BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0538 (hisH-like) DE:imidazoleglycerol-phosphate synthase,
subunit H, putative
(196 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75124 probable imidazoleglycerol-phosphate synthase, chain... 390 e-108
pir||D71007 hypothetical protein PH1354 - Pyrococcus horikoshii ... 349 1e-95
gi|11498120 imidazoleglycerol-phosphate synthase, subunit H, put... 183 9e-46
pir||H72371 hypothetical protein TM0472 - Thermotoga maritima (s... 167 8e-41
sp|P37528|YAAE_BACSU HYPOTHETICAL 21.4 KD PROTEIN IN DACA-SERS I... 164 7e-40
pir||F69120 conserved hypothetical protein MTH190 - Methanobacte... 159 2e-38
sp|Q59055|YG61_METJA HYPOTHETICAL PROTEIN MJ1661 >gi|2128068|pir... 158 5e-38
gb|AAK40887.1| Glutamine amidotransferase, putative [Sulfolobus ... 154 7e-37
emb|CAB57729.1| (Y18930) hypothetical protein [Sulfolobus solfat... 154 7e-37
emb|CAC11158.1| (AL445063) hypothetical protein [Thermoplasma ac... 152 2e-36
pir||G75405 probable amidotransferase HisH - Deinococcus radiodu... 152 4e-36
emb|CAB70924.1| (AL137778) hypothetical protein SCL2.12c [Strept... 150 1e-35
dbj|BAB03742.1| (AP001507) amidotransferase [Bacillus halodurans] 149 2e-35
pir||C70570 hypothetical protein Rv2604c - Mycobacterium tubercu... 145 4e-34
pir||S72721 amidotransferase hisH homolog - Mycobacterium leprae... 144 8e-34
dbj|BAB08237.1| (AB011483) amidotransferase hisH-like protein [A... 139 2e-32
gb|AAG20639.1| (AE005133) imidazoleglycerol-phosphate synthase; ... 139 2e-32
pir||C72782 hypothetical protein APE0244 - Aeropyrum pernix (str... 139 2e-32
pir||T50149 conserved hypothetical protein SPAC222.08c [imported... 119 2e-26
sp|P45294|YG48_HAEIN HYPOTHETICAL PROTEIN HI1648 >gi|1074878|pir... 115 3e-25
gb|AAG09049.1|AF294268_1 (AF294268) pyridoxine synthesis protein... 115 4e-25
gi|6323742 Sno1p [Saccharomyces cerevisiae] >gi|2501684|sp|Q0314... 113 2e-24
gi|6321048 member of the stationary phase-induced gene family; S... 99 3e-20
gi|6323995 Induced in stationary phase; Sno2p [Saccharomyces cer... 98 6e-20
>pir||B75124 probable imidazoleglycerol-phosphate synthase, chain H PAB0538 -
Pyrococcus abyssi (strain Orsay)
>gi|5458218|emb|CAB49707.1| (AJ248285)
imidazoleglycerol-phosphate synthase, subunit H,
putative [Pyrococcus abyssi]
Length = 196
Score = 390 bits (991), Expect = e-108
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL
Sbjct: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV
Sbjct: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE
Sbjct: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
Query: 181 LTDDTRVHEYFLKKAL 196
LTDDTRVHEYFLKKAL
Sbjct: 181 LTDDTRVHEYFLKKAL 196
>pir||D71007 hypothetical protein PH1354 - Pyrococcus horikoshii
>gi|3257777|dbj|BAA30460.1| (AP000006) 196aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 196
Score = 349 bits (886), Expect = 1e-95
Identities = 164/196 (83%), Positives = 189/196 (95%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
MKVGV+GLQGDVSEHI+AT +A++KL + GE IWLK+PEQLK V A+IIPGGESTTISRL
Sbjct: 1 MKVGVVGLQGDVSEHIEATKMAIEKLELPGEVIWLKRPEQLKGVDAVIIPGGESTTISRL 60
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
MQ+TGLFEP+KK++EDGLPVMGTCAGLIML++EVLGATPEQ+FLEVLDV+VNRNAYGRQV
Sbjct: 61 MQRTGLFEPIKKMVEDGLPVMGTCAGLIMLAKEVLGATPEQKFLEVLDVKVNRNAYGRQV 120
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
DSFEAPV+L+FDDEPFIGVFIRAPRIVELLS++VKPLAWLEDRVVGVEQ+NIIGLEFHPE
Sbjct: 121 DSFEAPVKLAFDDEPFIGVFIRAPRIVELLSEKVKPLAWLEDRVVGVEQENIIGLEFHPE 180
Query: 181 LTDDTRVHEYFLKKAL 196
LT+DTR+HEYFL+K +
Sbjct: 181 LTNDTRIHEYFLRKVI 196
>gi|11498120 imidazoleglycerol-phosphate synthase, subunit H, putative
[Archaeoglobus fulgidus] >gi|7447525|pir||E69313
imidazoleglycerol-phosphate synthase subunit H homolog -
Archaeoglobus fulgidus >gi|2650108|gb|AAB90721.1|
(AE001068) imidazoleglycerol-phosphate synthase, subunit
H, putative [Archaeoglobus fulgidus]
Length = 198
Score = 183 bits (461), Expect = 9e-46
Identities = 97/196 (49%), Positives = 136/196 (68%), Gaps = 6/196 (3%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
MKV V+G+QGDV EH+ AT ALK+LG+ GE + ++ + A+I+PGGESTTIS+L
Sbjct: 1 MKVAVVGVQGDVEEHVLATKRALKRLGIDGEVVATRRRGVVSRSDAVILPGGESTTISKL 60
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSR---EVLGATPEQRFLEVLDVRVNRNAYG 117
+ G+ + + +L E+G PVMGTCAGLI+LS+ E + T + L +LD +V RNA+G
Sbjct: 61 IFSDGIADEILQLAEEGKPVMGTCAGLILLSKYGDEQVEKT-NTKLLGLLDAKVKRNAFG 119
Query: 118 RQVDSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEF 177
RQ +SF+ P+ + + + F VFIRAP I E+ D V+ LA E+ +V Q N++GL F
Sbjct: 120 RQRESFQVPLDVKYVGK-FDAVFIRAPAITEVGKD-VEVLATFENLIVAARQKNVLGLAF 177
Query: 178 HPELTDDTRVHEYFLK 193
HPELTDDTR+HE+FLK
Sbjct: 178 HPELTDDTRIHEFFLK 193
>pir||H72371 hypothetical protein TM0472 - Thermotoga maritima (strain MSB8)
>gi|4980982|gb|AAD35557.1|AE001725_2 (AE001725)
amidotransferase, putative [Thermotoga maritima]
Length = 188
Score = 167 bits (419), Expect = 8e-41
Identities = 94/194 (48%), Positives = 132/194 (67%), Gaps = 10/194 (5%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
MK+GV+G+QGDV EH++A L KLGV E + +K PEQL V +I+PGGESTT+ R+
Sbjct: 1 MKIGVLGVQGDVREHVEA----LHKLGV--ETLIVKLPEQLDMVDGLILPGGESTTMIRI 54
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
+++ + E + + I +GLPV TCAG+I+L++ + + E+ L VLD+ V RNAYGRQV
Sbjct: 55 LKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYSQEK--LGVLDITVERNAYGRQV 112
Query: 121 DSFEAPVRL-SFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHP 179
+SFE V + + +PF +FIRAPRIVE V+ LA + V V++ NI+ FHP
Sbjct: 113 ESFETFVEIPAVGKDPFRAIFIRAPRIVE-TGKNVEILATYDYDPVLVKEGNILACTFHP 171
Query: 180 ELTDDTRVHEYFLK 193
ELTDD R+H YFL+
Sbjct: 172 ELTDDLRLHRYFLE 185
>sp|P37528|YAAE_BACSU HYPOTHETICAL 21.4 KD PROTEIN IN DACA-SERS INTERGENIC REGION
>gi|2127020|pir||S66042 conserved hypothetical protein
yaaE - Bacillus subtilis >gi|467402|dbj|BAA05248.1|
(D26185) unknown [Bacillus subtilis]
>gi|2632279|emb|CAB11788.1| (Z99104) similar to
hypothetical proteins [Bacillus subtilis]
Length = 196
Score = 164 bits (411), Expect = 7e-40
Identities = 88/193 (45%), Positives = 127/193 (65%), Gaps = 9/193 (4%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
+ +GV+GLQG V EHI A ++ G +G + K+PEQL EV +I+PGGESTT+ RL
Sbjct: 2 LTIGVLGLQGAVREHIHA----IEACGAAGLVV--KRPEQLNEVDGLILPGGESTTMRRL 55
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
+ EP+++ G P+ GTCAGLI+L++E+ G+ + L +L+V V RN++GRQV
Sbjct: 56 IDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGS--DNPHLGLLNVVVERNSFGRQV 113
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
DSFEA + + DEPF GVFIRAP I+E + V+ L+ R+V +Q +G FHPE
Sbjct: 114 DSFEADLTIKGLDEPFTGVFIRAPHILE-AGENVEVLSEHNGRIVAAKQGQFLGCSFHPE 172
Query: 181 LTDDTRVHEYFLK 193
LT+D RV + F++
Sbjct: 173 LTEDHRVTQLFVE 185
>pir||F69120 conserved hypothetical protein MTH190 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621234|gb|AAB84696.1| (AE000806) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 192
Score = 159 bits (399), Expect = 2e-38
Identities = 82/196 (41%), Positives = 131/196 (66%), Gaps = 9/196 (4%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
+++G++ LQGDVSEH++ T ++++G+ E + ++ E+ V AIII GGEST I RL
Sbjct: 2 IRIGILALQGDVSEHLEMTRRTVEEMGIDAEVVRVRTAEEASTVDAIIISGGESTVIGRL 61
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
M++TG+ + + I + PVMGTCAG+++L+ E EQ L ++D++V RNA+GRQ
Sbjct: 62 MEETGIKDVI---IREKKPVMGTCAGMVLLADE---TDYEQPLLGLIDMKVKRNAFGRQR 115
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
DSFE + + F G+FIRAP ++E + + V+ L+ L+D ++ V+ + L FHPE
Sbjct: 116 DSFEDEIDIL--GRKFHGIFIRAPAVLE-VGEGVEVLSELDDMIIAVKDGCNLALAFHPE 172
Query: 181 LTDDTRVHEYFLKKAL 196
L +DT +HEYF+K+ L
Sbjct: 173 LGEDTGLHEYFIKEVL 188
>sp|Q59055|YG61_METJA HYPOTHETICAL PROTEIN MJ1661 >gi|2128068|pir||C64507 hypothetical
protein homolog MJ1661 - Methanococcus jannaschii
>gi|1592241|gb|AAB99679.1| (U67606) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 186
Score = 158 bits (395), Expect = 5e-38
Identities = 90/197 (45%), Positives = 130/197 (65%), Gaps = 14/197 (7%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
M +GV+ +QGDV EH +A +KK G EA +K+ E L+ + A+IIPGGEST I +L
Sbjct: 1 MIIGVLAIQGDVEEHEEA----IKKAGY--EAKKVKRVEDLEGIDALIIPGGESTAIGKL 54
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
M+K GL E +K LP++GTCAG+++LS+ G Q LE++D+ V RNAYGRQV
Sbjct: 55 MKKYGLLEKIKN---SNLPILGTCAGMVLLSK---GTGINQILLELMDITVKRNAYGRQV 108
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
DSFE + D GVFIRAP + ++LSD V+ +A D++VGV+Q + L FHPE
Sbjct: 109 DSFEKEIEFK-DLGKVYGVFIRAPVVDKILSDDVEVIARDGDKIVGVKQGKYMALSFHPE 167
Query: 181 LTDD-TRVHEYFLKKAL 196
L++D +V++YF++ +
Sbjct: 168 LSEDGYKVYKYFVENCV 184
>gb|AAK40887.1| Glutamine amidotransferase, putative [Sulfolobus solfataricus]
Length = 200
Score = 154 bits (385), Expect = 7e-37
Identities = 88/196 (44%), Positives = 120/196 (60%), Gaps = 5/196 (2%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
MK+G+I QG EH A KL ++GE I +K P+ LK V +IIPGGESTTI +
Sbjct: 1 MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLV 60
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGA---TPEQRFLEVLDVRVNRNAYG 117
++ GL + +K+ I GLPV+GTCAG IML++EV A Q + +++ V RN YG
Sbjct: 61 AKRLGLLDELKEKITSGLPVLGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYG 120
Query: 118 RQVDSFEAPVRLS-FDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLE 176
RQ +SFEA V LS + VFIRAP I ++ + + LA L V E++N++
Sbjct: 121 RQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWG-KAQSLAELNGVTVFAEENNMLATT 179
Query: 177 FHPELTDDTRVHEYFL 192
FHPEL+D T +HEYFL
Sbjct: 180 FHPELSDTTSIHEYFL 195
>emb|CAB57729.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 200
Score = 154 bits (385), Expect = 7e-37
Identities = 88/196 (44%), Positives = 120/196 (60%), Gaps = 5/196 (2%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
MK+G+I QG EH A KL ++GE I +K P+ LK V +IIPGGESTTI +
Sbjct: 1 MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLV 60
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGA---TPEQRFLEVLDVRVNRNAYG 117
++ GL + +K+ I GLPV+GTCAG IML++EV A Q + +++ V RN YG
Sbjct: 61 AKRLGLLDELKEKITSGLPVLGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYG 120
Query: 118 RQVDSFEAPVRLS-FDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLE 176
RQ +SFEA V LS + VFIRAP I ++ + + LA L V E++N++
Sbjct: 121 RQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWG-KAQSLAELNGVTVFAEENNMLATT 179
Query: 177 FHPELTDDTRVHEYFL 192
FHPEL+D T +HEYFL
Sbjct: 180 FHPELSDTTSIHEYFL 195
>emb|CAC11158.1| (AL445063) hypothetical protein [Thermoplasma acidophilum]
Length = 203
Score = 152 bits (381), Expect = 2e-36
Identities = 89/195 (45%), Positives = 123/195 (62%), Gaps = 12/195 (6%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWL---KKPEQLKEVSAIIIPGGESTTI 57
M +GV+G QGDV EH+D LKKL + L K+ L+ V A+IIPGGESTTI
Sbjct: 1 MNIGVLGFQGDVQEHMDM----LKKLSRKNRDLTLTHVKRVIDLEHVDALIIPGGESTTI 56
Query: 58 SRLMQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYG 117
+L + GL++ + K +G+P+M TCAGLI++S+ R + +LDV + RNAYG
Sbjct: 57 YKLTLEYGLYDAIVKRSAEGMPIMATCAGLILVSKNT--NDERVRGMGLLDVTIRRNAYG 114
Query: 118 RQVDSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEF 177
RQV SFE + ++ F VFIRAP I + S + + L L+ + V V+Q N+IG+ F
Sbjct: 115 RQVMSFETDIEIN-GIGMFPAVFIRAPVIED--SGKTEVLGTLDGKPVIVKQGNVIGMTF 171
Query: 178 HPELTDDTRVHEYFL 192
HPELT DTR+HEYF+
Sbjct: 172 HPELTGDTRLHEYFI 186
>pir||G75405 probable amidotransferase HisH - Deinococcus radiodurans (strain
R1) >gi|6459120|gb|AAF10937.1|AE001982_11 (AE001982)
amidotransferase HisH, putative [Deinococcus
radiodurans]
Length = 196
Score = 152 bits (379), Expect = 4e-36
Identities = 87/195 (44%), Positives = 120/195 (60%), Gaps = 10/195 (5%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
M VGV+ LQG EH L++LG + L P L +S +I+PGGESTT+ RL
Sbjct: 1 MTVGVLALQGAFREH----RQRLEQLGAGVREVRL--PADLAGLSGLILPGGESTTMVRL 54
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPE---QRFLEVLDVRVNRNAYG 117
+ + GL+ P++ G + GTCAG I+L+REV+G +P Q L +LD+ V RNA+G
Sbjct: 55 LTEGGLWHPLRDFHAAGGALWGTCAGAIVLAREVMGGSPSLPPQPGLGLLDITVQRNAFG 114
Query: 118 RQVDSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEF 177
RQVDSF AP+ ++ D PF VFIRAP ++ + + LA L DR V+Q ++ F
Sbjct: 115 RQVDSFTAPLDIAGLDAPFPAVFIRAP-VITRVGPAARALATLGDRTAHVQQGRVLASAF 173
Query: 178 HPELTDDTRVHEYFL 192
HPELT+DTR+H FL
Sbjct: 174 HPELTEDTRLHRVFL 188
>emb|CAB70924.1| (AL137778) hypothetical protein SCL2.12c [Streptomyces coelicolor
A3(2)]
Length = 202
Score = 150 bits (375), Expect = 1e-35
Identities = 84/190 (44%), Positives = 118/190 (61%), Gaps = 8/190 (4%)
Query: 3 VGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRLMQ 62
+GV+ LQGDV EH+ A +A A +++PE+L EV +++PGGESTTIS+L
Sbjct: 7 IGVLALQGDVREHLVALAVA------DAVARPVRRPEELAEVDGLVLPGGESTTISKLAV 60
Query: 63 KTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQVDS 122
G+ +P++ + DG+PV GTCAG+IML+ ++L Q + +D+ V RNA+GRQ +S
Sbjct: 61 LFGVMDPLRARVRDGMPVYGTCAGMIMLADKILDPRSGQETVGGIDMIVRRNAFGRQNES 120
Query: 123 FEAPVRL-SFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPEL 181
FEA V + + EP GVFIRAP VE + + LA + +V V Q N + FHPEL
Sbjct: 121 FEAAVDVEGVEGEPVEGVFIRAP-WVESVGAAAEVLAEHDGHIVAVRQGNALATSFHPEL 179
Query: 182 TDDTRVHEYF 191
T D RVH F
Sbjct: 180 TGDHRVHRLF 189
>dbj|BAB03742.1| (AP001507) amidotransferase [Bacillus halodurans]
Length = 196
Score = 149 bits (373), Expect = 2e-35
Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 9/193 (4%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
+K+GV+ LQG V EH+ L+ GV E +KK EQL+++ ++ PGGESTT+ RL
Sbjct: 2 VKIGVLALQGAVREHVRC----LEAPGV--EVSIVKKVEQLEDLDGLVFPGGESTTMRRL 55
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
+ K G FEP+K G PV GTCAGLI+++ + G + LE++D+ V RNA+GRQ
Sbjct: 56 IDKYGFFEPLKAFAAQGKPVFGTCAGLILMATRIDG--EDHGHLELMDMTVQRNAFGRQR 113
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
+SFE + + + VFIRAP I E + V L+ D +V Q +++G FHPE
Sbjct: 114 ESFETDLIVEGVGDDVRAVFIRAPLIQE-VGQNVDVLSKFGDEIVVARQGHLLGCSFHPE 172
Query: 181 LTDDTRVHEYFLK 193
LTDD R H+YF++
Sbjct: 173 LTDDRRFHQYFVQ 185
>pir||C70570 hypothetical protein Rv2604c - Mycobacterium tuberculosis (strain
H37RV) >gi|3261764|emb|CAB08636.1| (Z95387) hypothetical
protein Rv2604c [Mycobacterium tuberculosis]
Length = 198
Score = 145 bits (362), Expect = 4e-34
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 10/194 (5%)
Query: 2 KVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRLM 61
+VGV+ LQGD EH+ AL++ G E + +++ ++L V A++IPGGESTT+S L+
Sbjct: 5 RVGVLALQGDTREHL----AALRECGA--EPMTVRRRDELDAVDALVIPGGESTTMSHLL 58
Query: 62 QKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVL--GATPEQRF-LEVLDVRVNRNAYGR 118
L P++ + DGLP G+CAG+I+L+ E+L GA Q L +++ V RNA+G
Sbjct: 59 LDLDLLGPLRARLADGLPAYGSCAGMILLASEILDAGAAGRQALPLRAMNMTVRRNAFGS 118
Query: 119 QVDSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFH 178
QVDSFE + + D+P VFIRAP VE + D V+ LA +V V Q ++ FH
Sbjct: 119 QVDSFEGDIEFAGLDDPVRAVFIRAP-WVERVGDGVQVLARAAGHIVAVRQGAVLATAFH 177
Query: 179 PELTDDTRVHEYFL 192
PE+T D R+H+ F+
Sbjct: 178 PEMTGDRRIHQLFV 191
>pir||S72721 amidotransferase hisH homolog - Mycobacterium leprae
>gi|466810|gb|AAA17085.1| (U00011) hisH; B1177_C1_149
[Mycobacterium leprae]
Length = 219
Score = 144 bits (359), Expect = 8e-34
Identities = 82/194 (42%), Positives = 118/194 (60%), Gaps = 10/194 (5%)
Query: 2 KVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRLM 61
+VGV+ LQGD EH+ A L++ G +++ +++ +L EV A++IPGGESTTIS L+
Sbjct: 26 RVGVLALQGDTREHLTA----LREAGA--DSMPVRRRGELDEVDALVIPGGESTTISHLL 79
Query: 62 QKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGA---TPEQRFLEVLDVRVNRNAYGR 118
L EP++ + DGLP G C G+I+L+ E+L A E L +D+ V RNA+GR
Sbjct: 80 LDCELLEPLRARLADGLPAYGACTGMILLASEILDAGVCGREALPLGAIDITVRRNAFGR 139
Query: 119 QVDSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFH 178
QVDSFE + + +P VFIRAP VE D V+ LA V V Q +++ FH
Sbjct: 140 QVDSFEGDIGFAGLVDPVRAVFIRAP-WVERAGDGVQVLAQAAGHAVAVRQGSMLATAFH 198
Query: 179 PELTDDTRVHEYFL 192
PE+T D R+H+ F+
Sbjct: 199 PEMTSDRRIHQLFV 212
>dbj|BAB08237.1| (AB011483) amidotransferase hisH-like protein [Arabidopsis
thaliana]
Length = 240
Score = 139 bits (348), Expect = 2e-32
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 27/211 (12%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
M VGV+ LQG +EHI AL++LGV G + ++K +QL VS++IIPGGESTT+++L
Sbjct: 1 MTVGVLALQGSFNEHI----AALRRLGVQG--VEIRKADQLLTVSSLIIPGGESTTMAKL 54
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLS-REVLGATPEQRFLEVLDVRVNRNAYGRQ 119
+ LF +++ ++ G PV GTCAGLI L+ R V G Q + LD V+RN +G Q
Sbjct: 55 AEYHNLFPALREFVKMGKPVWGTCAGLIFLADRAVEGG---QELVGGLDCTVHRNFFGSQ 111
Query: 120 VDSFEAPV---RLSFDD---EPFIGVFIRAPRI------VELLSDRVKPL----AWLEDR 163
+ SFEA + +L+ + E + GVFIRAP + VE+L+D P A E +
Sbjct: 112 IQSFEADILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKEDALPETK 171
Query: 164 V-VGVEQDNIIGLEFHPELTDDTRVHEYFLK 193
V V V+Q N++ FHPELT DTR H YF+K
Sbjct: 172 VIVAVKQGNLLATAFHPELTADTRWHSYFIK 202
>gb|AAG20639.1| (AE005133) imidazoleglycerol-phosphate synthase; HisH1
[Halobacterium sp. NRC-1]
Length = 203
Score = 139 bits (348), Expect = 2e-32
Identities = 77/189 (40%), Positives = 111/189 (57%), Gaps = 3/189 (1%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
+ GV+ +QGDVSEH A A G + ++ + E +++PGGEST ISRL
Sbjct: 3 LTAGVVAVQGDVSEHAAAIRRAADAHGQPADVREIRTAGVVPECDVLLLPGGESTAISRL 62
Query: 61 MQKTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQV 120
+ + G+ ++ + G P++ TCAGLI+ S + E L+VLDV V+RNA+GRQV
Sbjct: 63 LDREGIDAEIRSHVAAGKPLLATCAGLIVSSTDANDDRVET--LDVLDVTVDRNAFGRQV 120
Query: 121 DSFEAPVRLSFDDEPFIGVFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPE 180
DSFEAP+ + +PF VFIRAP I E+ +D +W + R V + ++ FHPE
Sbjct: 121 DSFEAPLDVDGLADPFPAVFIRAPVIDEVGADATVLASW-DGRPVAIRDGPVVATSFHPE 179
Query: 181 LTDDTRVHE 189
LT D R+HE
Sbjct: 180 LTADVRLHE 188
>pir||C72782 hypothetical protein APE0244 - Aeropyrum pernix (strain K1)
>gi|5103636|dbj|BAA79157.1| (AP000058) 186aa long
hypothetical protein [Aeropyrum pernix]
Length = 186
Score = 139 bits (347), Expect = 2e-32
Identities = 80/176 (45%), Positives = 112/176 (63%), Gaps = 8/176 (4%)
Query: 25 KLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRLMQKTGLFEPVKKLIEDGLPVMGTC 84
+LGV GEA+ +KKPE LK + +IIPGGESTTI L ++ G+ EP+++ + +GLP MGTC
Sbjct: 8 RLGVHGEAVVVKKPEDLKGLDGVIIPGGESTTIGILAKRLGVLEPLREQVLNGLPAMGTC 67
Query: 85 AGLIMLS---REVLGATPEQRFLEVLDVRVNRNAYGRQVDSFEAPVRLSFDDEPFIGVFI 141
AG I+L+ R+ + Q L V+ V V RN +GRQ +SFEA + + D F GVFI
Sbjct: 68 AGAIILAGKVRDKVVGEKSQPLLGVMRVEVVRNFFGRQRESFEADLEIEGLDGRFRGVFI 127
Query: 142 RAPRIVELLSDRVKPLAWLE---DRV-VGVEQDNIIGLEFHPELTDDTRVHEYFLK 193
R+P I S + ++WL+ RV V Q ++ FHPELT DTR+HE +L+
Sbjct: 128 RSPAITAAESP-ARIISWLDYNGQRVGVAAVQGPLLATSFHPELTGDTRLHELWLR 182
>pir||T50149 conserved hypothetical protein SPAC222.08c [imported] - fission
yeast (Schizosaccharomyces pombe)
>gi|6433993|emb|CAB60700.1| (AL132798) conserved
hypothetical protein [Schizosaccharomyces pombe]
Length = 234
Score = 119 bits (296), Expect = 2e-26
Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 21/208 (10%)
Query: 2 KVGVIGLQGDVSEHIDATNLALKKLGVSGEAIW-LKKPEQLKEVSAIIIPGGESTTISRL 60
++GV+ LQG EHI+ N + G + +K + + + +IIPGGESTTI +L
Sbjct: 23 RIGVLALQGAFIEHINIMN------SIDGVISFPVKTAKDCENIDGLIIPGGESTTIGKL 76
Query: 61 MQ-KTGLFEPVKKLIEDGLPVMGTCAGLIMLSREVLGAT-PEQRFLEVLDVRVNRNAYGR 118
+ L + ++ L++ GLP+ GTCAG+I+LS++ G P+ L +D+ V RN +G
Sbjct: 77 INIDEKLRDRLEHLVDQGLPIWGTCAGMILLSKKSRGGKFPDPYLLRAMDIEVTRNYFGP 136
Query: 119 QVDSFEAPVRLSFD-----DEP---FIGVFIRAPRIVELLSDRVKPLAWL----EDRVVG 166
Q SF + ++ EP F FIRAP +LSD + LA + +V
Sbjct: 137 QTMSFTTDITVTESMQFEATEPLHSFSATFIRAPVASTILSDDINVLATIVHEGNKEIVA 196
Query: 167 VEQDNIIGLEFHPELTDDTRVHEYFLKK 194
VEQ +G FHPELT D R HE+++K+
Sbjct: 197 VEQGPFLGTSFHPELTADNRWHEWWVKE 224
>sp|P45294|YG48_HAEIN HYPOTHETICAL PROTEIN HI1648 >gi|1074878|pir||G64173 hypothetical
protein HI1648 - Haemophilus influenzae (strain Rd KW20)
>gi|1574496|gb|AAC23295.1| (U32837) conserved
hypothetical protein [Haemophilus influenzae Rd]
Length = 175
Score = 115 bits (286), Expect = 3e-25
Identities = 67/176 (38%), Positives = 108/176 (61%), Gaps = 14/176 (7%)
Query: 23 LKKLGV-SGEAIWLKKPEQ-LKEVSAIIIPGGESTTISRLMQKTGLFEPVKKLIEDGLPV 80
L+KLG+ S E LK +Q ++S +I+PGGEST I +L+++ + EP+K+ I G PV
Sbjct: 2 LEKLGIESVELRNLKNFQQHYSDLSGLILPGGESTAIGKLLRELYMLEPIKQAISSGFPV 61
Query: 81 MGTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQVDSFEAPVRLSFDDEPFIG-- 138
GTCAGLI+L++E+ + ++ +D+ V RNAYGRQ+ SF D +G
Sbjct: 62 FGTCAGLILLAKEI--TSQKESHFGTMDIVVERNAYGRQLGSFYTEA-----DCKGVGKI 114
Query: 139 --VFIRAPRIVELLSDRVKPLAWLEDRVVGVEQDNIIGLEFHPELTDDTRVHEYFL 192
FIR P I+ + +V LA + +++V ++ N++ FHPELT++ +H+YF+
Sbjct: 115 PMTFIRGP-IISSVGKKVNILATVNNKIVAAQEKNMLVTSFHPELTNNLSLHKYFI 169
>gb|AAG09049.1|AF294268_1 (AF294268) pyridoxine synthesis protein PDX2 [Cercospora
nicotianae]
Length = 278
Score = 115 bits (285), Expect = 4e-25
Identities = 70/162 (43%), Positives = 94/162 (57%), Gaps = 7/162 (4%)
Query: 1 MKVGVIGLQGDVSEHIDATNLALKKL----GVSGEAIWLKKPEQLKEVSAIIIPGGESTT 56
+ VGV+ LQG EHI A L GV I ++ PEQL A+I+PGGEST
Sbjct: 10 LTVGVLALQGAFIEHITLLRQAAPALTAGYGVHFTFIEVRTPEQLDRCDALILPGGESTA 69
Query: 57 ISRLMQKTGLFEPVKKLIE-DGLPVMGTCAGLIMLSREV-LGATPEQRFLEVLDVRVNRN 114
IS + ++ GL EP++ ++ P GTCAGLI+L+ E Q + LDVRV RN
Sbjct: 70 ISLIAERCGLLEPLRNFVKWQRRPTWGTCAGLILLAEEANKSKATGQELIGGLDVRVQRN 129
Query: 115 AYGRQVDSFEAPVRLSF-DDEPFIGVFIRAPRIVELLSDRVK 155
+GRQV+SFEA ++L F +PF VFIRAP + +L+ K
Sbjct: 130 YFGRQVESFEAALQLPFLGPDPFHSVFIRAPVVENILASSAK 171
>gi|6323742 Sno1p [Saccharomyces cerevisiae] >gi|2501684|sp|Q03144|YMY5_YEAST
HYPOTHETICAL 24.9 KD PROTEIN IN CTF13-SNZ1 INTERGENIC
REGION >gi|1078512|pir||S55081 hypothetical protein
YMR095c - yeast (Saccharomyces cerevisiae)
>gi|854432|emb|CAA89896.1| (Z49807) unknown
[Saccharomyces cerevisiae]
Length = 224
Score = 113 bits (280), Expect = 2e-24
Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 13/205 (6%)
Query: 3 VGVIGLQGDVSEHIDATN--LALKKLGVSGEAIWLKKPEQLKEVSAIIIPGGESTTISRL 60
+GV+ LQG EH + LA G+ E +K PE L + A+IIPGGEST++S +
Sbjct: 16 IGVLALQGAFLEHTNHLKRCLAENDYGIKIEIKTVKTPEDLAQCDALIIPGGESTSMSLI 75
Query: 61 MQKTGLFEPVKKLIEDGLPVM-GTCAGLIMLSREVLGATPEQRFLEVLDVRVNRNAYGRQ 119
Q+TGL+ + + + + V+ GTCAGLI LS ++ + + L VL V V RNA+GRQ
Sbjct: 76 AQRTGLYPCLYEFVHNPEKVVWGTCAGLIFLSAQLENESALVKTLGVLKVDVRRNAFGRQ 135
Query: 120 VDSFEAPVRLSF---DDEPFIGVFIRAPRIVELLSD-RVKPLAWL----EDRVVGVEQD- 170
SF S + F FIRAP I +L VK L L +D VV Q+
Sbjct: 136 AQSFTQKCDFSNFIPGCDNFPATFIRAPVIERILDPIAVKSLYELPVNGKDVVVAATQNH 195
Query: 171 NIIGLEFHPELTD-DTRVHEYFLKK 194
NI+ FHPEL D DTR H++F+++
Sbjct: 196 NILVTSFHPELADSDTRFHDWFIRQ 220
>gi|6321048 member of the stationary phase-induced gene family; Sno3p
[Saccharomyces cerevisiae]
>gi|1175964|sp|P43544|YFG0_YEAST HYPOTHETICAL 25.1 KDA
PROTEIN IN SNZ3-COS4 INTERGENIC REGION
>gi|1084718|pir||S56195 probable membrane protein
YFL060c - yeast (Saccharomyces cerevisiae)
>gi|836695|dbj|BAA09181.1| (D50617) YFL060C
[Saccharomyces cerevisiae]
Length = 222
Score = 99.5 bits (244), Expect = 3e-20
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 26/214 (12%)
Query: 3 VGVIGLQGDVSEHIDATNLAL--------KKLGVSGEAIWLKKPEQLKEVSAIIIPGGES 54
+GV+ LQG EH+ + KKL V + +K QL + A+IIPGGES
Sbjct: 5 IGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSV----MTVKDKNQLAQCDALIIPGGES 60
Query: 55 TTISRLMQKTGLFEPVKKLIEDGLPVM-GTCAGLIMLSREVLGATPEQRFLEVLDVRVNR 113
T +S + ++TG ++ + + + V GTCAGLI +S+++ + L +L V+V R
Sbjct: 61 TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGLIYISQQLSNEAKLVKTLNLLKVKVKR 120
Query: 114 NAYGRQVDSFEAPVRLSF---DDEPFIGVFIRAPRIVELLS-DRVKPLAWLEDR------ 163
NA+GRQ S S F FIRAP I E+L + V+ L L+ +
Sbjct: 121 NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE 180
Query: 164 --VVGVEQDNIIGLEFHPELTD-DTRVHEYFLKK 194
V +++NI+ FHPEL + D R H++F+++
Sbjct: 181 LIVAAKQKNNILATSFHPELAENDIRFHDWFIRE 214
>gi|6323995 Induced in stationary phase; Sno2p [Saccharomyces cerevisiae]
>gi|1730656|sp|P53823|YN74_YEAST HYPOTHETICAL 25.2 KDA
PROTEIN IN SNZ2-COS1 INTERGENIC REGION
>gi|2132791|pir||S63320 probable membrane protein
YNL334c - yeast (Saccharomyces cerevisiae)
>gi|1302459|emb|CAA96268.1| (Z71610) ORF YNL334c
[Saccharomyces cerevisiae]
Length = 222
Score = 98.3 bits (241), Expect = 6e-20
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 26/214 (12%)
Query: 3 VGVIGLQGDVSEHIDATNLAL--------KKLGVSGEAIWLKKPEQLKEVSAIIIPGGES 54
+GV+ LQG EH+ + KKL V + +K QL + A+IIPGGES
Sbjct: 5 IGVLALQGAFIEHVRHVEKCIVENRDFYEKKLSV----MTVKDKNQLAQCDALIIPGGES 60
Query: 55 TTISRLMQKTGLFEPVKKLIEDGLPVM-GTCAGLIMLSREVLGATPEQRFLEVLDVRVNR 113
T +S + ++TG ++ + + + V GTCAG+I +S+++ + L +L V+V R
Sbjct: 61 TAMSLIAERTGFYDDLYAFVHNPSKVTWGTCAGMIYISQQLSNEEKLVKTLNLLKVKVKR 120
Query: 114 NAYGRQVDSFEAPVRLSF---DDEPFIGVFIRAPRIVELLS-DRVKPLAWLEDR------ 163
NA+GRQ S S F FIRAP I E+L + V+ L L+ +
Sbjct: 121 NAFGRQAQSSTRICDFSNFIPHCNDFPATFIRAPVIEEVLDPEHVQVLYKLDGKDNGGQE 180
Query: 164 --VVGVEQDNIIGLEFHPELTD-DTRVHEYFLKK 194
V +++NI+ FHPEL + D R H++F+++
Sbjct: 181 LIVAAKQKNNILATSFHPELAENDIRFHDWFIRE 214
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.141 0.403
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72784936
Number of Sequences: 2977
Number of extensions: 2879971
Number of successful extensions: 7160
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7081
Number of HSP's gapped (non-prelim): 25
length of query: 196
length of database: 189,106,746
effective HSP length: 54
effective length of query: 142
effective length of database: 156,788,448
effective search space: 22263959616
effective search space used: 22263959616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)