK---VESVVLKNVKTGETF 260
V ++HRRD FRA KI+Q R L I I N+ V E G + + + +KNV TG+
Sbjct: 185 VYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVS 244
Query: 261 EKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQI 318
+ KV G+F IG+EP T F+ D GY+ +T VPG+FAAGD+ + ++Q
Sbjct: 245 DLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQA 304
Query: 319 AVAVGQGAIAANSAKEFIE---SWNGKS 343
A G G +AA A+ +++ S GKS
Sbjct: 305 ITAAGTGCMAALDAEHYLQEIGSQQGKS 332
>gb|AAB86519.1| (AC002329) putative thioredoxin reductase [Arabidopsis thaliana]
Length = 383
Score = 187 bits (471), Expect = 1e-46
Identities = 120/330 (36%), Positives = 187/330 (56%), Gaps = 29/330 (8%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTII----ITKDL--GGNMAITDLIENYPGFPEGISGS 88
V I+G+GPA +TAAIYA+R L ++ + D+ GG + T +EN+PGFPEGI G
Sbjct: 61 VCIVGSGPAAHTAAIYASRAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGI 120
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
++ ++ + +++G + + V ++D + P F++ T + + ++II+ GA
Sbjct: 121 DIVEKFRKQSERFGTTIFTETVNKVD-----FSSKP--FKLFT-DSRTVLADSVIISTGA 172
Query: 149 EPRKLHVPGEKE----FTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIG 202
++L G E F RG+S CA CDG P+F K ++V+GGG++A++EA +L G
Sbjct: 173 VAKRLSFTGSGEGNGGFWNRGISACAVCDGAAPIFRNKPLVVIGGGDSAMEEANFLTKYG 232
Query: 203 VKVTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK---VESVVLKNVKTGE 258
KV ++HRRD FRA KI+Q R L I I N+ V E G + + +KNV TG+
Sbjct: 233 SKVYIIHRRDTFRASKIMQQRALSNPKIEVIWNSAVVEAYGDENGRVLGGLKVKNVVTGD 292
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFK 316
+ KV G+F IG+EP T F+ DE GY+ +T V G+FAAGD+ + ++
Sbjct: 293 VSDLKVSGLFFAIGHEPATKFLDGQLELDEDGYVVTKPGTTKTSVVGVFAAGDVQDKKYR 352
Query: 317 QIAVAVGQGAIAANSAKEFIE---SWNGKS 343
Q A G G +AA A+ +++ S GKS
Sbjct: 353 QAITAAGTGCMAALDAEHYLQEIGSQEGKS 382
>gb|AAB41020.1| (U82978) thioredoxin reductase [Borrelia burgdorferi]
Length = 320
Score = 186 bits (468), Expect = 3e-46
Identities = 113/298 (37%), Positives = 162/298 (53%), Gaps = 12/298 (4%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIIT-KDLGGNMAITDLIENYPGFPEGISGSELAK 92
DVII+G+GPAG TA IY+ I+ + GG + T + NYPGF GISG L
Sbjct: 27 DVIIVGSGPAGLTAGIYSVMSNYKAAILEGPEPGGQLTTTTEVYNYPGFKNGISGRNLML 86
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRK 152
M E V G + V I +Y + T N YK K +IIAVG++P+K
Sbjct: 87 NMREQVVNLGAKTFPETVFSIKRKGNIFY-------LYTEN-YIYKSKAVIIAVGSKPKK 138
Query: 153 LH-VPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRR 211
L + F +G+S CA CDG LF GK V V+GGGNTAL E++YL + KV L+ R+
Sbjct: 139 LETLKNSGLFWNKGISVCAICDGHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYLIVRK 198
Query: 212 DKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
+ RA +L+D + K I + N+ E+ G + V SV + N K +E +V VF+
Sbjct: 199 NNLRAIAMLRDSVAKLPNIEILYNSEAIEVDGKSSVSSVKIFNKKDNVVYELEVSAVFMA 258
Query: 271 IGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFKQIAVAVGQGAI 327
+GY+P T+F+K DE G+I ++T V G+F+ GD++N + Q A +G +
Sbjct: 259 VGYKPNTEFLKGFLDLDEEGFIVTKDVVKTSVDGVFSCGDVSNKPYAQAITAAAEGLL 316
>pir||C81710 thioredoxin reductase frameshift TC0375 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190415|gb|AAF39233.1|
(AE002304) thioredoxin reductase [Chlamydia muridarum]
Length = 312
Score = 186 bits (467), Expect = 4e-46
Identities = 113/312 (36%), Positives = 176/312 (56%), Gaps = 19/312 (6%)
Query: 37 IIGAGPAGYTAAIYAARFGLDTIII----TKDLGGNMAITDLIENYPGFPEGISGSELAK 92
IIG+GPAGYTAAIYA+R L I+ + GG + T +EN+PGFP+G+ G +L +
Sbjct: 8 IIGSGPAGYTAAIYASRALLTPILFEGFFSGIAGGQLMTTTEVENFPGFPQGVLGHQLME 67
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRK 152
M +++G VI ++ +D + + V + + IIA GA ++
Sbjct: 68 NMKMQAQRFGTQVIAKDITSVDFSVRPF--------VLKSGEDTFTCDACIIATGASAKR 119
Query: 153 LHVPG--EKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLV 208
L +PG + EF +GV+ CA CDG P+F +++ V+GGG++AL+EA++L G +V +V
Sbjct: 120 LSIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGDSALEEAMFLTRYGKRVFVV 179
Query: 209 HRRDKFRADKILQDRLK-QAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGV 267
HRRD RA K + ++ + I + N+ V +I G + V S+ + N T + GV
Sbjct: 180 HRRDTLRASKAMVNKAQANEKIVFLWNSEVVKILGDSLVRSIDIFNNVEKTTVTMEAAGV 239
Query: 268 FIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQIAVAVGQG 325
F IG++P T F+ DE GYI + RT VPG+FAAGD+ + ++Q + G G
Sbjct: 240 FFAIGHQPNTAFLGGQLSLDENGYIITEKGSSRTSVPGVFAAGDVQDKYYRQAITSAGSG 299
Query: 326 AIAANSAKEFIE 337
+AA A+ F+E
Sbjct: 300 CMAALDAERFLE 311
>pir||S44027 thioredoxin reductase (NADPH) (EC 1.6.4.5) 2 [validated] -
Arabidopsis thaliana
Length = 333
Score = 185 bits (465), Expect = 6e-46
Identities = 122/328 (37%), Positives = 183/328 (55%), Gaps = 29/328 (8%)
Query: 37 IIGAGPAGYTAAIYAARFGLDTII----ITKDL--GGNMAITDLIENYPGFPEGISGSEL 90
I+G+GPA +TAAIYAAR L ++ + D+ GG + T +EN+PGFPEGI G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVEL 72
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
+ + +++G + + V ++D + P F++ T + K +I+A+GA
Sbjct: 73 TDKFRKQSERFGTTIFTETVTKVD-----FSSKP--FKLFT-DSKAILADAVILAIGAVA 124
Query: 151 RKLHVPGEKEFTG----RGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
+ L G E G RG+S CA CDG P+F K + V+GGG++A++EA +L G K
Sbjct: 125 KWLSFVGSGEVLGGLWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSK 184
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK---VESVVLKNVKTGETF 260
V ++ RRD FRA KI+Q R L I I N+ V E G + + + +KNV TG+
Sbjct: 185 VYIIDRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVS 244
Query: 261 EKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQI 318
+ KV G+F IG+EP T F+ D GY+ +T VPG+FAAGD+ + ++Q
Sbjct: 245 DLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQA 304
Query: 319 AVAVGQGAIAANSAKEFIE---SWNGKS 343
A G G +AA A+ +++ S GKS
Sbjct: 305 ITAAGTGCMAALDAEHYLQEIGSQQGKS 332
>sp|Q39243|TRB1_ARATH THIOREDOXIN REDUCTASE 1 (NADPH-DEPENDENT THIOREDOXIN REDUCTASE 1)
(NTR 1) >gi|468526|emb|CAA80656.1| (Z23109) Thioredoxin
reductase [Arabidopsis thaliana]
Length = 332
Score = 178 bits (447), Expect = 8e-44
Identities = 119/327 (36%), Positives = 180/327 (54%), Gaps = 28/327 (8%)
Query: 37 IIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLI-----ENYPGFPEGISGSELA 91
I+G+GPA +TAAIYAAR L ++ + ++A + EN+PGFPEGI G EL
Sbjct: 13 IVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLNQPPRENFPGFPEGILGVELT 72
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPR 151
+ + +++G + + V ++D + P F++ T + K +I+A+GA +
Sbjct: 73 DKFRKQSERFGTTIFTETVTKVD-----FSSKP--FKLFT-DSKAILADAVILAIGAVAK 124
Query: 152 KLHVPGEKEFTG----RGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
L G E G RG+S CA CDG P+F K + V+GGG++A++EA +L G KV
Sbjct: 125 WLSFVGSGEVLGGLWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKV 184
Query: 206 TLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNK---VESVVLKNVKTGETFE 261
++ RRD FRA KI+Q R L I I N+ V E G + + + +KNV TG+ +
Sbjct: 185 YIIDRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSD 244
Query: 262 KKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDM-YMRTKVPGIFAAGDITN-VFKQIA 319
KV G+F IG+EP T F+ D GY+ +T VPG+FAAGD+ + ++Q
Sbjct: 245 LKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAI 304
Query: 320 VAVGQGAIAANSAKEFIE---SWNGKS 343
A G G +AA A+ +++ S GKS
Sbjct: 305 TAAGTGCMAALDAEHYLQEIGSQQGKS 331
>gb|AAA64747.1| (U10274) thioredoxin reductase [Saccharomyces cerevisiae]
Length = 319
Score = 177 bits (444), Expect = 2e-43
Identities = 111/316 (35%), Positives = 171/316 (53%), Gaps = 16/316 (5%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDLIENYPGFPEGISGS 88
V IIG+GPA +T AIY AR + I+ + GG + T IEN+PGFP+G++GS
Sbjct: 6 VTIIGSGPAAHTVAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 65
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
EL RM E K+G ++I + V ++D + + + + + II+A GA
Sbjct: 66 ELMDRMREQSTKFGTEIITETVSKVDLSSKPFK----LWAEFNEDAEPVATDAIILATGA 121
Query: 149 EPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVKVT 206
+++H+PGE+ + +G+S CA CDG P+F K + V+GGG++A +EA +L G K
Sbjct: 122 SAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKCL 181
Query: 207 LVHRRDKFRADKILQDRL-KQAGIPTILNTVVTEIRGTNK-VESVVLKNVKTGETFEKKV 264
+ + + + R K I + NTV E +G K + ++ +KN K E + V
Sbjct: 182 CLSEKTICVLLPLCKKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPV 241
Query: 265 DGVFIFIGYEPKTDFVKHLGITDEYGYIK-VDMYMRTKVPGIFAAGDI-TNVFKQIAVAV 322
G+F IG+ P T V TDE GYIK V T VPG FAAGD+ + ++Q +
Sbjct: 242 SGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSA 301
Query: 323 GQGAIAANSAKEFIES 338
G G +AA A++++ S
Sbjct: 302 GSGCMAALDAEKYLTS 317
>sp|P43496|TRXB_PENCH THIOREDOXIN REDUCTASE >gi|1078637|pir||B49888 thioredoxin reductase
(NADPH) (EC 1.6.4.5) - Penicillium chrysogenum
>gi|4379348|emb|CAA53725.1| (X76119) thioredoxin
reductase [Penicillium chrysogenum]
Length = 334
Score = 175 bits (439), Expect = 7e-43
Identities = 109/319 (34%), Positives = 172/319 (53%), Gaps = 20/319 (6%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDLIENYPGFPEGISGS 88
V+IIG+G +TAAIY +R L ++ L GG + T +EN+PGFP GI G+
Sbjct: 6 VVIIGSGAGAHTAAIYLSRAELQPVLYEGMLANGTAAGGQLTTTTDVENFPGFPSGIGGA 65
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKE--YKGKTIIIAV 146
EL M +++G ++I + + ++D + + E G E +IIA
Sbjct: 66 ELMDNMRAQSERFGTEIITETISKLDLSSRPF---KMWTEWNDDEGSEPVRTADAVIIAT 122
Query: 147 GAEPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
GA R+L++PGE+ + G+S CA CDG P+F K + V+GGG++A +EA++L G
Sbjct: 123 GANARRLNLPGEETYWQNGISACAVCDGAVPIFRNKPLYVIGGGDSAAEEAMFLAKYGSS 182
Query: 205 VTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGTNKVESVV----LKNVKTGET 259
VT++ R+DK RA I+ DR L NTV TE+ G NK ++ +K+V +
Sbjct: 183 VTVLVRKDKLRASNIMADRLLAHPKCKVRFNTVATEVIGENKPNGLMTHLRVKDVLSNAE 242
Query: 260 FEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMR-TKVPGIFAAGDITNV-FKQ 317
+ +G+F +G++P + VK D+ GYI T V G+FA GD+ + ++Q
Sbjct: 243 EVVEANGLFYAVGHDPASGLVKGQVELDDEGYIITKPGTSFTNVEGVFACGDVQDKRYRQ 302
Query: 318 IAVAVGQGAIAANSAKEFI 336
+ G G +AA A++FI
Sbjct: 303 AITSAGSGCVAALEAEKFI 321
>sp|Q39242|TRB2_ARATH THIOREDOXIN REDUCTASE 2 (NADPH-DEPENDENT THIOREDOXIN REDUCTASE 2)
(NTR 2) >gi|1076358|pir||S44026 thioredoxin reductase
(NADPH) (EC 1.6.4.5) 2 - Arabidopsis thaliana (fragment)
>gi|468524|emb|CAA80655.1| (Z23108) NADPH thioredoxin
reductase [Arabidopsis thaliana]
Length = 302
Score = 166 bits (415), Expect = 5e-40
Identities = 104/293 (35%), Positives = 164/293 (55%), Gaps = 23/293 (7%)
Query: 66 GGNMAITDLIENYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPC 125
GG + T +EN+PGFPEGI G ++ ++ + +++G + + V ++D + P
Sbjct: 17 GGQLTTTTDVENFPGFPEGILGIDIVEKFRKQSERFGTTIFTETVNKVD-----FSSKP- 70
Query: 126 QFEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKE----FTGRGVSYCATCDG--PLFVG 179
F++ T + + ++II+ GA ++L G E F RG+S CA CDG P+F
Sbjct: 71 -FKLFT-DSRTVLADSVIISTGAVAKRLSFTGSGEGNGGFWNRGISACAVCDGAAPIFRN 128
Query: 180 KEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVT 238
K ++V+GGG++A++EA +L G KV ++HRRD FRA KI+Q R L I I N+ V
Sbjct: 129 KPLVVIGGGDSAMEEANFLTKYGSKVYIIHRRDTFRASKIMQQRALSNPKIEVIWNSAVV 188
Query: 239 EIRGTNK---VESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVD 295
E G + + +KNV TG+ + KV G+F IG++P T F+ DE GY+
Sbjct: 189 EAYGDENGRVLGGLKVKNVVTGDVSDLKVSGLFFAIGHQPATKFLDGQLELDEDGYVVTK 248
Query: 296 M-YMRTKVPGIFAAGDITN-VFKQIAVAVGQGAIAANSAKEFIE---SWNGKS 343
+T V G+FAAGD+ + ++Q A G G +AA A+ +++ S GKS
Sbjct: 249 PGTTKTSVVGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQEGKS 301
>emb|CAA56112.1| (X79603) disulphide oxidoreductase [Entamoeba histolytica]
>gi|1098299|prf||2115369A disulfide oxidoreductase-like
protein [Entamoeba histolytica]
Length = 316
Score = 148 bits (371), Expect = 7e-35
Identities = 106/322 (32%), Positives = 166/322 (50%), Gaps = 21/322 (6%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL------GGNMAITDLIENY--PGF 81
S + DV+IIG+GPA +TAAIY R L ++ + GG + T +IEN+
Sbjct: 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFRISRI 61
Query: 82 PEGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKT 141
I G+EL M + E++ + F++ T GKE K+
Sbjct: 62 SNWIDGNELMMNMRTQSRSM-------ELLSLQKLLTMLNFSTQPFKLFTEEGKEVLTKS 114
Query: 142 IIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDG--PLFVGKEVIVVGGGNTALQEALYLH 199
+IIA A ++ + GVS CA CDG P+F K ++V GGG+ A++EAL+L
Sbjct: 115 VIIASNATAKEACSRRRQILAKIGVSACAICDGAVPIFRNKVLMVEGGGDAAMEEALHLT 174
Query: 200 SIGVKVTLVHRRDKFRADKILQDR-LKQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTG 257
G KV ++HRRD FRA K +Q+R L I I N+ + E+ G + + + N+ +G
Sbjct: 175 KYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSG 234
Query: 258 ETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITN-VFK 316
E V G+F IG+ + F+ T + GYI + +T V G+FA GD+ + V++
Sbjct: 235 EYKVVPVAGLFYAIGHSQNSKFLGGQVKTADDGYILTE-GPKTSVDGVFACGDVCDRVYR 293
Query: 317 QIAVAVGQGAIAANSAKEFIES 338
Q VA G G +AA S ++++++
Sbjct: 294 QAIVAAGSGCMAALSCEKWLQT 315
>emb|CAB93736.1| (AL357613) putative thioredoxin reductase. [Streptomyces coelicolor
A3(2)]
Length = 558
Score = 148 bits (370), Expect = 9e-35
Identities = 101/342 (29%), Positives = 164/342 (47%), Gaps = 33/342 (9%)
Query: 22 LGKSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKD-LGGNMAITDLIENYPG 80
+G + S +D+++IG GPAG AA+Y A GL T+++ + GG + IENY G
Sbjct: 222 VGLATTPTSDFYDLVVIGGGPAGLGAAVYGASEGLRTVLVERSATGGQAGQSSRIENYLG 281
Query: 81 FPEGISGSELAKRMYEHVKKYGVDVI-FDEVVRIDPAECAYYEGPCQFEVKTANGKEYKG 139
FP+G+SG +L +R ++G +++ EV ++ A V+ ++G
Sbjct: 282 FPDGVSGGQLTERARRQAARFGAEILTAREVTGLEANGAARV-------VRFSDGSAIAA 334
Query: 140 KTIIIAVGAEPRKLHVPGEKEFTGRGVSY-CATCDGPLFVGKEVIVVGGGNTALQEALYL 198
++I+A G R+L PG ++ G GV Y A + G +V +VGG N+A Q A+YL
Sbjct: 335 HSVILATGVSYRQLTAPGTEDLAGCGVFYGSALTEAASCQGHDVYIVGGANSAGQAAMYL 394
Query: 199 HSIGVKVTLVHRRDKFRADK---ILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVK 255
VTL+ R A ++Q + I T+V G +E + L++
Sbjct: 395 ARGAKSVTLLVRGGSLEASMSYYLIQQIEETPNIRVRCGTLVEGAHGDGHLERLTLRDAA 454
Query: 256 TGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYI-------------------KVDM 296
+G T +F+FIG P TD++ + DE G+I +
Sbjct: 455 SGATELVDAQWLFVFIGAAPLTDWLDGTVLRDERGFILAGPDLTPDGRPPAGWELDRPPY 514
Query: 297 YMRTKVPGIFAAGDI-TNVFKQIAVAVGQGAIAANSAKEFIE 337
++ T VPG+F AGD K++A AVG+GA+A ++E
Sbjct: 515 HLETSVPGVFVAGDARAESAKRVASAVGEGAMAVMLVHRYLE 556
>dbj|BAB07127.1| (AP001518) thioredoxin reductase [Bacillus halodurans]
Length = 330
Score = 138 bits (345), Expect = 7e-32
Identities = 99/321 (30%), Positives = 155/321 (47%), Gaps = 20/321 (6%)
Query: 29 ESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAIT---DLIENYPGFPE 83
+ +++D+ IIG GP G AA Y II LGG +A I + GFP+
Sbjct: 4 KEELYDITIIGGGPTGLFAAFYGGMRQAKVKIIESMPQLGGQLAALYPEKYIYDVAGFPK 63
Query: 84 GISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTII 143
+ +L + +++ + ++ V + E F +KT Y K II
Sbjct: 64 -VKAQDLVNDLKRQAEQFNPTIALEQSV-----QNVTKETDDTFTIKTDKETHYS-KAII 116
Query: 144 IAVGA---EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
I GA +PR+L V G K++ G+ + Y D + GK V++ GGG++A+ AL L
Sbjct: 117 ITAGAGAFQPRRLEVEGAKQYEGKNLQYFVN-DLNAYAGKNVLISGGGDSAVDWALMLEP 175
Query: 201 IGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGET 259
+ VTL+HRRDKFRA + + L+++ + + ++E+ G K+ V ++ VK
Sbjct: 176 VAKNVTLIHRRDKFRAHEHSVELLQKSSVNILTPFAISELSGDGEKIHHVTIQEVKGDAV 235
Query: 260 FEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV---FK 316
VD V + G+ +K G+ E I V+ M T +PGI+AAGDI K
Sbjct: 236 ETLDVDEVIVNFGFVSSLGPIKGWGLEIEKNSIVVNTKMETNIPGIYAAGDICTYPGKVK 295
Query: 317 QIAVAVGQGAIAANSAKEFIE 337
IA G+ A N+AK FI+
Sbjct: 296 LIATGFGEAPTAVNNAKAFID 316
>gi|10803602 trxB [Halobacterium sp. NRC-1] >gi|10803701|ref|NP_046099.1| trxB
[Halobacterium sp. NRC-1] >gi|7484108|pir||T08272
probable thioredoxin reductase (NADPH) (EC 1.6.4.5) -
Halobacterium sp. (strain NRC-1) plasmid pNRC100
>gi|2822333|gb|AAC82839.1| (AF016485) trxB
[Halobacterium sp. NRC-1] >gi|2822432|gb|AAC82938.1|
(AF016485) trxB [Halobacterium sp. NRC-1]
>gi|10584132|gb|AAG20761.1| (AE005144) thioredoxin
reductase; TrxB1_1 [Halobacterium sp. NRC-1]
>gi|10584470|gb|AAG21047.1| (AE005170) thioredoxin
reductase; TrxB1_2 [Halobacterium sp. NRC-1]
Length = 205
Score = 138 bits (344), Expect = 1e-31
Identities = 73/193 (37%), Positives = 115/193 (58%), Gaps = 8/193 (4%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELAK 92
D++I G+G AG +AA+YAAR L+ +++ D GG + +T +ENY GFP+G+ G +L +
Sbjct: 7 DLVIAGSGIAGLSAAVYAARADLEPLVLEGDEPGGQLTLTTDVENYLGFPDGVGGMDLVQ 66
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRK 152
R E +++G + E A +G E+ + G +++I+A GA R
Sbjct: 67 RGKEQAEQFGAQFEHGRI------EAADLDGQ-PLELSLSTGDTLYTRSLIVATGASARW 119
Query: 153 LHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRD 212
+ E E G G+S CATCDG G +V+VVGGG++A++EAL+L VT+VHRR+
Sbjct: 120 VGAENEDELMGAGLSTCATCDGAFHRGDDVLVVGGGDSAMEEALFLAKFADSVTVVHRRE 179
Query: 213 KFRADKILQDRLK 225
+ RA +I+ DR +
Sbjct: 180 ELRASEIMADRAR 192
>gb|AAK42391.1| Thioredoxin reductase (trxB-1) [Sulfolobus solfataricus]
Length = 332
Score = 136 bits (339), Expect = 4e-31
Identities = 107/324 (33%), Positives = 162/324 (49%), Gaps = 33/324 (10%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYP-------GFPE 83
+D+++IG GP G YA + T++I +LGG L+ YP G
Sbjct: 4 YDIVVIGGGPVGLFGTFYAGLRDMKTLLIDAQDELGGQ-----LVSLYPEKIVYDVGGLA 58
Query: 84 GISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTII 143
GI ELA+R+ E K +G D+ +E+ A+ + VKT YK KTI
Sbjct: 59 GIQAYELAQRLIEQAKMFGPDIKVNEL-----ADMIEKTNDNMWIVKTDKAT-YKTKTIF 112
Query: 144 IAVGAE---PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
IA G P +L GE E+ RGV Y F GK V++VGGG++A+ AL L
Sbjct: 113 IAAGIGKIVPSRLGAKGEIEYENRGVYYTVRRKKD-FEGKRVLIVGGGDSAVDWALTLAP 171
Query: 201 IGVKVTLVHRRDKFRA-DKILQDRLKQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGE 258
+ VTL+HRRD+FRA ++ +++ + A + + + E++G NKV ++ + +T E
Sbjct: 172 VAKSVTLIHRRDQFRAHERSVKELFRVANV--YVWHELKEVKGDGNKVTQAIIFDNRTKE 229
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV---- 314
VD V I IGY+ + G+T + I V+ M T +PG++A GDI +
Sbjct: 230 EKVLDVDSVIISIGYKGDLGNIPKWGVTMKGRDIVVNGRMETNLPGVYAGGDIVQMEGSP 289
Query: 315 -FKQIAVAVGQGAIAANSAKEFIE 337
IAV AIA + AK+++E
Sbjct: 290 KLALIAVGFAHAAIAISVAKKYVE 313
>emb|CAB57297.1| (AJ243598) NADH oxidase [Sulfolobus solfataricus]
Length = 332
Score = 134 bits (333), Expect = 2e-30
Identities = 106/324 (32%), Positives = 161/324 (48%), Gaps = 33/324 (10%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYP-------GFPE 83
+D+++IG GP G YA + T++I +LGG L+ YP G
Sbjct: 4 YDIVVIGGGPVGLFGTFYAGLRDMKTLLIDAQDELGGQ-----LVSLYPEKIVYDVGGLA 58
Query: 84 GISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTII 143
GI ELA+R+ E K +G D+ +E+ A+ + VKT YK KTI
Sbjct: 59 GIQAYELAQRLIEQAKMFGPDIKVNEL-----ADMIEKTNDNMWIVKTDKAT-YKTKTIF 112
Query: 144 IAVGAE---PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
IA G P +L GE E+ RGV Y F GK V++VGGG++A+ AL L
Sbjct: 113 IAAGIGKIVPSRLGAKGEIEYENRGVYYTVRRKKD-FEGKRVLIVGGGDSAVDWALTLAP 171
Query: 201 IGVKVTLVHRRDKFRA-DKILQDRLKQAGIPTILNTVVTEIRGT-NKVESVVLKNVKTGE 258
+ VTL+HRRD+ RA ++ +++ + A + + + E++G NKV ++ + +T E
Sbjct: 172 VAKSVTLIHRRDQLRAHERSVKELFRVANV--YVWHELKEVKGDGNKVTQAIIFDNRTKE 229
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV---- 314
VD V I IGY+ + G+T + I V+ M T +PG++A GDI +
Sbjct: 230 EKVLDVDSVIISIGYKGDLGNIPKWGVTMKGRDIVVNGRMETNLPGVYAGGDIVQMEGSP 289
Query: 315 -FKQIAVAVGQGAIAANSAKEFIE 337
IAV AIA + AK+++E
Sbjct: 290 KLALIAVGFAHAAIAISVAKKYVE 313
>pir||B70015 thioredoxin reductase homolog yumC - Bacillus subtilis
>gi|1934830|emb|CAB07954.1| (Z93939) thioredoxine
reductase [Bacillus subtilis]
>gi|2635708|emb|CAB15201.1| (Z99120) similar to
thioredoxin reductase [Bacillus subtilis]
Length = 332
Score = 125 bits (310), Expect = 9e-28
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 17/320 (5%)
Query: 28 DESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAIT---DLIENYPGFP 82
+++KV+D+ IIG GP G A Y II LGG ++ I + GFP
Sbjct: 3 EDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFP 62
Query: 83 EGISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFE-VKTANGKEYKGKT 141
+ I EL + E + K+ + ++ V E + F+ V+ K
Sbjct: 63 K-IRAQELINNLKEQMAKFDQTICLEQAV-----ESVEKQADGVFKLVQMKKPTTLKRSC 116
Query: 142 IIIAVGA-EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
I GA +PRKL + +++ G+ + Y D F G+ V ++GGG++A+ AL L
Sbjct: 117 ITAGNGAFKPRKLELENAEQYEGKNLHYFVD-DLQKFAGRRVAILGGGDSAVDWALMLEP 175
Query: 201 IGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETF 260
I +V+++HRRDKFRA + + L + + + V E+ G +K+E +VL+ VK
Sbjct: 176 IAKEVSIIHRRDKFRAHEHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKE 235
Query: 261 EKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNV---FKQ 317
++D + + G+ +K+ G+ E I V M T + G FAAGDI
Sbjct: 236 ILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGKVNL 295
Query: 318 IAVAVGQGAIAANSAKEFIE 337
IA G+ A N+AK +++
Sbjct: 296 IASGFGEAPTAVNNAKAYMD 315
>pir||G69759 thioredoxin reductase homolog ycgT - Bacillus subtilis
>gi|2632613|emb|CAB12121.1| (Z99105) similar to
thioredoxin reductase [Bacillus subtilis]
Length = 336
Score = 121 bits (301), Expect = 1e-26
Identities = 88/326 (26%), Positives = 161/326 (48%), Gaps = 27/326 (8%)
Query: 28 DESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIIT--KDLGGNMAI---TDLIENYPGFP 82
+ +V+DV IIG GP G A Y L T +I LGG +++ +I + G P
Sbjct: 3 ENQEVYDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPEKIIRDIGGIP 62
Query: 83 EGISGSELAKRMYEHVKKYGVDVIFDEVV----RIDPAECAYYEGPCQFEVKTANGKEYK 138
GI+G +L +++ E + D++ ++ V R+D + + GK++
Sbjct: 63 -GIAGKQLIEQLKEQAATFDPDIVLNQRVTGFERLDDGTIV---------LTGSEGKKHY 112
Query: 139 GKTIIIAVGA---EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEA 195
+T+I+A G E + + G+ + Y F GK V++ GGG+TA+ A
Sbjct: 113 TRTVILACGMGTLEVNEFDSEDAARYAGKNLHYGVE-KLDAFKGKRVVISGGGDTAVDWA 171
Query: 196 LYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNK-VESVVLKNV 254
L I VT+VHRR++F + ++KQ+ + + + ++ G + ++SV + +
Sbjct: 172 NELEPIAASVTVVHRREEFGGMESSVTKMKQSSVRVLTPYRLEQLNGDEEGIKSVTVCHT 231
Query: 255 KTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDIT-- 312
++G+ + ++D + I G++ + G+ E G +K D +MRT +PG+F AGD
Sbjct: 232 ESGQRKDIEIDELIINHGFKIDLGPMMEWGLEIEEGRVKADRHMRTNLPGVFVAGDAAFY 291
Query: 313 -NVFKQIAVAVGQGAIAANSAKEFIE 337
+ + IA +G A NSAK +++
Sbjct: 292 ESKLRLIAGGFTEGPTAVNSAKAYLD 317
>pir||D72383 NADH oxidase - Thermotoga maritima (strain MSB8)
>gi|4980883|gb|AAD35465.1|AE001718_2 (AE001718) NADH
oxidase [Thermotoga maritima]
Length = 443
Score = 106 bits (263), Expect = 3e-22
Identities = 91/294 (30%), Positives = 133/294 (44%), Gaps = 36/294 (12%)
Query: 33 WDVIIIGAGPAGYTAAIYAARF-GLDTIIITKDLGGNMA---ITDLIENYPGFPEGISGS 88
+DV+++G GPAG AA RF G I++ K M I + G
Sbjct: 3 YDVVVVGGGPAGLVAAFTTKRFFGDKKILVVKKTEKEMVPCGIPYIFHTLGSVENDYMGI 62
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
E + K G+D++ DEVV +P E + T +GKE +IIA G+
Sbjct: 63 E------DRFKGAGIDLLIDEVVDGNPDEKKLF---------TKSGKEISYDKLIIATGS 107
Query: 149 EPRKLHVPG---EKEFT-GRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
P +PG + FT + Y + +V+++GGG ++ A + G
Sbjct: 108 SPNIPKIPGVDLKGVFTVPKEADYLKLLHEKVKDANDVVIIGGGFIGVEVADEIKKSGKN 167
Query: 205 VTLVHRRDK-----FRAD--KILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTG 257
VTLV D F D ++ + L+ + + VTEI GT KVE V L + G
Sbjct: 168 VTLVEIMDSLLPVSFDPDFGELARKELESDNVKVLTGRKVTEILGTEKVEGVKLDS---G 224
Query: 258 ETFEKKVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGD 310
ET D V + GY+P ++ + LG+ E G+I+ D YMRT P IFAAGD
Sbjct: 225 ETIP--ADVVVLATGYKPNSELARKLGLKVTELGFIETDEYMRTSKPDIFAAGD 276
>pir||D71655 thioredoxin reductase (trxB2) RP514 - Rickettsia prowazekii
>gi|3861066|emb|CAA14966.1| (AJ235272) THIOREDOXIN
REDUCTASE (trxB2) [Rickettsia prowazekii]
Length = 334
Score = 103 bits (254), Expect = 4e-21
Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 28/328 (8%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENY----PGFPEGISGS 88
D++IIG+GP G A A G+ +I +++ G IT E + P +P+ I+
Sbjct: 5 DIVIIGSGPVGLFAVFQAGMLGMKCHVIDAQEVIGGQCITLYPEKHIYDIPAYPK-IAAK 63
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA 148
EL K++ F+ V ++ + FE+KT+ K K IIIA GA
Sbjct: 64 ELIKQLESQAAP------FNPVYHLNQQATELNKHDDFFEIKTSKNTLIKSKVIIIAAGA 117
Query: 149 E---PRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
P K + + F G+ + Y D F+GK ++V GGG++A+ A+ L I K+
Sbjct: 118 GAFGPNKPPIANIEAFEGKSIFYFIN-DKSKFLGKNIVVAGGGDSAVDWAITLSEIANKI 176
Query: 206 TLVHRRDKFRA--DKILQDR-LKQAG-IPTILNTVVTEIRGTN-KVESVVLKNVKTGETF 260
LVHRRDKF A + + Q R + + G I + + + G N ++ SV++K+++
Sbjct: 177 YLVHRRDKFTAATESVRQLRHIAETGKIELVTGYQLNNLDGHNSELRSVIVKDLQNN--- 233
Query: 261 EKKVDGVFI--FIGYEPKTDFVKHLGITDEYGYIKVD-MYMRTKVPGIFAAGDITN-VFK 316
+K+D + F G + + + G +I+VD Y +T + GI+A GD+ + V K
Sbjct: 234 IRKLDANILLPFFGLKQDLGPLANWGFNVRLQHIEVDNYYYQTNIKGIYAIGDVAHYVGK 293
Query: 317 QIAVAVGQGAIAANSAKEFIESWNGKSI 344
+ G A + + ++GK++
Sbjct: 294 LKLIITGFAEAACSLHHAYSRVFDGKAL 321
>dbj|BAA21091.1| (D86223) glutamate synthase [Pyrococcus sp.]
Length = 481
Score = 101 bits (250), Expect = 1e-20
Identities = 98/344 (28%), Positives = 145/344 (41%), Gaps = 61/344 (17%)
Query: 29 ESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYPGFPEGIS 86
E K V IIGAGPAG TAA A+ G D I + GG + G PE
Sbjct: 153 EKKGQKVAIIGAGPAGLTAAGELAKLGYDVTIYEALHEPGGVLMY--------GIPEFRL 204
Query: 87 GSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAV 146
E+ + E ++K GV ++ D VV +T +E + + +
Sbjct: 205 PKEIVNKEIEKLRKLGVKILTDHVVG-----------------RTVTIEELLQEYDAVFI 247
Query: 147 GA---EPRKLHVPG--------EKEFTGRGVSYCATC----DGPLFVGKEVIVVGGGNTA 191
G+ PR ++ PG EF R A D P++VGK+VIV+G GNTA
Sbjct: 248 GSGAGTPRLINAPGINLNGIYTANEFLTRVNLMKAYLFPEYDTPVYVGKKVIVIGAGNTA 307
Query: 192 LQEALYLHSIGVKVTLVHRR--DKFRADKILQDRLKQAGIPTILNTVVTEIRG--TNKVE 247
+ A G +VT+ +RR + A + + K+ GI + E G +V+
Sbjct: 308 MDAARSARRFGAEVTIAYRRGEEDVSAREEEVEHAKEEGIKFVYFVNPVEFIGDENGRVK 367
Query: 248 SVVLKNVK---------------TGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYI 292
+V + +K TGE + D V I IG P + G+ E G I
Sbjct: 368 AVKFEKMKALDERDARGKRKIVGTGEYVTLEADTVIIAIGKHPNRLIINTPGLKVERGKI 427
Query: 293 KVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFI 336
VD + T +PG+FA GD + +A+G G AA + E++
Sbjct: 428 VVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRKAAKAIHEYL 471
>pir||D72382 hypothetical protein TM0395 - Thermotoga maritima (strain MSB8)
>gi|4980899|gb|AAD35480.1|AE001719_6 (AE001719) NADH
oxidase, putative [Thermotoga maritima]
Length = 425
Score = 101 bits (248), Expect = 2e-20
Identities = 100/320 (31%), Positives = 149/320 (46%), Gaps = 46/320 (14%)
Query: 36 IIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSELAKRMY 95
+I+G+GPAG A ++ I G + IT E Y G+ + L +++
Sbjct: 4 VIVGSGPAGLNA--------IEAIREVDKEGEILLIT--AEKYVGYSRPLITYLLGRKVT 53
Query: 96 EHVKKYGVDVIFDEV-VRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKLH 154
E Y + E+ V I PA P + V T +G+E + ++IA G +P
Sbjct: 54 EEKMYYRTEDYLREMRVDIKPATRVEKVIPEEKTVVTDSGEEIRYDKLLIATGGKP---F 110
Query: 155 VPGEKEFTGR-GVSYCATCDGPLFVGK--------EVIVVGGGNTALQEALYLHSIGVKV 205
VP + TG+ GV T + V K E +V+GGG L+ L +GVKV
Sbjct: 111 VPNIEGLTGKKGVFTFTTWEDEEKVEKYIEENDVKEAVVLGGGLIGLKTTEALMELGVKV 170
Query: 206 TLVHRRDKF-------RADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGE 258
T+V D+ +A +I+ + LK+ G I N V ++ G + V SVVL K+G+
Sbjct: 171 TIVELADRILSVTFDRKASEIITEALKKEGCSVITNDTVVKVNGDDTVSSVVL---KSGK 227
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRTKVPGIFAAGDITNVF--- 315
K+ + I IG +P +F+K GI G I V+ M T V G++AAGD T +
Sbjct: 228 EIPTKL--LVIAIGVKPNVEFLKDSGIEINRG-IVVNEKMETNVEGVYAAGDCTEFYDLI 284
Query: 316 ----KQIA---VAVGQGAIA 328
K IA VAV QG +A
Sbjct: 285 DGQRKTIAIWPVAVAQGRVA 304
>pir||T35296 probable dihydrolipoamide dehydrogenase - Streptomyces coelicolor
>gi|5578862|emb|CAB51264.1| (AL096872) putative
dihydrolipoamide dehydrogenase [Streptomyces coelicolor
A3(2)]
Length = 486
Score = 95.6 bits (234), Expect = 8e-19
Identities = 92/332 (27%), Positives = 147/332 (43%), Gaps = 40/332 (12%)
Query: 28 DESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKD-LGGNMAITDLIENYPGFPEGIS 86
D S V+D++I+G G GY AA+ A+ GLD +I K+ LGG I G
Sbjct: 28 DASTVFDLVILGGGSGGYAAALRGAQLGLDVALIEKNKLGGTCLHNGCIPTKALLHAGEV 87
Query: 87 GSEL-------AKRMYEHVKKYGVDVIFDEVVR---------IDPAECAYYEGPCQFEVK 130
+ K +E V GV DEV+ + + Y EG +
Sbjct: 88 ADQSRESEQFGVKTSFEGVDMAGVHKYKDEVIAGLYKGLQGLVASRKITYIEGEGRLSSP 147
Query: 131 TA---NGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVS--YCATCDGPLFVGKEVIVV 185
T+ NG+ +G+ +++A G+ P+ L PG + R +S + T D V K IV+
Sbjct: 148 TSVDVNGQRVQGRHVLLATGSVPKTL--PGLEIDGNRIISSDHALTLDR---VPKSAIVL 202
Query: 186 GGGNTALQEALYLHSIGVKVTLVHRR------DKFRADKILQDRLKQAGIPTILNTVVTE 239
GGG ++ A S G +VT++ + + K+L+ ++ GI L T +
Sbjct: 203 GGGVIGVEFASAWKSFGSEVTVIEGLKHLVPVEDENSSKLLERAFRKRGIKFNLGTFFQK 262
Query: 240 IRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFV--KHLGITDEYGYIKVDMY 297
T V L + G+ FE +V + + IG P + + + G+ + G++ VD Y
Sbjct: 263 AEYTQDGVKVTLAD---GKEFEAEV--LLVAIGRGPVSQGLGYEENGVATDRGFVLVDEY 317
Query: 298 MRTKVPGIFAAGDITNVFKQIAVAVGQGAIAA 329
MRT VP I A GD+ + V +G + A
Sbjct: 318 MRTNVPTISAVGDLVPTLQLAHVGFAEGILVA 349
>dbj|BAB04498.1| (AP001509) dihydrolipoamide dehydrogenase [Bacillus halodurans]
Length = 462
Score = 94.8 bits (232), Expect = 1e-18
Identities = 88/350 (25%), Positives = 147/350 (41%), Gaps = 45/350 (12%)
Query: 31 KVWDVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENYPGFPEG----- 84
K +D+++IG GP GY AAI AA+ G ++ KDLGG I + +G
Sbjct: 2 KSYDIVVIGGGPGGYVAAIKAAKLGKKVALVEAKDLGGTCLNRGCIPSKTLLHQGEIIEK 61
Query: 85 ---------------ISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFE- 128
+S ++ R E ++K + F + + Y G + E
Sbjct: 62 IKQAKEWGIETGAVTLSLPKMLARKNEIIQKLRAGIHF----LLKQGKIDVYFGYGEIER 117
Query: 129 --------VKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGK 180
+TA + + +I+A G EP VPG E D + +
Sbjct: 118 DRSVKIKMKETAEIVSVRTENMIVATGTEPTIPPVPGLAEAVVDTSDTIFELDS---IPQ 174
Query: 181 EVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKF------RADKILQDRLKQAGIPTILN 234
++++GGG ++ A S+ V VT+V + A K+L L G+ + N
Sbjct: 175 SIVIIGGGVIGVEIACIFSSLQVDVTIVEMGKRILPQEDEEAAKVLAKALAAKGVHLLTN 234
Query: 235 TVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKV 294
T VT + +K + + TG+ + + + + +G P VK LG+ ++KV
Sbjct: 235 TKVTAVLQGDKQKVEI--ETSTGDRDWLEGERILLAVGRTPNLSVVKELGLGMAGPFLKV 292
Query: 295 DMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIESWNGKSI 344
D MRT P I+A GD+ ++ VA +G +AA +A +E N + I
Sbjct: 293 DDQMRTSDPSIYAIGDVIGGWQLAHVASAEGLVAAANASGKVEIINRQVI 342
>pir||C75218 probable monooxygenase PAB0184 - Pyrococcus abyssi (strain Orsay)
>gi|5457703|emb|CAB49194.1| (AJ248283) PROBABLE
MONOOXYGENASE [Pyrococcus abyssi]
Length = 407
Score = 92.4 bits (226), Expect = 7e-18
Identities = 100/334 (29%), Positives = 151/334 (44%), Gaps = 41/334 (12%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKD--LGGNMAITDLIENYPGF-----PEG 84
++DV +IG GPAG AAI A GL I+I ++ LGG + I +PGF E
Sbjct: 1 MYDVAVIGGGPAGMAAAIKARELGLSVILIDENDYLGG--ILPQCI--HPGFGIHYFKEE 56
Query: 85 ISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANG-KEYKGKTII 143
++G E A ++ ++ V V I+ Y + + +V + +G +E + KTII
Sbjct: 57 LTGPEFAYKLMNRLRDVEVRTSARVVEIIN-----YSDIEKRLKVISPSGIEEIRAKTII 111
Query: 144 IAVGAEPR---KLHVPGEKE---FTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALY 197
A GA R ++ + G++ FT G + G+E+++VG G+ L A
Sbjct: 112 YAAGARERHAFEIGITGDRVAGIFTAGEAQTLMDIYG-IMPGREILIVGSGDVGLIMARR 170
Query: 198 LHSIGVKVTLVHRRDKF-----RADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLK 252
G +V V + R IL D IP L+ V EIRG +V+ V +
Sbjct: 171 FALEGARVKAVIELMPYPGGLARNVMILND----FNIPLYLSHKVVEIRGKGRVQRVKIV 226
Query: 253 NVKT------GETFEKKVDGVFIFIGYEPKTDFVKHLGITDE--YGYIKVDMYMRTKVPG 304
V G F VD V I G P + +G+ + G V+ + T VPG
Sbjct: 227 KVDENLREIPGTEFWVDVDTVIISAGLIPNVKLLTKVGVAIDPSTGGPIVNDRLETTVPG 286
Query: 305 IFAAGDITNVFKQIAVAVGQGAIAANSAKEFIES 338
IF AG+ + + V QG +AA AKEFI++
Sbjct: 287 IFVAGNALVINDLVDYVVEQGELAAEGAKEFIDN 320
>gb|AAD17483.1| (AF047034) dihydrolipoamide dehydrogenase [Streptomyces seoulensis]
Length = 462
Score = 91.7 bits (224), Expect = 1e-17
Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 40/332 (12%)
Query: 28 DESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAI------TDLIENYPGF 81
D S V+D++I+G G GY AA+ A+ GLD +I KD G + T + +
Sbjct: 4 DASTVFDLVILGGGSGGYAAALRGAQLGLDVALIEKDKVGGTCLHKGCIPTKALLHAGEI 63
Query: 82 PEGISGSEL--AKRMYEHVKKYGVDVIFDEVVR---------IDPAECAYYEGPCQFEVK 130
+ SE K +E + V D+V+ I + Y EG +
Sbjct: 64 ADQARESEQFGVKATFEGIDVPAVQKYKDDVISGLYKGLQGLIASRKVTYIEGEGRLSSP 123
Query: 131 TA---NGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVS--YCATCDGPLFVGKEVIVV 185
T+ NG+ +G+ +++A G+ P+ L PG + R +S + D V K I++
Sbjct: 124 TSVDVNGQRIEGRHVLLATGSVPKSL--PGLQIDGDRIISSDHALVLDR---VPKSAIIL 178
Query: 186 GGGNTALQEALYLHSIGVKVTLVHRR------DKFRADKILQDRLKQAGIPTILNTVVTE 239
GGG ++ A S G VT++ + + K+L+ ++ GI L T +
Sbjct: 179 GGGVIGVEFASAWKSFGADVTVIEGLKHLVPVEDENSSKLLERAFRKRGIKFSLGTFFEK 238
Query: 240 IRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFV--KHLGITDEYGYIKVDMY 297
T V L + G+ FE +V + + +G P + + + G+ + GY+ VD Y
Sbjct: 239 AEYTQDGVKVTLAD---GKEFEAEV--LLVAVGRGPVSQNLGYEEQGVNIDRGYVLVDEY 293
Query: 298 MRTKVPGIFAAGDITNVFKQIAVAVGQGAIAA 329
MRT VP I A GD+ + V +G + A
Sbjct: 294 MRTNVPTISAVGDLVPTLQLAHVGFAEGILVA 325
>pir||T44300 probable pyridine nucleotide-disulfide oxidoreductase (EC 1.-.-.-)
ahpF [imported] - Bacillus halodurans
>gi|4512354|dbj|BAA75319.1| (AB011836) alkyl
hydroperoxide reductase large subunit [Bacillus
halodurans] >gi|10173271|dbj|BAB04376.1| (AP001509)
pyridine nucleotide-disulphide oxidoreductase, class II
[Bacillus halodurans]
Length = 305
Score = 90.9 bits (222), Expect = 2e-17
Identities = 87/318 (27%), Positives = 147/318 (45%), Gaps = 25/318 (7%)
Query: 29 ESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGF--PEGIS 86
E + DV IIG GPAG AA+ R +I + N A+T GF +GIS
Sbjct: 2 EKQQLDVAIIGGGPAGLNAALVLGRARKQVAVIDEGRPRN-AVT---REAHGFLTRDGIS 57
Query: 87 GSELAKRMYEHVKKY-GVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
++ + E + Y V + D+ V I A +G QF++ TA G ++ K ++ A
Sbjct: 58 PADFRRIAKEEIIAYPNVSFVADKAVSI-----AGVDG--QFQIVTAEGISFETKKLLFA 110
Query: 146 VGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
VG + R L +PG E G+ C CDG + ++V+ G L A + +
Sbjct: 111 VGMKDRPLDIPGLVEAYGKSAFVCPYCDGWELRDESLVVINKGEELLHFAPIISGWTDRF 170
Query: 206 TL-VHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKV 264
T+ + D+ D+ ++ L++ +P + + + V VVL++ G +
Sbjct: 171 TICTNGPDELTEDQ--REELRRHQVPVYDSPIRSIDSNDGIVHQVVLQD---GTIIPCR- 224
Query: 265 DGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVG 323
G+F P +D + +G E G + VD + +T VPG+++AGD+ + Q A
Sbjct: 225 -GIFFKPELIPGSDLPQSIGCDITEAGMVVVDDFGKTSVPGVYSAGDVASKMYQAIAAAS 283
Query: 324 QGAI--AANSAKEFIESW 339
GA+ AA + + +E+W
Sbjct: 284 MGALTAAAMNNELNMEAW 301
>sp|P75393|DLDH_MYCPN DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONENT OF PYRUVATE COMPLEX)
>gi|2146099|pir||S73774 dihydrolipoamide dehydrogenase
(EC 1.8.1.4) pdhD - Mycoplasma pneumoniae (strain ATCC
29342) >gi|1674136|gb|AAB96096.1| (AE000044)
dihydrolipoamide dehydrogenase [Mycoplasma pneumoniae]
Length = 457
Score = 87.8 bits (214), Expect = 2e-16
Identities = 89/330 (26%), Positives = 140/330 (41%), Gaps = 41/330 (12%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMA----------------ITDLIE 76
+D+IIIGAGPAGY AA YA + L T+++ K+ G + I D +
Sbjct: 3 YDLIIIGAGPAGYVAAEYAGKHKLKTLVVEKEYFGGVCLNVGCIPTKTLLKRAKIVDYLR 62
Query: 77 NYPGFPEGISG------SELAKRMYEHVKKY--GVDVIFDEVVRIDPAECAYYEGPCQFE 128
+ + I+G ++L ++ + V K GV I A P E
Sbjct: 63 HAQDYGISINGQVALNWNQLLEQKGKVVSKLVGGVKAIIASAKAETVMGEAKVLDPNTVE 122
Query: 129 VKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPL-FVGKEVIVVGG 187
V GK Y K+I++A G+ PR L +PG E G +T L V ++++VVGG
Sbjct: 123 VA---GKTYTTKSIVVATGSRPRYLTLPGFAEARQNGFVIDSTQALSLEGVPRKLVVVGG 179
Query: 188 GNTALQEALYLHSIGVKVTLVHRRDKF------RADKILQDRLKQAGIPTILNTVVTEIR 241
G ++ A S+G +VT++ D+ ++ L+ + I N VT
Sbjct: 180 GVIGIEFAFLYASLGSEVTILQGVDRILEIFDTEVSDLVAKLLQTKNVKIITNAQVTR-- 237
Query: 242 GTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRT 300
N E +N + G D + + IG P T+ + L + DE I ++ ++T
Sbjct: 238 -ANNNEVFYSQNGQEGSVVG---DRILVSIGRIPNTECLDGLNLQRDERNRIVLNQDLQT 293
Query: 301 KVPGIFAAGDITNVFKQIAVAVGQGAIAAN 330
+P I+ GD A QG A N
Sbjct: 294 SIPNIYIVGDANAQLMLAHFAYQQGRYAVN 323
>pir||A82753 dihydrolipoamide dehydrogenase XF0868 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9105778|gb|AAF83678.1|AE003926_7 (AE003926)
dihydrolipoamide dehydrogenase [Xylella fastidiosa]
Length = 603
Score = 85.8 bits (209), Expect = 7e-16
Identities = 93/348 (26%), Positives = 144/348 (40%), Gaps = 53/348 (15%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYPGFPEGISGSELAK 92
++++GAGP GYTAA AA GLDT+++ + +LGG I + E A
Sbjct: 124 MVVLGAGPGGYTAAFRAADLGLDTVLVERYPNLGGVCLNVGCIPSKALLHAAAVIDEAA- 182
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAE---------------------------CAYYEGPC 125
H +G+D ++ E A++ P
Sbjct: 183 ----HASTFGIDFGKPKITLDTLREYKQNVVNKLTAGLAGMAKQRKVRTVTGIAHFVSPN 238
Query: 126 QFEVKTANGKEYK--GKTIIIAVGAEPRKL-HVPGEKEFTGRGVSYCATCDGPLFVGKEV 182
++ TA+G + + IIA G+ P KL + P + + P K++
Sbjct: 239 TLDITTADGSTQRLHFQQCIIATGSHPVKLPNFPWDDPRIMDSTDALELAEVP----KKL 294
Query: 183 IVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRAD------KILQDRLKQAGIPTILNTV 236
+VVGGG L+ A +++G VT+V D+ K L DR+K+ GI LNT
Sbjct: 295 LVVGGGIIGLEMATVYNALGSHVTIVEFMDQIIPGTDKDLVKPLADRMKKQGIEIHLNTK 354
Query: 237 VTEIRGTNKVESVVLKNVKTGETFEKKV---DGVFIFIGYEPKTDFV--KHLGIT-DEYG 290
+ ++ K +V + G K D V + +G P + + + G+ E G
Sbjct: 355 ASHVKADKKGITVSFEAPTQGTQPALKTSTYDRVLVAVGRTPTGNNIGAEKAGVNVTERG 414
Query: 291 YIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIES 338
+I VD MR+ VP IFA GDI A +G +AA A ES
Sbjct: 415 FIPVDRQMRSNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAAETES 462
>sp|Q04829|DLDH_HALVO DIHYDROLIPOAMIDE DEHYDROGENASE >gi|1076150|pir||A56824
dihydrolipoamide dehydrogenase (EC 1.8.1.4) - Haloferax
volcanii >gi|149020|gb|AAA72340.1| (L09733)
dihydrolipoamide dehydrogenase [Haloferax volcanii]
Length = 475
Score = 85.4 bits (208), Expect = 9e-16
Identities = 98/342 (28%), Positives = 158/342 (45%), Gaps = 60/342 (17%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEG--ISGSELA 91
++++IGAGP GY AAI AA+ G+DT ++ KD G + NY P I+G+ LA
Sbjct: 11 ELLVIGAGPGGYVAAIRAAQNGIDTTLVEKDAYGGTCL-----NYGCIPSKALITGANLA 65
Query: 92 ------KRMYEHV------------KKYGVDVIFDEVVRIDPAECA-YYEGPCQFE---- 128
+ M H K VD + V ++ A EG +F+
Sbjct: 66 HEAGNAEEMGIHADPVVDMSQLRDWKSGVVDQLTGGVEKLCKANGVNLVEGTARFKDENA 125
Query: 129 VKTANGKEYKG-KTI-----IIAVGAEPRKLHVPG-----EKEFTGRGVSYCATCDGPLF 177
V+ A+G E +G +TI IIA G+ R + +PG E ++ R T
Sbjct: 126 VRIAHGGEGQGSETIEFEHCIIATGS--RVIQIPGFDFGDEPVWSSRDALEADT------ 177
Query: 178 VGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDK----FRAD--KILQDRLKQAGIPT 231
V + ++VVGGG ++ + +G VT+V D + +D ++++ R ++ GI
Sbjct: 178 VPERLVVVGGGYIGMELSTTFAKLGADVTVVEMLDDILPGYESDVARVVRKRAEELGIDM 237
Query: 232 ILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDF--VKHLGI-TDE 288
L T R + +V + GE E + D V + +G P TD +++ G+ D+
Sbjct: 238 HLGEGATGWREEDD-GIMVTTETEDGEENEYRADKVLVAVGRSPVTDTMDIENAGLEADD 296
Query: 289 YGYIKVDMYMRTKVPGIFAAGDITNVFKQIA-VAVGQGAIAA 329
G++ VD RT V I+A GD+ +A VA +G +AA
Sbjct: 297 RGFLSVDDRRRTDVEHIYAVGDVVEDTPMLAHVASKEGIVAA 338
>pir||B75252 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6460452|gb|AAF12160.1|AE002091_6 (AE002091)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 332
Score = 85.4 bits (208), Expect = 9e-16
Identities = 89/333 (26%), Positives = 138/333 (40%), Gaps = 41/333 (12%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGF-------PE- 83
++DV I+GAGP G AAI R GL +++ K + + I YP + PE
Sbjct: 3 LYDVAIVGAGPVGLAAAIGCKRAGLSYVVLEKG-----CVVNAIFEYPTYMGFFTTAPEL 57
Query: 84 ------GISGSELAKR----MYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTAN 133
++G + R MY + ++ + ++ A + E +
Sbjct: 58 EIGNHPFVTGHDKPDRRDALMYYRLVTQRENLNVRQYTTVNKVHAAPAGFTLEIEAQDGT 117
Query: 134 GKEYKGKTIIIAVG--AEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTA 191
+ + +++A G P + +PGE VS+ T P F+G V V+G GN+A
Sbjct: 118 PGVVEARRVVVATGYYDNPLSMGIPGE---DSENVSHYYTEAHP-FMGLNVTVIGAGNSA 173
Query: 192 LQEALYLHSIGVKVTLVHRRD------KFRADKILQDRLKQAGIPTILNTVVTEIRGTNK 245
AL L GV VT+V R K+ L++R+K+ I N+ V EI
Sbjct: 174 ADAALDLWRSGVNVTMVVRAPELKSTIKYWVRPDLENRIKEGSIHAHFNSRVVEIH---- 229
Query: 246 VESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRTKVPG 304
E VV++ + G TFE D F GY P F+ L + T + + + VPG
Sbjct: 230 PEHVVVQG-EDGRTFELPTDFTFALTGYRPDLSFLDGLNLATQPDECLVLTENYESSVPG 288
Query: 305 IFAAGDITNVFKQIAVAVGQGAIAANSAKEFIE 337
+F G K V + G A+ A IE
Sbjct: 289 LFVVGSAGFAGKTNQVFIENGRFHADHAVAEIE 321
>pir||D71076 probable glutamate synthase small chain - Pyrococcus horikoshii
>gi|3257287|dbj|BAA29970.1| (AP000004) 472aa long
hypothetical glutamate synthase small chain [Pyrococcus
horikoshii]
Length = 472
Score = 84.7 bits (206), Expect = 1e-15
Identities = 93/344 (27%), Positives = 139/344 (40%), Gaps = 58/344 (16%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYPGFPEGISGSELAK 92
V ++GAGPAG T A A+ G I GG +A G PE E+
Sbjct: 151 VAVVGAGPAGLTCAGELAKMGYKVTIFEALHKPGGVLAY--------GIPEFRLPKEILD 202
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGA-EPR 151
+ +K GV++ D VV + T + + + I GA P+
Sbjct: 203 HELKKLKMLGVEIRTDHVVG---------------KTVTLDELLQEYDAVFIGTGAGTPK 247
Query: 152 KLHVPG--------EKEFTGRGVSYCA----TCDGPLFVGKEVIVVGGGNTALQEALYLH 199
L++PG EF R A D P+ VGK+VIV+G GNTA+ A
Sbjct: 248 LLNIPGILLDRIYSANEFLTRINLMKAYEFPEYDTPIAVGKKVIVIGAGNTAMDAARSAL 307
Query: 200 SIGVKVTLVHRRDK----FRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVK 255
+G +VT+ +RR + R ++I + L V +V++V + K
Sbjct: 308 RLGAEVTIAYRRGREDMTAREEEIKHAEEEGVKFEFFLQPVEFIGDENGRVKAVKFERTK 367
Query: 256 ---------------TGETFEKKVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMR 299
TGE + D V I IG EP + + T+ G I VD +
Sbjct: 368 PLEERDSKGKRKIVGTGEYVTLEADTVIIAIGLEPNKIITEDGRLKTNPDGTIVVDENLM 427
Query: 300 TKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIESWNGKS 343
T +PG+FA GD + +A+G G AA + E+I G++
Sbjct: 428 TSIPGVFAGGDAIRGEATVILAMGDGKRAAKAIDEYIRRKRGQN 471
>pir||C75144 sarcosine oxidase, chain alpha (soxa) PAB0212 - Pyrococcus abyssi
(strain Orsay) >gi|5457744|emb|CAB49234.1| (AJ248284)
sarcosine oxidase, subunit alpha (soxA) [Pyrococcus
abyssi]
Length = 481
Score = 83.1 bits (202), Expect = 4e-15
Identities = 86/324 (26%), Positives = 141/324 (42%), Gaps = 35/324 (10%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKD--LGGNMA-ITDLIENYPGFPEGISGSEL 90
D+I+IG GPAG AAI A G ++I ++ LGG + T G+ G ++
Sbjct: 121 DIIVIGGGPAGMMAAISAHDAGAKVVLIDENPMLGGQLVKQTHKFFGKRSQFAGVRGVKI 180
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEV---KTANGKEYKGKTIIIAVG 147
A+ + VKK ++V A + +G + V K + E G+ II+A G
Sbjct: 181 AEILENEVKKRNIEVFLQ-----TSAVGIFQDGNEKIVVGIRKESELIELHGRAIIVATG 235
Query: 148 AEPRKLHVPGEKE----FTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGV 203
A + VP E G G + G++ ++VG GN L A L GV
Sbjct: 236 AMEKS--VPFENNDLPGIYGAGAIQTLMNTYGVKPGEKALIVGAGNVGLILAYQLIQAGV 293
Query: 204 KV-TLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVK------- 255
KV +V K + ++++ G+P + + G KVE ++ +
Sbjct: 294 KVEAIVEAMPKIGGYFVHAAKVRRLGVPILTRHTILRAEGKEKVERAIVAQIDENWRPIP 353
Query: 256 -TGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEY-----GYIKV-DMYMRTKVPGIFAA 308
T + F+ VD + I +G P + ++ G Y G++ V D ++ T V GIF A
Sbjct: 354 GTEKIFD--VDLIAIAVGLRPSIELLQQAGCQIRYVRELGGHVAVRDEWLETTVRGIFVA 411
Query: 309 GDITNVFKQIAVAVGQGAIAANSA 332
GD + ++ A+ +G IA +A
Sbjct: 412 GDTAGI-EEATTAMLEGKIAGIAA 434
>pir||F72254 hypothetical protein TM1433 - Thermotoga maritima (strain MSB8)
>gi|4981998|gb|AAD36503.1|AE001795_6 (AE001795)
oxidoreductase, putative [Thermotoga maritima]
Length = 403
Score = 82.7 bits (201), Expect = 6e-15
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 30/324 (9%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPG---FPEGISGSEL 90
DV++IGAG AG AA+ A G + +++ +D + I N G F + ++G E
Sbjct: 4 DVMVIGAGAAGMAAALKAKEEGAEVLLVERDERTGGILNQCIHNGFGLHYFRQELTGPEY 63
Query: 91 AKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
A+R E ++K G+ + + V+ E V +E + ++ A GA
Sbjct: 64 AERFQEKMEKMGIRALTNAYVK-------RVEDRRVILVTEQGIEEVEVGALVYATGARE 116
Query: 151 R---KLHVPGEKE---FTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVK 204
R L +PG++ FT + L GK +++G G+ L A L G++
Sbjct: 117 RPFGSLMIPGDRPSGIFTAGVAQRLINIENRL-PGKRALILGSGDIGLIMARRLTLEGME 175
Query: 205 VTLVHRRDKFRADKI--LQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNV-------- 254
V V R + + + L+ IP L++ V E+RG ++E VV+ V
Sbjct: 176 VVGVVERLPYAGGLLRNVIQCLEDYNIPLYLSSTVVEVRGRERLEEVVVAKVDEQFRPIP 235
Query: 255 KTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGY-IKVDMYMRTKVPGIFAAGDITN 313
+T F KVD + + +G P+ + +++L + + + V +T IF+AG+ T
Sbjct: 236 RTERVF--KVDTLVLSVGLIPQVELIENLVVKNPTSRGVGVSNIGQTSRDWIFSAGNCTV 293
Query: 314 VFKQIAVAVGQGAIAANSAKEFIE 337
+F + +G A A +F++
Sbjct: 294 IFDLVDYVSYEGETAGRYAAKFVK 317
>emb|CAB61613.1| (AL133210) putative reductase [Streptomyces coelicolor A3(2)]
Length = 311
Score = 82.3 bits (200), Expect = 8e-15
Identities = 83/314 (26%), Positives = 135/314 (42%), Gaps = 22/314 (7%)
Query: 24 KSRVDESKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPE 83
K D S +DV+++G G AG +AA+ R L T+++ N A +D ++ Y +
Sbjct: 8 KDPKDPSGRYDVVVVGGGAAGLSAALVLGRSRLRTLVVDAGEPRN-APSDHMQGYL-TRD 65
Query: 84 GISGSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTII 143
G+S +E E + +YGVD++ D V + F V+ G + +I
Sbjct: 66 GMSPAEFLALGREEIARYGVDLVRDRAVDV--------SSDGDFAVELGGGDTVHARRLI 117
Query: 144 IAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGV 203
+ G VPG E GR V +C C G + V+ ++ +AL +
Sbjct: 118 VTTGLRDELPAVPGVAERYGRDVLHCPFCHGWEVRDERFGVLASSPLSVHQALMVSGWSD 177
Query: 204 KVTL-VHR-RDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFE 261
VTL +H ++ +D L+ RL AG+ + V +VE L V+ +
Sbjct: 178 DVTLFLHTVAERELSDDDLR-RLAAAGVKVVPGEV-----AALRVEDDRLTGVRLADGTA 231
Query: 262 KKVDGVFIFIGYEPKTDFVKHLGI----TDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQ 317
VF+ P+T ++ LG T Y VD RT VPG++ AG+ +Q
Sbjct: 232 HDRTVVFVAPKAVPQTGLMERLGAELQETPFGAYPVVDPTGRTSVPGVWTAGNAMGFAEQ 291
Query: 318 IAVAVGQGAIAANS 331
+ A G AA++
Sbjct: 292 VVHAASGGYRAASA 305
>gi|11499442 NADH oxidase (noxA-5) [Archaeoglobus fulgidus]
>gi|7447172|pir||A69482 NADH oxidase (noxA-5) homolog -
Archaeoglobus fulgidus >gi|2648692|gb|AAB89398.1|
(AE000975) NADH oxidase (noxA-5) [Archaeoglobus
fulgidus]
Length = 448
Score = 81.5 bits (198), Expect = 1e-14
Identities = 76/293 (25%), Positives = 123/293 (41%), Gaps = 35/293 (11%)
Query: 33 WDVIIIGAGPAGYTAAIYAARF--GLDTIIITKDLGGNMAITDLIE-NYPGFPEGISGSE 89
+DV+IIG GPAG A A +F II K+ T L+ P + + E
Sbjct: 6 YDVLIIGGGPAGIVTATTAKKFYPAKSVAIIKKE------ETSLVPCGIPYIFKTLGSVE 59
Query: 90 LAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAE 149
+ + G++ I DEV +D V+T GK + ++ A G+
Sbjct: 60 ADVMPTKPAENLGIEFIIDEVEDVDVKAKV---------VRTKGGKSISYEKLVFATGST 110
Query: 150 PRKLHVPGEKE---FT-GRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKV 205
P + G ++ FT + + + ++V++VGGG ++ + G K
Sbjct: 111 PVMPRIEGVEKKGVFTVSKNIEELRKLHEAVKKAEKVVIVGGGFIGVEVGEQIAKAGKKF 170
Query: 206 TLVHRRDKF-------RADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGE 258
T+V D+ +I ++ LK+ G+ LN+ V I G + VE+V L + + E
Sbjct: 171 TMVEMMDQLLPAAFDKEFARIAEEELKKLGVEVYLNSTVKRITGNSSVEAVELADGRKIE 230
Query: 259 TFEKKVDGVFIFIGYEPKTDFVKHLGITDEYG-YIKVDMYMRTKVPGIFAAGD 310
D V + +GY P + K G+ G I D Y RT +FA GD
Sbjct: 231 -----ADVVIMSVGYRPNIELAKKAGLRISIGNRIWTDEYGRTSEKDVFAVGD 278
>dbj|BAA08961.1| (D50453) homologue of thioredoxin reductase of Mycoplama genitalium
[Bacillus subtilis]
Length = 179
Score = 81.1 bits (197), Expect = 2e-14
Identities = 46/160 (28%), Positives = 89/160 (54%), Gaps = 4/160 (2%)
Query: 182 VIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIR 241
+++ GGG+TA+ A L I VT+VHRR++F + ++KQ+ + + + ++
Sbjct: 1 MVISGGGDTAVDWANELEPIAASVTVVHRREEFGGMESSVTKMKQSSVRVLTPYRLEQLN 60
Query: 242 GTNK-VESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGYIKVDMYMRT 300
G + ++SV + + ++G+ + ++D + I G++ + G+ E G +K D +MRT
Sbjct: 61 GDEEGIKSVTVCHTESGQRKDIEIDELIINHGFKIDLGPMMEWGLEIEEGRVKADRHMRT 120
Query: 301 KVPGIFAAGDIT---NVFKQIAVAVGQGAIAANSAKEFIE 337
+PG+F AGD + + IA +G A NSAK +++
Sbjct: 121 NLPGVFVAGDAAFYESKLRLIAGGFTEGPTAVNSAKAYLD 160
>emb|CAB51948.1| (AJ243915) thioredoxin reductase [Staphylococcus xylosus]
Length = 92
Score = 81.1 bits (197), Expect = 2e-14
Identities = 38/83 (45%), Positives = 60/83 (71%), Gaps = 2/83 (2%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
+D+ IIGAGPAG TAA+YA+R L T++I + + GG MA T+ +EN+PGF E ++G +L+
Sbjct: 7 FDIAIIGAGPAGMTAAVYASRANLSTVMIERGMPGGQMANTEEVENFPGF-EMVTGPDLS 65
Query: 92 KRMYEHVKKYGVDVIFDEVVRID 114
+M+EH KK+G + ++ I+
Sbjct: 66 TKMFEHAKKFGAKYQYGDIKSIE 88
>sp|P48641|GSHR_ARATH GLUTATHIONE REDUCTASE, CYTOSOLIC (GR) (GRASE) (OBP29)
>gi|1022797|gb|AAB67841.1| (U37697) glutathione
reductase [Arabidopsis thaliana]
Length = 499
Score = 79.6 bits (193), Expect = 5e-14
Identities = 103/377 (27%), Positives = 158/377 (41%), Gaps = 79/377 (20%)
Query: 15 KMFSLGGLGKSRVDESKV----WDVIIIGAGPAGYTAAIYAARFGLDTII-------ITK 63
KM G + K DE+ +D+ +IGAG G AA ++A G I I+
Sbjct: 4 KMLVDGEIDKVAADEANATHYDFDLFVIGAGSGGVRAARFSANHGAKVGICELPFHPISS 63
Query: 64 D----LGGNMAITDLIENYPGFPEGISGSELAKRMYEHVKKYG------VDVIF------ 107
+ +GG I + G EL E K YG VD +
Sbjct: 64 EEIGGVGGTCVIRGCVPKKILVYGATYGGEL-----EDAKNYGWEINEKVDFTWKKLLQK 118
Query: 108 --DEVVRIDP--------AECAYYEG------PCQFEVKTANGKE--YKGKTIIIAVGAE 149
DE++R++ A YEG P + EV+ +G + Y K I+IA G+
Sbjct: 119 KTDEILRLNNIYKRLLANAAVKLYEGEGRVVGPNEVEVRQIDGTKISYTAKHILIATGSR 178
Query: 150 PRKLHVPGEKEFTGRGVSYCATCDGPLFVG---KEVIVVGGGNTALQEALYLHSIGVKVT 206
+K ++PG + T D L + K IV+GGG A++ A +G V
Sbjct: 179 AQKPNIPGHE--------LAITSDEALSLEEFPKRAIVLGGGYIAVEFASIWRGMGATVD 230
Query: 207 LVHRR--------DKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGE 258
L R+ D+ RA ++ L+ G+ T +T++ T++ V+ + GE
Sbjct: 231 LFFRKELPLRGFDDEMRA--LVARNLEGRGVNLHPQTSLTQLTKTDQGIKVISSH---GE 285
Query: 259 TFEKKVDGVFIFIGYEPKTDFV--KHLGIT-DEYGYIKVDMYMRTKVPGIFAAGDITNVF 315
F D V G P T + + +G+ D+ G +KVD Y RT +P I+A GD TN
Sbjct: 286 EFV--ADVVLFATGRSPNTKRLNLEAVGVELDQAGAVKVDEYSRTNIPSIWAVGDATNRI 343
Query: 316 KQIAVAVGQGAIAANSA 332
VA+ + AN+A
Sbjct: 344 NLTPVALMEATCFANTA 360
>sp|P08663|MERA_STAAU MERCURIC REDUCTASE (HG(II) REDUCTASE) >gi|79885|pir||E29504
mercury(II) reductase (EC 1.16.1.1) - Staphylococcus
aureus plasmid pI258 >gi|459907|gb|AAA98245.1| (L29436)
mercuric reductase [Plasmid pI258]
Length = 547
Score = 79.2 bits (192), Expect = 7e-14
Identities = 79/344 (22%), Positives = 143/344 (40%), Gaps = 63/344 (18%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMA----------------ITDLIE 76
+D++IIG+G A ++AAI A G ++ + G I L +
Sbjct: 86 YDLLIIGSGGAAFSAAIKANENGAKVAMVERGTVGGTCVNIGCVPSKTMLRAGEINGLAQ 145
Query: 77 NYP--GFPEGISGSELAK---------------RMYEHVKKYGVDVIFDEVVRIDPAECA 119
N P G ++LA+ + + +++YG D+I E ID
Sbjct: 146 NNPFTGLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDD---- 201
Query: 120 YYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLF-- 177
+ NG+ K+ +IA GA P +PG E V Y +
Sbjct: 202 --------KTIQVNGQNITSKSFLIATGASPAVPEIPGMNE-----VDYLTSTSALELKE 248
Query: 178 VGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKF------RADKILQDRLKQAGIPT 231
V + + V+G G A + H++G +VTL+ R ++ + + + L + G+
Sbjct: 249 VPQRLAVIGSGYIAAELGQMFHNLGTEVTLMQRSERLFKTYDPEISEAIDESLTEQGLNL 308
Query: 232 ILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFV--KHLGI-TDE 288
I ++ K S+ ++ G+ + D V + G +P T+ + + G+ T +
Sbjct: 309 ITGVTYQKVEQNGKSTSIYIE--VNGQEQVIEADQVLVATGRKPNTETLNLESAGVKTGK 366
Query: 289 YGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSA 332
G + + Y++T I+AAGD+T + + VA +G I AN+A
Sbjct: 367 KGEVLTNEYLQTSNNRIYAAGDVTLGPQFVYVAAYEGGIVANNA 410
>dbj|BAB05212.1| (AP001512) reductase [Bacillus halodurans]
Length = 298
Score = 79.2 bits (192), Expect = 7e-14
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 18/301 (5%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSELA 91
+++ +I+G G AG AAI R+ II GG ++ N G+P+GISG +
Sbjct: 1 MYECVIVGGGIAGLQAAIQLGRYEHHVAIIDNG-GGRSSLCRRYHNLLGWPDGISGQAIR 59
Query: 92 KRMYEHVKKYGVDVIFDEVVRID-PAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEP 150
+ + GV+ I V + AE F ++T + ++ K +++A G
Sbjct: 60 EAGRKQATSLGVEFIDSSVHSVRRQAE--------HFVIETES-TTFEAKRLLLATGISD 110
Query: 151 RKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHR 210
R P G+ V C CDG G++ IV+G G +L L +T ++
Sbjct: 111 RIPPFPSLYPMLGKHVFLCPDCDGYEVRGQDTIVIGSGQAGANLSLALTYWKPNLTYINH 170
Query: 211 RDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIF 270
+ + ++ + +L I + V T + + V+L++ T
Sbjct: 171 EQQPLSPEV-EQKLASKNILVVHEKVETILHDEETFQGVMLQD----GTVHSAPKAFLAM 225
Query: 271 IGYEPKTDFVKHLGI--TDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIA 328
G + ++D K LG+ + + + T V ++A GD+T + +++A+G GA A
Sbjct: 226 GGAKVESDLAKQLGVERLENHHIVVNPRTKETNVKHVWAVGDVTVHSQLLSIAMGDGAQA 285
Query: 329 A 329
A
Sbjct: 286 A 286
>pir||H71183 probable D-nopaline dehydrogenase - Pyrococcus horikoshii
>gi|3258180|dbj|BAA30863.1| (AP000007) 482aa long
hypothetical D-nopaline dehydrogenase [Pyrococcus
horikoshii]
Length = 482
Score = 78.4 bits (190), Expect = 1e-13
Identities = 84/327 (25%), Positives = 141/327 (42%), Gaps = 40/327 (12%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKD--LGGNMA-----ITDLIENYPGFPEGIS 86
D+I++G GPAG AAI A+ G I+I + LGG + + + G GI
Sbjct: 122 DIIVVGGGPAGMMAAISASDTGAKVILIDESPMLGGQLVKQTHKFFGKRDQFAGI-RGIK 180
Query: 87 GSELAKRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGK-EYKGKTIIIA 145
+E+ +R E + + V E G V+ N E+KGK +I+A
Sbjct: 181 IAEILRREIEKRENIKAYLRTSAVGIFQDGEEKLVIG-----VRKENELIEFKGKAVIVA 235
Query: 146 VGAEPRKL-----HVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHS 200
GA + + +PG G G + G++ ++VG GN L A L
Sbjct: 236 TGAMEKTIPFENNDLPG---IYGAGAIQTLMNTYGIKPGEKALIVGAGNVGLILAYQLLQ 292
Query: 201 IGVKV-TLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVK---- 255
V+V +V K + ++++ G+P + + + G KVE ++ +
Sbjct: 293 ANVQVQAIVEAMPKIGGYFVHAAKVRRLGVPILTRHTILKAEGEEKVERAIVAEIDENWN 352
Query: 256 ----TGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEY-----GYIKV-DMYMRTKVPGI 305
T + F+ VD + I +G P + ++ G +Y G++ V D +M T V GI
Sbjct: 353 PIPGTEKIFD--VDLIAIAVGLRPSIELLQQAGCQIKYVRELGGHVPVRDRWMETTVKGI 410
Query: 306 FAAGDITNVFKQIAVAVGQGAIAANSA 332
F AGD + ++ A+ +G IA +A
Sbjct: 411 FVAGDTAGI-EEATTAMLEGKIAGLAA 436
>pir||A70477 glutamate synthase small subunit gltD - Aquifex aeolicus
>gi|2984275|gb|AAC07800.1| (AE000770) glutamate synthase
small subunit gltD [Aquifex aeolicus]
Length = 476
Score = 78.4 bits (190), Expect = 1e-13
Identities = 91/346 (26%), Positives = 140/346 (40%), Gaps = 73/346 (21%)
Query: 35 VIIIGAGPAGYTAAIYAARFGLDTII--ITKDLGGNMAITDLIENYPGFPEGISGSELAK 92
V +IGAGPAG + A A+ G + + GG M GI + L K
Sbjct: 156 VAVIGAGPAGLSCAHELAKKGHEVHVYEALPKPGGVMYY------------GIPNARLDK 203
Query: 93 RMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIAVGAEPRK 152
+ E EV R++ ++ G + T K + IAVGA K
Sbjct: 204 SIIEW-----------EVKRLEKLGIKFFYGYLIGKNITLQELREKYDAVFIAVGAGRGK 252
Query: 153 LHVPGE--------------------KEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTAL 192
L +PG+ EF +GV P+ +GK +++GGG TA+
Sbjct: 253 LGLPGDHLKGVYSAIDFLMRVNLYKANEFPKKGV--------PVELGKRTVIIGGGFTAV 304
Query: 193 QEALYLHSIGVKVTLVHRRDKFRADKILQ--DRLKQAGIPTILNTVVTEIRGTNKVESVV 250
A+ + +GV+ +V+RR + + + D L + G+ T E+ G K E V
Sbjct: 305 DCAITANRLGVETHVVYRRTRETSSARQEEWDHLMEEGVKIHWLTQPVEVIGNEKGEVVG 364
Query: 251 LKNVK--TGETFEK---------------KVDGVFIFIGYEPKTDFVKHLGI-TDEYGYI 292
LK +K GE E + D V IG + GI T ++G I
Sbjct: 365 LKCIKMELGEPDESGRPRPVPVPNSEHIIECDSVIFAIGQRANPIAYEGSGIKTTKWGTI 424
Query: 293 KVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFIES 338
+V+ T + G+FA GD+ N ++ VA+ G AA E++ S
Sbjct: 425 EVNERYETNLEGVFAGGDVINGGDRVVVALAHGKEAAKYIHEYLMS 470
>sp|P47513|DLDH_MYCGE DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONENT OF PYRUVATE COMPLEX)
>gi|1361484|pir||I64229 dihydrolipoamide dehydrogenase
(EC 1.8.1.4) pdhD - Mycoplasma genitalium
>gi|1045965|gb|AAC71493.1| (U39706) dihydrolipoamide
dehydrogenase (pdhD) [Mycoplasma genitalium]
Length = 457
Score = 77.3 bits (187), Expect = 3e-13
Identities = 85/330 (25%), Positives = 140/330 (41%), Gaps = 41/330 (12%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMA----------------ITDLIE 76
+D+II+GAGPAGY AA YA + L T++I K G + I D +
Sbjct: 3 YDLIILGAGPAGYIAAEYAGKHKLKTLVIEKQYFGGVCLNVGCIPTKTLLKRAKIIDYLV 62
Query: 77 NYPGFPEGISGSELAKRMYEHVKKYGVDVIFDEVVR-----IDPAECAYYEGPCQFEVKT 131
+ + GI+ + AK ++ + K +V+ D++V I A+ EG K
Sbjct: 63 HAKDY--GITINGQAKLDWKQLLKQKQEVV-DKLVAGVKTIIKGAKVESIEGEATVIDKN 119
Query: 132 ---ANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPL-FVGKEVIVVGG 187
N Y II+A G+ PR L +PG ++ G +T L V K+ +VVGG
Sbjct: 120 KVQVNNTTYTTNNIIVATGSRPRYLTLPGFEKAQQAGFIIDSTQALALEGVPKKFVVVGG 179
Query: 188 GNTALQEALYLHSIGVKVTLVHRRDKF------RADKILQDRLKQAGIPTILNTVVTEIR 241
G ++ A S+G +VT++ D+ +++ LK G+ I N V +R
Sbjct: 180 GVIGVEFAFLFASLGSEVTIIQGVDRILEVCDSDVSELISKTLKNKGVQIITNAHV--VR 237
Query: 242 GTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGI-TDEYGYIKVDMYMRT 300
N + V+ +K + + IG T+ + L + D I ++ ++T
Sbjct: 238 AENNQLFYTVNGVEQSVIGDK----ILVSIGRIANTECLDQLDLKRDHNNKIVLNEKLQT 293
Query: 301 KVPGIFAAGDITNVFKQIAVAVGQGAIAAN 330
I+ GD+ A QG A +
Sbjct: 294 STTNIYLIGDVNTQMMLAHYAYQQGRYAVD 323
>gi|6321091 dihydrolipoamide dehydrogenase precursor (mature protein is the E3
component of alpha-ketoacid dehydrogenase complexes);
Lpd1p [Saccharomyces cerevisiae]
>gi|118678|sp|P09624|DLDH_YEAST DIHYDROLIPOAMIDE
DEHYDROGENASE, MITOCHONDRIAL PRECURSOR
>gi|82983|pir||A30151 dihydrolipoamide dehydrogenase (EC
1.8.1.4) precursor - yeast (Saccharomyces cerevisiae)
>gi|171390|gb|AAA34565.1| (J03645) dihydrolipoamide
dehydrogenase [Saccharomyces cerevisiae]
>gi|171848|gb|AAB63974.1| (M20880) lipoamide
dehydrongenase [Saccharomyces cerevisiae]
>gi|559939|emb|CAA86354.1| (Z46255) lpd1, dhlp1, len:
499. CAI: 0.26, DLDH_YEAST P09624 DIHYDROLIPOAMIDE
DEHYDROGENASE PRECURSOR [Saccharomyces cerevisiae]
>gi|836736|dbj|BAA09220.1| (D50617) dihydrolipoamide
dehydrogenase precursor [Saccharomyces cerevisiae]
>gi|1100786|dbj|BAA07999.1| (D44596) lipoamide
dehydrogenase [Saccharomyces cerevisiae]
Length = 499
Score = 76.9 bits (186), Expect = 3e-13
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 68/338 (20%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK--DLGGNMAITDLIENYPGFPEGISG 87
+K DV+IIG GPAGY AAI AA+ G +T + K LGG I + ++
Sbjct: 24 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPS----KALLNN 79
Query: 88 SELAKRMYEHVKKYGVDVIFDEVVRI-------DPA---------------ECAYYEGPC 125
S L +M+ +K G+DV D + + D A + YY+G
Sbjct: 80 SHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNG 139
Query: 126 QFEVKT------ANGKE--------YKGKTIIIAVGAEPRK---LHVPGEKEFTGRGVSY 168
FE +T +G E K II+A G+E + + EK + G
Sbjct: 140 SFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSSTGALS 199
Query: 169 CATCDGPLFVGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRAD------KILQD 222
+ K + ++GGG L+ +G KVT+V + + A K Q
Sbjct: 200 LKE------IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQK 253
Query: 223 RLKQAGIPTILNT-VVTEIRGTNK-VESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFV 280
LK+ G+ L+T V++ R +K V +V+++ KT + + + + + +G P ++
Sbjct: 254 FLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRP---YI 310
Query: 281 KHLGI------TDEYGYIKVDMYMRTKVPGIFAAGDIT 312
LG D+ G + +D +K P I GD+T
Sbjct: 311 AGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVT 348
>sp|Q43154|GSHC_SPIOL GLUTATHIONE REDUCTASE, CHLOROPLAST PRECURSOR (GR) (GRASE)
>gi|7431850|pir||T09151 glutathione reductase (NADPH)
(EC 1.6.4.2) - spinach (fragment)
>gi|529375|dbj|BAA07108.1| (D37870) Glutathione
Reductase precursor [Spinacia oleracea]
Length = 489
Score = 76.9 bits (186), Expect = 3e-13
Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 67/350 (19%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTII-------ITKDLGGNMAITDLIENYPGFPEGI 85
+D+ +IGAG G AA ++A G I I+ ++ G + T +I +
Sbjct: 16 FDLFVIGAGSGGVRAARFSANLGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 75
Query: 86 SGSELAKRMYEHVKKYGVDVI--------------FDEVVRIDP--------AECAYYEG 123
G+ + E K YG ++ DE++R++ A YEG
Sbjct: 76 YGASFGGEL-EDAKNYGWELNEKIDFNWKKLLQKKTDEIIRLNNIYKRLLSNAGVKLYEG 134
Query: 124 ------PCQFEVKTANGKE--YKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGP 175
P + +V +G + Y K I+IA G+ ++ ++PG++ T D
Sbjct: 135 EGKIVGPNEVQVTQLDGTKLSYSAKHILIATGSRAQRPNIPGQE--------LAITSDEA 186
Query: 176 LFVG---KEVIVVGGGNTALQEALYLHSIGVKVTLVHRR--------DKFRADKILQDRL 224
L + K V+++GGG +++ A +G V L R+ D+ RA + L
Sbjct: 187 LSLEEFPKRVVILGGGYISVEFASIWRGMGADVNLCFRKELPLRGFDDEMRA--AVARNL 244
Query: 225 KQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFV--KH 282
+ G+ T +TE+ K + V+ GE E D V G P T + +
Sbjct: 245 EGRGVNVHPRTTLTELV---KTDGGVVARTDHGEEIE--ADVVLFATGRSPNTKRLNLEA 299
Query: 283 LGIT-DEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANS 331
LG+ D G +KVD Y RT VP I+A GD+TN VA+ +G A +
Sbjct: 300 LGVELDRTGAVKVDEYSRTSVPSIWAIGDVTNRMNLTPVALMEGTCFAKT 349
>pir||G71641 dihydrolipoamide dehydrogenase (pdhD) RP805 - Rickettsia prowazekii
>gi|3861332|emb|CAA15231.1| (AJ235273) DIHYDROLIPOAMIDE
DEHYDROGENASE (pdhD) [Rickettsia prowazekii]
Length = 459
Score = 75.7 bits (183), Expect = 7e-13
Identities = 85/339 (25%), Positives = 143/339 (42%), Gaps = 56/339 (16%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFP-EGISGSELA 91
+DV +IG GP GY AAI AA+ ++I K G + + N+ P + + S
Sbjct: 4 YDVAVIGGGPGGYVAAIRAAQLKKKVVLIEKAHLGGVCL-----NWGCIPTKSLLKSAEV 58
Query: 92 KRMYEHVKKYGVDVIFDEV---------------------VRIDPAECAYYEGPCQF--- 127
+H + YG+DV E+ + + + +G F
Sbjct: 59 FEYIKHAQDYGIDVGIAEINIKKIVERSRKIANTLACGVQLLLKKNKVTIIDGVASFGEN 118
Query: 128 EVKTANGKE-YKGKTIIIAVGAEPRKLH--VPGEKE-FTGRGVSYCATCDGPLFVGKEVI 183
+V N K K + IIIA G P+ L P K+ +T + P V K +I
Sbjct: 119 KVINVNDKPTVKAENIIIATGTRPKILQGFEPDIKQIWTSKEAMI------PQHVPKSMI 172
Query: 184 VVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADK------ILQDRLKQAGIPTILNTVV 237
++G G ++ A + +SIGV VT++ +++ + I +Q GI I N +
Sbjct: 173 IIGSGAIGIEFASFYNSIGVDVTVIEAKNRILPSEDTEIAGIAHKNFEQKGIKIITNAKL 232
Query: 238 TEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITD-----EYGYI 292
I+ T + ++ G+T + + + + +G +++LG+ E GYI
Sbjct: 233 --IKQTKSQNEIEVELELEGKTQKLQATILLMAVGISAN---IENLGLEKTKVEVENGYI 287
Query: 293 KVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANS 331
+ M+T GI+A GD+ V A +G IAA S
Sbjct: 288 LTNGLMQTAESGIYAIGDVAGVPCLAHKASHEGIIAAES 326
>sp|P06715|GSHR_ECOLI GLUTATHIONE REDUCTASE (GR) (GRASE) >gi|66121|pir||RDECU glutathione
reductase (NADPH) (EC 1.6.4.2) - Escherichia coli
>gi|809419|pdb|1GER|B Chain B, Glutathione Reductase
(E.C.1.6.4.2) Complexed With Fad >gi|809423|pdb|1GET|B
Chain B, Glutathione Reductase (E.C.1.6.4.2) Wild-Type
Complexed With Nadp And Fad >gi|809418|pdb|1GER|A Chain
A, Glutathione Reductase (E.C.1.6.4.2) Complexed With
Fad >gi|809422|pdb|1GET|A Chain A, Glutathione Reductase
(E.C.1.6.4.2) Wild-Type Complexed With Nadp And Fad
>gi|146248|gb|AAA23926.1| (M13141) glutathione reductase
(EC 1.6.4.2) [Escherichia coli]
>gi|466637|gb|AAB18476.1| (U00039) glutathione
oxidoreductase [Escherichia coli]
>gi|1789915|gb|AAC76525.1| (AE000426) glutathione
oxidoreductase [Escherichia coli K12]
Length = 450
Score = 75.7 bits (183), Expect = 7e-13
Identities = 93/339 (27%), Positives = 140/339 (40%), Gaps = 65/339 (19%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENYPGFPEGISGS 88
+K +D I IG G G + AA +G +I K+LGG N P+ +
Sbjct: 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCV------NVGCVPKKVMWH 55
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVR--------------IDPAECAY-----------YEG 123
A ++ E + YG D FD + ID +Y +G
Sbjct: 56 --AAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG 113
Query: 124 PCQF-EVKT--ANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVG- 179
+F + KT NG+ I+IA G P +PG V Y DG +
Sbjct: 114 FARFVDAKTLEVNGETITADHILIATGGRPSHPDIPG--------VEYGIDSDGFFALPA 165
Query: 180 --KEVIVVGGGNTALQEALYLHSIGVKVTL-VHRRDKFRA-DKILQDRLKQAGIPTILNT 235
+ V VVG G A++ A ++ +G K L V + R+ D ++ + L + ++N
Sbjct: 166 LPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVE-----VMNA 220
Query: 236 VVTEIRGTNKVESVVLKNVKTGETFE------KKVDGVFIFIGYEPKTDFV--KHLGI-T 286
++ TN + V+KN T E + VD + IG EP D + + G+ T
Sbjct: 221 EGPQLH-TNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKT 279
Query: 287 DEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQG 325
+E GYI VD Y T + GI+A GD T + VAV G
Sbjct: 280 NEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAG 318
>pir||A82353 glutathione reductase VC0186 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9654591|gb|AAF93362.1| (AE004109)
glutathione reductase [Vibrio cholerae]
Length = 454
Score = 75.3 bits (182), Expect = 1e-12
Identities = 86/319 (26%), Positives = 144/319 (44%), Gaps = 59/319 (18%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENYPGFPEGIS--GSE 89
+D + IG G G +A AA +G +I KDLGG N P+ + G++
Sbjct: 9 FDYLCIGGGSGGIASANRAAMYGAKVALIEAKDLGGTCV------NVGCVPKKVMWHGAQ 62
Query: 90 LAKRMYEHVKKYGVDVIFDEV--VRIDPAECAYY-------------------EGPCQF- 127
+A+ M+ + + YG DV ++ + AY +G +F
Sbjct: 63 IAEAMHLYAEDYGFDVDVKNFNWAKLVESRQAYIGRIHQSYDRVLGNNKVHVIKGFAKFV 122
Query: 128 EVKTA--NGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVV 185
+ KT NG+ Y I+IAVG P ++PG E+ + + P K V V+
Sbjct: 123 DAKTVEVNGELYTADHILIAVGGRPSIPNIPGA-EYGIDSNGFFELSEQP----KRVAVI 177
Query: 186 GGGNTALQEALYLHSIGVKVTLVHRRDK-FRA-DKILQDRLKQAGIPTILNTVVTEIRGT 243
G G A++ A L+++G + L R++ R+ D ++ + L + ++N+ ++ T
Sbjct: 178 GAGYIAVEIAGVLNALGTETHLFCRKESPLRSFDPMIIETLVE-----VMNSEGPQLH-T 231
Query: 244 NKVESVVLK--------NVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGI---TDEYGYI 292
+ V V+K +++ G+T+ VD + IG P TD + T+E GYI
Sbjct: 232 HSVPKQVVKEADGSLTLHLENGQTYN--VDTLIWAIGRHPATDAINLAATGVATNEQGYI 289
Query: 293 KVDMYMRTKVPGIFAAGDI 311
KVD + T V GI+ GDI
Sbjct: 290 KVDEFQNTNVAGIYCVGDI 308
>emb|CAC11354.1| (AL445063) dihydrolipoamide dehydrogenase component (E3) related
protein [Thermoplasma acidophilum]
Length = 451
Score = 74.5 bits (180), Expect = 2e-12
Identities = 86/328 (26%), Positives = 138/328 (41%), Gaps = 37/328 (11%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSELAK 92
+DVI IGAG A Y AA R G ++I K G M+ L E I
Sbjct: 4 YDVITIGAGGAAYPAAFRLKRSGFSVLMIDKK--GVMSGNCLAEGCVPSKAVIETVHNLA 61
Query: 93 RMYEHVKKYGVDVIFDEVV-RIDPAECAYYEGPCQFEVKTANGKEYKG------------ 139
+M H Y +D + ++V D + YE Q E+K A K KG
Sbjct: 62 KM-RHFGDYSID--YSKIVDHKDSVQNIRYEQHDQ-ELKEAGLKIIKGTARIIDDNTVEV 117
Query: 140 ------------KTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGG 187
IIIA G+E +PG E + + K + ++GG
Sbjct: 118 SSDTGTSRYRSSSAIIIASGSETFVPKIPGA-ELAWTSADLYSLKPKVKKLPKSIAIIGG 176
Query: 188 GNTALQEALYLHSIGVKVTLVHRRDKFRA--DKILQDRLKQAGIPTILNTVVTEIRGTNK 245
G ++ A ++ +GVKVT++ D+ + D+ + D+L +P + + ++ +
Sbjct: 177 GYIGMETASFMSILGVKVTVIEMLDRVMSTMDEAMVDKLLPL-LPKMDIRTASPVQSIER 235
Query: 246 VESVVLKNV-KTGETFEKKVDGVFIFIGYEPK-TDFVKHLGITDEYGYIKVDMYMRTKVP 303
S+ N K GE +V+ V + +G P + + LGI + IKV+M M+T +
Sbjct: 236 NGSMYHVNFGKEGEKESIEVEAVLMAVGRVPVFPEGIDDLGIEHDRHGIKVNMAMQTNIK 295
Query: 304 GIFAAGDITNVFKQIAVAVGQGAIAANS 331
I+A GD+ + A Q +AAN+
Sbjct: 296 NIYATGDVNGITPLFHAAKRQSLVAANN 323
>gb|AAG20413.1| (AE005114) thioredoxin reductase; TxrB3 [Halobacterium sp. NRC-1]
Length = 294
Score = 74.5 bits (180), Expect = 2e-12
Identities = 41/114 (35%), Positives = 62/114 (53%), Gaps = 9/114 (7%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAI--TDLIENYPGFPEGISGSELA 91
DV+I+G GPAG A ++ AR+GLDT++ + GN A+ +ENYPGFP GI L
Sbjct: 10 DVVIVGGGPAGCAAGVFTARYGLDTVVFDR---GNAALPRCAFVENYPGFPGGIDVPTLR 66
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIIIA 145
++H + G D+I D V +D + F V+T +G+ T++ A
Sbjct: 67 GLFHDHAETAGCDLIADTVESVDRPS----DDDTGFVVETQDGRRVYTDTVLAA 116
>gb|AAK42805.1| Mercuric reductase (Hg(II) reductase) (merA) [Sulfolobus
solfataricus]
Length = 453
Score = 74.1 bits (179), Expect = 2e-12
Identities = 85/328 (25%), Positives = 138/328 (41%), Gaps = 42/328 (12%)
Query: 34 DVIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIE-----------NYPG- 80
D++IIG G AG+ A I A G+ +++ ++GG + NY
Sbjct: 3 DLVIIGYGAAGFAALIRANELGIKPVVVGYGEIGGTCVNVGCVPSKRMLRIGELYNYSSK 62
Query: 81 ------FPEGISGSELAKRMYEHVKKYGV-DVIFDEVVRIDPAECAYYEGPCQFEVKTAN 133
FPE + + ++K DVI +++ + AY+ P +V N
Sbjct: 63 VIGKKLFPEFFQAFQDKAEIVNSLRKEKYEDVINSYDIKLKIGK-AYFTSPNAVKV---N 118
Query: 134 GKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQ 193
G+ + K IIA G+ P ++P K T G P + ++GG AL+
Sbjct: 119 GEIIEAKKFIIATGSSP---NIPNIKGLTEVGFWTNVEALSPDKTISSLAIIGGRALALE 175
Query: 194 EALYLHSIGVKVTLVHRRDKFRADKILQDRL-------KQAGIPTILNTVVTEIRGTNKV 246
A +GV T++ R + D + L + IP N V E+R N
Sbjct: 176 FAQMYKRLGVDTTILQRSGRILPDWEPEISLSVKNYLEENDSIPIFTNVRVKEVRKGNGG 235
Query: 247 ESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDF-VKHLGIT-DEYGYIKVDMYMRTKVPG 304
+ +V + E + D + + G +P D + GI ++ G IKV+ +RT P
Sbjct: 236 KIIVT------DKGEVEADEILLATGRKPNVDLNLDAAGIELNDKGGIKVNEELRTSNPN 289
Query: 305 IFAAGDITNVFKQIAVAVGQGAIAANSA 332
+FAAGD+ A+A QG+IAA +A
Sbjct: 290 VFAAGDVIGGPMLEALAGRQGSIAAENA 317
>sp|O50311|DLDH_CHLVI DIHYDROLIPOAMIDE DEHYDROGENASE (E3 COMPONENT OF PYRUVATE AND
2-OXOGLUTARATE DEHYDROGENASES COMPLEXES)
>gi|7469227|pir||T17191 dihydrolipoamide dehydrogenase
(EC 1.8.1.4) - Chlorobium vibrioforme
>gi|2661853|emb|CAB06298.1| (Z83933) dehydrolipoamide
dehydrogenase [Chlorobium vibrioforme]
Length = 469
Score = 74.1 bits (179), Expect = 2e-12
Identities = 97/353 (27%), Positives = 143/353 (40%), Gaps = 73/353 (20%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGG---------------NMAITD 73
S +DV +IG+GP GY AA++AAR G+ ++ K LGG + + D
Sbjct: 8 SAQFDVAVIGSGPGGYEAALHAARHGMKVCLVEKRSLGGVCVNWGCIPTKALLRSAEVYD 67
Query: 74 LIENYPGFPEGISGSELAKRMYEHVKK---------YGVDVIFDEV-VRIDPAECAYYEG 123
L +N F G++ SEL+ + + VK+ GV+ + + V + E A G
Sbjct: 68 LAKNPSEF--GVNVSELSFDLAQAVKRSRKVSLKSSKGVEFMLKKAKVEVWRGE-AVLTG 124
Query: 124 PCQFEVKTANGKE--YKGKTIIIAVGAEPR---KLHVPGEKEFTGRGVSYCATCDGPLFV 178
+V +G E + II+A GA+PR L G+K T R V
Sbjct: 125 SKGVKVTAEDGSERSLEAANIIVATGAQPRVIPGLEPDGKKIITSREALILKD------V 178
Query: 179 GKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVT 238
+ +IVVGGG ++ A + G KVT+V L RL A + +
Sbjct: 179 PESMIVVGGGAIGVEMAWFYAKAGAKVTIVE----------LMPRLLPAEEAEVSEALK- 227
Query: 239 EIRGTNKVESVVLKNVKTGET--FEKKVDGVFIFIGYEPK-------------TDFVKHL 283
R KV+ V K G E V+ + G EP+ T + L
Sbjct: 228 --RSFEKVDITVQCGAKLGNVAISEFGVNADLLAEGKEPQKIEASCMLVAVGVTGVIDGL 285
Query: 284 -----GITDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANS 331
GI E G+I+ D RT GI+A GD+ A + AIA +
Sbjct: 286 GLDAAGIETERGFIRTDELCRTSASGIYAIGDVRGGMLLAHKASAEAAIAVEA 338
>emb|CAA70224.1| (Y09024) mercuric reductase [Bacillus cereus]
Length = 546
Score = 74.1 bits (179), Expect = 2e-12
Identities = 86/337 (25%), Positives = 140/337 (41%), Gaps = 49/337 (14%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKD-LGGNMA---------------ITDLIE 76
+D IIIG+G A +++AI A ++G +I + +GG I L +
Sbjct: 85 YDYIIIGSGGAAFSSAIEAVKYGAKVAMIERGTIGGTCVNIGCVPSKTLLRAGEINHLAK 144
Query: 77 NYPGFPEGISGSE-----LAKRMYEHV-----KKYGVDVIFDEVVRIDPAECAYYEGPCQ 126
N P S E L K+ E V KY VD+I D + E + +
Sbjct: 145 NNPFVGLHTSAGEVDLAPLIKQKNELVTELRNSKY-VDLIDDYGFELIEGEAKFVDE--- 200
Query: 127 FEVKTANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLF--VGKEVIV 184
+ NG K +IA GA P K ++PG E V Y + V K ++V
Sbjct: 201 -KTVEVNGAPISAKRFLIATGASPAKPNIPGLNE-----VDYLTSTSLLELKKVPKRLVV 254
Query: 185 VGGGNTALQEALYLHSIGVKVTLVHRRDKFRAD------KILQDRLKQAGIPTILNTVVT 238
+G G ++ H++G +VTL+ R ++ + + ++ L + GI +
Sbjct: 255 IGSGYIGMELGQLFHNLGSEVTLIQRSERLLKEYDPEISESVEKSLVEQGINLVKGATYE 314
Query: 239 EIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGITDEYGY---IKVD 295
I ++ V ++ G+ + D + + G P T + E G I +D
Sbjct: 315 RIEQNGDIKKVHVE--VNGKKRIIEADQLLVATGRTPNTATLNLRAAGVEIGSRGEIIID 372
Query: 296 MYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSA 332
Y RT I+AAGD+T + + VA QG +AA +A
Sbjct: 373 DYSRTTNTRIYAAGDVTLGPQFVYVAAYQGGVAAPNA 409
>pdb|1GES|B Chain B, Glutathione Reductase (E.C.1.6.4.2) Nad Mutant With Ala
179 Replaced By Gly, Ala 183 By Gly, Val 197 By Glu, Arg
198 By Met, Lys 199 By Phe, His 200 By Asp, And Arg 204
By Phe (A179g,A183g,V197e,R198m,K199f,H200d,R204p)
Complexed With Nad >gi|809425|pdb|1GEU|B Chain B,
Glutathione Reductase (E.C.1.6.4.2) Nad Mutant With Ala
179 Replaced By Gly, Ala 183 By Gly, Val 197 By Glu, Arg
198 By Met, Lys 199 By Phe, His 200 By Asp, And Arg 204
By Phe (A179g,A183g,V197e,R198m,K199f,H200d,R204p)
Complexed With Nad And > >gi|809420|pdb|1GES|A Chain A,
Glutathione Reductase (E.C.1.6.4.2) Nad Mutant With Ala
179 Replaced By Gly, Ala 183 By Gly, Val 197 By Glu, Arg
198 By Met, Lys 199 By Phe, His 200 By Asp, And Arg 204
By Phe (A179g,A183g,V197e,R198m,K199f,H200d,R204p)
Complexed With Nad >gi|809424|pdb|1GEU|A Chain A,
Glutathione Reductase (E.C.1.6.4.2) Nad Mutant With Ala
179 Replaced By Gly, Ala 183 By Gly, Val 197 By Glu, Arg
198 By Met, Lys 199 By Phe, His 200 By Asp, And Arg 204
By Phe (A179g,A183g,V197e,R198m,K199f,H200d,R204p)
Complexed With Nad And >
Length = 450
Score = 73.4 bits (177), Expect = 4e-12
Identities = 90/337 (26%), Positives = 134/337 (39%), Gaps = 61/337 (18%)
Query: 30 SKVWDVIIIGAGPAGYTAAIYAARFGLDTIII-TKDLGGNMAITDLIENYPGFPEGISGS 88
+K +D I IG G G + AA +G +I K+LGG N P+ +
Sbjct: 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCV------NVGCVPKKVMWH 55
Query: 89 ELAKRMYEHVKKYGVDVIFDEVVR--------------IDPAECAY-----------YEG 123
A ++ E + YG D FD + ID +Y +G
Sbjct: 56 --AAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG 113
Query: 124 PCQF-EVKT--ANGKEYKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLFVG- 179
+F + KT NG+ I+IA G P +PG V Y DG +
Sbjct: 114 FARFVDAKTLEVNGETITADHILIATGGRPSHPDIPG--------VEYGIDSDGFFALPA 165
Query: 180 --KEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVV 237
+ V VVG G ++ ++ +G K H + F A D + + ++N
Sbjct: 166 LPERVAVVGAGYIGVELGGVINGLGAKT---HLFEMFDAPLPSFDPMISETLVEVMNAEG 222
Query: 238 TEIRGTNKVESVVLKNVKTGETFE------KKVDGVFIFIGYEPKTDFV--KHLGI-TDE 288
++ TN + V+KN T E + VD + IG EP D + + G+ T+E
Sbjct: 223 PQLH-TNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNE 281
Query: 289 YGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQG 325
GYI VD Y T + GI+A GD T + VAV G
Sbjct: 282 KGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAG 318
>sp|P48639|GSHR_BURCE GLUTATHIONE REDUCTASE (GR) (GRASE) >gi|2120650|pir||I40178 probable
glutathione reductase (NADPH) (EC 1.6.4.2) - Pseudomonas
cepacia >gi|643637|gb|AAC43334.1| (U19883) glutathione
reductase [Burkholderia cepacia]
Length = 449
Score = 72.6 bits (175), Expect = 6e-12
Identities = 91/346 (26%), Positives = 132/346 (37%), Gaps = 75/346 (21%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITK-DLGGNMAITDLIENYPGFPEGISGSELA 91
+D+ +IGAG G AA AA G I + GG I +
Sbjct: 6 FDLFVIGAGSGGVRAARIAAGHGAKVAIAEEYRFGGTCVIRGCVP--------------- 50
Query: 92 KRMYEHVKKYG---------------VDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKE 136
K++ + +YG + ++ AE A EG Q ++ AN +
Sbjct: 51 KKLLMYASQYGQGFEDAAGFGWHSAATSHSWTSLIAAKDAEIARLEGVYQRLIENANVEI 110
Query: 137 YKGK-------------------TIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPLF 177
+KG+ TI+IA GA P V G + P
Sbjct: 111 FKGRAQIAGPNRVTVTGASVSARTILIATGARPVMPPVAGANLMITSDDVFDLPVGPP-- 168
Query: 178 VGKEVIVVGGGNTALQEALYLHSIGVKVTLVHRRDKFRA---DKI---LQDRLKQAGIPT 231
+ ++GGG A + A + +G V +HR + D++ L D LK++GI
Sbjct: 169 ---RIAIIGGGYIACEFAGIFNGLGRHVVQLHRGSQVLRGFDDELREHLGDELKKSGIDL 225
Query: 232 ILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGIT----- 286
L V + SV L TG+ E VD V G P T LG+
Sbjct: 226 RLGVDVVAVERQRGALSVQLT---TGDAME--VDAVMAATGRLPNT---WGLGLETVDVG 277
Query: 287 -DEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANS 331
D+ G IKVD Y RT PGI+A GD+TN VA+ +G A++
Sbjct: 278 LDQNGAIKVDEYSRTSSPGIYAVGDVTNRLNLTPVAIHEGHAFADT 323
>emb|CAC13956.1| (AJ400816) glutathione reductase [Mesembryanthemum crystallinum]
Length = 461
Score = 70.6 bits (170), Expect = 2e-11
Identities = 91/349 (26%), Positives = 141/349 (40%), Gaps = 65/349 (18%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTII-----------ITKDLGGNMAITDLI-ENYPG 80
+D+ +IGAG G AA ++A+FG I + +GG I + +
Sbjct: 16 FDLFVIGAGSGGVRAARFSAKFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 75
Query: 81 FPEGISGSELAKRMYEHVKKYGVDVIF--------DEVVRIDP--------AECAYYEG- 123
+ SG R Y +D + DE++R++ A YEG
Sbjct: 76 YGASFSGELQDARNYGWELNENIDFNWKKLLQKKTDEILRLNNIYKRLLSNAGVKLYEGE 135
Query: 124 -----PCQFEVKTANGKE--YKGKTIIIAVGAEPRKLHVPGEKEFTGRGVSYCATCDGPL 176
P + +V +G + Y K I+IA G+ ++ + RG T D L
Sbjct: 136 GKIVSPNEVQVTQLDGTKLSYSAKHILIATGSRAQRPDI--------RGQELAITSDEAL 187
Query: 177 FVG---KEVIVVGGGNTALQEALYLHSIGVKVTLVHRR--------DKFRADKILQDRLK 225
+ K +++GGG A++ A +G V L RR D+ RA + L+
Sbjct: 188 SLEELPKRAVILGGGYIAVEFASIWRGMGATVDLFFRRELPLRGFDDEMRA--VAARNLE 245
Query: 226 QAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVK--HL 283
G+ T +TE+ T+ V +T E D V G P T + +
Sbjct: 246 GRGVNMHPRTNLTELVKTDGGIKV-----RTDHGEELMADVVLFATGRSPNTKRLNLDAV 300
Query: 284 GIT-DEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANS 331
G+ D+ G IKVD Y +T VP I+A GD+TN VA+ +G A S
Sbjct: 301 GVNVDKTGAIKVDDYSQTSVPSIWAIGDVTNRMNLTPVALMEGTCFAKS 349
>dbj|BAA22375.1| (D86491) Nfrl [Xenopus laevis]
Length = 598
Score = 70.2 bits (169), Expect = 3e-11
Identities = 78/304 (25%), Positives = 131/304 (42%), Gaps = 53/304 (17%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGS--- 88
+ +++IIGAGPAG A + G I+ M ++ +N P +S S
Sbjct: 194 ITNILIIGAGPAGLVCAETLRQEGFSDRIV-------MCTSE--KNLPYDRSKLSKSMDS 244
Query: 89 ---ELAKRMYEHVKKYGVDVIFD-EVVRIDPAECAYYEGPCQFEVKTANGKEYKGKTIII 144
++ R E Y ++V+ + +VV +D V +G + ++I
Sbjct: 245 QAEQIFLRSKEFFHTYDIEVLTETQVVSVDTKNKI---------VMFKDGFRMEYNKLLI 295
Query: 145 AVGAEPRKLHVPGEKEFTGRGVSYCATCDGP--------LFVGKEVIVVGGGNTALQEAL 196
A G+ P+ L G++ + T P L K ++VG ++ A
Sbjct: 296 ATGSTPKTLTCKGKE------LDNVITIRTPEDANKVVRLASSKNAVIVGASFLGMEVAA 349
Query: 197 YLHSIGVKVTLVHRRD----KFRADKI---LQDRLKQAGIPTILNTVVTEIRGTN-KVES 248
YL V++V + KF +K+ + + + + T V+E+R K++
Sbjct: 350 YLCEKAHSVSVVELENIPFKKFLGEKVGLAIMKMFENNRVKFYMQTEVSELREQEGKLKE 409
Query: 249 VVLKNVKTGETFEKKVDGVFIFIGYEPKTDFVKHLGIT-DEYGYIKVDMYMRTKVPGIFA 307
VVLK+ K + D I IG P T F+K G+ D GYI V+ M+T +PG+FA
Sbjct: 410 VVLKSGKV-----LRADVCVIGIGASPTTGFLKQSGVALDSRGYIPVNKMMQTNIPGVFA 464
Query: 308 AGDI 311
AGD+
Sbjct: 465 AGDV 468
>gb|AAD12483.1| (U02197) Homology to thioredoxin reductase M60116 [Mycoplasma
genitalium]
Length = 107
Score = 68.7 bits (165), Expect = 1e-10
Identities = 34/83 (40%), Positives = 54/83 (64%), Gaps = 2/83 (2%)
Query: 33 WDVIIIGAGPAGYTAAIYAARFGLDTIIITKDL-GGNMAITDLIENYPGFPEGISGSELA 91
+D++I+GAGPAG +AIY R L+ II + GG + T+++ENYPGF + I+G EL
Sbjct: 1 YDLVIVGAGPAGIASAIYGKRANLNLAIIEGNTPGGKIVKTNIVENYPGF-KTITGPELG 59
Query: 92 KRMYEHVKKYGVDVIFDEVVRID 114
MY H+ + V ++ +++ID
Sbjct: 60 LEMYNHLLAFEPVVFYNNLIKID 82
>pir||S76954 probable thioredoxin reductase (NADPH) (EC 1.6.4.5) - Synechocystis
sp. (strain PCC 6803) >gi|1653956|dbj|BAA18866.1|
(D90917) hypothetical protein [Synechocystis sp.]
Length = 326
Score = 68.7 bits (165), Expect = 1e-10
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 24/308 (7%)
Query: 32 VWDVIIIGAGPAGYTAAIYAARFGLDTIIITKDLGGNMAITDLIENYPGFPEGISGSELA 91
V+D I++G G G +AAIY AR+GL +++ K G + + DL NY G G ++
Sbjct: 15 VYDAIVLGGGMGGLSAAIYLARYGLKCLVVEKGRGRSFWMQDL-RNYVGLDPDTPGRDII 73
Query: 92 KRMYEHVKKYGVDVIFDEVVRIDPAECAYYEGPCQFEVKTANGKE------YKGKTIIIA 145
+ +G D++ V E EG VK GK+ ++ K +I A
Sbjct: 74 THSTQQALHWGADLLRGYV------EDVTDEGD-TLAVKVKVGKKDSLYPIFRTKYVIAA 126
Query: 146 VGA---EPRKLHVPGEKEFTGRGVSYCATCDGPLFVGKEVIVVGGGNTALQEALYLHSIG 202
G P+ + ++ G + C CDG ++ +++ G + A L+
Sbjct: 127 TGIIDNLPQLEDMQNVYDYAGYTLHVCMICDGFDMWDQKAVLIAGTEGQINAAFVLNWFT 186
Query: 203 VKVTLVHRRDKFRADKILQDRLKQAGIPTILNTVVTEIRGTNKVESVVLKNVKTGETFEK 262
+T++ D+ ++ +L G P + +T+ G + S V + G E
Sbjct: 187 PYITVLTHGLCTVGDE-MKAKLADHGYP-LHEAAITKFLGEDHKMSGV--ELVDGTVVEA 242
Query: 263 KVDGVFIFIGYEPKTDFVKHL-GITDEYGYIKVDMYMRTKVPGIFAAGDITNVFKQIAVA 321
I +G ++K + G+ + + + +T P IFA GD+ Q++VA
Sbjct: 243 TTG--LINMGSVYHNHYLKGIEGLEWDGENLVTNDMAQTSHPRIFALGDLKKGLNQVSVA 300
Query: 322 VGQGAIAA 329
V G +AA
Sbjct: 301 VADGTLAA 308
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.405
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129838564
Number of Sequences: 2977
Number of extensions: 5651353
Number of successful extensions: 16660
Number of sequences better than 1.0e-10: 179
Number of HSP's better than 0.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 15869
Number of HSP's gapped (non-prelim): 236
length of query: 345
length of database: 189,106,746
effective HSP length: 55
effective length of query: 290
effective length of database: 156,189,961
effective search space: 45295088690
effective search space used: 45295088690
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)