BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0505 (PAB0505) DE:Hypothetical protein
(330 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75117 hypothetical protein PAB0505 - Pyrococcus abyssi (st... 663 0.0
pir||B71015 hypothetical protein PH1416 - Pyrococcus horikoshii ... 550 e-155
sp|Q58293|Y883_METJA HYPOTHETICAL PROTEIN MJ0883 >gi|2128555|pir... 270 2e-71
pir||F69117 conserved hypothetical protein MTH1873 - Methanobact... 237 1e-61
gi|11499555 conserved hypothetical protein [Archaeoglobus fulgid... 212 4e-54
gb|AAG19508.1| (AE005042) Vng1117c [Halobacterium sp. NRC-1] 188 7e-47
emb|CAC11965.1| (AL445065) conserved hypothetical protein [Therm... 173 2e-42
gi|11498311 conserved hypothetical protein [Archaeoglobus fulgid... 166 4e-40
sp|Q58952|YF57_METJA HYPOTHETICAL PROTEIN MJ1557 >gi|2128934|pir... 163 3e-39
pir||D71128 hypothetical protein PH0793 - Pyrococcus horikoshii ... 154 1e-36
pir||C69027 conserved hypothetical protein MTH1200 - Methanobact... 148 1e-34
pir||A72674 hypothetical protein APE0815 - Aeropyrum pernix (str... 146 2e-34
pir||F75198 hypothetical protein PAB2272 - Pyrococcus abyssi (st... 144 2e-33
gb|AAG20549.1| (AE005125) Vng2475c [Halobacterium sp. NRC-1] 143 3e-33
gb|AAK42582.1| Conserved hypothetical protein [Sulfolobus solfat... 141 1e-32
pir||D75035 met-10+ related protein. PAB1538 - Pyrococcus abyssi... 138 1e-31
pir||A71232 hypothetical protein PH0115 - Pyrococcus horikoshii ... 127 1e-28
dbj|BAA92631.1| (AB037814) KIAA1393 protein [Homo sapiens] 127 2e-28
emb|CAC12055.1| (AL445065) conserved hypothetical protein [Therm... 125 5e-28
gb|AAF47727.1| (AE003477) CG12032 gene product [Drosophila melan... 120 3e-26
pir||C72711 hypothetical protein APE1106 - Aeropyrum pernix (str... 118 1e-25
gi|6321861 Yhr070wp [Saccharomyces cerevisiae] >gi|731672|sp|P38... 111 9e-24
gb|AAK42392.1| Conserved hypothetical protein [Sulfolobus solfat... 108 1e-22
pir||JC4255 met-10+ protein - Neurospora crassa >gi|773387|gb|AA... 106 4e-22
pir||T47729 hypothetical protein F18O21.80 - Arabidopsis thalian... 106 5e-22
gb|AAD48952.1|AF149414_1 (AF149414) contains similarity to Pfam ... 99 5e-20
gb|AAF19556.1|AC005761_4 (AC005761) L952.4 [Leishmania major] >g... 90 3e-17
pir||T20173 hypothetical protein C53A5.2 - Caenorhabditis elegan... 89 7e-17
gi|8923676 hypothetical protein FLJ20772 [Homo sapiens] >gi|7021... 78 2e-13
>pir||D75117 hypothetical protein PAB0505 - Pyrococcus abyssi (strain Orsay)
>gi|5458164|emb|CAB49653.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 330
Score = 663 bits (1692), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MTLAVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAELEQVS 60
MTLAVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAELEQVS
Sbjct: 1 MTLAVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAELEQVS 60
Query: 61 RRPNSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAV 120
RRPNSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAV
Sbjct: 61 RRPNSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAV 120
Query: 121 YMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMA 180
YMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMA
Sbjct: 121 YMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMA 180
Query: 181 QEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVVPILGDSR 240
QEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVVPILGDSR
Sbjct: 181 QEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVVPILGDSR 240
Query: 241 EIEVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF 300
EIEVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF
Sbjct: 241 EIEVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF 300
Query: 301 GVKVEVLGKRVIRNYAPRQYNIAIDFRVSF 330
GVKVEVLGKRVIRNYAPRQYNIAIDFRVSF
Sbjct: 301 GVKVEVLGKRVIRNYAPRQYNIAIDFRVSF 330
>pir||B71015 hypothetical protein PH1416 - Pyrococcus horikoshii
>gi|3257839|dbj|BAA30522.1| (AP000006) 330aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 330
Score = 550 bits (1401), Expect = e-155
Identities = 260/330 (78%), Positives = 296/330 (88%)
Query: 1 MTLAVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAELEQVS 60
M LAVKV +KEGE VRR+LIELGAL+ YKIKRE FLLIPVKFPV+GFEVVE ELE+V
Sbjct: 1 MVLAVKVQIKEGEKVRRKLIELGALNREYKIKREEGFLLIPVKFPVEGFEVVEVELERVE 60
Query: 61 RRPNSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAV 120
RPNSY+++VN+P+ELR+FLP+SFDIIGNIAIIEIP EL+ Y+ EIG AI+ VHK+VKAV
Sbjct: 61 TRPNSYKDVVNIPRELRKFLPSSFDIIGNIAIIEIPSELQNYSNEIGGAIIRVHKSVKAV 120
Query: 121 YMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMA 180
YMKG +EGEYR R LIHIAGE ITETIHRENG+RLKLD+ KVYFSPRLATERMRVFKMA
Sbjct: 121 YMKGGSVEGEYRVRNLIHIAGEKITETIHRENGVRLKLDITKVYFSPRLATERMRVFKMA 180
Query: 181 QEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVVPILGDSR 240
+EGE+VFDMFAGVGPFSILLAKKA +VFACDINPWAIKYLEENIKLNKV N++PIL D
Sbjct: 181 REGEIVFDMFAGVGPFSILLAKKARMVFACDINPWAIKYLEENIKLNKVKNIIPILSDVT 240
Query: 241 EIEVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF 300
++ VKADRIIMNLPKYA FLEHA+ C+N+GG+IHYYGFGPE DPYGWH++RI E+A +
Sbjct: 241 KVCVKADRIIMNLPKYASRFLEHAMRCVNNGGIIHYYGFGPEKDPYGWHVKRINEVAGRL 300
Query: 301 GVKVEVLGKRVIRNYAPRQYNIAIDFRVSF 330
GVKVE+LGKR+IRNYAPRQYNIAIDFRVSF
Sbjct: 301 GVKVEILGKRIIRNYAPRQYNIAIDFRVSF 330
>sp|Q58293|Y883_METJA HYPOTHETICAL PROTEIN MJ0883 >gi|2128555|pir||C64410 hypothetical
protein MJ0883 - Methanococcus jannaschii
>gi|1499713|gb|AAB98887.1| (U67532) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 336
Score = 270 bits (682), Expect = 2e-71
Identities = 152/347 (43%), Positives = 230/347 (65%), Gaps = 31/347 (8%)
Query: 1 MTLAVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKG---------FEV 51
M L +K+ K GE RR LIE L+ YKI EGN+L +P+K + FE+
Sbjct: 1 MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFEL 60
Query: 52 VEAELEQ--VSRRPNSYREIVNVPQELRR-----FLPTSFDIIGNIAIIEIPEEL-KGYA 103
V+ ELE+ + ++P S+REI++ ++ R+ + S+D++G++ I++I +E+ +
Sbjct: 61 VDKELEEKKIIKKP-SFREIIS--KKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIR 117
Query: 104 KEIGRAIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKV 163
KEIG ++ K V+ + S+++GE+R REL H+AGEN T TIH+ENG RL +D+AKV
Sbjct: 118 KEIGELAYKLIP-CKGVFRRKSEVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKV 176
Query: 164 YFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEEN 223
YFSPRL ER R+ K +VV DMFAGVGPFSI K A+ ++A DINP AI+ L++N
Sbjct: 177 YFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSI-ACKNAKKIYAIDINPHAIELLKKN 235
Query: 224 IKLNKV-NNVVPILGDSREIEVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPE 282
IKLNK+ + ++PIL D RE++VK +R+IMNLPK+AH+F++ A+ + +GGVIHYY G +
Sbjct: 236 IKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKD 295
Query: 283 GDPYGWHLERIRELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRVS 329
D + I+ K EVL KR++++YAPR+Y +A+DF+++
Sbjct: 296 FD------KAIKLFEKK--CDCEVLEKRIVKSYAPREYILALDFKIN 334
>pir||F69117 conserved hypothetical protein MTH1873 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623010|gb|AAB86339.1| (AE000939) met-10+ protein
[Methanobacterium thermoautotrophicum]
Length = 352
Score = 237 bits (599), Expect = 1e-61
Identities = 143/338 (42%), Positives = 207/338 (60%), Gaps = 20/338 (5%)
Query: 5 VKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVK-----GFEVVEAELEQV 59
+KVP + + + L+ L+ Y+I R+ + IP++ V+ G E+V+ E ++
Sbjct: 4 LKVPKRMANDIIKMLVAGSLLNRDYRISRDHEHVYIPLREDVRIPEIDGAEIVDREFKES 63
Query: 60 SRRPNSYREIVN--VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNV 117
R P + +I+ +P++ + SFDIIG+ I+EIPEEL+ Y IG A +E
Sbjct: 64 KRSPARFTDILKSKIPEDALASIRRSFDIIGDTVILEIPEELQDYRFIIGEAALEFTGR- 122
Query: 118 KAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVF 177
KAVYMK S ++G RTREL IAG ++ETIH+E G R+K+D+ VYFSPRLA ER V
Sbjct: 123 KAVYMKRSGVKGVTRTRELELIAGSALSETIHQEYGSRIKVDIKDVYFSPRLANERETVA 182
Query: 178 KMAQEGEVVFDMFAGVGPFSILLAK--KAELVFACDINPWAIKYLEENIKLNKVNNV-VP 234
++GEVV DMFAG GPF+I +A+ +A V+A DINP A++Y+EEN +LN +V V
Sbjct: 183 AQVKDGEVVLDMFAGAGPFAIAVARHGRASRVYAVDINPAAVRYIEENARLNHAEDVIVA 242
Query: 235 ILGDSREI----EVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHL 290
+ GD RE E AD IIMNLP A EFL+ AI + DGGVIHYY F + + +
Sbjct: 243 VEGDVREFLRDRECFADHIIMNLPGSACEFLDDAIRALRDGGVIHYYEFARD---FKTPV 299
Query: 291 ERIRELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
R++E A F V+VL R +++ +P +++ ID R+
Sbjct: 300 NRLKEAAKPF--HVDVLDMRRVKSRSPGVWHMGIDARI 335
>gi|11499555 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450736|pir||D69496 conserved hypothetical protein
AF1973 - Archaeoglobus fulgidus
>gi|2648568|gb|AAB89282.1| (AE000967) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 336
Score = 212 bits (535), Expect = 4e-54
Identities = 133/335 (39%), Positives = 203/335 (59%), Gaps = 19/335 (5%)
Query: 4 AVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPV----KFPVKGFEVVEAELEQV 59
AV+VP E E VRR +LG D + +I G+++ IP+ + KG+ +VE +
Sbjct: 10 AVRVPKSEAEQVRRLAEKLGVKDKSRRITATGDYVEIPIIDSAESFFKGYTIVEQDNPVF 69
Query: 60 SRRPNSYREIVN--VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNV 117
SR+ S REI+ VP+EL +PT++ +IG+I ++++ E + YAK IG A+++++
Sbjct: 70 SRK-RSLREILRGKVPEEL---IPTNYKVIGDIVVVKLDERAREYAKVIGEALMQINP-C 124
Query: 118 KAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVF 177
KAV+ + G R + IAGE + T HRENG R ++DVAKV FS ERMR+
Sbjct: 125 KAVWCDYGRY-GMKRKPRMELIAGEG-SVTEHRENGCRFRIDVAKVMFSLGNQAERMRIA 182
Query: 178 KMAQEGEVVFDMFAGVGPFSILLA--KKAELVFACDINPWAIKYLEENIKLNKVNNVVPI 235
++ ++GEVV DMFAG+G FSI +A KA +++ +INP + K L ENIKLN V N+VPI
Sbjct: 183 RLVEDGEVVVDMFAGIGYFSIPIAVHSKARRIYSIEINPESYKLLLENIKLNDVGNIVPI 242
Query: 236 LGDSREI--EVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERI 293
LGDS+ + E ADR++M Y H++L AI + + GV+HY+ PE + R+
Sbjct: 243 LGDSQFVTPEGVADRVVMG-HIYCHDYLHTAIRALKERGVVHYHEATPEA-VIDRPVRRV 300
Query: 294 RELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
+ K G K +LG + ++NY+P Y++ +D V
Sbjct: 301 EKACRKMGKKCRILGFKKVKNYSPGVYHVVVDAEV 335
>gb|AAG19508.1| (AE005042) Vng1117c [Halobacterium sp. NRC-1]
Length = 327
Score = 188 bits (473), Expect = 7e-47
Identities = 129/330 (39%), Positives = 179/330 (54%), Gaps = 15/330 (4%)
Query: 5 VKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAELEQVSRRPN 64
V+VP+ +GE R+RL + +D+T+ I L IPV V L VS
Sbjct: 6 VRVPVDDGEATRQRLADADLIDDTHAIAAADGALHIPVTDAA----AVPDALSVVSFDAP 61
Query: 65 SYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKG 124
R P ++ F P S+ +G+I I++ + + +A I A+VE V+AV +
Sbjct: 62 P-RRTQTTPADILGFDP-SYARLGDIVIVDEDDSDRAHA--IADAVVESDIPVEAVLNRA 117
Query: 125 SKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGE 184
SKI+GE R RE IAG++ TET+HRE G LDVA VYFSPRLATER RV + GE
Sbjct: 118 SKIKGEQRVREWDVIAGDS-TETVHREYGHAFALDVAAVYFSPRLATERHRVVEQVTAGE 176
Query: 185 VVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKV-NNVVPILGDSREIE 243
VFDMFAGVGP+++ +A V A D+N AI YL+ N N V + V + GD RE+
Sbjct: 177 HVFDMFAGVGPYAVPMASAGARVVATDVNETAIDYLQANAARNGVADRVTGVAGDVREVA 236
Query: 244 VK----ADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANK 299
+ ADRI+MNLP A EFLE A++ D +H+Y E + IR A
Sbjct: 237 GEYTGWADRIVMNLPHTADEFLETAVALAGDECTLHFYDIQHEDGRFDAGEAAIRAAARP 296
Query: 300 FGVKVEVLGKRVIRNYAPRQYNIAIDFRVS 329
V V + +R+YAP ++N+ +D +S
Sbjct: 297 -AYDVTVATRHTVRSYAPHEFNVVLDVSLS 325
>emb|CAC11965.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 306
Score = 173 bits (435), Expect = 2e-42
Identities = 111/281 (39%), Positives = 156/281 (55%), Gaps = 30/281 (10%)
Query: 5 VKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVV-EAELEQVSRRP 63
V+V E R L G D Y I R+G+++LIPV G VV EAE
Sbjct: 7 VRVRKHMAERTIRDLRNAGLYDTNYTIARDGDYVLIPVTDDYSGEHVVMEAE-------- 58
Query: 64 NSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMK 123
P +RR SFD IG+IAI +K Y + + I+ HK +++V+
Sbjct: 59 ---------PTNMRRSASGSFDTIGSIAI------MKKYDEALANDILLTHKKIRSVFFD 103
Query: 124 GSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEG 183
+ G R R+L +AGEN T T +RENG +DVAK YFSPRLATER R+ +G
Sbjct: 104 EG-VGGPERIRKLRLVAGENNTVTEYRENGCSFTVDVAKAYFSPRLATERRRIVDQVSDG 162
Query: 184 EVVFDMFAGVGPFSILLAKKAEL-VFACDINPWAIKYLEENIKLNKVNNVV-PILGDSR- 240
E +FDMFAGVGP SI +A+ + + A DIN A++ L+EN++ N + ++ P D+R
Sbjct: 163 EFIFDMFAGVGPISIEIARYRRVRIIAADINCDAVEMLKENMEKNPLRGIIEPFCEDARI 222
Query: 241 --EIEVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGF 279
E ADR+IMN P + EF+++A+ + +GGVI+YY F
Sbjct: 223 AAERVTGADRVIMNHPTASFEFIDYAVKTLREGGVINYYEF 263
>gi|11498311 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450738|pir||H69337 conserved hypothetical protein
AF0704 - Archaeoglobus fulgidus
>gi|2649912|gb|AAB90537.1| (AE001056) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 273
Score = 166 bits (415), Expect = 4e-40
Identities = 97/262 (37%), Positives = 152/262 (57%), Gaps = 9/262 (3%)
Query: 74 QELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEYRT 133
+E + + SF+IIG++ IIEIP+E+ ++++I AI++ HK+VK V K +++G YR
Sbjct: 13 EEELKLVRRSFEIIGDVVIIEIPDEIMHHSRDIVEAILKRHKHVKTVLRKVGEVDGVYRV 72
Query: 134 RELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGV 193
I GE TET+ RE+G R +D K Y+S +L+ ER R+ ++ EGE V MFAGV
Sbjct: 73 ARYEPIYGEK-TETVVREHGCRFLVDPTKAYYSVKLSGERERIARLVGEGERVLVMFAGV 131
Query: 194 GPFSILLAKKA--ELVFACDINPWAIKYLEENIKLNKVNNVVPIL-GDSREI----EVKA 246
GP+ I++AK A V ++NP A++Y +N++LNKV VV ++ GD E+ +
Sbjct: 132 GPYPIVIAKLARPREVVGVELNPHAVEYFRQNVRLNKVEGVVKVIEGDVEEVVPQLSGQF 191
Query: 247 DRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKFGVKVEV 306
DR++M P A F+ + GG +HYY F + + E++R G++VEV
Sbjct: 192 DRVVMPAPYSAENFIHLLRGKVRRGGFVHYYTFDSQNEEKILP-EKVRRKFEDEGLEVEV 250
Query: 307 LGKRVIRNYAPRQYNIAIDFRV 328
+ R N+AP +D RV
Sbjct: 251 VKMRRCGNFAPYVNRYVLDLRV 272
>sp|Q58952|YF57_METJA HYPOTHETICAL PROTEIN MJ1557 >gi|2128934|pir||D64494 conserved
hypothetical protein MJ1557 - Methanococcus jannaschii
>gi|1500450|gb|AAB99577.1| (U67596) met-10+ related
protein [Methanococcus jannaschii]
Length = 249
Score = 163 bits (408), Expect = 3e-39
Identities = 102/243 (41%), Positives = 149/243 (60%), Gaps = 11/243 (4%)
Query: 87 IGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGENITE 146
IG++ I++ K +++ R IV+ K KA+ + ++I GE+RT + + G+ TE
Sbjct: 8 IGDVVIVK-----KELSEDEIREIVKRTK-CKAILLYTTQITGEFRTPHVKILYGKE-TE 60
Query: 147 TIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSILLAK--KA 204
TIH+E G KLDVAK+ +S ER R+ ++ E EVV DMFAG+G F+I LAK K
Sbjct: 61 TIHKEYGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKP 120
Query: 205 ELVFACDINPWAIKYLEENIKLNKVNNVVPILGDSREIEVK--ADRIIMNLPKYAHEFLE 262
+LV+A + NP A YL ENIKLNK+NNV+PIL D+R++E+K ADR+IM H+FL+
Sbjct: 121 KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVHKTHKFLD 180
Query: 263 HAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKFGVKVEVLGKRVIRNYAPRQYNI 322
+ D GVIHY+ E Y +ER++ A K G K+ R I+ YAP +++
Sbjct: 181 KTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHV 240
Query: 323 AID 325
+D
Sbjct: 241 VVD 243
>pir||D71128 hypothetical protein PH0793 - Pyrococcus horikoshii
>gi|3257203|dbj|BAA29886.1| (AP000003) 278aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 278
Score = 154 bits (386), Expect = 1e-36
Identities = 101/268 (37%), Positives = 151/268 (55%), Gaps = 9/268 (3%)
Query: 67 REIVN--VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKG 124
REI++ +P+EL + LP + IG++ ++ + EL+ Y I EV VK V KG
Sbjct: 11 REILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIAEVYAEV-LGVKTVLRKG 69
Query: 125 SKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGE 184
I GE R + + G + T T+H ENGI+ KLDVAK+ FSP ER+R+ K+A+ E
Sbjct: 70 H-IHGETRKPDYELLYGSD-TVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDE 127
Query: 185 VVFDMFAGVGPFSILLAKKAEL-VFACDINPWAIKYLEENIKLNKVNNVVPILG-DSREI 242
+V DMFAG+G S+ +A + V A + +P+ K+L ENI LNKV + + D+R+
Sbjct: 128 LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187
Query: 243 --EVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF 300
E ADRI+M HEF+ A+S DG +IHY+ PE E + + ++
Sbjct: 188 PGENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247
Query: 301 GVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
G VE L + I+ YAP +++ +D RV
Sbjct: 248 GYDVEKLNELKIKRYAPGVWHVVLDLRV 275
>pir||C69027 conserved hypothetical protein MTH1200 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622309|gb|AAB85689.1| (AE000888) met-10+ related
protein [Methanobacterium thermoautotrophicum]
Length = 244
Score = 148 bits (369), Expect = 1e-34
Identities = 85/225 (37%), Positives = 136/225 (59%), Gaps = 10/225 (4%)
Query: 109 AIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPR 168
A++E+ + ++G I G R + +AG TET+H+ENG ++D+++V +S
Sbjct: 24 ALLEMEGVRSVIRVEG--IHGPLRRPRVRVLAGSG-TETVHKENGCLFRIDLSRVMWSRG 80
Query: 169 LATERMRVFKMAQEGEVVFDMFAGVGPFSILLAKKAE--LVFACDINPWAIKYLEENIKL 226
ER R+ + +EGE V DMFAG+G FSI +A ++ V++ ++NP + + L+ NI L
Sbjct: 81 NINERARIPSLVEEGETVVDMFAGIGYFSIPVAVHSDPGRVYSVELNPDSFELLKSNITL 140
Query: 227 NKVNNVV-PILGDSREI--EVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEG 283
N+V ++ PILGD RE+ E+ ADR+IM H FL+ A+ C+ DGGVIHY+ PE
Sbjct: 141 NRVEGIIEPILGDCREVAPELDADRVIMGYVGRTHHFLDAAMECVRDGGVIHYHETAPEA 200
Query: 284 DPYGWHLERIRELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
+ L RI A+ +V +L KRVI+ Y+P +++ +D R+
Sbjct: 201 IRFSRPLRRIERAAHP--RRVSLLDKRVIKKYSPGVWHVVLDVRI 243
>pir||A72674 hypothetical protein APE0815 - Aeropyrum pernix (strain K1)
>gi|5104478|dbj|BAA79793.1| (AP000060) 341aa long
hypothetical protein [Aeropyrum pernix]
Length = 341
Score = 146 bits (366), Expect = 2e-34
Identities = 93/261 (35%), Positives = 155/261 (58%), Gaps = 25/261 (9%)
Query: 85 DIIGNIAIIEIP-------EELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEYRTR-EL 136
DIIG+IA+I+ P E+L+ A E+ R + +V++V++ + G ++ R +L
Sbjct: 79 DIIGDIAVIKKPIHGGVSIEDLRLVAGELLRRL----PHVRSVWLATGPVGGLFKVRRDL 134
Query: 137 IHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPF 196
+H+AGE T T++RE+G +D++KV+ +PRL+ E +RV ++ + GE V +MFAGVG F
Sbjct: 135 LHLAGEKRTSTVYREHGAEFLVDISKVFITPRLSFEHLRVARLVKPGETVVNMFAGVGVF 194
Query: 197 SILLAKKA--ELVFACDINPWAIKYLEENIKLNKVNNVV-PILGDSREIEVK-----ADR 248
SI++A K+ V++ DINP A + + ENI+LN+V +VV P+LGDS I + ADR
Sbjct: 195 SIIIALKSRPSKVYSIDINPDAYRLMIENIRLNRVEDVVEPMLGDSARIVSESLRGVADR 254
Query: 249 IIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIREL----ANKFGVKV 304
++M LP A +++ HA+ + G +H Y + + HL R +L + G +V
Sbjct: 255 VLMPLPDLALDYIGHALDALRGRGWLHVY-LHVDYERGKGHLRRACKLVEAEVERRGWRV 313
Query: 305 EVLGKRVIRNYAPRQYNIAID 325
RV+R+ P+ + +D
Sbjct: 314 VEAKARVVRSVGPKLLQVVVD 334
>pir||F75198 hypothetical protein PAB2272 - Pyrococcus abyssi (strain Orsay)
>gi|5457546|emb|CAB49037.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 333
Score = 144 bits (359), Expect = 2e-33
Identities = 107/336 (31%), Positives = 177/336 (51%), Gaps = 20/336 (5%)
Query: 5 VKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVK----FPVKGFEVVEAELEQVS 60
VKV ++ + V L +G LD K R+ +++ PV G EVV+ EL
Sbjct: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRP 63
Query: 61 RRPNSYREIVNV-PQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKA 119
R Y+ + ++ P+E+ + L DI+G+IAI+ IP+E+ + I AI +++ VK
Sbjct: 64 ER-QIYKNLEDLLPREIFKKLGR-LDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKV 121
Query: 120 VYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKM 179
+ +G G YR REL I GEN TIH+ENG+ +K+D++KV+F+PR+ ER R+ ++
Sbjct: 122 IARRGFH-SGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL 180
Query: 180 AQEGEVVFDMFAGVGPFSILLAK-KAELVFACDINPWAIKYLEENIKLNK---VNNVVPI 235
+GE + FAGV P+ +++A+ K V+A +IN +A+K EEN++LN+ + I
Sbjct: 181 VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII 240
Query: 236 LGDSREIEVKA---DRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLER 292
GD E+ DR++ PK +++ +HYY F E + + ER
Sbjct: 241 HGDVFEVLPNLPNFDRVVSPTPKGVDAL---SLTLSKAEKFLHYYDFVHESEIERFR-ER 296
Query: 293 IRELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
+ E + G + V R + +Y P Y + D +
Sbjct: 297 VLEECRRQGKECRV-SVRKVSDYKPHVYKVCADVEI 331
>gb|AAG20549.1| (AE005125) Vng2475c [Halobacterium sp. NRC-1]
Length = 346
Score = 143 bits (357), Expect = 3e-33
Identities = 108/350 (30%), Positives = 178/350 (50%), Gaps = 30/350 (8%)
Query: 2 TLAVKVPLKEGEIVRRRLIELGALDNTYKIKR-EGNFLLIPVKFPVKG--FEVVEAELEQ 58
+LAV VP + + L + G D+ K++ + + + +PV FE A+ +
Sbjct: 3 SLAVVVPKPDSQRAIDGLEDEGVYDDRRKVREHDADHVELPVTAEPDAVPFERAIAQADP 62
Query: 59 VSRRPN---SYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHK 115
R P+ RE E R P+S+ ++G++ + + + + E+G A++E+H+
Sbjct: 63 DPRAPDLGDRLRERGWSAAERER-APSSWAVLGSVILADFTDCPR--PGEVGAALLELHR 119
Query: 116 NVKAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMR 175
V +G + GE+RT ++ +AG+ TET+H E+G R LD+A V FSP ER R
Sbjct: 120 EADTVLDRGDGVAGEHRTPDVSVVAGDGDTETVHVEHGTRYALDLAAVMFSPGNKAERAR 179
Query: 176 VFKMAQEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVV-P 234
+ GE V DMFAGVG F++ +A+ V A + NP A ++L EN +LN V +
Sbjct: 180 MGDATGPGERVLDMFAGVGYFALPMARAGATVTAVEKNPTAFRFLAENAQLNDVAETLDT 239
Query: 235 ILGDSREIEVKADRIIM---------------NLPKYAHEFLEHAISCINDGGVIHYYGF 279
ILGD RE++ ADRI+M + P Y L++ +S GGV+H +
Sbjct: 240 ILGDCREVDAPADRIVMGYYDALGGGPVGDAASTPGYLDAALDNLVS----GGVLHAHSA 295
Query: 280 GPEGDPYGWHLERIRELANKFGVKV-EVLGKRVIRNYAPRQYNIAIDFRV 328
PE + + L R+R + G VL R +++++ +++ ID RV
Sbjct: 296 VPEAELWERPLSRLRAGCQRAGRPAPTVLDTRRVKSHSEGVFHVVIDARV 345
>gb|AAK42582.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 262
Score = 141 bits (352), Expect = 1e-32
Identities = 86/254 (33%), Positives = 143/254 (55%), Gaps = 19/254 (7%)
Query: 85 DIIGNIAIIEIPEELKGY-AKEIGRAIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGEN 143
+I+G+I II +P K EI I+ VK+V+ + + G YR +H+AGE
Sbjct: 19 EIVGDIVIIGVPFNKKPEDLVEIANEILSTFPYVKSVWGRHRDVNGTYRLSTYVHLAGEK 78
Query: 144 ITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSILLA-- 201
+ET+++E+ + LD KV+FS +L+ E +RV + E++ +MF+G GPFSIL A
Sbjct: 79 RSETVYKEHKCKYFLDFTKVFFSEKLSYEHLRVATQVKRDEIIINMFSGFGPFSILSAVL 138
Query: 202 KKAELVFACDINPWAIKYLEENIKLNKVNNVVPILGDS--REIEVK-ADRIIMNLPKYAH 258
+ ++V++ D+NP+A Y+ N++LNK V+PI GD+ R E++ ADRII LP+ A
Sbjct: 139 GRPKIVYSIDLNPYAYYYMMVNVELNKAYEVLPIYGDAFKRIYELEDADRIIAPLPELAD 198
Query: 259 EFLEHAISCINDGGVIHYY---GFGPEGDPYGWHLERIRELANKFGVKVEVLGKRVIRNY 315
+ E A+ + GG+IH Y DP + + R + FG R++R+
Sbjct: 199 KAYEVALQKVKKGGIIHLYTEVETNKGEDPVRIAMNKYR--GSYFG--------RIVRSV 248
Query: 316 APRQYNIAIDFRVS 329
P +Y++ +D + +
Sbjct: 249 NPHKYHVVVDIKAN 262
>pir||D75035 met-10+ related protein. PAB1538 - Pyrococcus abyssi (strain Orsay)
>gi|5458690|emb|CAB50177.1| (AJ248287) MET-10+ RELATED
PROTEIN. [Pyrococcus abyssi]
Length = 278
Score = 138 bits (343), Expect = 1e-31
Identities = 95/268 (35%), Positives = 148/268 (54%), Gaps = 9/268 (3%)
Query: 67 REIVN--VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKG 124
REI++ +P +L LP + +G+I ++ + EL+ Y I +V VK V KG
Sbjct: 11 REILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKV-LGVKTVLRKG 69
Query: 125 SKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGE 184
I GE R + + G N T T+H ENGI+ KLDVAK+ FSP ER+R+ K+A+ E
Sbjct: 70 H-IYGETRKPDYEILYG-NDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNE 127
Query: 185 VVFDMFAGVGPFSILLAKKAEL-VFACDINPWAIKYLEENIKLNKVNNVVPILG-DSREI 242
+V DMFAG+G S+ +A + V A + +P+ K+L ENI+LNKV + + D+R+
Sbjct: 128 LVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDF 187
Query: 243 --EVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF 300
E ADRI+M EF+ A+S D +IHY+ PE +++A +
Sbjct: 188 PGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREH 247
Query: 301 GVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
G + E + + I+ YAP +++ +D +V
Sbjct: 248 GYEAEKINELRIKRYAPGVWHVVVDIKV 275
>pir||A71232 hypothetical protein PH0115 - Pyrococcus horikoshii
>gi|3256501|dbj|BAA29184.1| (AP000001) 296aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 296
Score = 127 bits (317), Expect = 1e-28
Identities = 86/251 (34%), Positives = 140/251 (55%), Gaps = 13/251 (5%)
Query: 85 DIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGENI 144
DI+G+IAII IP+EL I AI +++ +K + +G G YR R L I GEN
Sbjct: 51 DIVGDIAIISIPDELMPRKGVIVEAIRKLYPKIKVIARRGFHT-GVYRVRRLEVIWGENR 109
Query: 145 TETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSILLAKKA 204
+TIH+ENG+ LK+D++KV+F+PR+ ER R+ ++ ++GE + FAGV P+++++A+
Sbjct: 110 LQTIHKENGVLLKIDLSKVFFNPRMKGERYRLAQLIKDGERILIPFAGVLPYALVIARFR 169
Query: 205 EL-VFACDINPWAIKYLEENIKLNK---VNNVVPILGDSREIEVKA---DRIIMNLPKYA 257
++ + A ++N A+K +EN+ LNK + I GD ++ K DR+I PK
Sbjct: 170 KVDIVAVELNDEAVKLAQENVLLNKDKLKGKISIIHGDVFDVLPKLPSFDRVISPTPKGV 229
Query: 258 HEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKFGVKVEVLGKRVIRNYAP 317
A++ +HYY F E D G E+I + K G + +V ++V +Y P
Sbjct: 230 DAL---ALTLSKAKRFLHYYDFIHE-DKLGEFKEKIIKECQKQGKECKVKVRKV-ADYKP 284
Query: 318 RQYNIAIDFRV 328
Y + D +
Sbjct: 285 HVYKVCADIEI 295
>dbj|BAA92631.1| (AB037814) KIAA1393 protein [Homo sapiens]
Length = 500
Score = 127 bits (316), Expect = 2e-28
Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 51/336 (15%)
Query: 38 LLIPVK-FPVKGFEVVEAE-LEQVSRRPNSYREIVNVPQE-------LRRFLPTSFDI-- 86
+L P K F FE E LEQ++ P + + + E LR LP D+
Sbjct: 130 MLDPYKIFTHDSFEKAELSVLEQLNVSPQISKYNLELTYEHFKSEEILRAVLPEGQDVTS 189
Query: 87 ----IGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGE 142
IG+IA + + + + IG+ +++ + + + K + I+ YR ++ ++GE
Sbjct: 190 GFSRIGHIAHLNLRDHQLPFKHLIGQVMIDKNPGITSAVNKINNIDNMYRNFQMEVLSGE 249
Query: 143 NITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSILLAK 202
T REN + D +KVY++PRL+TE R+ ++ + G+V+FD+FAGVGPF+I +AK
Sbjct: 250 QNMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITELLKPGDVLFDVFAGVGPFAIPVAK 309
Query: 203 KAELVFACDINPWAIKYLEENIKLNKVNNVVPI--------------------LGDSREI 242
K VFA D+NP + K+L N KLNKV+ V + LG S+E
Sbjct: 310 KNCTVFANDLNPESHKWLLYNCKLNKVDQKVKVFNLDGKDFLQGPVKEELMQLLGLSKER 369
Query: 243 EVKADRIIMNLPKYAHEFLEHAISCINDG--------GVIHYYGFGPEGDPYGWHLERIR 294
+ ++MNLP A +FL A + DG ++H Y F + +P E +R
Sbjct: 370 KPSV-HVVMNLPAKAIKFLS-AFKWLLDGQPCSSEFLPIVHCYSFSKDANP----AEDVR 423
Query: 295 ELANK-FGVKVEVLGK-RVIRNYAPRQYNIAIDFRV 328
+ A G+ +E ++RN AP + + I F++
Sbjct: 424 QRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQI 459
>emb|CAC12055.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 329
Score = 125 bits (312), Expect = 5e-28
Identities = 107/346 (30%), Positives = 164/346 (46%), Gaps = 39/346 (11%)
Query: 2 TLAVKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAELEQVSR 61
+++ +P ++ + V + L+ G + KIK+ G F+ +PV E A L+ R
Sbjct: 3 SISYLIPRRKADEVIKYLMRSGRIRKDLKIKKVGEFIAVPVNGEDPAIEFNVAHLDFEER 62
Query: 62 RPNSYREIV------------NVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRA 109
R + +E++ NVP R+ GN + P E E
Sbjct: 63 RQENIKEMMKDLLSKEYGYHGNVPDRWVRY--------GNALFLNSPIE------ECVFK 108
Query: 110 IVEVHKNVKAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRL 169
+++ +++VY+ I G R + + G E IH ENGIR K D K+ FSP
Sbjct: 109 VMKRFLGIESVYVYHG-IAGSERIPVVEFLYGRR-GEVIHIENGIRFKFDPEKIMFSPGN 166
Query: 170 ATERMRVFKMAQEGEVVFDMFAGVGPFSILLAKKAE--LVFACDINPWAIKYLEENIKLN 227
ER R+ M EGE V DMF+G+G F++ +AK +FACDINP AI YL+EN +N
Sbjct: 167 TNERTRMRYMTFEGETVLDMFSGIGYFALPVAKYGNPMRIFACDINPDAIHYLKENAVIN 226
Query: 228 KVNN-VVPILGDSREIEVKA--DRIIMNLPKYAHEFLEHAI--SCINDGGVIHYYGFGPE 282
V N VVPILGDSR K D IIM K + FL A+ S N ++H+
Sbjct: 227 GVENIVVPILGDSRLSCPKGPFDSIIMGNFK-SLMFLPGALERSKKNTRIILHHL---VS 282
Query: 283 GDPYGWHLERIRELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
+ G + I + G V ++++YAP+ ++++ R+
Sbjct: 283 QEDLGSYKYSIMSYTSSLGYLTAVEDSHIVKSYAPKMFHVSTTLRI 328
>gb|AAF47727.1| (AE003477) CG12032 gene product [Drosophila melanogaster]
Length = 537
Score = 120 bits (297), Expect = 3e-26
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 55/365 (15%)
Query: 14 IVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAE---LEQVSRRPNSYREIV 70
+V++ L+++ L + + LL P PVK ++ + E ++V+ S+ ++
Sbjct: 45 LVKKFLLKMEHLHPVRAVDQSREILLHPT--PVKNWDSLPTEDLQRQKVNAENFSFADLE 102
Query: 71 ------NVPQELRRFLPT------SFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVK 118
+ + L+ LPT S+ IG+IA + + + L Y + IG+ + + N +
Sbjct: 103 LRYENWSANEILKSVLPTEEEGLTSYSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCR 162
Query: 119 AVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFK 178
V K S I+ YR +L I G+ + +ENG+ + D +KVY++PRL+TE R+ K
Sbjct: 163 TVVNKASSIDNTYRNFQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVK 222
Query: 179 MAQEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNK-VNNVVPILG 237
M + +V++D+FAGVGPFSI AKK V A D+NP + ++L+ N K NK + N+
Sbjct: 223 MLKSDDVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNIKMSNK 282
Query: 238 DSREI---EVKAD---------------RIIMNLPKYAHEFLEHAISCINDGGV------ 273
D R+ E++ D I MNLP A EFL+ + +
Sbjct: 283 DGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAFRGLYSADELAQLPTN 342
Query: 274 -----IHYYGFGPEGDPYGWHLERIRELA-NKFGVKVE---VLGKRVIRNYAPRQYNIAI 324
+H Y F + E +R+L + G ++ + G +RN AP + +
Sbjct: 343 VCYPTVHVYSFAKGENT----KELVRQLVESNLGASLDENLLQGINFVRNVAPNKDMYRV 398
Query: 325 DFRVS 329
F++S
Sbjct: 399 SFKLS 403
>pir||C72711 hypothetical protein APE1106 - Aeropyrum pernix (strain K1)
>gi|5104776|dbj|BAA80091.1| (AP000060) 350aa long
hypothetical protein [Aeropyrum pernix]
Length = 350
Score = 118 bits (292), Expect = 1e-25
Identities = 93/287 (32%), Positives = 136/287 (46%), Gaps = 27/287 (9%)
Query: 5 VKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVKFPVKGFEVVEAE-LE------ 57
V V +GE R L G LD +K R G L++PV+ E + + LE
Sbjct: 11 VAVKTVDGERAIRLLRAAGLLDTGFKPARSGGRLMLPVEDAELALEALRSSGLEAWPCRA 70
Query: 58 --QVSRRPNSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYA--KEIGRAIVEV 113
+ RRP R + + + ++G+IA+ E G + A++
Sbjct: 71 SFEPRRRPRGLRSLGFEGL-------SGYSLVGDIAVFSRREGGPGVEEYRRAAEALMRE 123
Query: 114 HKNVKAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATER 173
V+AVY+K + + GE R + L+H+AGE T T+HRE G+ ++D+A+ YF+PRLA E
Sbjct: 124 QPRVRAVYLKEATV-GELRVQRLVHLAGEERTWTVHREFGLEFEVDIARAYFNPRLANEH 182
Query: 174 MRVFKMAQEGEVVFDMFAGVGPFSILLAK-KAELVFACDINPWAIKYLEENIKLN--KVN 230
V + EGE V DMF+GVG FSI A + V A DINP A N + N ++
Sbjct: 183 RLVAESVGEGERVLDMFSGVGGFSIHTASLRRASVVASDINPHAALLAARNARRNRRRLR 242
Query: 231 NVVPILGDS-----REIEVKADRIIMNLPKYAHEFLEHAISCINDGG 272
V +L R ++ IIMN P +H F A + GG
Sbjct: 243 GRVSVLRADAALLPRILQPVFTTIIMNHPTASHMFAWEACRLASSGG 289
>gi|6321861 Yhr070wp [Saccharomyces cerevisiae] >gi|731672|sp|P38793|YHN0_YEAST
HYPOTHETICAL 56.5 KDA PROTEIN IN DYS1-PCL5 INTERGENIC
REGION >gi|626628|pir||S46697 hypothetical protein
YHR070w - yeast (Saccharomyces cerevisiae)
>gi|487945|gb|AAB68376.1| (U00061) Yhr070wp
[Saccharomyces cerevisiae]
Length = 499
Score = 111 bits (276), Expect = 9e-24
Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 72 VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEY 131
+P++ +PT F I G+IA + + E K + IG+ I++ + ++ V K S I ++
Sbjct: 166 LPEQFLEEVPTGFTITGHIAHLNLRTEFKPFDSLIGQVILDKNNKIECVVDKVSSIATQF 225
Query: 132 RTRELIHIAGENITETIH-RENGIRLKLDVAKVYFSPRLATERMRVFKMA-QEGEVVFDM 189
RT + IAG++ + + +E+ K D +KVY++ RL TE R+ K Q G+VV D+
Sbjct: 226 RTFPMKVIAGKSDSLVVEQKESNCTFKFDFSKVYWNSRLHTEHERLVKQYFQPGQVVCDV 285
Query: 190 FAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVV 233
FAGVGPF++ KK +V A D+NP + KYL+ENI LNKV V
Sbjct: 286 FAGVGPFAVPAGKKDVIVLANDLNPESYKYLKENIALNKVAKTV 329
>gb|AAK42392.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 276
Score = 108 bits (266), Expect = 1e-22
Identities = 60/166 (36%), Positives = 100/166 (60%), Gaps = 5/166 (3%)
Query: 74 QELRRFLP--TSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEY 131
+ L F P S+ I+G IAII P+ + + I++ H +KAVY+K K++GE
Sbjct: 34 KRLSEFFPGVRSYYIVGEIAIIT-PKRVNVDYNLVAEKIMQAHPKIKAVYLK-KKVKGEL 91
Query: 132 RTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFA 191
RT EL ++GE I+ TI++ENG+ +D+ KVY +P L+ +R++ ++ +EG V D F
Sbjct: 92 RTNELEFLSGERISSTIYKENGVLFYVDINKVYVNPSLSGDRLKNLELVEEGSTVLDAFT 151
Query: 192 GVGPFSILLA-KKAELVFACDINPWAIKYLEENIKLNKVNNVVPIL 236
G G ++ +A KK V A DIN + L++++ LNK+ ++ I+
Sbjct: 152 GYGAIALNIAHKKRVYVVAGDINIDGLYMLKKSLSLNKIKGMIDIV 197
>pir||JC4255 met-10+ protein - Neurospora crassa >gi|773387|gb|AAC41673.1|
(L40806) Restriction enzyme inactivation of met-10
complementation in this region. Sequence similarity to
S. cerevisiae chromosome VIII cosmid 9205, accession no.
U10556 CDS residues 22627-24126 [Neurospora crassa]
>gi|1583208|prf||2120297B met-10 gene [Neurospora
crassa]
Length = 475
Score = 106 bits (262), Expect = 4e-22
Identities = 68/207 (32%), Positives = 111/207 (52%), Gaps = 11/207 (5%)
Query: 65 SYREIVN--VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYM 122
+Y +I+ +P+EL +P+ F+ G++A + + E Y K I I++ N++ V
Sbjct: 136 TYHDIITSILPEELHDDIPSGFNTAGHVAHMNLRERYIPYKKVIAEVILDKTTNIRTVIN 195
Query: 123 KGSKI--EGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMA 180
K + E E+RT + +AG + + EN + D +KVY++ +L E R+ M
Sbjct: 196 KVDNVGAESEFRTFQYEVLAGPDDMQVQVTENACSFEFDYSKVYWNSKLEAEHRRLINMF 255
Query: 181 QEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNKVNNVV-PILGDS 239
+ GEVV D+ AG+GPF++ KK V+A D+NP + KY++ I NKV+ V PI D
Sbjct: 256 EPGEVVCDVMAGIGPFAVPAGKKGVFVWANDMNPESNKYMQVAINRNKVSQYVRPICEDG 315
Query: 240 RE-IEVKADRIIMNLPKYAHEFLEHAI 265
R I AD ++ AH+ EH +
Sbjct: 316 RTFIHHAADSVL-----EAHKNGEHVL 337
>pir||T47729 hypothetical protein F18O21.80 - Arabidopsis thaliana
>gi|7572910|emb|CAB87411.1| (AL163763) putative protein
[Arabidopsis thaliana]
Length = 447
Score = 106 bits (261), Expect = 5e-22
Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 7/185 (3%)
Query: 50 EVVEAELEQVSRRPNSYREIVNVPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRA 109
E+ E +L Q+ + E+ VP + L S+ G+IA + + +EL + I +
Sbjct: 68 EIPEEKLNQLKK----LSELEVVPHSVT--LGYSYWSAGHIAHLNLHDELLPFKDVIAKV 121
Query: 110 IVEV-HKNVKAVYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPR 168
I + + +K + K I E+R + +AGEN ET ++ G R KLD VY++ R
Sbjct: 122 IYDKNYPRIKTIVNKVGTISNEFRVPKFEVLAGENGMETEVKQYGARFKLDYGLVYWNSR 181
Query: 169 LATERMRVFKMAQEGEVVFDMFAGVGPFSILLAKKAELVFACDINPWAIKYLEENIKLNK 228
L E MR+ + + GE V DMFAG+GPF+I A+K V+A D+NP +++YL+ N K NK
Sbjct: 182 LEHEHMRLSSLFKPGETVCDMFAGIGPFAIPAAQKGCFVYANDLNPDSVRYLKINAKFNK 241
Query: 229 VNNVV 233
V++++
Sbjct: 242 VDDLI 246
>gb|AAD48952.1|AF149414_1 (AF149414) contains similarity to Pfam family PF00145 (C-5
cytosine-specific DNA methylase); score=10.4. E=0.051,
N=1 [Arabidopsis thaliana] >gi|7267225|emb|CAB80832.1|
(AL161501) contains similarity to Pfam family PF00145
(C-5 cytosine-specific DNA methylase), score=10.4.
E=0.051, N=1, coded for by A. thaliana cDNA
T41604~strong similarity to~Contains Prokaryotic
membrane lipoprotein lipid attachment site AA40-50~con>
Length = 977
Score = 99.5 bits (244), Expect = 5e-20
Identities = 90/291 (30%), Positives = 141/291 (47%), Gaps = 19/291 (6%)
Query: 31 IKREGNFLLIPVKFPVKGFEVVEAELEQVSRRPNSYREIVNVPQELRRFLPTSFDIIGNI 90
+K G LI V F K +V ++ L+++ S + +P+EL LP ++ +G+I
Sbjct: 686 LKEHGAKKLINVAFEAK--KVAKSPLQRMREDITSILKQKGLPEELLDELPQKWERLGDI 743
Query: 91 AIIEIPEELKGYAKEIGRAI-VEVHKNVKA--VYMKGSKIEGEYRTRELIHIAGENITET 147
++ I + V K++ A + +G R L + G+N
Sbjct: 744 VVVPATSFKDPTWSSINDEVWCAVSKSLSANRLARQGRVEPNGTRDSTLEILVGDNGWVN 803
Query: 148 IHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSI--LLAKKAE 205
HRENGI D K FS +E++R+ MA E EVV D+FAG+G F + L+ KA+
Sbjct: 804 -HRENGILYSFDATKCMFSWGNLSEKLRMGNMACENEVVVDLFAGIGYFVLPFLVRAKAK 862
Query: 206 LVFACDINPWAIKYLEENIKLNKVNNVVPIL-GDSREIEVK--ADRIIMNLPKYAHEFLE 262
LV+AC+ NP AI+ L N++ N V+ IL GD+R K ADR+ + L +
Sbjct: 863 LVYACEWNPHAIEALRRNVEANSVSERCIILEGDNRITAPKGVADRVNLGLIPSSEGSWV 922
Query: 263 HAISCIN-DGGVIHYYGFGPEGDPYGW--HLER-----IRELANKFGVKVE 305
AI + +GG++H +G + D W H+ + R NKF K+E
Sbjct: 923 TAIQALRPEGGILHVHGNVKDSDESSWGEHVTKTLSDIARAEGNKFMNKIE 973
>gb|AAF19556.1|AC005761_4 (AC005761) L952.4 [Leishmania major]
>gi|6759105|gb|AAF27942.1|AC005767_3 (AC005767) L952.4
[Leishmania major] >gi|6778464|gb|AAF28368.1|AC005766_2
(AC005766) L952.4 [Leishmania major]
Length = 390
Score = 90.1 bits (220), Expect = 3e-17
Identities = 61/198 (30%), Positives = 102/198 (50%), Gaps = 20/198 (10%)
Query: 145 TETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSILLAKKA 204
T T H ENG+ DV++V FS TER+ + EVV DMF G+G F++ LA
Sbjct: 192 TFTAHVENGVIYSFDVSRVMFSSGNTTERIHFGTVTAADEVVVDMFCGIGYFTLPLAMHG 251
Query: 205 EL--VFACDINPWAIKYLEENIKLNKVNNVV-PILGDSREIEV----KADRIIMNLPKYA 257
+ + A + NP +I +++ N LNKV++++ P+ GD+RE+ K DR++M
Sbjct: 252 NVAAIHALEKNPDSIDFVKLNAVLNKVDHLIHPVCGDNREVGEELLGKCDRVLMGYIPTC 311
Query: 258 HEFLEHAISCI------NDGGVIHYYGFGPEGDPYGWHLERIRELANKFGVK----VEVL 307
FL A S + GV+HY+ D E +R++ ++ G + V +
Sbjct: 312 KSFLPRAASFLKRNEAGRSSGVVHYHFL---ADKLCAAQEALRDVQDELGEEVAAFVRIA 368
Query: 308 GKRVIRNYAPRQYNIAID 325
R +++YAP++++ D
Sbjct: 369 DLRCVKSYAPKRFHFVAD 386
>pir||T20173 hypothetical protein C53A5.2 - Caenorhabditis elegans
>gi|3875209|emb|CAB03994.1| (Z81486) Similarity to
Neurospora met-10+ protein (TR:Q01392)~cDNA EST
EMBL:T00910 comes from this gene [Caenorhabditis
elegans] >gi|3878789|emb|CAB01437.1| (Z78015) Similarity
to Neurospora met-10+ protein (TR:Q01392)~cDNA EST
EMBL:T00910 comes from this gene [Caenorhabditis
elegans]
Length = 1150
Score = 88.9 bits (217), Expect = 7e-17
Identities = 63/212 (29%), Positives = 105/212 (48%), Gaps = 32/212 (15%)
Query: 82 TSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKGSKIEGEYRTRELIHIAG 141
+S+ G+I +E+ + I +++ N K V KG+ I YR +L +AG
Sbjct: 570 SSYTQTGHIIHCNFADEILPFRFIIAEVLLDKVNNCKTVVQKGNIITNVYRNLDLELLAG 629
Query: 142 ENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFAGVGPFSI--L 199
E+ T +E G+R K+D +KVY++ RL+ E RV M +V+D G+GPF +
Sbjct: 630 EDNYVTEVKETGLRFKMDFSKVYWNSRLSHEHERVSGMFNTQSLVYDACCGIGPFVLPAT 689
Query: 200 LAKKAELVFACDINPWAIKYLEENIKLNKV---------------------NNVVPIL-- 236
L +K + V A D+NP ++K+L+ N+ LNK+ ++VV ++
Sbjct: 690 LKRKPKRVVANDLNPESVKWLKVNVGLNKIKEERIEIHNMDAKMFIKENVADDVVRLMLE 749
Query: 237 -GDSREIEVKADR------IIMNLPKYAHEFL 261
+ E E + + ++MNLP YA FL
Sbjct: 750 ESTAGEFENEVPKPMSEVHVVMNLPAYAVNFL 781
>gi|8923676 hypothetical protein FLJ20772 [Homo sapiens]
>gi|7021077|dbj|BAA91374.1| (AK000779) unnamed protein
product [Homo sapiens]
Length = 448
Score = 77.6 bits (188), Expect = 2e-13
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 75 ELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAI---VEVHKNVKAVYMKGSKIEGEY 131
EL LP S+ GN+ ++ K +G + V + V+ + +G
Sbjct: 125 ELEADLPRSWQRHGNLLLLSEDCFQAKQWKNLGPELWETVALALGVQRLAKRGRVSPDGT 184
Query: 132 RTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGEVVFDMFA 191
RT + + G++ H +NGIR K DV + FS TE++RV ++ GEV+ D++A
Sbjct: 185 RTPAVTLLLGDH-GWVEHVDNGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVLVDLYA 243
Query: 192 GVGPFSI--LLAKKAELVFACDINPWAIKYLEENIKLNKVNNVVPI-LGDSREIEVK--A 246
G+G F++ L+ A V AC+ NP A+ L N+++N V + I GD+R++++ A
Sbjct: 244 GIGYFTLPFLVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDNRKLKLSNIA 303
Query: 247 DRIIMNLPKYAHEFLEHAISCIND--GGVIHYY 277
DR+I+ L + E A + GG++H +
Sbjct: 304 DRVILGLIPSSEEGWPIACQVLRQDAGGILHIH 336
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.410
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120595332
Number of Sequences: 2977
Number of extensions: 5303457
Number of successful extensions: 12569
Number of sequences better than 1.0e-10: 29
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 12474
Number of HSP's gapped (non-prelim): 32
length of query: 330
length of database: 189,106,746
effective HSP length: 54
effective length of query: 276
effective length of database: 156,788,448
effective search space: 43273611648
effective search space used: 43273611648
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)