BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0543 (PAB0543) DE:ABC TRANSPORTER INTEGRAL MEMBRANE PROTEIN
(533 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75124 abc transporter integral membrane protein PAB0543 - ... 1017 0.0
pir||B71007 hypothetical protein PH1352 - Pyrococcus horikoshii ... 758 0.0
pir||T35451 ABC transporter integral membrane protein - Streptom... 290 3e-77
gb|AAG20487.1| (AE005121) sulfate transport system permease prot... 278 1e-73
pir||G75267 ABC transporter, permease protein, CysTW family - De... 208 2e-52
pir||A71361 probable thiamin ABC transporter, permease protein -... 184 2e-45
pir||A81958 probable permease NMA0414 [imported] - Neisseria men... 175 1e-42
pir||E81015 ABC transporter, permease protein NMB2026 [imported]... 174 3e-42
pir||D82063 probable thiamin ABC transporter, permease protein V... 153 6e-36
gb|AAF68424.1|AF237938_1 (AF237938) putative thiamin ABC transpo... 147 3e-34
sp|P44985|THIP_HAEIN THIAMINE TRANSPORT SYSTEM PERMEASE PROTEIN ... 146 4e-34
pir||H82428 iron(III) ABC transporter, permease protein VCA0686 ... 143 5e-33
sp|Q44123|AFUB_ACTPL FERRIC TRANSPORT SYSTEM PERMEASE PROTEIN AF... 143 6e-33
pir||S40583 hypothetical protein - Escherichia coli >gi|216487|d... 138 2e-31
sp|P31549|YABK_ECOLI HYPOTHETICAL 59.6 KD PROTEIN IN ARAC-TBPA I... 138 2e-31
pir||F72555 probable molybdenum transport system permease protei... 134 2e-30
pir||E83060 iron (III)-transport system permease HitB PA4688 [im... 132 1e-29
pir||H64049 afuB protein homolog - Haemophilus influenzae (strai... 126 5e-28
sp|Q57341|AFUB_HAEIN PUTATIVE FERRIC TRANSPORT SYSTEM PERMEASE P... 126 5e-28
pir||G82440 ABC transporter, permease protein VCA0601 [imported]... 125 9e-28
gb|AAG19354.1| (AE005030) iron transporter-like protein; SfuB [H... 124 2e-27
sp|P55452|Y4FN_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 119 7e-26
dbj|BAB04233.1| (AP001508) iron (III) transport system (permease... 117 3e-25
pir||T34596 probable membrane protein - Streptomyces coelicolor ... 115 1e-24
pir||G81929 probable iron-uptake permease inner membrane protein... 115 2e-24
pir||T10887 iron utilization protein B - Haemophilus influenzae ... 113 5e-24
pir||T36640 probable ABC-type transport system membrane protein ... 109 8e-23
sp|P16702|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 109 8e-23
sp|P71338|HITB_HAEIN IRON(III)-TRANSPORT SYSTEM PERMEASE PROTEIN... 108 2e-22
pir||E81435 probable iron-uptake ABC transport system permease p... 107 4e-22
pir||B82310 sulfate ABC transporter, permease protein VC0540 [im... 104 3e-21
pir||H83568 probable permease of ABC transporter PA0606 [importe... 104 3e-21
gi|11499198 spermidine/putrescine ABC transporter, permease prot... 104 3e-21
gi|10954681 probable mikimopine transporter gene~similar to motC... 102 1e-20
gb|AAC21774.1| (U32695) iron(III) ABC transporter, permease prot... 101 2e-20
gb|AAB95373.1| (U75349) putative permease BitE [Brachyspira hyod... 101 3e-20
pir||A82310 sulfate ABC transporter, permease protein VC0539 [im... 101 3e-20
sp|P16701|CYST_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 100 4e-20
gb|AAB95374.1| (U75349) putative permease BitF [Brachyspira hyod... 100 7e-20
emb|CAA63862.1| (X94148) putative inner membrane protein [Bacill... 99 9e-20
sp|P27370|CYSW_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 98 3e-19
pir||D82302 iron(III) ABC transporter, permease protein VC0609 [... 98 3e-19
pir||T46951 probable membrane component of 2-aminoethylphosphona... 95 2e-18
pir||H82994 probable permease of ABC iron transporter PA5216 [im... 95 2e-18
pir||F82694 ABC transporter sulfate permease XF1345 [imported] -... 94 4e-18
pir||C75613 probable molybdenum ABC transporter, permease protei... 94 5e-18
pir||E82201 spermidine/putrescine ABC transporter, permease prot... 94 5e-18
sp|P74547|CYSW_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 93 6e-18
pir||S77084 ABC-type transport protein sll0739 - Synechocystis s... 92 2e-17
gi|11466750 ORF288 [Marchantia polymorpha] >gi|126795|sp|P26246|... 91 3e-17
pir||T44855 molybdenum transport transmembrane protein modB [imp... 90 6e-17
emb|CAB53107.1| (AJ245645) sulfate transport permease protein [P... 90 6e-17
sp|P09834|MODB_ECOLI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 90 7e-17
pir||BVECHJ molybdenum transport protein modB - Escherichia coli... 89 1e-16
gb|AAB67296.1| (U59485) AttB [Agrobacterium tumefaciens] 89 1e-16
gi|11466435 probable transport protein [Mesostigma viride] >gi|7... 89 1e-16
pir||B70683 probable cysT - Mycobacterium tuberculosis (strain H... 89 2e-16
pir||G81875 sulfate ABC transporter, inner membrane protein NMA1... 89 2e-16
gb|AAB67295.1| (U59485) AttA2 [Agrobacterium tumefaciens] 88 2e-16
gi|11497713 sulfate ABC transporter, permease protein (cysT) [Ar... 88 2e-16
pir||C81147 sulfate ABC transporter, permease protein NMB0880 [i... 88 2e-16
pir||T46952 probable membrane component of 2-aminoethylphosphona... 88 3e-16
sp|P31136|POTI_ECOLI PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEI... 87 5e-16
pir||C72261 spermidine/putrescine ABC transporter, permease prot... 87 5e-16
dbj|BAB06847.1| (AP001517) sulfate ABC transporter (permease) [B... 87 6e-16
pir||G71296 probable spermidine/putrescine ABC transporter, perm... 87 6e-16
pir||A81876 sulfate ABC transporter, inner membrane protein NMA1... 87 6e-16
pir||A82426 molybdenum ABC transporter, permease protein VCA0725... 87 6e-16
sp|Q01895|CYST_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 86 8e-16
pir||H70179 spermidine/putrescine ABC transporter, permease prot... 86 8e-16
sp|P77505|YDCV_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 86 1e-15
pir||F70308 Molybdenum transport system permease - Aquifex aeoli... 86 1e-15
pir||T45007 probable ABC-transport protein [imported] - Halofera... 86 1e-15
gi|11467877 probable transport protein [Nephroselmis olivacea] >... 86 1e-15
gi|10955068 agtC [Agrobacterium tumefaciens] >gi|6689866|gb|AAF2... 86 1e-15
pir||E83605 probable permease of ABC transporter PA0324 [importe... 86 1e-15
pir||F83194 polyamine transport protein PotC PA3609 [imported] -... 86 1e-15
pir||D81147 sulfate ABC transporter, permease protein NMB0881 [i... 85 2e-15
pir||G82694 ABC transporter sulfate permease XF1346 [imported] -... 85 2e-15
pir||B83610 sulfate transport protein CysT PA0282 [imported] - P... 85 2e-15
sp|P45322|MODB_HAEIN MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 84 3e-15
gb|AAG19864.1| (AE005071) sulfate transport system permease prot... 84 3e-15
gi|7524888 sulfate transport system permease protein [Chlorella ... 84 4e-15
sp|P21409|SFUB_SERMA IRON(III)-TRANSPORT SYSTEM PERMEASE PROTEIN... 83 5e-15
pir||A81449 probable molybdenum transport system permease protei... 83 5e-15
gi|10954680 probable mikimopine transporter gene~similar to potC... 83 5e-15
pir||QRSEUB sfuB protein - Serratia marcescens 83 7e-15
pir||G64470 sulfate/thiosulfate transport protein homolog - Meth... 83 7e-15
gb|AAA83839.1| (M16182) unknown protein [Escherichia coli] 83 9e-15
pir||A83608 polyamine transport protein PotI PA0304 [imported] -... 82 1e-14
pir||F83605 probable permease of ABC transporter PA0325 [importe... 82 1e-14
sp|P45169|POTC_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERM... 81 3e-14
sp|P95156|MODB_MYCTU MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 81 3e-14
pir||D69223 anion transport system permease protein - Methanobac... 81 3e-14
sp|P27367|CYST_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 81 4e-14
pir||F81344 probable ABC transport system permease Cj0731 [impor... 81 4e-14
gb|AAC27497.1| (AF077856) PotC [Actinobacillus actinomycetemcomi... 80 5e-14
pir||A72786 probable transport system permease protein APE0270 -... 80 5e-14
dbj|BAB06848.1| (AP001517) sulfate ABC transporter (permease) [B... 80 5e-14
sp|P23859|POTC_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERM... 80 6e-14
pir||I64117 spermidine/putrescine transport system permease potC... 80 6e-14
pir||B72261 spermidine/putrescine ABC transporter, permease prot... 80 6e-14
pir||S31095 cysT protein - Synechocystis sp. (PCC 6803) (fragmen... 80 8e-14
gb|AAK41295.1| Sulfate ABC transporter, permease protein [Sulfol... 79 1e-13
sp|P37731|MODC_AZOVI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 79 1e-13
pir||H83620 probable permease of ABC transporter PA0205 [importe... 79 1e-13
gb|AAG20068.1| (AE005086) spermidine/putrescine ABC transporter ... 78 2e-13
pir||F75203 anion transport system permease protein PAB0102 - Py... 78 2e-13
gi|11499199 spermidine/putrescine ABC transporter, permease prot... 78 3e-13
pir||H71236 probable transport system protein - Pyrococcus horik... 78 3e-13
sp|P45170|POTB_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERM... 77 4e-13
gb|AAC27496.1| (AF077856) PotB [Actinobacillus actinomycetemcomi... 77 4e-13
sp|P18795|NIFC_CLOPA PROBABLE TRANSPORT SYSTEM PERMEASE PROTEIN ... 77 5e-13
pir||S76051 hypothetical protein - Synechocystis sp. (strain PCC... 77 5e-13
gi|10955067 agtD [Agrobacterium tumefaciens] >gi|6689867|gb|AAF2... 77 5e-13
pir||E81179 spermidine/putrescine ABC transporter, permease prot... 76 7e-13
pir||D70952 probable sugar - Mycobacterium tuberculosis (strain ... 76 9e-13
dbj|BAA36746.1| (AB016764) potB [Escherichia coli] 76 9e-13
pir||A81927 probable polyamine permease inner membrane protein N... 76 9e-13
gi|10955063 motC [Agrobacterium tumefaciens] >gi|1381802|gb|AAC1... 76 1e-12
pir||B64579 molybdenum ABC transporter, permease protein - Helic... 76 1e-12
pir||G82932 spermidine/putrescine transport system permease UU10... 76 1e-12
sp|P23860|POTB_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERM... 75 2e-12
pir||H83607 polyamine transport protein PotH PA0303 [imported] -... 75 2e-12
gb|AAC12801.1| (U67851) ChtJ [Agrobacterium sp.] >gi|3153870|gb|... 75 2e-12
emb|CAB59590.1| (AL132662) putative sugar transporter inner memb... 75 2e-12
pir||A83610 sulfate transport protein CysW PA0281 [imported] - P... 75 2e-12
gb|AAG35386.1| (AF030414) ModB [Gluconacetobacter diazotrophicus] 75 2e-12
sp|Q08382|MODB_RHOCA MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 75 2e-12
gi|10955062 motD [Agrobacterium tumefaciens] >gi|1381801|gb|AAC1... 75 3e-12
sp|P76224|YNJC_ECOLI HYPOTHETICAL 56.2 KD PROTEIN IN XTHA-GDHA I... 75 3e-12
pir||C64935 hypothetical protein b1755 - Escherichia coli (strai... 74 5e-12
pir||F69162 sulfate transport system permease protein - Methanob... 74 5e-12
pir||F83240 probable permease of ABC transporter PA3252 [importe... 74 5e-12
gb|AAK42825.1| ABC transporter, permease [Sulfolobus solfataricus] 73 8e-12
pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (s... 73 8e-12
dbj|BAB04964.1| (AP001511) unknown conserved protein in others [... 73 8e-12
pir||F71934 molybdate ABC transporter, permease - Helicobacter p... 73 1e-11
pir||D82201 spermidine/putrescine ABC transporter, permease prot... 73 1e-11
pir||G83240 probable permease of ABC transporter PA3253 [importe... 73 1e-11
pir||E75187 sugar abc transporter, permease protein PAB2335 - Py... 72 1e-11
pir||E81344 probable ABC transport system permease Cj0730 [impor... 72 1e-11
pir||T35801 probable polyamine ABC-transporter integral membrane... 72 2e-11
pir||C72279 sugar ABC transporter, permease protein - Thermotoga... 72 2e-11
pir||A81301 probable anion-uptake ABC-transport system permease ... 72 2e-11
gb|AAC12802.1| (U67851) ChtK [Agrobacterium sp.] >gi|3153871|gb|... 71 2e-11
pir||C72756 probable multiple sugar-binding transport system per... 71 2e-11
emb|CAB94619.1| (AL359214) putative sugar transporter integral m... 71 3e-11
dbj|BAA35947.1| (D90748) Spermidine/putrescine transport system ... 71 4e-11
sp|P75057|POTC_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERM... 71 4e-11
pir||G70179 spermidine/putrescine ABC transporter, permease prot... 70 5e-11
pir||T47063 hypothetical protein [imported] - Yersinia pestis >g... 70 7e-11
pir||G83620 probable permease of ABC transporter PA0204 [importe... 70 7e-11
pir||G72690 probable spermidine/putrescine transport system perm... 69 9e-11
>pir||F75124 abc transporter integral membrane protein PAB0543 - Pyrococcus
abyssi (strain Orsay) >gi|5458222|emb|CAB49711.1|
(AJ248285) ABC TRANSPORTER INTEGRAL MEMBRANE PROTEIN
[Pyrococcus abyssi]
Length = 533
Score = 1017 bits (2601), Expect = 0.0
Identities = 533/533 (100%), Positives = 533/533 (100%)
Query: 1 MKSDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFT 60
MKSDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFT
Sbjct: 1 MKSDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFT 60
Query: 61 FVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG 120
FVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG
Sbjct: 61 FVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG 120
Query: 121 PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT
Sbjct: 121 PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
Query: 181 LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALI 240
LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALI
Sbjct: 181 LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALI 240
Query: 241 QLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFA 300
QLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFA
Sbjct: 241 QLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFA 300
Query: 301 VIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLAR 360
VIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLAR
Sbjct: 301 VIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLAR 360
Query: 361 VIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFA 420
VIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFA
Sbjct: 361 VIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFA 420
Query: 421 FRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATT 480
FRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATT
Sbjct: 421 FRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATT 480
Query: 481 YMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERIGEEVW 533
YMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERIGEEVW
Sbjct: 481 YMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERIGEEVW 533
>pir||B71007 hypothetical protein PH1352 - Pyrococcus horikoshii
>gi|3257775|dbj|BAA30458.1| (AP000006) 559aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 559
Score = 758 bits (1936), Expect = 0.0
Identities = 369/532 (69%), Positives = 449/532 (84%)
Query: 2 KSDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTF 61
+S R+ +S+ L LLL +LFY+P +R++SLG S LL+VL D YYRRVI+FTF
Sbjct: 28 QSVMRVRVSIFTILAFSSFLLLFTLFYIPFLRILSLGLSFQGLLAVLRDSYYRRVISFTF 87
Query: 62 VQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGP 121
QA+LST+ TL V PGAYV SHYDFPGKR L+++ITVPFVMPSV+VALGFII+FGK GP
Sbjct: 88 GQAVLSTVLTLIVSFPGAYVLSHYDFPGKRTLKAIITVPFVMPSVMVALGFIILFGKQGP 147
Query: 122 LGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITL 181
L ILY+WKAI+LAH+FYNYPVVVR+++S+WERINPHY+EAA+SLGAKGF +FRK+TL
Sbjct: 148 FSWLNILYSWKAIVLAHIFYNYPVVVRIVSSAWERINPHYEEAALSLGAKGFTLFRKVTL 207
Query: 182 PLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQ 241
PLL PSIL++SL+TF FCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLAL+Q
Sbjct: 208 PLLFPSILLSSLMTFIFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALLQ 267
Query: 242 LTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAV 301
L + +LMY+Y K+ YSREEEQ+V + +K+L L GI IL YFI + + I+ PLFAV
Sbjct: 268 LVFNFLLMYLYIKIASAYSREEEQKVNVRRKKLTLSPGGILILSYFILIFLLILGPLFAV 327
Query: 302 IYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARV 361
+ MFN + S EW+RRAFS+EYNPMFGTSSL +LNTL+FGF+AV I+++L+LPLA +
Sbjct: 328 FLDSFMFNGKFSFEWYRRAFSQEYNPMFGTSSLFALLNTLRFGFLAVGISLLLSLPLAYL 387
Query: 362 IAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAF 421
R+K RGK +++V TLPLASS V+LGLGYL+ FR + +YGHW+LIALAHATVAYPF F
Sbjct: 388 SIRKKLRGKSIIDVLVTLPLASSPVILGLGYLITFRSSPIYGHWILIALAHATVAYPFVF 447
Query: 422 RTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTY 481
RT+S++I+K+KKNL EA+LTLGA+EA SF+++ELPLI G+LVAS+F+FAIS AELATTY
Sbjct: 448 RTVSLAIQKVKKNLSEAALTLGANEAYSFMRIELPLIKGGVLVASVFAFAISVAELATTY 507
Query: 482 MLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERIGEEVW 533
MLA PE TTLTLAIYKFISSRQFGPASALSV+LM ISM+SFLLIERIGEEVW
Sbjct: 508 MLAKPEYTTLTLAIYKFISSRQFGPASALSVILMAISMLSFLLIERIGEEVW 559
>pir||T35451 ABC transporter integral membrane protein - Streptomyces coelicolor
>gi|3319739|emb|CAA19905.1| (AL031035) ABC transporter
integral membrane protein [Streptomyces coelicolor
A3(2)]
Length = 553
Score = 290 bits (734), Expect = 3e-77
Identities = 183/535 (34%), Positives = 292/535 (54%), Gaps = 24/535 (4%)
Query: 12 RKGLILIPMLLLLSLFYVPMVRVISLG------FSLTSLLSVLSDEYYRRVIAFTFVQAL 65
R GL+ +P+ F P+ +++ G + L + VL+ R V+ FT QAL
Sbjct: 17 RLGLMAVPVAFFAVFFAYPVAAIVARGLKTDGVWQLGRIGDVLAQSDVRHVLWFTTWQAL 76
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG---PL 122
ST TL V +PGAYVF+ +DFPGK+ LR+++TVPFV+P+V+V F+ + G+ G L
Sbjct: 77 ASTGLTLLVALPGAYVFARFDFPGKQVLRAVVTVPFVLPTVVVGTAFLALVGRGGLFDEL 136
Query: 123 GGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
GL + AI+LAHVF+NY VVVR + W +++P +EAA LGA +R++TLP
Sbjct: 137 WGLRLDTTVWAILLAHVFFNYAVVVRTVGGLWAQLDPRQEEAARMLGASRLRAWRQVTLP 196
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
L P++ A+L+ F F F SF + ILGG ++T+EV I+ + D T++ L LIQ
Sbjct: 197 ALAPAVAAAALMVFLFTFTSFGVVQILGGPTFSTLEVEIYRQTSQVFDLSTAAVLTLIQF 256
Query: 243 TISAILMYIYAKLIERYSREEEQRVLIA--KKRLKLDIEGIAILVYFIFVL-VFIISPLF 299
++ ++A + R RE R++ A R A+L + V+ V ++ PL
Sbjct: 257 AAVVAVLAVHAWTVRR--RETALRLVDAATTARRPRGAGQWALLAGVLGVIAVLLVLPLA 314
Query: 300 AVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVIL-ALPL 358
++ ++L S + RA + E F + I N+L++ A IAV++ AL
Sbjct: 315 VLVQRSL----GASGFGYYRALTREDGGAFLVPPIEAIGNSLQYAVAATAIAVVIGALAA 370
Query: 359 ARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD--TSLYGHWLLIALAHATVA 416
+ R+ R + LPL S+V +G G+L+A + L W+L+ LA A V
Sbjct: 371 TALTRRDAGRFVRGFDALLMLPLGVSAVTVGFGFLIALDEPPLDLRSSWILVPLAQALVG 430
Query: 417 YPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAE 476
PF RT+ +R + L EA+ LGAS + +V+LP++ +LVA+ F+FA+S E
Sbjct: 431 VPFVVRTMLPVLRAVDGRLREAAAVLGASPWRVWREVDLPMVRRALLVAAGFAFAVSLGE 490
Query: 477 LATTYMLASPENTTLTLAIYKFI---SSRQFGPASALSVVLMIISMVSFLLIERI 528
T +A P+N TL +A+ + + +G A ALS +LM++ V+ +++ER+
Sbjct: 491 FGATVFIARPDNPTLPVAVARLLGRPGDMNYGQAMALSTILMLVCAVALVVLERL 545
>gb|AAG20487.1| (AE005121) sulfate transport system permease protein; CysT1
[Halobacterium sp. NRC-1]
Length = 606
Score = 278 bits (704), Expect = 1e-73
Identities = 175/530 (33%), Positives = 292/530 (55%), Gaps = 47/530 (8%)
Query: 28 YVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDF 87
++P + V+ G SL ++ FT QA+LST+A++A+G+PGAYV + ++F
Sbjct: 91 WLPAITVVHPGVSLG-------------LVGFTAYQAVLSTVASVALGLPGAYVLARFEF 137
Query: 88 PGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGP----LGGLGI-----LYNWKAIILAH 138
PG+R LRSL +PFV+PS++V +GF+ FG+ G L LG+ LY + +++AH
Sbjct: 138 PGRRTLRSLTILPFVLPSIMVVVGFVATFGQHGTVNDALAALGVGRVQFLYTLQIVVVAH 197
Query: 139 VFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTF 198
FYN P+V R++AS+WE ++ E A SLGA FR + +P L+P+I ++LLTF F
Sbjct: 198 AFYNAPLVTRMVASAWETVDASAVETARSLGASPLRAFRDVVVPQLVPAIAASALLTFVF 257
Query: 199 CFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIER 258
FMSF I L LGG K AT+EV ++ + + D+ T+++LA ++ +S LMY+Y + R
Sbjct: 258 TFMSFPIVLALGGLKLATVEVWLY-ARIQQFDYGTAAALATLETGLSLALMYVYLRYEGR 316
Query: 259 YSREEEQRVLIAKKRLKLDIEG-------IAILVYFIFVLVFIISPLFAVIYKALMFNDR 311
S +KRL L G +A + Y + V V ++P+ +++ ++
Sbjct: 317 QSAASAGGRSRPRKRL-LGASGGREWALRLAGVGYAVVVAVVFVAPVVSMVAASVGGVTD 375
Query: 312 LSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKG 371
+L W+R F T + ++ FG A+ +A+ + + + AR RG+
Sbjct: 376 PTLRWWR--FLGTRQASGRTQPATAVWYSIVFGVGALAVALPMGVVVGAFSARGG-RGRR 432
Query: 372 LLEVFATLPLASSSVMLGLGYL--------LAFRDTSLYGHWLLIALAHATVAYPFAFRT 423
L + P+A S V++G G L +A L G L++ AHA YPF R
Sbjct: 433 LADAALMAPVAVSGVVVGFGLLQSLAFGVDIAGTRVQLVGP-LVVVCAHAIAGYPFVVRN 491
Query: 424 ISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYML 483
++ + + ++E++ LGAS + VELPL+ G++ + F+FAIS E +T +L
Sbjct: 492 VAPMLAAVDSRVVESARALGASRGRALWDVELPLVWPGVVAGAAFAFAISIGEFDSTVIL 551
Query: 484 ASPENTTLTLAIYKFISSR----QFGPASALSVVLMIISMVSFLLIERIG 529
A+ T+ +A+ +F+ R GPA+A+ VL++++ SF++I+R+G
Sbjct: 552 ANESVYTMPVALKRFLIDRTAGPSTGPAAAMGTVLLVVTAASFVVIDRVG 601
>pir||G75267 ABC transporter, permease protein, CysTW family - Deinococcus
radiodurans (strain R1)
>gi|6460308|gb|AAF12029.1|AE002078_2 (AE002078) ABC
transporter, permease protein, CysTW family [Deinococcus
radiodurans]
Length = 515
Score = 208 bits (523), Expect = 2e-52
Identities = 151/518 (29%), Positives = 260/518 (50%), Gaps = 30/518 (5%)
Query: 20 MLLLLSLFYVPMVRVISLGFSLTS---LLSVLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
+L L +L + ++ + LG +L L V D Y+ + +T QA + L VG
Sbjct: 10 LLALPALVFTALLLALPLGRTLAEGGVNLGVWRDPYFLERLGWTLTQAAGTAGLALLVGA 69
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG---PLGGLGILYNWKA 133
P AY+ S Y+ PGK L+ +PFV P+++ LG + G G L GL +
Sbjct: 70 PLAYLLSRYEVPGKGAFLRLLLLPFVTPTLVAVLGLTALAGPHGWLTRLTGLDLSETPAL 129
Query: 134 IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASL 193
+I ++F+N PV++R+ + R+ + AA +LGA G + LPL LP + ++
Sbjct: 130 LIWGNLFFNLPVMIRLAYGGFARVPTNLIGAARTLGASGARAAWDVALPLALPGLAAGAV 189
Query: 194 LTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYA 253
L F + +SF +PL LGG +YAT+EV I++ + L +S+L + QL ++ + ++Y
Sbjct: 190 LVFLYSALSFGLPLALGGERYATLEVEIYTLTALQLRLPEASALIVGQLALTLVATWLYT 249
Query: 254 KLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLS 313
+L + + A+ + GI +L ++ F +PL AV+ + L+ + +
Sbjct: 250 RLTRGGAGVATGGLPRARGGA---LAGITLLGGLTLLVCF--APLLAVVVRGLVGSAGPT 304
Query: 314 LEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILA--LPLARVIAREKFRGKG 371
L ++R ++E P+ + NTL+FG +A+L A L L +AR +
Sbjct: 305 LLYWRGVVNDEQTPLL-------LGNTLRFGALALLGATALGGLYALGAWLARSR----- 352
Query: 372 LLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKI 431
+L++ + LPL S V L +GYLLA+ L ++ A+ +A P R++ ++R I
Sbjct: 353 VLDLISLLPLMVSPVSLAVGYLLAY--PVLAATLPMLIAAYTLLALPLLVRSLLPALRAI 410
Query: 432 KKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTL 491
L EA+ TLGAS + V LPL + + + + A E T +L PE TL
Sbjct: 411 PPRLFEAARTLGASPLAAHRTVTLPLTLPALRGGAALALATVLGEFGATLVLTRPEWATL 470
Query: 492 TLAIYKFI---SSRQFGPASALSVVLMIISMVSFLLIE 526
+ +Y+ + R G A AL+ VL+++S +F +++
Sbjct: 471 STGLYERLGRPGERNLGEACALATVLLLLSATAFTVLD 508
>pir||A71361 probable thiamin ABC transporter, permease protein - syphilis
spirochete >gi|3322407|gb|AAC65131.1| (AE001199)
thiamine ABC transporter, permease protein, putative
[Treponema pallidum]
Length = 593
Score = 184 bits (462), Expect = 2e-45
Identities = 144/500 (28%), Positives = 248/500 (48%), Gaps = 46/500 (9%)
Query: 56 VIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIII 115
+ A + QAL S + AVG A+ F + +L +P +P + +AL F++
Sbjct: 111 LFAQSVFQALCSAVLACAVGFGAAFFFVKRSLRARALFPALCAIPLAIPPLTMALAFLLS 170
Query: 116 FGKSG----PLGGLG-------ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEA 164
FGK+G LG L LY+ +++AH +YN+P+ + +IA +W I+ ++A
Sbjct: 171 FGKNGLCTRTLGTLWGVSTPRTFLYSASGVVIAHAWYNFPLALAIIARAWNTISADAEDA 230
Query: 165 AMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSS 224
A LGA+ + VF ITLP L ++ + L+ F +CF S + L+LGG + T+EV ++ S
Sbjct: 231 ARLLGARAYRVFYTITLPALAGALRSSFLVIFLYCFFSLMMVLLLGGTTFTTLEVELYRS 290
Query: 225 AMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRV--LIAKKR------LKL 276
+S+LAL Q T A+LM I S EE Q+ +A+ R ++
Sbjct: 291 IRTQAAHPYASTLALSQ-TFYALLM------IWGVSTEESQQAQSCVARTRPLPTQSIQG 343
Query: 277 DIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMT 336
+IE I +L F+I PLF+++ ++ + F ++ +F S
Sbjct: 344 NIERIGFFALLCGILFFLILPLFSLVLHSITRHRAGRTVSFTLT---AWHTLFSAPSFWH 400
Query: 337 IL-NTLKFGF--IAVLIAVILA---LPLARVIAREKFRGKGLLEVFATLPLASSSVMLGL 390
L +T+ GF V + +L + L R ++R K R LPLA S ++L
Sbjct: 401 ALRSTIWIGFWSFCVTVGSVLCYGYMVLMRHVSRWKTR-------LPFLPLAVSPMVLAF 453
Query: 391 GYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSF 450
G+ L R S +L+ A + +A+PFA+ ++ ++ +I ++ L + F
Sbjct: 454 GWSLMPRCASR----ILLVCAQSALAFPFAWLSLYSTLMRIPTPVIFTGQMLSRNRLDFF 509
Query: 451 LKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASAL 510
L+ PL GI+ A +++FA+SAA+ A +L P+ ++ L +Y+ S+ +F +SAL
Sbjct: 510 LRTICPLCKKGIVSAGVYAFALSAADAAFPLVLEIPDFQSVALLLYRLSSTYRFAESSAL 569
Query: 511 SVVLMIISMVSFLLIERIGE 530
++VL + S V + + R E
Sbjct: 570 ALVLSLASSVLLIGVHRCKE 589
>pir||A81958 probable permease NMA0414 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7379164|emb|CAB83713.1|
(AL162753) putative permease [Neisseria meningitidis
Z2491]
Length = 530
Score = 175 bits (439), Expect = 1e-42
Identities = 141/523 (26%), Positives = 243/523 (45%), Gaps = 47/523 (8%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
L+P L ++ P+ V + + + +VLSD Y + +A+T QA + + L +G+
Sbjct: 31 LLPSAFLAAMVVAPLWAVAA--YDGLAWRAVLSDAYMLKRLAWTVFQAAATCVLVLPLGV 88
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWK---- 132
P A+V + FPG+ + L+ +PFVMP+++ +G + +FG G L W+
Sbjct: 89 PVAWVLARLAFPGRALVLRLLMLPFVMPTLVAGVGVLALFGADGLLWR-----GWQDTPY 143
Query: 133 AIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVAS 192
++ +VF+N PV+VR + ++ + A +LGA + F I +P+L P +
Sbjct: 144 LLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTARTLGAGAWRRFWDIEMPVLRPWLAGGV 203
Query: 193 LLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIY 252
L F +CF F + L+LGG +YAT+EV I+ M LD +S L + L ++A +Y
Sbjct: 204 CLVFLYCFSGFGLALLLGGSRYATVEVEIYQLVMFELDMAVASVLVWLVLGVTAAAGLLY 263
Query: 253 AKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVL-VFIISPLFAVIYKALMFNDR 311
A R ++ V + +L + VL V + PL A++ KA
Sbjct: 264 AWFGRR--AVSDKAVSPVMPSPPQSVGEYVLLAFAAAVLSVCCLFPLLAIVVKA------ 315
Query: 312 LSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKG 371
W + E + + + + + NTL+F AV A +L + A R + +G
Sbjct: 316 ----W---SAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVLGVVYAAAARRSAWM-RG 367
Query: 372 LLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHW-----LLIALAHATVAYPFAFRTISI 426
L+ LP S V + G LL LY W LL+A+ +A +AYPF + +
Sbjct: 368 LM----FLPFMVSPVCVSAGVLL------LYPQWTASLPLLLAM-YALLAYPFVAKDVLS 416
Query: 427 SIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASP 486
+ + + A+ LGA+ + ++ PL+ + + A E A T L+ P
Sbjct: 417 AWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEFAATLFLSRP 476
Query: 487 ENTTLTLAIYKFI---SSRQFGPASALSVVLMIISMVSFLLIE 526
E TLT IY ++ + A L+++L ++ FLL++
Sbjct: 477 EWQTLTTLIYAYLGRAGEDNYARAMVLTLLLAAFALGIFLLLD 519
>pir||E81015 ABC transporter, permease protein NMB2026 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7227288|gb|AAF42349.1| (AE002552) ABC transporter,
permease protein [Neisseria meningitidis MC58]
Length = 531
Score = 174 bits (436), Expect = 3e-42
Identities = 141/526 (26%), Positives = 242/526 (45%), Gaps = 53/526 (10%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
L+P L + P+ V + + + +VLSD Y + +A+T QA + + L +G+
Sbjct: 32 LLPSAFLAVMVVAPLWAVAA--YDGLAWRAVLSDAYMLKRLAWTVFQAAATCVLVLPLGV 89
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKA--- 133
P A+V + FPG+ + L+ +PFVMP+++ +G + +FG G L W+
Sbjct: 90 PVAWVLARLAFPGRALVLRLLMLPFVMPTLVAGVGVLALFGADGLL--------WRGRQD 141
Query: 134 ----IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSIL 189
++ +VF+N PV+VR + ++ + A +LGA + F I +P+L P +
Sbjct: 142 TPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTARTLGAGAWRRFWDIEMPVLRPWLA 201
Query: 190 VASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILM 249
L F +CF F + L+LGG +YAT+EV I+ M LD +S L + L ++A
Sbjct: 202 GGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQLVMFELDMAVASVLVWLVLGVTAAAG 261
Query: 250 YIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVL-VFIISPLFAVIYKALMF 308
+YA R ++ V + +L + VL V + PL A++ KA
Sbjct: 262 LLYAWFGRR--AVSDKAVSPVMPSPPQSVGEYVLLAFAAAVLSVCCLFPLLAIVVKA--- 316
Query: 309 NDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFR 368
W + E + + + + + NTL+F AV A +L + A R +
Sbjct: 317 -------W---SAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVLGVVYAAAARRSAWM 366
Query: 369 GKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHW-----LLIALAHATVAYPFAFRT 423
+GL+ LP S V + G LL LY W LL+A+ +A +AYPF +
Sbjct: 367 -RGLM----FLPFMVSPVCVSAGVLL------LYPQWTASLPLLLAM-YALLAYPFVAKD 414
Query: 424 ISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYML 483
+ + + + A+ LGA+ + ++ PL+ + + A E A T L
Sbjct: 415 VLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEFAATLFL 474
Query: 484 ASPENTTLTLAIYKFI---SSRQFGPASALSVVLMIISMVSFLLIE 526
+ PE TLT IY ++ + A L+++L ++ FLL++
Sbjct: 475 SRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLAAFALGIFLLLD 520
>pir||D82063 probable thiamin ABC transporter, permease protein VC2538
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9657122|gb|AAF95679.1| (AE004323) thiamine ABC
transporter, permease protein, putative [Vibrio
cholerae]
Length = 530
Score = 153 bits (382), Expect = 6e-36
Identities = 130/499 (26%), Positives = 226/499 (45%), Gaps = 32/499 (6%)
Query: 47 VLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSV 106
+ D YYR V F+F QA ST+ ++ + IP A+ S FPG+ L L + V+P +
Sbjct: 38 IWQDAYYRHVTQFSFYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVL 97
Query: 107 IVALGFIIIFGKSG----PLGGLGI-----LYNWKAIILAHVFYNYPVVVRVIASSWERI 157
+ G I I+G SG L +G +Y I+LAHV +N P R++ S E I
Sbjct: 98 VAIFGLIAIYGNSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAI 157
Query: 158 NPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLIL-GGYKYAT 216
+ LG + F+ + P L + + L F CF SF+ + L GG K T
Sbjct: 158 PSEQHKLCAHLGMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATT 217
Query: 217 IEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKL 276
IE+AI+ + D + + LA+ Q+ + +L + ++R+S +K +
Sbjct: 218 IELAIYQAIKFDFDLQIGALLAIWQMLLCTLLTF----TLQRFSHSRPMNSAASKVTERW 273
Query: 277 DIEGIAILV----YFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTS 332
+ V + + V ++ PL V+ L N +L F + +
Sbjct: 274 VRDSWRAKVWDASWIVAACVLVLPPLVMVVLAGL--NSKLGKVLTSGDFWSAVSHSLQVA 331
Query: 333 SLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGY 392
SL + L +A IA++L R+ A + R G +E ATL L + +++ G
Sbjct: 332 SLASSL------ALASGIAMLLTSRALRLKAAHR-RANG-VEWIATLILVTPGLVVSTGL 383
Query: 393 LLAFR---DTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALS 449
L R D +W+++A+ +A +A P+ +T+S + + + +LG S
Sbjct: 384 FLLLRNITDVFRLAYWIVVAV-NALMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRR 442
Query: 450 FLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASA 509
F VE + + A F +S +L+ + S + TL L +Y+ + S Q A+
Sbjct: 443 FRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGSQDFRTLPLYLYQLLGSYQMDTAAV 502
Query: 510 LSVVLMIISMVSFLLIERI 528
+++ ++I+S+ F +IER+
Sbjct: 503 VALAMLIMSVGWFYVIERL 521
>gb|AAF68424.1|AF237938_1 (AF237938) putative thiamin ABC transporter [Pasteurella multocida]
Length = 536
Score = 147 bits (367), Expect = 3e-34
Identities = 137/527 (25%), Positives = 240/527 (44%), Gaps = 37/527 (7%)
Query: 20 MLLLLSLFYV-PMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPG 78
+++ LS FY + V SL F+ S ++LSD+Y + VI F+F QA LS + + G
Sbjct: 21 VIVFLSAFYAFALGAVFSLPFA-RSWTALLSDQYLQHVIIFSFWQAFLSAVLAVLFGGIV 79
Query: 79 AYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNW------- 131
A F + F GK+ + L ++ FV+P+++ G + ++G SG L L + W
Sbjct: 80 ARAFFYQPFVGKKLILKLFSLTFVLPALVAIFGLLGVYGASGWLAMLSQFFAWDWTPNIY 139
Query: 132 --KAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSIL 189
I+LAH+F+N P+ R+ + I ++ A L +G+ R I P L +L
Sbjct: 140 GLTGILLAHLFFNVPLACRLFLQGLQAIPVQQRQLAAQLNLRGWHFIRLIEWPYLRQQLL 199
Query: 190 VASLLTFTFCFMSFSIPLIL-GGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAIL 248
A L F CF SF+I L L GG KY T+EVAI+ + + D + AL+Q +L
Sbjct: 200 PAFTLIFMLCFTSFAIVLTLGGGPKYTTLEVAIYQAILFEFDVPKAGLFALLQFVFCFLL 259
Query: 249 MYIYAKLIERYSRE-EEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALM 307
+ + + Q A + + + I+V VFI+ PL + AL
Sbjct: 260 FTLSSFFSPAPATTLHSQPTWFAPQSYWVKLWQRMIIV---CATVFILLPLLNTLVSAL- 315
Query: 308 FNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILA---LPLARVIAR 364
LS ++F + G S +TI T + L+A++L+ L LAR +
Sbjct: 316 ----LSSQFFTLWLQPQLWKALGYS--LTIAPT------SALLALVLSFALLLLARELHW 363
Query: 365 EKFRGKG--LLEVFATLPLASSSVMLGLGYLLAFR--DTSLYGHWLLIALAHATVAYPFA 420
+R +L + AT+ LA +++L +G + R D S Y + ++ +A A PF
Sbjct: 364 RHYRSLSHVILNIGATI-LAIPTLVLAIGLFILLREIDFSPYHLFGVVVCCNALAAMPFV 422
Query: 421 FRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATT 480
R +++ + + +L F +E + + A + A+S +
Sbjct: 423 LRILALPMHNNMIYYEKLCQSLNLRGWQRFRLIEWHKLRAPMKYAFALACALSLGDFTAI 482
Query: 481 YMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
+ + T+L +Y+ + + A+ + +L++ + F++IER
Sbjct: 483 ALFGQADFTSLPHLLYQQLGHYRSQEAAVTAFILLVFCLSVFMIIER 529
>sp|P44985|THIP_HAEIN THIAMINE TRANSPORT SYSTEM PERMEASE PROTEIN THIP
>gi|1074608|pir||D64164 hypothetical protein HI1020 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574049|gb|AAC22679.1| (U32782) thiamin ABC
transporter, permease protein, putative [Haemophilus
influenzae Rd]
Length = 538
Score = 146 bits (366), Expect = 4e-34
Identities = 124/544 (22%), Positives = 243/544 (43%), Gaps = 58/544 (10%)
Query: 23 LLSLFYVPMVR--------------VISLGFSLTSLLSV---------LSDEYYRRVIAF 59
+ SLF+ P +R ++ G +L+S+ ++ +D+Y + +I F
Sbjct: 1 MFSLFHHPQLRPRHYAGGVVVISFIILFYGGALSSIFALGGELQWRAWFTDDYLQHLILF 60
Query: 60 TFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKS 119
+F QALLST+ ++ G+ A + F GK++L L+++ FV+P+++V G I I+G S
Sbjct: 61 SFGQALLSTVLSIFFGLLLARALFYKPFLGKKWLLKLMSLTFVLPALVVIFGLIGIYGSS 120
Query: 120 GPLGGL---------GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGA 170
G L L G +Y I++AH+F+N P+ ++ S + I ++ A L
Sbjct: 121 GWLAWLANLFGMSWQGHIYGLSGILIAHLFFNIPLAAQLFLQSLQSIPYQQRQLAAQLNL 180
Query: 171 KGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLIL-GGYKYATIEVAIFSSAMMLL 229
+G+ + + P+ L L F CF SF++ L L GG +Y T+E AI+ + +
Sbjct: 181 QGWQFVKLVEWPVFRQQCLPTFSLIFMLCFTSFTVVLTLGGGPQYTTLETAIYQAILFEF 240
Query: 230 DFKTSSSLALIQLTISAILMYIYAKL-IERYSREEEQRVLIAKKRLKLDIEGIAILVYFI 288
D ++ A++Q IL + ++ + + + K + + I I +L+ F+
Sbjct: 241 DLPKAALFAMLQFVFCLILFSLTSRFSLSNQNGLSNSNIWFEKPKSAVKIFHILVLLVFV 300
Query: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILN-TLKFGFIA 347
F F+ SP+ ++ AL ++ L+ ++ S L L +L ++
Sbjct: 301 F---FLFSPVLNILISALSSSNLLT--------------VWHNSQLWRALGYSLSIAPLS 343
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVF------ATLPLASSSVMLGLGYLLAFRDTSL 401
L+A+ +A+ L + R ++ + F L + + +GL LL RD S
Sbjct: 344 ALLALTMAIALLLLSRRLEWLHYQKISQFIINAGMVILAIPILVLAMGLFLLLQDRDFSN 403
Query: 402 YGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNG 461
++++ +A A PF R +S + +LG F +E +
Sbjct: 404 IDLFIIVVFCNALSAMPFVLRILSAPFHNNMRYYENLCNSLGIVGWQRFYLIEWKTLRAP 463
Query: 462 ILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVS 521
+ A A+S + + + E T+L +Y+ + + + A+ + +L+++ +
Sbjct: 464 LRYAFALGLALSLGDFTAIALFGNQEFTSLPHLLYQQLGNYRNQDAAVTAGILLLLCGIL 523
Query: 522 FLLI 525
F I
Sbjct: 524 FAFI 527
>pir||H82428 iron(III) ABC transporter, permease protein VCA0686 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658104|gb|AAF96586.1| (AE004398) iron(III) ABC
transporter, permease protein [Vibrio cholerae]
Length = 700
Score = 143 bits (357), Expect = 5e-33
Identities = 126/537 (23%), Positives = 235/537 (43%), Gaps = 33/537 (6%)
Query: 17 LIPMLLLLSLF--------YVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
LI ++LL+ +F ++PM + ++ +++LS + VI + +
Sbjct: 152 LISIILLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIAVG 211
Query: 69 LATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL-----G 123
+ G+ A + R +P V P IV LG ++ G+SG +
Sbjct: 212 VGATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVD 271
Query: 124 GLGI-----LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRK 178
G G+ LY + I LA V P+ ++ + + ++P +EA+ +L A + F
Sbjct: 272 GFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTFFG 331
Query: 179 ITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLA 238
I +PLL P++ + L+ F FS PL+LGG F A LD+ ++S+L
Sbjct: 332 IIMPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYASASTLG 391
Query: 239 LIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPL 298
+ L S + + I + S V I+ K + D++ + + + +
Sbjct: 392 SVLLLFSLAIFVVQYLWIGQRSY-----VTISGKAYRGDVQEMPASLKLGVTVTLYAWMI 446
Query: 299 FAVIYKALMFNDRLSLEW---FRRAFSEEYNPMFGTS----SLMTILNTLKFGFIAVLIA 351
F V+ +F ++ W + F N +FG + +++ T+ + +A I
Sbjct: 447 FNVLLYGSIFFGSFTVNWGVDYTLTFKNYLN-LFGNGMSDGAWPSLITTMIYAGVAAPIT 505
Query: 352 VILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY--GHWLLIA 409
+ L +A V+ R++F GK ++E L A + G+ Y+LAF D +Y G ++
Sbjct: 506 ALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFNDAPIYLTGTAAIVV 565
Query: 410 LAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFS 469
++ P R+ + ++ K+L EASL+L AS + + LPL+ IL ++S
Sbjct: 566 ISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVYS 625
Query: 470 FAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIE 526
F + ++ L +PE T I + ++G A A VL+++ + LL +
Sbjct: 626 FVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIAYGSVLIVVMLAIILLFD 682
>sp|Q44123|AFUB_ACTPL FERRIC TRANSPORT SYSTEM PERMEASE PROTEIN AFUB
>gi|1469285|gb|AAB05031.1| (U05042) afuB gene product
[Actinobacillus pleuropneumoniae]
>gi|1477454|gb|AAB17217.1| (U04954) afuB [Actinobacillus
pleuropneumoniae]
Length = 687
Score = 143 bits (356), Expect = 6e-33
Identities = 127/541 (23%), Positives = 237/541 (43%), Gaps = 38/541 (7%)
Query: 17 LIPMLLLLSLFYV-PMVRV-ISL-----GFSLTSLLSVLSDEYYRRVIAFTFVQA----L 65
L+ ++LL+ F V P V + IS+ F+ ++ +L Y RVI+ + + +
Sbjct: 141 LLSIILLIFFFIVYPTVAIFISMFYDGETFAPEQVVRILGQGYIVRVISNSLFLSGFVGI 200
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL 125
+ST+ LA + + F GK F +P V P +V LG ++ G+SG +
Sbjct: 201 VSTVFGLAFALYTTRIAHRTAFIGKIFS----ILPIVTPPFVVGLGVTLMLGRSGYVTEF 256
Query: 126 ----------GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVV 175
LY + I +A + P+ ++ + + I+P +EA+ +L A +
Sbjct: 257 LDTYFGFKDHNWLYGFNGIAIAQILAFAPISFMILDGALKSIHPSIEEASYTLRANRYQT 316
Query: 176 FRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSS 235
F I PLL P++ + L+ F FS PL+LGG F A LD+ ++S
Sbjct: 317 FYNIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQLDYASAS 376
Query: 236 SLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGI------AILVYFIF 289
+L + L S ++ + I S V ++ K + D++ + I+V F
Sbjct: 377 TLGSMLLIFSLLIFIVQYMWIGNRS-----YVTVSGKSYRGDVQDLPSGLKYTIIVMLGF 431
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVL 349
+VF + ++ Y + N + ++ + + +++NT+ + IA
Sbjct: 432 WVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLINTMIYAGIAAP 491
Query: 350 IAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY--GHWLL 407
+ + L +A ++ R+ F+GK LE L A + G+ Y+LAF D +Y G ++
Sbjct: 492 LTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFNDAPMYITGTGII 551
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
I ++ P R + ++ K+L EASL+L S + + PL+ +L A +
Sbjct: 552 IIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALV 611
Query: 468 FSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
SF + ++ L + + T I + ++G A A +L+++ M L +
Sbjct: 612 TSFVRAMTTVSAIVFLVTADTRVATAYILNRVEDGEYGVAIAYGSILIVVMMAIILFFDW 671
Query: 528 I 528
I
Sbjct: 672 I 672
>pir||S40583 hypothetical protein - Escherichia coli >gi|216487|dbj|BAA01338.1|
(D10483) sfuB protein homolog(PIR:B35108) [Escherichia
coli]
Length = 536
Score = 138 bits (344), Expect = 2e-31
Identities = 126/510 (24%), Positives = 226/510 (43%), Gaps = 51/510 (10%)
Query: 45 LSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMP 104
++V D Y V+ F+F QA LS L ++ I A FPG+ L L + ++P
Sbjct: 44 VAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILP 103
Query: 105 SVIVALGFIIIFGKSGPLG----GLGIL-----YNWKAIILAHVFYNYPVVVRVIASSWE 155
++ G + ++G+ G L LG+ Y + I+LAHVF+N P+ R++ + E
Sbjct: 104 VLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALE 163
Query: 156 RINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYA 215
I ++ A LG + + FR + P L I + L F CF SF+ L LGG A
Sbjct: 164 NIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQA 223
Query: 216 -TIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYS---------REEEQ 265
TIE+AI+ + D ++ LAL+Q+ L+ + +L + + R+ +
Sbjct: 224 TTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDD 283
Query: 266 RVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEY 325
R+ I V + L+ ++ PL AVI ++ R E
Sbjct: 284 RL----------HSRICDTVLIVLALLLLLPPLLAVI-----------VDGVNRQLPEVL 322
Query: 326 -NPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASS 384
P+ + ++ L G + V++ ++L + AR+K +LE+ L LA
Sbjct: 323 AQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMP 382
Query: 385 SVMLGLGYLLAFRDT-----SLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEAS 439
++L G+ L +T S G ++ +A +A P+A + + +R I
Sbjct: 383 GIVLATGFFLLLNNTIGLPQSADG---IVIFTNALMAIPYALKVLENPMRDITARYSMLC 439
Query: 440 LTLGASEALSFLK-VELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKF 498
+LG E S LK VEL + + A F+ +S + + + + TL +Y+
Sbjct: 440 QSLGI-EGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQ 498
Query: 499 ISSRQFGPASALSVVLMIISMVSFLLIERI 528
I S + + +++L+++ + F +IE++
Sbjct: 499 IGSYRSQDGAVTTLILLLLCFLLFTVIEKL 528
>sp|P31549|YABK_ECOLI HYPOTHETICAL 59.6 KD PROTEIN IN ARAC-TBPA INTERGENIC REGION
(ORF101) >gi|7429027|pir||C64728 probable membrane
protein yabK - Escherichia coli
>gi|1786254|gb|AAC73178.1| (AE000117) putative transport
system permease protein [Escherichia coli K12]
Length = 536
Score = 138 bits (344), Expect = 2e-31
Identities = 126/510 (24%), Positives = 226/510 (43%), Gaps = 51/510 (10%)
Query: 45 LSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMP 104
++V D Y V+ F+F QA LS L ++ I A FPG+ L L + ++P
Sbjct: 44 VAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILP 103
Query: 105 SVIVALGFIIIFGKSGPLG----GLGIL-----YNWKAIILAHVFYNYPVVVRVIASSWE 155
++ G + ++G+ G L LG+ Y + I+LAHVF+N P+ R++ + E
Sbjct: 104 VLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALE 163
Query: 156 RINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYA 215
I ++ A LG + + FR + P L I + L F CF SF+ L LGG A
Sbjct: 164 NIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQA 223
Query: 216 -TIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYS---------REEEQ 265
TIE+AI+ + D ++ LAL+Q+ L+ + +L + + R+ +
Sbjct: 224 TTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDD 283
Query: 266 RVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEY 325
R+ I V + L+ ++ PL AVI ++ R E
Sbjct: 284 RL----------HSRICDTVLIVLALLLLLPPLLAVI-----------VDGVNRQLPEVL 322
Query: 326 -NPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASS 384
P+ + ++ L G + V++ ++L + AR+K +LE+ L LA
Sbjct: 323 AQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMP 382
Query: 385 SVMLGLGYLLAFRDT-----SLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEAS 439
++L G+ L +T S G ++ +A +A P+A + + +R I
Sbjct: 383 GIVLATGFFLLLNNTIGLPQSADG---IVIFTNALMAIPYALKVLENPMRDITARYSMLC 439
Query: 440 LTLGASEALSFLK-VELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKF 498
+LG E S LK VEL + + A F+ +S + + + + TL +Y+
Sbjct: 440 QSLGI-EGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQ 498
Query: 499 ISSRQFGPASALSVVLMIISMVSFLLIERI 528
I S + + +++L+++ + F +IE++
Sbjct: 499 IGSYRSQDGAVTALILLLLCFLLFTVIEKL 528
>pir||F72555 probable molybdenum transport system permease protein APE1730 -
Aeropyrum pernix (strain K1) >gi|5105418|dbj|BAA80731.1|
(AP000062) 555aa long hypothetical molybdenum transport
system permease protein [Aeropyrum pernix]
Length = 555
Score = 134 bits (335), Expect = 2e-30
Identities = 122/504 (24%), Positives = 227/504 (44%), Gaps = 41/504 (8%)
Query: 56 VIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIII 115
VI T + A L TL + +G A + S Y FPG+ +R ++ +P + + A +
Sbjct: 46 VIVNTVIVATLVTLFSTVIGTAAALLTSSYYFPGRDVVRIVMMLPLLYTPFVNAFVVYNL 105
Query: 116 FGK--------SGPLGGLGILYNWKA-IILAHVFYNYPVVVRVIASSWERINPHYKEAAM 166
FGK +G L G+ + + A +IL +P+V +S +I+P KE A
Sbjct: 106 FGKDNGVLATITGSLFGVSVYFQGLAGVILTQTLMFWPIVYVNAFASMVQIDPSLKEQAE 165
Query: 167 SLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLI--LGGYKYATIEVAIFSS 224
+LGA+G + R +TLPL +P I + L F F + P+ + I I +S
Sbjct: 166 NLGARGLRLHRTVTLPLSMPGITAGAALVFIFSMEDLAAPIAFRVDNVISRWIVNEILAS 225
Query: 225 AMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAIL 284
+ + LALI ++ +++ K + Q+ + ++RL+ L
Sbjct: 226 PSVEEISVDTLILALILVSTASLWFVTVKKYLSLRQYAMLQKGGVRERRLEEPGPVAKAL 285
Query: 285 VYFIFV--LVFIISPLFAVIYKALMFN------DRLSLEWFRRAFSEEYNPMFGTSSLMT 336
+Y I + +V ISP V+ A + +L+ R S+ + +
Sbjct: 286 IYLILIPWIVVSISPQLGVLVYAFSESWIGTTPQGFTLDHMREVLSD-------SRVVNA 338
Query: 337 ILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAF 396
N++ + +A LI++++A+ + + R + R L+V AT+P+A + L LG L+ F
Sbjct: 339 FRNSVTYALLASLISIVIAVTTSYSVERLRTRLSEPLDVLATIPIALPGLALALGILIMF 398
Query: 397 RDTSLYGHW--------LLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEAL 448
+ G L + LA++ PFA R ++ + K+L EA++ LGA
Sbjct: 399 STSFTRGTLLDPYEFPALFLVLAYSVRKSPFATRAAFAGLKHLHKSLEEAAMNLGARRLR 458
Query: 449 SFLKVELPLIVNGILVASIFSFAISAAELATTYMLA--SPENTTLTLAIYKFISSRQFGP 506
+ +PLI +L + +F S E++T+ + + + + +T IY +++ G
Sbjct: 459 VIRDITVPLIGINLLGGVLLTFVYSVTEVSTSITIGGLNEDYSPITYIIYDYVTGGYGGG 518
Query: 507 -----ASALSVVLMIISMVSFLLI 525
A+++ V+LM I + + +
Sbjct: 519 AFVHLAASIVVILMAIQVAAITFV 542
Score = 81.1 bits (197), Expect = 3e-14
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 20/265 (7%)
Query: 15 LILIPMLL---------LLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQAL 65
LILIP ++ L+ F + GF+L + VLSD + AL
Sbjct: 288 LILIPWIVVSISPQLGVLVYAFSESWIGTTPQGFTLDHMREVLSDSRVVNAFRNSVTYAL 347
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL 125
L++L ++ + + +Y L L T+P +P + +ALG +I+F S G L
Sbjct: 348 LASLISIVIAVTTSYSVERLRTRLSEPLDVLATIPIALPGLALALGILIMFSTSFTRGTL 407
Query: 126 GILYNWKA--IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPL 183
Y + A ++LA+ P R + + ++ +EAAM+LGA+ V R IT+PL
Sbjct: 408 LDPYEFPALFLVLAYSVRKSPFATRAAFAGLKHLHKSLEEAAMNLGARRLRVIRDITVPL 467
Query: 184 LLPSILVASLLTFTFCFMSFSIPLILGGYK--YATIEVAIFS------SAMMLLDFKTSS 235
+ ++L LLTF + S + +GG Y+ I I+ + S
Sbjct: 468 IGINLLGGVLLTFVYSVTEVSTSITIGGLNEDYSPITYIIYDYVTGGYGGGAFVHLAASI 527
Query: 236 SLALIQLTISAILMYIYAKLIERYS 260
+ L+ + ++AI ++ L +RY+
Sbjct: 528 VVILMAIQVAAI-TFVNVALKQRYA 551
>pir||E83060 iron (III)-transport system permease HitB PA4688 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9950945|gb|AAG08075.1|AE004882_6 (AE004882) iron
(III)-transport system permease HitB [Pseudomonas
aeruginosa]
Length = 512
Score = 132 bits (328), Expect = 1e-29
Identities = 129/527 (24%), Positives = 235/527 (44%), Gaps = 55/527 (10%)
Query: 16 ILIPMLLLLSLFYVPMVRVISLGFSLT--SLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
+L+P+LLL L +P++ V + + S +L Y R++ T TL +
Sbjct: 15 LLLPVLLLALLASLPLLYVAAKAWDAGWHSAWQLLWRPYVFRLLGNTLWLMFGVTLLSAL 74
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKA 133
+G+ A+ D P +RF ++ +PF +P+ + + ++ + LGG
Sbjct: 75 LGLALAWCVERSDLPARRFWNVVLCLPFAIPAFVSSFTWVSLSPMYEGLGGA-------- 126
Query: 134 IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASL 193
IL YP+V +A++ I+P +E+A LG VF ++TLPLL P++ L
Sbjct: 127 -ILVMTMSKYPLVYLPVAATLRGIDPSLEESARMLGLSRRQVFLRVTLPLLRPTLAATGL 185
Query: 194 LTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYA 253
L + F IL +Y T AI+ + T++ L+ + L + +L+++
Sbjct: 186 LVALHMLVEFGALSIL---RYQTFTTAIYQEFELEFSNATAAMLSSVLLALCFLLLWLEL 242
Query: 254 KLIERY--------SREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKA 305
++ R S +RV + + L A+L + V I PL + Y
Sbjct: 243 RMRGRGRLVRTGQGSARRAERVRLGLGKWPLQ----ALLATLVLVGTGI--PLVMLGY-- 294
Query: 306 LMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVI--- 362
W S + P+ +S T+L++L F L++ +LALP++ ++
Sbjct: 295 ----------WLYEGSSASF-PLMEIAS--TLLSSLSLAFGGALLSCLLALPVSILVVRY 341
Query: 363 ----AREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYP 418
AR R LL+ L +A S V L YL A T+ L+ +A+A + P
Sbjct: 342 PGALARWTQRLPYLLQALPGLVIALSLVYFSLHYLPATYQTTG-----LLLVAYALLFMP 396
Query: 419 FAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELA 478
I +++ K L EA+ TLG + ++FL++ LP+I I + F + EL
Sbjct: 397 LTQAPIRVALEKASPQLEEAARTLGQTPLMAFLRITLPIISPAIGAGFVLVFLDTMKELT 456
Query: 479 TTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
T +L +TL +++ ++ ++ A+ + +L++IS + L+
Sbjct: 457 ATLVLGPTGLSTLATSVWVHTANLEYAAAAPYAALLILISGLPVYLL 503
>pir||H64049 afuB protein homolog - Haemophilus influenzae (strain Rd KW20)
Length = 550
Score = 126 bits (314), Expect = 5e-28
Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 36/500 (7%)
Query: 15 LILIPMLLLLSLFYVPMVRVISL-----GFSLTSLLSVLSDEYYRRVIAFTFVQA----L 65
L+ I +L+ + Y + +S+ F+ ++ +L+ Y RVI + + +
Sbjct: 11 LLCIILLIFFFIVYPTLAIFVSMFYDGDTFAPQQVMRILTQSYIVRVITNSLFLSGFVGI 70
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL--- 122
+ST+ LA + + F GK F +P V P +V LG ++ G+SG +
Sbjct: 71 VSTVFGLAFALYTTRIARRTAFIGKIFS----ILPIVTPPFVVGLGVTLMLGRSGYVTEF 126
Query: 123 -------GGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVV 175
LY + I +A + P+ ++ + + ++P +EA+ +L A +
Sbjct: 127 LSTNFGFSSHNWLYGFNGIAIAQILAFAPISFMILDGALKSVHPSIEEASYTLRANRYQT 186
Query: 176 FRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSS 235
F +I PLL P++ + L+ F FS PL+LGG F A LD+ ++S
Sbjct: 187 FYQIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQLDYASAS 246
Query: 236 SLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGI------AILVYFIF 289
+L + L S + I I S V ++ K + D++ + I+ F
Sbjct: 247 TLGSMLLIFSLAIFIIQYIWIGNRS-----YVTVSGKSYRGDVQELPNGLKYTIIGMLGF 301
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVL 349
++F ++ ++ Y + N ++ + ++ + + +++NTL + IA
Sbjct: 302 WVIFNMALYGSIFYGSFTVNWGVNYTLTLKNYAMLFGQGLSDGAWPSLINTLIYAGIAAP 361
Query: 350 IAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY--GHWLL 407
+ L +A ++ R+ F+GK LE L A + G+ Y+LAF + LY G ++
Sbjct: 362 LTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGTVAGVSYILAFNNAPLYITGTGII 421
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ ++ P R + ++ K+L EASL+L S + + LPL+ +L A +
Sbjct: 422 VIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSALV 481
Query: 468 FSFAISAAELATTYMLASPE 487
SF + ++ L + +
Sbjct: 482 TSFVRAMTTVSAIIFLVTAD 501
>sp|Q57341|AFUB_HAEIN PUTATIVE FERRIC TRANSPORT SYSTEM PERMEASE PROTEIN AFUB
>gi|3212179|gb|AAC21802.1| (U32698) H. influenzae
predicted coding region HI0129 [Haemophilus influenzae
Rd]
Length = 632
Score = 126 bits (314), Expect = 5e-28
Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 36/500 (7%)
Query: 15 LILIPMLLLLSLFYVPMVRVISL-----GFSLTSLLSVLSDEYYRRVIAFTFVQA----L 65
L+ I +L+ + Y + +S+ F+ ++ +L+ Y RVI + + +
Sbjct: 93 LLCIILLIFFFIVYPTLAIFVSMFYDGDTFAPQQVMRILTQSYIVRVITNSLFLSGFVGI 152
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL--- 122
+ST+ LA + + F GK F +P V P +V LG ++ G+SG +
Sbjct: 153 VSTVFGLAFALYTTRIARRTAFIGKIFS----ILPIVTPPFVVGLGVTLMLGRSGYVTEF 208
Query: 123 -------GGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVV 175
LY + I +A + P+ ++ + + ++P +EA+ +L A +
Sbjct: 209 LSTNFGFSSHNWLYGFNGIAIAQILAFAPISFMILDGALKSVHPSIEEASYTLRANRYQT 268
Query: 176 FRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSS 235
F +I PLL P++ + L+ F FS PL+LGG F A LD+ ++S
Sbjct: 269 FYQIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQLDYASAS 328
Query: 236 SLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGI------AILVYFIF 289
+L + L S + I I S V ++ K + D++ + I+ F
Sbjct: 329 TLGSMLLIFSLAIFIIQYIWIGNRS-----YVTVSGKSYRGDVQELPNGLKYTIIGMLGF 383
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVL 349
++F ++ ++ Y + N ++ + ++ + + +++NTL + IA
Sbjct: 384 WVIFNMALYGSIFYGSFTVNWGVNYTLTLKNYAMLFGQGLSDGAWPSLINTLIYAGIAAP 443
Query: 350 IAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY--GHWLL 407
+ L +A ++ R+ F+GK LE L A + G+ Y+LAF + LY G ++
Sbjct: 444 LTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGTVAGVSYILAFNNAPLYITGTGII 503
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ ++ P R + ++ K+L EASL+L S + + LPL+ +L A +
Sbjct: 504 VIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSALV 563
Query: 468 FSFAISAAELATTYMLASPE 487
SF + ++ L + +
Sbjct: 564 TSFVRAMTTVSAIIFLVTAD 583
Score = 70.2 bits (169), Expect = 5e-11
Identities = 72/322 (22%), Positives = 143/322 (44%), Gaps = 32/322 (9%)
Query: 221 IFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEG 280
+F +A+ +L S+++ I + S I++ + + S + +V+ K + +
Sbjct: 37 LFLTALSVLFMFISATVYKISMGYSVIVLLVGYTALATLSLAK-LKVMQGDKFIIASLLC 95
Query: 281 IAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNT 340
I +L++F FI+ P A+ D + + R ++ Y T+SL +
Sbjct: 96 IILLIFF-----FIVYPTLAIFVSMFYDGDTFAPQQVMRILTQSYIVRVITNSLFL---S 147
Query: 341 LKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLG--------- 391
G ++ + + AL R+ R F GK +F+ LP+ + ++GLG
Sbjct: 148 GFVGIVSTVFGLAFALYTTRIARRTAFIGK----IFSILPIVTPPFVVGLGVTLMLGRSG 203
Query: 392 YLLAFRDTSL---YGHWLL----IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGA 444
Y+ F T+ +WL IA+A P +F + +++ + ++ EAS TL A
Sbjct: 204 YVTEFLSTNFGFSSHNWLYGFNGIAIAQILAFAPISFMILDGALKSVHPSIEEASYTLRA 263
Query: 445 SEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQ- 503
+ +F ++ PL+ + + + F S A+ + +L + T IY +I+ Q
Sbjct: 264 NRYQTFYQIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIAT-QIYFYIAGSQL 322
Query: 504 -FGPASALSVVLMIISMVSFLL 524
+ AS L +L+I S+ F++
Sbjct: 323 DYASASTLGSMLLIFSLAIFII 344
>pir||G82440 ABC transporter, permease protein VCA0601 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658012|gb|AAF96502.1| (AE004390) ABC transporter,
permease protein [Vibrio cholerae]
Length = 592
Score = 125 bits (312), Expect = 9e-28
Identities = 109/482 (22%), Positives = 220/482 (45%), Gaps = 36/482 (7%)
Query: 65 LLSTLATLAVGIPG---AYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGP 121
+L T VGI AY + PGK R L + P + PS++ A+ I +FG G
Sbjct: 107 VLGISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQGM 166
Query: 122 L----GGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFR 177
L GG I Y I L +F+ +P + ++ +S + EAA +L F
Sbjct: 167 LKSWLGGESI-YGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPIKTFF 225
Query: 178 KITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSL 237
+TLP ++ A ++ FT F +P ++GG Y + IF + +F +
Sbjct: 226 IVTLPAAKYGLISALIVVFTLVVCDFGVPKVIGG-SYNVLATDIFKQVVGQQNFAMGAVT 284
Query: 238 ALIQLTISAILMYIYAKLIERYSREEEQRVL----IAKKRLKLDIEGIAILVYFIFVLVF 293
+++ L L ++A + +R+ ++++Q + +A + + L+Y + + V
Sbjct: 285 SIVLL-----LPAVFAFIADRWVQKKQQSLFDTRSVAYQPAPHRLRDGLCLLYCVLICVA 339
Query: 294 IISPLFAVIYKALM----FNDRLSLEWFRRAFSEEY--NPMFGTSSLMTILNTLKFGFIA 347
I++ L +Y +L+ +N L+L+ ++ A + Y +P F + +L ++ T G +
Sbjct: 340 IVAVLATAVYGSLVTFWPWNTALTLKHYQFAETSAYGWSPYFNSLTLASL--TALCGTVI 397
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTS-----LY 402
+ + ++ RV A + +++ + +P+A ++LGLGY+ F S LY
Sbjct: 398 IFLGA-YSIEKGRVFALL----RQAMQMLSMVPMAVPGLVLGLGYIFFFNHASNPLNGLY 452
Query: 403 GHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGI 462
G LL+ + Y T +++++ L + ++ + KV LP+ + +
Sbjct: 453 GGMLLLVINTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPVSLPAV 512
Query: 463 LVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSF 522
L + + F + + L S + ++A+ + Q G A+A++V++M+ + ++
Sbjct: 513 LDIASYLFINALTTTSAVVFLYSTDTVPASVAVLNMDDAGQTGAAAAMAVMIMLSAALAK 572
Query: 523 LL 524
LL
Sbjct: 573 LL 574
Score = 76.1 bits (184), Expect = 9e-13
Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 17/288 (5%)
Query: 246 AILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKA 305
A+LM + K + +R R+L R L I +L+ +L+FI++PL A++ K+
Sbjct: 17 AVLMRLKEKSMLNVARTFSVRILPHWSRDSL-ILSTTLLILLSLMLLFIVAPLAAMLLKS 75
Query: 306 LMFNDRLSLEWFRRAFSEEYNPMFGTSSL-MTILNTLKFGFIAVLIAVILALPLARVIAR 364
+ E+ A+ +Y F +++L ++ NTL G I ILA A + R
Sbjct: 76 VQNGQG---EFVGLAYFAQY---FSSAALWQSLRNTLVLGISVTAIVGILAFGYAYALTR 129
Query: 365 EKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHW---------LLIALAHATV 415
GK L V + P+ + S++ + + F + + W L I L
Sbjct: 130 SCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQGMLKSWLGGESIYGGLGITLGLIFW 189
Query: 416 AYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAA 475
+P A ++ S+ L EA+ L S +F V LP G++ A I F +
Sbjct: 190 TFPHALMILTTSLSTSDARLYEAARALKTSPIKTFFIVTLPAAKYGLISALIVVFTLVVC 249
Query: 476 ELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFL 523
+ ++ N T + + + F + S+VL++ ++ +F+
Sbjct: 250 DFGVPKVIGGSYNVLATDIFKQVVGQQNFAMGAVTSIVLLLPAVFAFI 297
>gb|AAG19354.1| (AE005030) iron transporter-like protein; SfuB [Halobacterium sp.
NRC-1]
Length = 537
Score = 124 bits (309), Expect = 2e-27
Identities = 128/502 (25%), Positives = 203/502 (39%), Gaps = 38/502 (7%)
Query: 39 FSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLIT 98
+ L L V +D V+ + L T+ + VG+P A + D PG+R +
Sbjct: 51 YGLGHFLDVFADTSSLDVLVNSLSLVGLVTVGCVLVGVPLAVLTVQTDLPGRRAWTIIAA 110
Query: 99 VPFVMPSVIVALGFIIIFGKSGPL-GGLGI--------LYNWKAIILAHVFYNYPVVVRV 149
+P V+PS I A F+ FG G L G LG+ +Y L + + YP V
Sbjct: 111 LPLVVPSYIGAFTFVSAFGPRGDLAGALGVIGIERIPSIYGLHGAALVLILFTYPYVFLT 170
Query: 150 IASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLIL 209
++ + EAA +L + FR+IT+P +LP + LL + F P I+
Sbjct: 171 TRAALLSFDGTLVEAARTLNHSRWQAFRRITVPQILPGVAAGGLLAALYALSDFGTPSIM 230
Query: 210 GGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRVLI 269
+Y IF + L + +L IQL ++ I R
Sbjct: 231 ---RYEVYTQQIFVAQGSLGVPEGYPALLSIQLLAVVAVVLALESRIGDGDTAYVSRGAS 287
Query: 270 AKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSE--EYNP 327
R+ L + L + + V + V+ WF+RA E++P
Sbjct: 288 QPGRVSLGVWKWPALAFCTAIAVLSLGVPLGVL-----------AWWFQRAGDAIFEFDP 336
Query: 328 MFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVM 387
M N+LK A +A +LALP+A AR R + + + A V+
Sbjct: 337 MIA-------WNSLKVAVAAAGVATVLALPVAGYAARSSSRLSMVSDRLTYVGYAIPGVV 389
Query: 388 LGLGYLLAFRDT----SLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLG 443
+ L L F T SL L+ A+ P A ++ S+ ++ L EA+ TLG
Sbjct: 390 IALS--LVFLSTEFVQSLVKTVPLLVFAYVVRFLPQAVGSVRSSVLQVDPKLTEAARTLG 447
Query: 444 ASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQ 503
S +F V LPLI G+ + F + EL T ML TL I+ +
Sbjct: 448 RSSTDAFRSVTLPLIAPGVAAGAALVFLTTMKELPATLMLRPIGFETLVSYIWLVRGAGS 507
Query: 504 FGPASALSVVLMIISMVSFLLI 525
+G A+ ++VL+ +S +S ++I
Sbjct: 508 YGAAAVPALVLVGVSALSMVVI 529
>sp|P55452|Y4FN_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4FN
>gi|2182397|gb|AAB91670.1| (AE000073) Y4fN [Rhizobium
sp. NGR234]
Length = 569
Score = 119 bits (296), Expect = 7e-26
Identities = 117/545 (21%), Positives = 230/545 (41%), Gaps = 31/545 (5%)
Query: 14 GLILIPMLLLLSLFYVPMVRVISLGF----SLTSLLSVLSDEYYRRVIAFTFVQALLSTL 69
GLI+I +L L VPM+ + SL +V RRV A + ++
Sbjct: 15 GLIVIAWAVLTFLL-VPMLAALQAALFRLGSLAMFDAVSELARSRRVRAALWNTVWMTAA 73
Query: 70 ATLAVGIPGAY---VFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL-GGL 125
TL V I G + V ++ PG+ FL+ + P V V+ A G+ +G SG + L
Sbjct: 74 TTLTVTIVGMFQVAVLEYFRVPGRGFLKIAFSTPLVFGGVVAAAGYNFTYGPSGAITAAL 133
Query: 126 GILY---------NWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVF 176
L+ W ++ AH F + ++ R++ EAA S+GA +
Sbjct: 134 AALFPSLPRDWFIGWFGVLFAHTFLMTSFHFLFLRAAMRRVDYSTIEAARSMGASEMTIL 193
Query: 177 RKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATI-EVAIFSSAMMLLDFKTSS 235
R + LP++LP++L +LLT SF+ P +LGG + + ++ + +++ D
Sbjct: 194 RCVVLPVILPTVLAVTLLTLITAMGSFAAPQVLGGRDFHMLSQMVLTLNSLRRPDMAALL 253
Query: 236 SLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFII 295
+L + + + IL+ Y + Y+ + I + ++ + I + + +
Sbjct: 254 ALLMGLVLMGLILLSQYFEAKGAYTAGAKATTRIQLRAIRNPLARIVVTALAYLLAAIYL 313
Query: 296 SPLFAVIYKALMFNDRLSLEWFRRAF--SEEYNPMFGTSSLMTILNTLKFGFIAVLIAVI 353
P+ ++ + + ++ +F + + G ++ + N++ IAV + +
Sbjct: 314 MPVALIVLFSFAPASSIGIDVLPSSFTLANYARVLGGGAAFVPFFNSMLMSSIAVAVGLA 373
Query: 354 LALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAF-------RDTSLYGHWL 406
+ L ++ R++ L++ LP +++L +G ++AF + L G +
Sbjct: 374 ITLFAVPIMVRKRNWLTRGLDICFVLPWIIPTMLLAVGLIVAFDAPNPLVGNLVLLGSYW 433
Query: 407 LIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVAS 466
L+ + + + P R + + I EA+ +GAS +V LPL+ ++ +
Sbjct: 434 LLPIGYVIFSLPLMVRFMRSAFIGIDPAFDEAARAMGASGPYRLRRVVLPLVAPTAILVA 493
Query: 467 IFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSV---VLMIISMVSFL 523
F AE + L + N L +AI S A+ V ++M S+ L
Sbjct: 494 GMKFNNLLAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAVSLVYVTLIMAFSLAVIL 553
Query: 524 LIERI 528
+ ER+
Sbjct: 554 IAERL 558
>dbj|BAB04233.1| (AP001508) iron (III) transport system (permease) [Bacillus
halodurans]
Length = 553
Score = 117 bits (290), Expect = 3e-25
Identities = 120/517 (23%), Positives = 228/517 (43%), Gaps = 48/517 (9%)
Query: 26 LFYVPMVRVI--SLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFS 83
L +P+V V+ SL L +L D +++ T ++ TL +A+G+ A++ +
Sbjct: 50 LMAIPIVYVVWESLFAGADRWLRLL-DTRIPQLLWNTLSLTVMVTLFAVAIGVSLAWLVN 108
Query: 84 HYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL--------------GGLGI-L 128
PG++ + L+ +P V+P + A+ +IIIFG G L G I +
Sbjct: 109 RTSLPGRKMWQWLLALPLVIPPYVGAVTYIIIFGPRGWLWRYWKQEEWLQQRFGDYPIDV 168
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
Y + I + YP V + +S ++N +++E A + G VF ++ LP L P+I
Sbjct: 169 YTFAGIFFVLTMFTYPYVYLIAGASLRKMNRNFEEVARAQGMTTGQVFWRVNLPFLRPAI 228
Query: 189 LVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAIL 248
++L + F ++ +Y T AI+ M D +++ L+++ + ++ I+
Sbjct: 229 GAGAILVALYVLSDFGAIAMM---RYTTFTAAIYYQ-MGSYDNVSATVLSVVLILLTLII 284
Query: 249 MYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIIS---PLFAVIYKA 305
++I A+ R ++ Q + L + +F VF IS P+ ++Y
Sbjct: 285 LWIEAR--TRKKQKYYQTTNSYHEPEILSLGKWKWPAFFFVAGVFTISVLLPVIVLVYWT 342
Query: 306 L--MFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIA 363
+ + L +++ A+ N+LK +A L ++LALP+ + +
Sbjct: 343 VIGVGGGVLDAKFWGYAW-----------------NSLKVSGLAALFCMLLALPVVYLRS 385
Query: 364 REKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD--TSLYGHWLLIALAHATVAYPFAF 421
R + +E + A V++ LG + F LY + LIA+A P A
Sbjct: 386 RYPSKVSHFIEKLSYAGYALPGVIVALGIIYLFNQYIPVLYNTFYLIAIAFVVRFLPQAM 445
Query: 422 RTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTY 481
++ S+ I + EA+ +LG V +P I+ G+L F S EL T
Sbjct: 446 QSTDASLSLISPRIDEAARSLGQPPWKVMFTVIIPSILPGVLAGGALVFVSSIKELPATL 505
Query: 482 MLASPENTTLTLAIYKFISSRQFGPASALSVVLMIIS 518
+L P TL + I+ S + A+ +++++++S
Sbjct: 506 LLRPPGFDTLAVRIWVETSEATYYTAAPAALLIVLVS 542
Score = 69.5 bits (167), Expect = 9e-11
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 6/190 (3%)
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL 125
L+ L + + +P Y+ S Y F+ L + +P VIVALG I +F + P
Sbjct: 368 LAALFCMLLALPVVYLRSRYPSKVSHFIEKLSYAGYALPGVIVALGIIYLFNQYIP---- 423
Query: 126 GILYN-WKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLL 184
+LYN + I +A V P ++ +S I+P EAA SLG + V + +P +
Sbjct: 424 -VLYNTFYLIAIAFVVRFLPQAMQSTDASLSLISPRIDEAARSLGQPPWKVMFTVIIPSI 482
Query: 185 LPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTI 244
LP +L L F L+L + T+ V I+ + + + LI L
Sbjct: 483 LPGVLAGGALVFVSSIKELPATLLLRPPGFDTLAVRIWVETSEATYYTAAPAALLIVLVS 542
Query: 245 SAILMYIYAK 254
+ L Y+ K
Sbjct: 543 ALPLRYLLKK 552
>pir||T34596 probable membrane protein - Streptomyces coelicolor
>gi|2815337|emb|CAA16461.1| (AL021529) SC10A5.29c,
probable integral membrane protein, len: 589 aa; similar
to many permeases eg. TR:Q44123 (EMBL:U050 42) iron
utilisation protein AFUB from Actinobacillus pleur
opneumoniae (687 aa), fasta scores; opt: 564 z-score:
426.3 E(): 1.5e>
Length = 589
Score = 115 bits (286), Expect = 1e-24
Identities = 117/514 (22%), Positives = 220/514 (42%), Gaps = 45/514 (8%)
Query: 39 FSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLIT 98
F+L++ + + + ++ T + A+L+T+ LA+ +P A + FP R ++
Sbjct: 74 FTLSNYTHLFTSAGFGSIVLDTLLFAVLTTVFALAIAVPMAILLERTRFPAARLFGQVLR 133
Query: 99 VPFVMPSVIVALGFIIIFGKSGPLGGL---------GILYNWKAIILAHVFYNYPVVVRV 149
P + +++A G+I+++G +G L G LY+ + P+
Sbjct: 134 WPIYISPLVLAFGWIVVYGPAGFLTGAVREGFGWVPWNLYSLPGMAFVEAVAQVPIAYLF 193
Query: 150 IASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLIL 209
A++ + + AA S+GA V R + +P+L P +L A LL F + SIPLIL
Sbjct: 194 CANALAASDTSLENAARSVGAGPLRVLRSVVVPMLRPPMLYAGLLIFGTAIETLSIPLIL 253
Query: 210 GGYKYATIEVAIFSSAM-------MLLDFKTSSSLALIQLTISAILMYIYAKLIERYSRE 262
G + +FS+ + + D+ + + L + L+ +L+ R
Sbjct: 254 G----EPAGITLFSNFLYEQGIDSINPDYGLLGAASTFMLLTTIALVVFQTRLLGHAQRF 309
Query: 263 EEQRVLIAKKRLKLDIEGIAILVYFIFVLVFII----SPLFAVIYKAL------MFN--D 310
R + L LDI G + F FV ++++ P+ A+I +A + N D
Sbjct: 310 VSVRGKATRSDL-LDI-GAWKWLGFAFVGLYVVFGALLPMLALILRAFTSLLTPLVNPFD 367
Query: 311 RLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGK 370
L+L+ FR F +Y P +I+N++ F+ + + + V R FR
Sbjct: 368 LLTLDNFRLIF--DYAPY-----TESIVNSITVAFVGAVAVTLFGTVVVLVARRSDFRFA 420
Query: 371 GLLEVFATLPLASSSVMLGLGYLLAFR----DTSLYGHWLLIALAHATVAYPFAFRTISI 426
LLE A P A +++G+G AF ++ G + +A A P A+ IS
Sbjct: 421 RLLETTAQSPHAVPGLIVGIGLFWAFTWIPGGDAVRGTLFALIIAFGIRALPSAYGAISP 480
Query: 427 SIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASP 486
+ ++ L A+ GA + ++ L L+V +L + + + E A LA
Sbjct: 481 ATMQLGAELDNAARVAGADWWRTVSRIMLRLLVPAMLASFLLIWTQMIREYAPAMFLAGA 540
Query: 487 ENTTLTLAIYKFISSRQFGPASALSVVLMIISMV 520
E+ + + + G +AL+ + + ++ V
Sbjct: 541 ESQVIGTTAIDLWTQGETGSVAALATLQIAVTAV 574
>pir||G81929 probable iron-uptake permease inner membrane protein NMA0843
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379559|emb|CAB84124.1| (AL162754) putative
iron-uptake permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 509
Score = 115 bits (284), Expect = 2e-24
Identities = 124/540 (22%), Positives = 230/540 (41%), Gaps = 55/540 (10%)
Query: 3 SDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFV 62
S +I + + ++LI + L L YV M S + + +L +++ T
Sbjct: 6 SPKKIPIWLTGLILLIALPLTLPFLYVAMR---SWQVGINRAVELLFRPRMWDLLSNTLT 62
Query: 63 QALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFI-IIFGKSGP 121
TL ++ +GI A +F Y F GK F ++ IT+P +P+ + +I + F G
Sbjct: 63 MMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAFVSCFTWISLTFRVEGF 122
Query: 122 LGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITL 181
G + I+ ++P+ + ++ +RI+ YKE ++SLG F L
Sbjct: 123 WGTVMIM----------SLSSFPLAYLPVEAALKRISLSYKEVSLSLGKSRLQTFFSAIL 172
Query: 182 PLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQ 241
P L P+I + LL + F IL Y T AIF M + T++ L+ +
Sbjct: 173 PQLKPAIGSSVLLIALHMLVEFGAVSIL---NYPTFTTAIFQEYEMSYNNNTAALLSAVL 229
Query: 242 LTISAILMY---IYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPL 298
+ + I+++ I+ + Y + K L L + AI+ + + II P
Sbjct: 230 MAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLNLPGQIGAIVFLSSLLTLGIIIPF 289
Query: 299 FAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTI----LNTLKFGFIAVLIAVIL 354
+I+ W S GT +L+++ + +L + ++ ++
Sbjct: 290 GVLIH------------WMMVGTS-------GTFALVSVFDAFIRSLSVSALGAVLTILC 330
Query: 355 ALPLARVIAREK-------FRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL 407
ALPL R + R LL L +A S V + Y A +Y +++
Sbjct: 331 ALPLVWASVRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPA-----VYQTFIV 385
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ LA+ + P A T+ S+ ++ K + + TLG F + LP I+ GI A
Sbjct: 386 VILAYFMLYLPMAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFA 445
Query: 468 FSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
F EL T +L + + TL+ A++++ S Q+ A+ +++L++ S + L+++
Sbjct: 446 LVFLKLMKELTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKK 505
>pir||T10887 iron utilization protein B - Haemophilus influenzae (fragment)
>gi|11385315|pir||D64048 iron (III) ABC transporter,
permease protein hitB [validated] - Haemophilus
influenzae (strain Rd KW20) >gi|619399|gb|AAB32111.1|
(S72674) HitB=iron utilization protein [Haemophilus
influenzae, type b, DL42, NTHI TN106, Peptide, 506 aa]
Length = 506
Score = 113 bits (280), Expect = 5e-24
Identities = 116/520 (22%), Positives = 227/520 (43%), Gaps = 37/520 (7%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
+ILI + L L YV ++R +G LT + +L +++ T + + T+ +++
Sbjct: 13 IILIGLPLCLPFLYV-ILRATEVG--LTRSVELLFRPRMAELLSNTMLLMVCVTIGAISL 69
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFI-IIFGKSGPLGGLGILYNWKA 133
G A++ Y F GK F +T+P +P+ + +I + F G G +GI+
Sbjct: 70 GTLCAFLLERYRFFGKAFFEVAMTLPLCIPAFVSCFTWISLTFRVEGFWGTIGIM----- 124
Query: 134 IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASL 193
++P+ +++ +R++ +E ++SLG F P L P+I + L
Sbjct: 125 -----TLSSFPLAYLPVSAILKRLDRSLEEVSLSLGKSPVYTFWYAIFPQLKPAIGSSIL 179
Query: 194 LTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYA 253
L + F IL Y T AIF M + T++ L+ + + I ++++
Sbjct: 180 LIALHMLVEFGAVSILN---YQTFTTAIFQEYEMSFNNSTAALLSAVLMAICILIVFGEI 236
Query: 254 KLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIIS---PLFAVIYKALMFND 310
+ + + ++ +K G L + F +FI+S P+ +IY ++
Sbjct: 237 FFRGKQTLYHSGKGVMRPYLVKTLSFGKQCLTFGFFSSIFILSIGVPVIMLIYWLIVGTS 296
Query: 311 RLS---LEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKF 367
S F AFS + + G +L+T++ L + AV L + + R+
Sbjct: 297 LESAGDFSEFLSAFSNSFI-ISGLGALLTVMCALPLVWAAVRYRSYLTIWIDRL------ 349
Query: 368 RGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISIS 427
LL L +A S V + Y LY + +I +A+ + P A T+ S
Sbjct: 350 --PYLLHAVPGLVIALSLVYFSIHYA-----NDLYQTFFVIIIAYFMLYLPMAQTTLRAS 402
Query: 428 IRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPE 487
+ ++ + + +LG + F + LP I+ G+ A F EL T +L S +
Sbjct: 403 LEQLSDQIEKVGQSLGRNPFYIFRTLTLPAILPGVAAAFALVFLNLMKELTATLLLTSND 462
Query: 488 NTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
TL++A+++ S Q+ A+ +++L++ S + L+++
Sbjct: 463 IKTLSIAVWEHTSDAQYAAATPYALMLVLFSGIPVFLLKK 502
>pir||T36640 probable ABC-type transport system membrane protein - Streptomyces
coelicolor >gi|5019355|emb|CAB44408.1| (AL078610)
putative ABC transporter membrane subunit [Streptomyces
coelicolor A3(2)]
Length = 283
Score = 109 bits (270), Expect = 8e-23
Identities = 60/244 (24%), Positives = 131/244 (53%), Gaps = 13/244 (5%)
Query: 16 ILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVG 75
+L+P L+ L+ +P+V ++ + S+ +L+ + + + + A +T+ ++ +G
Sbjct: 32 LLVPALIGLAFLVLPLVALL-IRAPWASMPELLTSTEVWQALRLSLICATAATVVSMVIG 90
Query: 76 IPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG-------GLGIL 128
+P A++ + +FPG+ +R+L+T+P V+P V+ + ++ G++G +G G+ +
Sbjct: 91 VPLAWLLARVEFPGRGLVRALVTLPLVLPPVVGGVALLMALGRNGVVGQWLDSWFGITLP 150
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
+ +ILA F P +V + + +P Y+EAA +LGA F FR++TLPL+ P I
Sbjct: 151 FTTTGVILAEAFVAMPFLVISVEGTLRAADPRYEEAATTLGASRFTAFRRVTLPLIAPGI 210
Query: 189 LVASLLTFTFCFMSFSIPLILGGY---KYATIEVAIFSSAMMLLDFKTSSSLALIQLTIS 245
++L + F + G + T+ +A++ + + D + + +L+L+ L +S
Sbjct: 211 AAGAVLAWARALGEFGATITFAGNFPGRTQTMPLAVYLA--LQSDPEAAVALSLVLLAVS 268
Query: 246 AILM 249
++
Sbjct: 269 VAVL 272
Score = 91.3 bits (223), Expect = 2e-17
Identities = 75/262 (28%), Positives = 122/262 (45%), Gaps = 45/262 (17%)
Query: 281 IAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMT---I 337
+ +LV + L F++ PL A++ +A P L+T +
Sbjct: 30 LPLLVPALIGLAFLVLPLVALLIRA---------------------PWASMPELLTSTEV 68
Query: 338 LNTLKFGFI----AVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYL 393
L+ I A ++++++ +PLA ++AR +F G+GL+ TLPL V+ G+ L
Sbjct: 69 WQALRLSLICATAATVVSMVIGVPLAWLLARVEFPGRGLVRALVTLPLVLPPVVGGVALL 128
Query: 394 LAFRDTSLYGHWL-------------LIALAHATVAYPFAFRTISISIRKIKKNLLEASL 440
+A + G WL + LA A VA PF ++ ++R EA+
Sbjct: 129 MALGRNGVVGQWLDSWFGITLPFTTTGVILAEAFVAMPFLVISVEGTLRAADPRYEEAAT 188
Query: 441 TLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS--PENT-TLTLAIYK 497
TLGAS +F +V LPLI GI ++ ++A + E T A P T T+ LA+Y
Sbjct: 189 TLGASRFTAFRRVTLPLIAPGIAAGAVLAWARALGEFGATITFAGNFPGRTQTMPLAVYL 248
Query: 498 FISSRQFGPASALSVVLMIISM 519
+ S A ALS+VL+ +S+
Sbjct: 249 ALQSDP-EAAVALSLVLLAVSV 269
>sp|P16702|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|145660|gb|AAA23638.1| (M32101) sulfate permease
[Escherichia coli] >gi|1799842|dbj|BAA16297.1| (D90871)
sulfate/thiosulfate transport protein cysW [Escherichia
coli] >gi|1799852|dbj|BAA16306.1| (D90872)
sulfate/thiosulfate transport protein cysW [Escherichia
coli]
Length = 291
Score = 109 bits (270), Expect = 8e-23
Identities = 74/262 (28%), Positives = 134/262 (50%), Gaps = 11/262 (4%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFS--LTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
LI I ML+ + VPM+ + FS L +L L+D I T + AL++ L
Sbjct: 22 LIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNL 81
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG------LG 126
GI A++ + ++FPG++ L +L+ +PF + V+ L +++ +G +GPLGG L
Sbjct: 82 VFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQ 141
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I+++W ++L +F P VVR + EAA+ LGA G+ +FR++TLP +
Sbjct: 142 IMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRW 201
Query: 187 SILVASLLTFTFCFMSF-SIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSL-ALIQLTI 244
++L +LT F ++ ++ G + T+ + + ++ D+ T S A LT+
Sbjct: 202 ALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPL-QIELLEQDYNTVGSFTAAALLTL 260
Query: 245 SAILMYIYAKLIERYSREEEQR 266
AI+ +++ +E+R
Sbjct: 261 MAIITLFLKSMLQWRLENQEKR 282
>sp|P71338|HITB_HAEIN IRON(III)-TRANSPORT SYSTEM PERMEASE PROTEIN HITB
Length = 506
Score = 108 bits (266), Expect = 2e-22
Identities = 115/520 (22%), Positives = 225/520 (43%), Gaps = 37/520 (7%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
+ILI + L L YV ++R +G LT + +L +++ T + + T+ +++
Sbjct: 13 IILIGLPLCLPFLYV-ILRATEVG--LTRSVELLFRPRMAELLSNTMLLMVCVTIGAISL 69
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFI-IIFGKSGPLGGLGILYNWKA 133
G A++ Y F GK F +T+P +P+ + +I + F G +GI+
Sbjct: 70 GTFCAFLLERYRFFGKAFFEVAMTLPLCIPAFVSGFTWISLTFRVEVFWGTIGIM----- 124
Query: 134 IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASL 193
++P+ +++ +R++ +E ++SLG F P L P+I + L
Sbjct: 125 -----TLSSFPLAYLPVSAILKRLDRSLEEVSLSLGKSPVYTFWYAISPQLKPAIGSSIL 179
Query: 194 LTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYA 253
L + F IL Y T AIF M + T++ L+ + + I ++++
Sbjct: 180 LIALHMLVEFGAVSILN---YQTFTTAIFQEYEMSFNNSTAALLSAVLMAICILIVFGEI 236
Query: 254 KLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIIS---PLFAVIYKALMFND 310
+ + + + +K G L + F +FI+S P+ +IY ++
Sbjct: 237 FFRGKQTLYHSGKGVTRPYLVKTLSFGKQCLTFGFFSSIFILSIGVPVIMLIYWLIVGTS 296
Query: 311 RLS---LEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKF 367
S F AFS + + G +L+T++ L + AV L + + R+
Sbjct: 297 LESAGDFSEFLSAFSNSFI-ISGLGALLTVMCALPLVWAAVRYRSYLTIWIDRL------ 349
Query: 368 RGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISIS 427
LL L +A S V + Y LY + +I +A+ + P A T+ S
Sbjct: 350 --PYLLHAVPGLVIALSLVYFSIHYA-----NDLYQTFFVIIIAYFMLYLPMAQTTLRAS 402
Query: 428 IRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPE 487
+ ++ + + +LG + F + LP I+ G+ A F EL T +L S +
Sbjct: 403 LEQLSDQIEKVGQSLGRNPFYIFRTLTLPAILPGVAAAFALVFLNLMKELTATLLLTSND 462
Query: 488 NTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
TL++A+++ S Q+ A+ +++L++ S + L+++
Sbjct: 463 IKTLSIAVWEHTSDAQYAAATPYALMLVLFSGIPVFLLKK 502
>pir||E81435 probable iron-uptake ABC transport system permease protein Cj0174c
[imported] - Campylobacter jejuni (strain NCTC 11168)
>gi|6967667|emb|CAB72657.1| (AL139074) putative
iron-uptake ABC transport system permease protein
[Campylobacter jejuni]
Length = 538
Score = 107 bits (264), Expect = 4e-22
Identities = 116/541 (21%), Positives = 227/541 (41%), Gaps = 47/541 (8%)
Query: 14 GLILIPMLLLLSLF--YVPMVRVISLGFSLTSL---------LSVLSDEYYRRVIAFTFV 62
G IL+ + L L +F + + ++ F+ + L LS D + + I TF+
Sbjct: 11 GAILLALFLALPIFGIFAELFYILFQNFNTSDLTQFSSIKENLSHFFDYLFLKFIKDTFI 70
Query: 63 QALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG-- 120
++ +L +G+ AY+ ++YDF + L L+ +P +P+ I+A ++ I G
Sbjct: 71 ISMGVLCLSLILGVSSAYLIANYDFYFCKILEKLLILPLAIPAYILAFVYVGIMDFQGFF 130
Query: 121 --PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRK 178
G +N +I YP + ++++ E A + F +F +
Sbjct: 131 HENFGFRIDFFNHYGVIFVLAISLYPYIYLFAKTAFKSEAKEAYEVAKIMKYSEFRIFTR 190
Query: 179 ITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLA 238
+ L P+I +LL + LG T IF L D +SS L+
Sbjct: 191 VALLSARPAIFSGALLVLMETLSDYGASAYLG---VDTFSAGIFKLWYDLNDSYSSSVLS 247
Query: 239 LIQLTISAILMYI--YAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIIS 296
I + ++MY+ Y K YS + + I K++L + ++ + F+ V I
Sbjct: 248 GILMLFVFLIMYVDYYYKNKHHYSFNQNLALFIKKRKLNPIKQILSCIYCFMIAFVGFIL 307
Query: 297 PLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILA- 355
P ++Y L + + +F + + T+ I LI LA
Sbjct: 308 PFIWLVYWGL-----------------KDHKLFESQFYIISFQTIILALITALITTFLAY 350
Query: 356 -LPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHAT 414
L + I + F +L++ ++L + + LG+ ++ F + H L+ +
Sbjct: 351 FLMFSSRIVKNHFFNLFILKI-SSLGYSIPAAALGISIIVLFVFLDKFFHMSLLGNSLLV 409
Query: 415 VAYPFAFRTISISI-------RKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ + + R ++ +I KI N+ EASL L S + F K+ PL+ + + +A I
Sbjct: 410 LVFAYIIRFLASAIYSLEGGYNKIHLNIDEASLNLRTSYFILFFKIHTPLMKHFLFLAFI 469
Query: 468 FSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
F + EL + +LA TL++ + F S + A+ S+ ++ +S++ + +++
Sbjct: 470 IVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYDAALPSLFIVFLSLMVVVWMDK 529
Query: 528 I 528
I
Sbjct: 530 I 530
>pir||B82310 sulfate ABC transporter, permease protein VC0540 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654968|gb|AAF93708.1| (AE004140) sulfate ABC
transporter, permease protein [Vibrio cholerae]
Length = 287
Score = 104 bits (257), Expect = 3e-21
Identities = 66/261 (25%), Positives = 128/261 (48%), Gaps = 8/261 (3%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFS--LTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
LI + +LL+ L +P++ + F+ +++ S +D R I T V ALL+ L
Sbjct: 19 LIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIGLTLVVALLTVPINL 78
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLG 126
G+ +++ + ++F G++FL +LI +PF + V+ L +++++G SG LG L
Sbjct: 79 VFGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWLGEWLYERDLQ 138
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I++ W I+L VF P V R + ++ +EAA+ LGA + +FR++TLP +
Sbjct: 139 IMFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAVILGASWWQLFRRVTLPNIKW 198
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
+++ +LT F ++ G ++ D+++ ++ A L
Sbjct: 199 ALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLYEDYQSQAAFASASLLAFI 258
Query: 247 ILMYIYAKLIERYSREEEQRV 267
L+ + K + + +E Q V
Sbjct: 259 ALLTLLLKALVEWRQERLQAV 279
>pir||H83568 probable permease of ABC transporter PA0606 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946480|gb|AAG03995.1|AE004497_2 (AE004497) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 276
Score = 104 bits (257), Expect = 3e-21
Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 4/239 (1%)
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSS--LMTILNTLKFGFIA 347
VL+F++ P+ ++ L FN L + + FS + F S+ + ++ N++ A
Sbjct: 24 VLLFLVLPVLVIV--PLSFNSGTFLVYPLQGFSLRWYADFFQSAEWMRSLTNSMIVAPAA 81
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL 407
L+A++ A + R +FRGK L+ P+ V++G+ L F L +L
Sbjct: 82 TLLAMVFGTLAAIGLTRGEFRGKALVMSLMISPMVVPVVIIGVASYLFFAPLGLGNSYLS 141
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ + HA + PF T+S +++ NL+ A+ +LGA +F +V LPLI G++ ++
Sbjct: 142 LIVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAPGVISGAL 201
Query: 468 FSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIE 526
F+FA S E+ T LA PE TL ++ I +A + +L+ S++ L +E
Sbjct: 202 FAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIGFSVLLLLTLE 260
Score = 83.9 bits (204), Expect = 4e-15
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
L+++P+ F V ++ GFSL + R + + + A +TL +
Sbjct: 33 LVIVPLSFNSGTFLVYPLQ----GFSLRWYADFFQSAEWMRSLTNSMIVAPAATLLAMVF 88
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAI 134
G A + +F GK + SL+ P V+P VI+ + + F LG+ ++ ++
Sbjct: 89 GTLAAIGLTRGEFRGKALVMSLMISPMVVPVVIIGVASYLFFAP------LGLGNSYLSL 142
Query: 135 ILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLL 194
I+ H P V+ ++++ + N + AA SLGA F ++TLPL+ P ++ +L
Sbjct: 143 IVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAPGVISGALF 202
Query: 195 TFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILM 249
F F + L L G + AT+ +FS L T ++ A + + S +L+
Sbjct: 203 AFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLS-PTIAAAATLLIGFSVLLL 256
>gi|11499198 spermidine/putrescine ABC transporter, permease protein (potC)
[Archaeoglobus fulgidus] >gi|7446692|pir||E69450
spermidine/putrescine ABC transporter, permease protein
(potC) homolog - Archaeoglobus fulgidus
>gi|2648949|gb|AAB89639.1| (AE000991)
spermidine/putrescine ABC transporter, permease protein
(potC) [Archaeoglobus fulgidus]
Length = 242
Score = 104 bits (256), Expect = 3e-21
Identities = 66/240 (27%), Positives = 120/240 (49%), Gaps = 15/240 (6%)
Query: 21 LLLLSLFYVPMVRVISL-----GFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVG 75
+ + + Y+P+V +I+L GF+L + ++L D + ALLST+ ++ +G
Sbjct: 8 IAVFAFLYIPIVIMIALSFYDDGFTLRNYQALLEDREIVSAFFNSIGVALLSTIISVILG 67
Query: 76 IPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAII 135
AY F I +P + +V + L FI+ LG + +++
Sbjct: 68 TLAAYAFMRDQISFSALFYPPIIIPEITEAVSLLLFFIV----------LGFPLGFYSVL 117
Query: 136 LAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLT 195
+ H +N V ++++ + ++EA+ LGA F FRK+TLPLL+P I+ ASL+
Sbjct: 118 IGHTAFNIAFVFVIVSARGANLRREFEEASYILGANEFQTFRKVTLPLLMPGIIAASLIA 177
Query: 196 FTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKL 255
FT + +F + G + T+ + I+S A + T ++LA + + IS +L YIY ++
Sbjct: 178 FTLSWDNFIKTVFTTGPGFETLPLIIWSQAARGVVSPTINALASLMIVISLLLSYIYVRI 237
>gi|10954681 probable mikimopine transporter gene~similar to motC gene
[Agrobacterium rhizogenes] >gi|8918681|dbj|BAA97746.1|
(AB039932) hypothetical ABC-transporter gene~similar to
motC gene [Agrobacterium rhizogenes]
>gi|10567345|dbj|BAB16154.1| (AP002086) probable
mikimopine transporter gene~similar to motC gene
[Agrobacterium rhizogenes]
Length = 283
Score = 102 bits (251), Expect = 1e-20
Identities = 67/277 (24%), Positives = 137/277 (49%), Gaps = 26/277 (9%)
Query: 12 RKGLILIPMLLLLSLFYV-PMVRVISLGF-------------SLTSLLSVLSDEYYRRVI 57
+ G++ +P + +L+ F++ P++ V L F +L++ L D YY +
Sbjct: 3 KPGILFLPAITILAAFFILPLIWVFVLSFMGSGPTGEVLNAFTLSNYARFLGDSYYLNDL 62
Query: 58 AF-TFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIF 116
+ T A ++T ++ +G GA++ + + +L L+ +P + V+ L +++
Sbjct: 63 LWRTIRMAAIATAFSVVIGYLGAFLIVRAEPRIQTWLILLVMLPLWVNLVVRTLSLMVVL 122
Query: 117 GKSGPLGG-----------LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAA 165
G++GP+ L +LY ++I+ + P VV I + I + AA
Sbjct: 123 GRTGPVNQFLVAIGITDRPLALLYTETSVIIGMIQVAVPFVVMSIYGVLQSIPRQLEHAA 182
Query: 166 MSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSA 225
M++GA FR++TLPL +P IL S+L F SF +P++LGG + + VA + +A
Sbjct: 183 MTVGAPPVQAFRRVTLPLSMPGILAGSVLAFGINVESFVVPILLGGGRVRFMSVAAYETA 242
Query: 226 MMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSRE 262
+ + ++++ +I L ++ +++ Y I +R+
Sbjct: 243 TVSNNLPFAATIGVILLIVTMVMLAAYQWAIHSANRQ 279
>gb|AAC21774.1| (U32695) iron(III) ABC transporter, permease protein (hitB)
[Haemophilus influenzae Rd]
Length = 473
Score = 101 bits (250), Expect = 2e-20
Identities = 106/494 (21%), Positives = 211/494 (42%), Gaps = 34/494 (6%)
Query: 41 LTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVP 100
LT + +L +++ T + + T+ +++G A++ Y F GK F +T+P
Sbjct: 3 LTRSVELLFRPRMAELLSNTMLLMVCVTIGAISLGTFCAFLLERYRFFGKAFFEVAMTLP 62
Query: 101 FVMPSVIVALGFI-IIFGKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINP 159
+P+ + +I + F G +GI+ ++P+ +++ +R++
Sbjct: 63 LCIPAFVSGFTWISLTFRVEVFWGTIGIM----------TLSSFPLAYLPVSAILKRLDR 112
Query: 160 HYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEV 219
+E ++SLG F P L P+I + LL + F IL Y T
Sbjct: 113 SLEEVSLSLGKSPVYTFWYAISPQLKPAIGSSILLIALHMLVEFGAVSILN---YQTFTT 169
Query: 220 AIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIE 279
AIF M + T++ L+ + + I ++++ + + + + +K
Sbjct: 170 AIFQEYEMSFNNSTAALLSAVLMAICILIVFGEIFFRGKQTLYHSGKGVTRPYLVKTLSF 229
Query: 280 GIAILVYFIFVLVFIIS---PLFAVIYKALMFNDRLS---LEWFRRAFSEEYNPMFGTSS 333
G L + F +FI+S P+ +IY ++ S F AFS + + G +
Sbjct: 230 GKQCLTFGFFSSIFILSIGVPVIMLIYWLIVGTSLESAGDFSEFLSAFSNSFI-ISGLGA 288
Query: 334 LMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYL 393
L+T++ L + AV L + + R+ LL L +A S V + Y
Sbjct: 289 LLTVMCALPLVWAAVRYRSYLTIWIDRL--------PYLLHAVPGLVIALSLVYFSIHYA 340
Query: 394 LAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKV 453
LY + +I +A+ + P A T+ S+ ++ + + +LG + F +
Sbjct: 341 -----NDLYQTFFVIIIAYFMLYLPMAQTTLRASLEQLSDQIEKVGQSLGRNPFYIFRTL 395
Query: 454 ELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVV 513
LP I+ G+ A F EL T +L S + TL++A+++ S Q+ A+ +++
Sbjct: 396 TLPAILPGVAAAFALVFLNLMKELTATLLLTSNDIKTLSIAVWEHTSDAQYAAATPYALM 455
Query: 514 LMIISMVSFLLIER 527
L++ S + L+++
Sbjct: 456 LVLFSGIPVFLLKK 469
>gb|AAB95373.1| (U75349) putative permease BitE [Brachyspira hyodysenteriae]
Length = 277
Score = 101 bits (248), Expect = 3e-20
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 12/242 (4%)
Query: 23 LLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVF 82
L SLF + ++L + L S +YY + + +F + T+ + +G P AY
Sbjct: 29 LFSLFISSFKDPETGAWTLDNFLRFFSRKYYYQALVNSFSVTICVTILAIVIGTPMAYFM 88
Query: 83 SHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL----GGLGI----LYNWKAI 134
S Y GK FL LI + + P+ I A +I++ G+SG + G GI +Y + I
Sbjct: 89 SVYKIKGKTFLEILIIISMMSPAFIGAYSWILLLGRSGVVTKFFAGFGISTPTIYGFGGI 148
Query: 135 ILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLL 194
+L YP + ++ + +I+ EAA SLG F I +PL+ P+IL SLL
Sbjct: 149 LLVFTLKLYPFIFMYVSGALSKIDVSLMEAAESLGCSPFKKVVTIAMPLITPTILAGSLL 208
Query: 195 TFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLL--DFKTSSSLALIQLTISAILMYIY 252
F F P+++ G Y T+ I+S + + + S+S+A I + I+A +M+I
Sbjct: 209 VFMNALADFGTPMLI-GEGYRTMPTMIYSEFVSEVGGNANFSASMASIMVFITA-MMFIA 266
Query: 253 AK 254
K
Sbjct: 267 QK 268
Score = 79.6 bits (193), Expect = 8e-14
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 272 KRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEW----FRRAFSEEYNP 327
KRLK+D L+ + +F++ PLF++ + F D + W F R FS +Y
Sbjct: 3 KRLKIDFWTYITLIIAVIFALFLVYPLFSLFISS--FKDPETGAWTLDNFLRFFSRKYY- 59
Query: 328 MFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVM 387
++N+ ++A+++ P+A ++ K +GK LE+ + + S + +
Sbjct: 60 ------YQALVNSFSVTICVTILAIVIGTPMAYFMSVYKIKGKTFLEILIIISMMSPAFI 113
Query: 388 LGLGYLL---------------AFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIK 432
++L ++YG ++ L YPF F +S ++ KI
Sbjct: 114 GAYSWILLLGRSGVVTKFFAGFGISTPTIYGFGGIL-LVFTLKLYPFIFMYVSGALSKID 172
Query: 433 KNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLT 492
+L+EA+ +LG S + + +PLI IL S+ F + A+ T ++ T T
Sbjct: 173 VSLMEAAESLGCSPFKKVVTIAMPLITPTILAGSLLVFMNALADFGTPMLIGEGYRTMPT 232
Query: 493 LAIYKFIS----SRQFGPASALSVVLMIISMV 520
+ +F+S + F AS S+++ I +M+
Sbjct: 233 MIYSEFVSEVGGNANFS-ASMASIMVFITAMM 263
>pir||A82310 sulfate ABC transporter, permease protein VC0539 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654967|gb|AAF93707.1| (AE004140) sulfate ABC
transporter, permease protein [Vibrio cholerae]
Length = 283
Score = 101 bits (248), Expect = 3e-20
Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 16/242 (6%)
Query: 24 LSLFYVPMVRVISLGFSLTSLLSVLSDEYYR-----RVIA---FTFVQALLSTLATLAVG 75
+SL +V ++ ++ + ++ EY++ RV+A T AL+++L G
Sbjct: 25 VSLLFVSLILLLPATGLIMQTSNMTFSEYWQVIADPRVVASYKVTVGSALIASLFNGLFG 84
Query: 76 IPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGILY 129
+ A+V Y FPGKR L +L+ +PF +P+ + + ++ +G +G G+ + Y
Sbjct: 85 LLLAWVLVRYTFPGKRILDALVDLPFALPTAVAGITLATLYSANGWIGSVLAELGIKVAY 144
Query: 130 NWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSIL 189
II+A F + P VVR + E I+ +EA M+LGA VF K+ LP L P++L
Sbjct: 145 TPLGIIVAMAFTSIPFVVRTVQPVLEEISREEEEAGMTLGASDAAVFWKVILPSLKPALL 204
Query: 190 VASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMML--LDFKTSSSLALIQLTISAI 247
V + L+FT F + + G E+ + L DF +S++A + L S +
Sbjct: 205 VGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDFPAASAIASVVLLTSLL 264
Query: 248 LM 249
L+
Sbjct: 265 LL 266
Score = 77.6 bits (188), Expect = 3e-13
Identities = 73/282 (25%), Positives = 122/282 (42%), Gaps = 34/282 (12%)
Query: 259 YSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFR 318
+SR +QRVL +++ V +FV + ++ P +I ++
Sbjct: 7 HSRPRQQRVLPGF--------ALSLGVSLLFVSLILLLPATGLI-----------MQTSN 47
Query: 319 RAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFAT 378
FSE + + + + T+ IA L + L LA V+ R F GK +L+
Sbjct: 48 MTFSEYWQVIADPRVVASYKVTVGSALIASLFNGLFGLLLAWVLVRYTFPGKRILDALVD 107
Query: 379 LPLASSSVMLGLGYLLAFRDTSLYGHWLL------------IALAHATVAYPFAFRTISI 426
LP A + + G+ + G L I +A A + PF RT+
Sbjct: 108 LPFALPTAVAGITLATLYSANGWIGSVLAELGIKVAYTPLGIIVAMAFTSIPFVVRTVQP 167
Query: 427 SIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS- 485
+ +I + EA +TLGAS+A F KV LP + +LV + SF S E +A
Sbjct: 168 VLEEISREEEEAGMTLGASDAAVFWKVILPSLKPALLVGTALSFTRSLGEFGAVIFIAGN 227
Query: 486 -PENTTLT-LAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
P + +T L I+ + F ASA++ V+++ S++ L+I
Sbjct: 228 MPYISEITSLMIFVRLQEFDFPAASAIASVVLLTSLLLLLMI 269
>sp|P16701|CYST_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|72517|pir||QRECST sulfate/thiosulfate transport
protein cysT - Escherichia coli
>gi|145659|gb|AAA23637.1| (M32101) cysT [Escherichia
coli] >gi|1788764|gb|AAC75477.1| (AE000330) sulfate,
thiosulfate transport system permease T protein
[Escherichia coli K12] >gi|1799843|dbj|BAA16298.1|
(D90871) SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST.
[Escherichia coli] >gi|1799853|dbj|BAA16307.1| (D90872)
SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST.
[Escherichia coli]
Length = 277
Score = 100 bits (247), Expect = 4e-20
Identities = 72/270 (26%), Positives = 131/270 (47%), Gaps = 18/270 (6%)
Query: 9 LSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYR-----RVIAFTFVQ 63
+S R+ L + L SL +V ++ ++ L + L + +Y+ +V+A V
Sbjct: 4 VSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAYKVT 63
Query: 64 ALLSTLATLAVGIPG---AYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG 120
L + +A++ G+ G A++ + Y FPG+ L +L+ +PF +P+ + L +F +G
Sbjct: 64 LLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNG 123
Query: 121 PLG------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFV 174
G + + Y W I +A F + P VVR + E + P Y+EAA +LGA +
Sbjct: 124 FYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQ 183
Query: 175 VFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG---YKYATIEVAIFSSAMMLLDF 231
F K+ LP L P+++ L+FT F + + G +K + IF + D+
Sbjct: 184 SFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIF-VRLQEFDY 242
Query: 232 KTSSSLALIQLTISAILMYIYAKLIERYSR 261
+S++A + L S +L++ L R+ R
Sbjct: 243 PAASAIASVILAASLLLLFSINTLQSRFGR 272
Score = 76.1 bits (184), Expect = 9e-13
Identities = 61/256 (23%), Positives = 111/256 (42%), Gaps = 26/256 (10%)
Query: 288 IFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIA 347
+FV + ++ PL A++ + + + + + NP + +T+L+ F+A
Sbjct: 22 LFVCLILLLPLSALVMQLAQMS-------WAQYWEVITNPQVVAAYKVTLLSA----FVA 70
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL 407
+ + L +A ++ R +F G+ LL+ LP A + + GL F YG WL
Sbjct: 71 SIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGFYGEWLA 130
Query: 408 ------------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVEL 455
IA+A A + PF RT+ + ++ EA+ TLGA+ SF KV L
Sbjct: 131 KFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFCKVVL 190
Query: 456 PLIVNGILVASIFSFAISAAELATTYMLASP---ENTTLTLAIYKFISSRQFGPASALSV 512
P + ++ SF S E +A + +L I+ + + ASA++
Sbjct: 191 PELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAIAS 250
Query: 513 VLMIISMVSFLLIERI 528
V++ S++ I +
Sbjct: 251 VILAASLLLLFSINTL 266
>gb|AAB95374.1| (U75349) putative permease BitF [Brachyspira hyodysenteriae]
Length = 257
Score = 99.8 bits (245), Expect = 7e-20
Identities = 72/254 (28%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Query: 281 IAILVY-FIFVLVFI-ISPLFAVIYKALMFNDRLSLEWFRRAFS-EEYNPMFGTSSLMT- 336
+++LV+ FI+ +VF+ I P VIY + + +R F + FS Y +F SSL T
Sbjct: 1 MSVLVHIFIYFIVFLSIIPQITVIYTSFLKTNRAI---FVKGFSLNSYISIF--SSLGTS 55
Query: 337 ILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAF 396
I NT +G I + I VI+ + +A + R K +++ P +LG+ LLAF
Sbjct: 56 IKNTYLYGIITIFIIVIMGMFIAYISIRRKNILTSVIDTITMFPYIIPGSVLGITLLLAF 115
Query: 397 RDTS--LYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVE 454
L G ++I ++ P+ R+ S + +I ++ EAS++LGAS+ +F K+
Sbjct: 116 NKPPIILSGTSMIIIMSLVIRRMPYTLRSSSAILYQISTSMEEASISLGASQVKTFFKIT 175
Query: 455 LPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVL 514
+++ G++ +I S+ EL+++ +L + ++ T+ ++IY+ + +G A+ALS +L
Sbjct: 176 AMMMLPGVISGAILSWITVINELSSSVILYTGKSRTMAVSIYQEVIRASYGTAAALSTIL 235
Query: 515 MIISMVSFLLIERI 528
+ +++S L+ ++
Sbjct: 236 TLSTIISLLIFFKL 249
>emb|CAA63862.1| (X94148) putative inner membrane protein [Bacillus licheniformis]
Length = 270
Score = 99.5 bits (244), Expect = 9e-20
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 288 IFVLVFIISPLFAVIYKALMFNDR-------LSLEWFRRAFSEE--YNPMFGTSSLMTIL 338
+ V +F+ P+F +I A ++ +SL WF S ++ + L+ ++
Sbjct: 23 LLVYLFLALPVFVIILSAFSPDEYPKFPPSGVSLRWFAGVISSSGWMESIWVSGMLLLVV 82
Query: 339 NTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD 398
L AVIL A +AR F GK ++ F P+ + LG+ +L
Sbjct: 83 TPL---------AVILGTVAAYALARLNFPGKQGIQAFILSPMMIPQIALGVSFLYLLTM 133
Query: 399 TSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLI 458
+ G + +A H ++ P+ RT+ +S+ + L AS+ LGA +F V LPLI
Sbjct: 134 LGVNGTFAGLAAGHILISLPYVLRTVGVSMANVDPKLELASMNLGAGPWYTFFHVTLPLI 193
Query: 459 VNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIIS 518
GI+ ++F+ S E++ + ++SP T + + + +I +A+SV+ + +S
Sbjct: 194 KPGIIAGAVFAAVTSFGEVSISLFVSSPAVTPVPVRTFSYIDQTCDPSVNAISVIFITVS 253
Query: 519 MVSFLLIER 527
+++ ++IER
Sbjct: 254 VIALIIIER 262
Score = 84.3 bits (205), Expect = 3e-15
Identities = 54/219 (24%), Positives = 104/219 (46%), Gaps = 7/219 (3%)
Query: 38 GFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLI 97
G SL V+S + I + + L+ T + +G AY + +FPGK+ +++ I
Sbjct: 53 GVSLRWFAGVISSSGWMESIWVSGMLLLVVTPLAVILGTVAAYALARLNFPGKQGIQAFI 112
Query: 98 TVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERI 157
P ++P + + + F+ + L LG+ + + H+ + P V+R + S +
Sbjct: 113 LSPMMIPQIALGVSFLYL------LTMLGVNGTFAGLAAGHILISLPYVLRTVGVSMANV 166
Query: 158 NPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATI 217
+P + A+M+LGA + F +TLPL+ P I+ ++ F SI L + +
Sbjct: 167 DPKLELASMNLGAGPWYTFFHVTLPLIKPGIIAGAVFAAVTSFGEVSISLFVSSPAVTPV 226
Query: 218 EVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLI 256
V FS D + +++++I +T+S I + I + I
Sbjct: 227 PVRTFSYIDQTCD-PSVNAISVIFITVSVIALIIIERTI 264
>sp|P27370|CYSW_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|280208|pir||F43670 integral membrane protein cysW -
Synechococcus sp >gi|154511|gb|AAA73047.1| (M65247)
integral membrane polypeptide of the sulfate permease
[Synechococcus PCC7942]
Length = 286
Score = 97.9 bits (240), Expect = 3e-19
Identities = 71/263 (26%), Positives = 125/263 (46%), Gaps = 17/263 (6%)
Query: 17 LIPMLLL-LSLFYVPMVRVI--------SLGFSLTSLLSVLSDEYYRRVIAFTFVQALLS 67
L+P+ L+ +SL YV ++ +I + L+ + L D + I T + ++S
Sbjct: 20 LLPLALIGISLLYVGLIIIIPAANVAVQAFSEGLSGFIKNLGDRNLQEAIRLTLLMGVIS 79
Query: 68 TLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL-- 125
G+ A+ + FPGK L S+I +PF + V+ L ++++G++G LG L
Sbjct: 80 VPLNTLFGLAAAFAIARKQFPGKSLLLSVIDLPFSISPVVAGLMIVLLYGRNGWLGPLLE 139
Query: 126 ----GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITL 181
I++ W + LA +F + P V R + + E I +EAA +LGA G+ F ++TL
Sbjct: 140 SNDIKIIFAWPGMALATIFVSMPFVAREVIPNLEEIGTDAEEAASTLGANGWQTFWRVTL 199
Query: 182 PLLLPSILVASLLTFTFCFMSF-SIPLILGGYKYATIEVAIF-SSAMMLLDFKTSSSLAL 239
P + S+L +LT F ++ ++ G T + +F A S + AL
Sbjct: 200 PSIKWSMLYGVVLTTARALGEFGAVSVVSGSITGKTQTLPLFVEEAYKQYQTTLSYTAAL 259
Query: 240 IQLTISAILMYIYAKLIERYSRE 262
+ IS + + + A L R R+
Sbjct: 260 LLGGISLVTLVLKALLEARTGRQ 282
>pir||D82302 iron(III) ABC transporter, permease protein VC0609 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655041|gb|AAF93775.1| (AE004146) iron(III) ABC
transporter, permease protein [Vibrio cholerae]
Length = 541
Score = 97.9 bits (240), Expect = 3e-19
Identities = 120/561 (21%), Positives = 229/561 (40%), Gaps = 84/561 (14%)
Query: 21 LLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLA--------TL 72
L+L +L +P++ + F SDE + ++A + +TL L
Sbjct: 13 LVLTTLLVLPILAIFYTAFGN-------SDEVFAHLLATVMPTYIFNTLVLTCSVLLLAL 65
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG-GLGILYNW 131
G+P A++ + PG+R+L+ + +P MP+ I+ F F +GP+ L W
Sbjct: 66 LFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGW 125
Query: 132 KA---------------IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVF 176
+A ++LA V Y P V + +++ N ++A L + F
Sbjct: 126 QAGSYWFPDIRSLGGASVVLALVLY--PYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSF 183
Query: 177 RKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSS 236
R+I+LPL P+I V L F + + T+ A++ + + + ++
Sbjct: 184 RRISLPLARPAIAVGLSLVAMETIGDFGTVSL---FAVNTLTTAVYDTWLGYSNLNAAAK 240
Query: 237 LALIQLTISAILMYIYAKLIERYSREEE---QRVLIAKKRLKLDIEGIAILVYFIF---- 289
++ I L + +L+ ERYSR + Q + + + ++G + I+
Sbjct: 241 ISAIMLVMVLLLLSS-----ERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGL 295
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVL 349
V V I PL +I A + F++ + F ++ + ++ +AVL
Sbjct: 296 VAVAFILPLLQLISYAWTY------------FAQSWTTQFKEYAINSFTVSISAAVVAVL 343
Query: 350 IAVILALPLARVIAR-EKFRGKGLLEVFATLPLASSSVMLGLGYLLA-------FRDTSL 401
+A++ A AR + R L +++ A +L +G L+ D +
Sbjct: 344 VALV-----ANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAK 398
Query: 402 YGHW---------LLIALAHATVAY--PFAFRTISISIRKIKKNLLEASLTLGASEALSF 450
W L A+ A V A +I S+ K+ +L A+ T+G
Sbjct: 399 MMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQML 458
Query: 451 LKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASAL 510
+V LPLI G L+A + F S EL +L TL +Y + S + A+
Sbjct: 459 KRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASDERLELAALP 518
Query: 511 SVVLMIISMVSFLLIERIGEE 531
+++L+++ ++ +++ R E+
Sbjct: 519 AILLVLVGLIPLVMVNRSLEQ 539
>pir||T46951 probable membrane component of 2-aminoethylphosphonate transporter
phnU [imported] - Salmonella typhimurium
>gi|1763083|gb|AAB39646.1| (U69493) PhnU [Salmonella
typhimurium]
Length = 286
Score = 94.8 bits (232), Expect = 2e-18
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 23/258 (8%)
Query: 16 ILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVI-AFTFVQALLSTL----- 69
+L+P+L+L +LF+ P+ ++ +L + E +R+V+ + FV ALL+TL
Sbjct: 20 LLLPLLVLATLFFWPLSLIVEQ--ALRGANGEIGLETFRQVVDSKRFVGALLNTLQIAFF 77
Query: 70 ---ATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG-- 124
L +G + + FPG + ++ +P+ ++ L F I+G +G L G
Sbjct: 78 ATAGCLLLGSVMSLILVFIPFPGSELIGRVVDTFIALPTFLITLAFTFIYGSAGLLNGTL 137
Query: 125 ----------LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFV 174
+ LY+ + +ILA + P+V+R + ++ +I+ EAA LGA
Sbjct: 138 MSLFAFELPPVDFLYSMQGVILAEITVFTPLVMRPLMAALRQIDKSQLEAASILGAHPLR 197
Query: 175 VFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTS 234
V ++ P LP+++ L F I L +G T+ + ++S A++ D+ +
Sbjct: 198 VIGQVIFPAALPALMAGGSLCLLLTTNEFGIVLFIGAKGVNTLPMMVYSKAILESDYTVA 257
Query: 235 SSLALIQLTISAILMYIY 252
+ALI + +S L +Y
Sbjct: 258 CMIALINIVLSLGLFSLY 275
>pir||H82994 probable permease of ABC iron transporter PA5216 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9951523|gb|AAG08601.1|AE004934_8 (AE004934) probable
permease of ABC iron transporter [Pseudomonas
aeruginosa]
Length = 539
Score = 94.8 bits (232), Expect = 2e-18
Identities = 126/544 (23%), Positives = 223/544 (40%), Gaps = 76/544 (13%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
L+L+P+ +LL L ++ + R I S L D R++ T L + +
Sbjct: 19 LVLLPLSVLL-LSWLEIDREI---------WSHLWDTQLPRLLGNTLTLVLGVGIGVTLL 68
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNW--- 131
G+ A++ S +FPG+R+L + +PF +P+ ++A F+ + +GP+ L L W
Sbjct: 69 GVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQSL--LREWFGS 126
Query: 132 ----------KAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITL 181
+IL V YP V + S++ EAA LG + F ++ L
Sbjct: 127 GLRLPRVRSTGGVILVLVLVFYPYVYLLARSAFIAQGKGLMEAARVLGLSPWQAFLRVAL 186
Query: 182 PLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLA-LI 240
P+ P+I L F + + + T AI+ + +++ LA L+
Sbjct: 187 PMARPAIGAGLALAVMETLADFGAVSV---FNFDTFTTAIYKTWYGFYSLSSAAQLASLL 243
Query: 241 QLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKL-DIEGIAILVYFIFV-LVFIISPL 298
L + +L L ER++R + + L + G L + LVF+ + +
Sbjct: 244 LLGVCLVL------LGERHTRGRAKAASERPRGAPLYRLRGARALAASAWCGLVFLCAFV 297
Query: 299 FAVIYKALMFNDRLSLEWFRRAFS--EEYNPMFGTSSLMTILNTLKFGFIAVLIAVILAL 356
V + F W + F E Y + G +TL G IA L V +AL
Sbjct: 298 IPVAQLVVWF-------WRQGRFDLDERYWDLIG--------HTLTLGGIAALATVAVAL 342
Query: 357 PLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL--------- 407
LA + R L A +L + +LAF + L HW++
Sbjct: 343 LLAFAVRLAPTRAIRGAVGLGNLGYALPGSVLAVSIMLAF--SWLDNHWVIPLSSALGGA 400
Query: 408 -----------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELP 456
+ LA+ A+ + + +I+ +L EAS +LG L FL+V LP
Sbjct: 401 GKPLLLGSLFALLLAYLIRFMAVAYGPLESGLARIRPSLPEASRSLGVGGPLLFLRVYLP 460
Query: 457 LIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMI 516
L++ L A++ F E+ T ++ TL + I++ S ++ AS ++ L++
Sbjct: 461 LLLPASLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVL 520
Query: 517 ISMV 520
+ ++
Sbjct: 521 VGLL 524
>pir||F82694 ABC transporter sulfate permease XF1345 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106342|gb|AAF84154.1|AE003966_15 (AE003966) ABC
transporter sulfate permease [Xylella fastidiosa]
Length = 286
Score = 94.0 bits (230), Expect = 4e-18
Identities = 65/256 (25%), Positives = 123/256 (47%), Gaps = 12/256 (4%)
Query: 7 INLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALL 66
+ LS+ + + +++L+ L V V+ LG+S L +V + ++ +F AL+
Sbjct: 20 LGLSLGITFVWLGLIVLIPLVGV-FVKASGLGWS--GLWNVWMEPRVLSALSVSFGSALV 76
Query: 67 STLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG--- 123
+ +G A+VF YDFPGKR ++I +PF +P+ + + ++G +G +G
Sbjct: 77 AAAFNAVMGTWVAWVFGRYDFPGKRVFDAIIDLPFALPTAVAGIALAALYGPNGWIGRWL 136
Query: 124 ---GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
G + Y I++A VF P VVR++ +EAA SLGA + ++
Sbjct: 137 ELAGFKVAYTPLGIVVALVFVGLPFVVRIVQPVLAEAEKELEEAAASLGANRWQTMFRVV 196
Query: 181 LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVA--IFSSAMMLLDFKTSSSLA 238
LP L P++L L F + + + G E+A + + + D+ ++++A
Sbjct: 197 LPTLWPAMLTGFALAFARGVGEYGSVIFIAGNLPNATEIAPLLITIRLEEFDYSGATAIA 256
Query: 239 LIQLTIS-AILMYIYA 253
+ L +S +L+ + A
Sbjct: 257 AVMLLLSFTVLLMVNA 272
>pir||C75613 probable molybdenum ABC transporter, permease protein - Deinococcus
radiodurans (strain R1)
>gi|6460495|gb|AAF12201.1|AE001862_27 (AE001862)
molybdenum ABC transporter, permease protein, putative
[Deinococcus radiodurans]
Length = 266
Score = 93.6 bits (229), Expect = 5e-18
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 15/256 (5%)
Query: 19 PMLLLL----SLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
P+ LLL +LF V V V+ S L+ + + + ++ L T+ +
Sbjct: 10 PLALLLGGALTLFLVVPVLVLLTRGLTASFWPALASRAVGDALRVSLLTTGITLLLTVTL 69
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGIL 128
P A++ + +DFPGK L +L+ +P V+P V+ +G ++ FG+ G LG G+ +
Sbjct: 70 VTPVAWLLARFDFPGKPVLETLLDLPIVLPPVVAGVGLLLTFGRGGLLGPALELAGIQLA 129
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
++ A++LA +F + P +R + ++ +N ++AA + GA VFR IT PL P +
Sbjct: 130 FSTAAVVLAQLFVSAPFYLRTARAGFQAVNRDAEDAARTDGASDGQVFRLITWPLAFPFL 189
Query: 189 LVASLLTFTFCFMSFSIPLILGGY---KYATIEVAIFSSAMMLLDFKTSSSLALIQLTIS 245
L +L + F ++ G + T+ +AI+ A + D + L+ + + ++
Sbjct: 190 LEGLVLAWARALGEFGATILFAGSLQGQTRTVTLAIY--AALESDLAPALVLSAVMVLVA 247
Query: 246 AILMYIYAKLIERYSR 261
L+ + + R R
Sbjct: 248 FGLLLLVRSVAGRRER 263
Score = 80.8 bits (196), Expect = 4e-14
Identities = 59/198 (29%), Positives = 94/198 (46%), Gaps = 16/198 (8%)
Query: 346 IAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHW 405
I +L+ V L P+A ++AR F GK +LE LP+ V+ G+G LL F L G
Sbjct: 61 ITLLLTVTLVTPVAWLLARFDFPGKPVLETLLDLPIVLPPVVAGVGLLLTFGRGGLLGPA 120
Query: 406 LLIA------------LAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKV 453
L +A LA V+ PF RT + + ++ +A+ T GAS+ F +
Sbjct: 121 LELAGIQLAFSTAAVVLAQLFVSAPFYLRTARAGFQAVNRDAEDAARTDGASDGQVFRLI 180
Query: 454 ELPLIVNGILVASIFSFAISAAELATTYMLASP---ENTTLTLAIYKFISSRQFGPASAL 510
PL +L + ++A + E T + A + T+TLAIY + S PA L
Sbjct: 181 TWPLAFPFLLEGLVLAWARALGEFGATILFAGSLQGQTRTVTLAIYAALES-DLAPALVL 239
Query: 511 SVVLMIISMVSFLLIERI 528
S V+++++ LL+ +
Sbjct: 240 SAVMVLVAFGLLLLVRSV 257
>pir||E82201 spermidine/putrescine ABC transporter, permease protein VC1427
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655925|gb|AAF94584.1| (AE004221)
spermidine/putrescine ABC transporter, permease protein
[Vibrio cholerae]
Length = 286
Score = 93.6 bits (229), Expect = 5e-18
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 14/250 (5%)
Query: 16 ILIPMLLLLSLFYVPM--VRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
+LIP L+++ ++ +I F+ + +L D Y +V+ +F A+++TL L
Sbjct: 24 VLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLL-DPLYGKVMLHSFYMAIVATLICLV 82
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG--------- 124
+G P AY+ + + F+ LI VPF S+I G I+ G G L
Sbjct: 83 IGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQALMSLGLID 142
Query: 125 --LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
L I++ A+++ V+ P ++ + S+ E+++ Y EAA LGA F ++ LP
Sbjct: 143 APLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQTLVRVILP 202
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
L +P I+ LL F I +LGG K I I S + D+ ++ ++
Sbjct: 203 LTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNARDWPFGAATSIALT 262
Query: 243 TISAILMYIY 252
AI++Y Y
Sbjct: 263 LAMAIMLYAY 272
>sp|P74547|CYSW_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|7442785|pir||S76742 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
>gi|1653743|dbj|BAA18654.1| (D90916) sulfate transport
system permease protein [Synechocystis sp.]
Length = 276
Score = 93.2 bits (228), Expect = 6e-18
Identities = 60/254 (23%), Positives = 124/254 (48%), Gaps = 11/254 (4%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGF--SLTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
LI + + L+ + +P + V F + + + D ++ + T V AL+S
Sbjct: 16 LIALALFYLILVLLLPAIAVFYEAFHKGVEPFIQAMGDRNFQSALQLTVVMALISVPLNT 75
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG------LG 126
G+ A+V + FPG+ S++ +PF + V+ L ++++GK+G +G +
Sbjct: 76 VFGLCAAWVLARNQFPGRALFLSVLDLPFSISPVVAGLMIVLLYGKNGWIGSWFASWDIQ 135
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I+++ + +A +F P V R + E + P +EAA +LGAK + +F ++TLP +
Sbjct: 136 IIFSVPGMAIATIFVTLPFVAREVIPVLEELGPEQEEAARTLGAKDWQIFWRVTLPNIRW 195
Query: 187 SILVASLLTFTFCFMSF-SIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSL-ALIQLTI 244
+L LLT F ++ ++ G T + IF +++T ++ A + L +
Sbjct: 196 GLLYGVLLTNARAMGEFGAVAVVSGSILGKTSTLPIFVE-QEYKNYQTEAAFGAAVVLAL 254
Query: 245 SAILMYIYAKLIER 258
A++ + +++E+
Sbjct: 255 LAVVTLVLKEILEQ 268
>pir||S77084 ABC-type transport protein sll0739 - Synechocystis sp. (strain PCC
6803) >gi|1006620|dbj|BAA10776.1| (D64005) ABC
transporter [Synechocystis sp.]
Length = 615
Score = 91.7 bits (224), Expect = 2e-17
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL 125
L+T+ T +GI AY PGK + ++ P ++P +V +++FGK+GPLG +
Sbjct: 17 LATVVTFILGIAAAYGMLGDRQPGKSLVEAVFIAPLILPPTVVGFLLLLLFGKNGPLGKI 76
Query: 126 ------GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKI 179
I++ W A ++ ++P++ + ++E+++ H + A +LGA VFR+I
Sbjct: 77 LAQFDVTIVFTWYAAVITATVVSFPLMYKTTLGAFEQVDRHLLQVAQTLGASRGEVFRRI 136
Query: 180 TLPLLLPSILVASLLTFTFCFMSFSIPLILGGY---KYATIEVAIF 222
LPL LP IL + L F F L++ G + TI +AI+
Sbjct: 137 LLPLSLPGILAGTTLAFARSLGEFGATLMVAGNIPGQTQTIPMAIY 182
Score = 76.5 bits (185), Expect = 7e-13
Identities = 51/199 (25%), Positives = 94/199 (46%), Gaps = 15/199 (7%)
Query: 340 TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLG---------- 389
+LK +A ++ IL + A + ++ GK L+E PL ++G
Sbjct: 11 SLKTAGLATVVTFILGIAAAYGMLGDRQPGKSLVEAVFIAPLILPPTVVGFLLLLLFGKN 70
Query: 390 --LGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEA 447
LG +LA D ++ W + V++P ++T + ++ ++LL+ + TLGAS
Sbjct: 71 GPLGKILAQFDVTIVFTWYAAVITATVVSFPLMYKTTLGAFEQVDRHLLQVAQTLGASRG 130
Query: 448 LSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFISSRQF 504
F ++ LPL + GIL + +FA S E T M+A + T+ +AIY + +
Sbjct: 131 EVFRRILLPLSLPGILAGTTLAFARSLGEFGATLMVAGNIPGQTQTIPMAIYFAVEAGAM 190
Query: 505 GPASALSVVLMIISMVSFL 523
G A ++++IS+ +
Sbjct: 191 GEAWLWVGIILVISLAGIM 209
>gi|11466750 ORF288 [Marchantia polymorpha] >gi|126795|sp|P26246|CYST_MARPO
PROBABLE SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|81344|pir||A05062 probable mbpY protein - liverwort
(Marchantia polymorpha) chloroplast
>gi|11721|emb|CAA28132.1| (X04465) ORF288 [Marchantia
polymorpha]
Length = 288
Score = 90.9 bits (222), Expect = 3e-17
Identities = 62/206 (30%), Positives = 103/206 (49%), Gaps = 10/206 (4%)
Query: 59 FTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGK 118
FTF+ ALL+T+ G+ A+V Y+FPGK+ L + + +PF +P+ + L + +F
Sbjct: 75 FTFLTALLATIINAIFGLILAWVLVRYEFPGKKLLDATVDLPFALPTSVGGLTLMTVFND 134
Query: 119 SGPLG------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKG 172
G + + I++N ++LA +F + P VVR I + + +EAA LGA
Sbjct: 135 KGWIKPICSWLNIKIVFNPIGVLLAMIFVSLPFVVRTIQPVLQNMEEDLEEAAWCLGASP 194
Query: 173 FVVFRKITLPLLLPSILVASLLTFTFCFMSF-SIPLILGG--YKYATIEVAIFSSAMMLL 229
+ F I P L PS+L + L F+ + SI LI K I V +F +
Sbjct: 195 WTTFWHILFPPLTPSLLTGTTLGFSRALGEYGSIVLIASNIPMKDLVISVLLFQK-LEQY 253
Query: 230 DFKTSSSLALIQLTISAILMYIYAKL 255
D+K+++ +A L IS ++ K+
Sbjct: 254 DYKSATIIASFVLIISFTALFFINKI 279
Score = 73.0 bits (176), Expect = 8e-12
Identities = 66/278 (23%), Positives = 124/278 (43%), Gaps = 39/278 (14%)
Query: 275 KLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSL 334
K ++ L Y F+L P+F ++YK + +N + T+
Sbjct: 25 KFELVLACALHYGTFILAL---PIFFLLYKTKQ---------------QPWNILLQTALE 66
Query: 335 MTILNTLKFGFIAVLIAVIL----ALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGL 390
+L+ F F+ L+A I+ L LA V+ R +F GK LL+ LP A + + GL
Sbjct: 67 PVVLSAYGFTFLTALLATIINAIFGLILAWVLVRYEFPGKKLLDATVDLPFALPTSVGGL 126
Query: 391 GYLLAFRDTSLYG---HWLLIA---------LAHATVAYPFAFRTISISIRKIKKNLLEA 438
+ F D WL I LA V+ PF RTI ++ ++++L EA
Sbjct: 127 TLMTVFNDKGWIKPICSWLNIKIVFNPIGVLLAMIFVSLPFVVRTIQPVLQNMEEDLEEA 186
Query: 439 SLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAI 495
+ LGAS +F + P + +L + F+ + E + ++AS ++ +++ +
Sbjct: 187 AWCLGASPWTTFWHILFPPLTPSLLTGTTLGFSRALGEYGSIVLIASNIPMKDLVISVLL 246
Query: 496 YKFISSRQFGPASALSVVLMIISMVSFLLIERIGEEVW 533
++ + + A+ ++ ++IIS + I +I ++W
Sbjct: 247 FQKLEQYDYKSATIIASFVLIISFTALFFINKI--QLW 282
>pir||T44855 molybdenum transport transmembrane protein modB [imported] -
Arthrobacter nicotinovorans plasmid pAO1
>gi|2288880|emb|CAA71777.1| (Y10817) transmembrane
protein [Arthrobacter nicotinovorans]
Length = 239
Score = 90.1 bits (220), Expect = 6e-17
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 45 LSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMP 104
+ +++ E + + + T+ + G+P A+V + FPG+R LR+ + +P V+P
Sbjct: 11 IPLITSESSLTALGLSLRTSAAGTVLCIVFGVPLAFVLARASFPGQRLLRAFVLLPLVLP 70
Query: 105 SVIVALGFIIIFGKSGPLG------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERIN 158
V+ + FG+ G LG G+ I ++ A++LA F P +V + +
Sbjct: 71 PVVGGNPLLYTFGRQGLLGRTLELAGMQIAFSTTAVVLAQTFVALPFLVVSLEGALRTAG 130
Query: 159 PHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYA--- 215
Y+ A +LGA V R++++PL+LP I S+L+F C F L G
Sbjct: 131 IKYEAVAATLGAHPTTVLRRVSIPLVLPGIASGSVLSFARCLGEFGATLTFAGSLQGVTR 190
Query: 216 TIEVAIFSSAMMLLDFKTSSSLALIQLTISAI 247
T+ + I+ D SL L+ + ++ +
Sbjct: 191 TLPLEIYLQRETDADAARRLSLLLVAVAVAVV 222
Score = 71.0 bits (171), Expect = 3e-11
Identities = 58/218 (26%), Positives = 95/218 (42%), Gaps = 14/218 (6%)
Query: 324 EYNPMFGTSSLMTILN-TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLA 382
++ P+ + S +T L +L+ ++ ++ +PLA V+AR F G+ LL F LPL
Sbjct: 9 QFIPLITSESSLTALGLSLRTSAAGTVLCIVFGVPLAFVLARASFPGQRLLRAFVLLPLV 68
Query: 383 SSSVMLGLGYLLAFRDTSLYGHWLLIA------------LAHATVAYPFAFRTISISIRK 430
V+ G L F L G L +A LA VA PF ++ ++R
Sbjct: 69 LPPVVGGNPLLYTFGRQGLLGRTLELAGMQIAFSTTAVVLAQTFVALPFLVVSLEGALRT 128
Query: 431 IKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLA-SPENT 489
+ TLGA +V +PL++ GI S+ SFA E T A S +
Sbjct: 129 AGIKYEAVAATLGAHPTTVLRRVSIPLVLPGIASGSVLSFARCLGEFGATLTFAGSLQGV 188
Query: 490 TLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
T TL + ++ A+ +L++ V+ + + R
Sbjct: 189 TRTLPLEIYLQRETDADAARRLSLLLVAVAVAVVGLSR 226
>emb|CAB53107.1| (AJ245645) sulfate transport permease protein [Prototheca
wickerhamii]
Length = 255
Score = 90.1 bits (220), Expect = 6e-17
Identities = 60/250 (24%), Positives = 120/250 (48%), Gaps = 15/250 (6%)
Query: 26 LFYVPMVRVISLGFSLT------SLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGA 79
LF++P++ + +L FSL +L D FT AL++ L G
Sbjct: 6 LFFIPVLPLFAL-FSLILKNSWKDILEKAVDPIAICAYGFTIKMALIAALFNSIFGFLIT 64
Query: 80 YVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG------PLGGLGILYNWKA 133
+V + Y+F GK+F+ + + +PF +P+ + L ++G G +G L I+Y
Sbjct: 65 WVITRYEFKGKKFIDAAVDLPFALPTSVAGLTLATVYGNQGWVGRFLKMGNLQIIYTKFG 124
Query: 134 IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASL 193
++LA +F ++P V+R + + ++ +EAA LGA F F ++ P L+P+++
Sbjct: 125 VLLAMIFVSFPFVIRSLQPVLQGLDHGLEEAAWCLGASSFQTFLRVIFPTLVPALVTGFT 184
Query: 194 LTFTFCFMSF-SIPLILGGYKYATIEVAI-FSSAMMLLDFKTSSSLALIQLTISAILMYI 251
L+F+ F S+ +I + ++ ++ D+ +S + + L I+ +++++
Sbjct: 185 LSFSRALGEFGSVVMISSNLPLDDLVTSVLIYQSLEQYDYFGASVIGAVILMIALLIIFL 244
Query: 252 YAKLIERYSR 261
YSR
Sbjct: 245 INTAQAFYSR 254
Score = 73.7 bits (178), Expect = 5e-12
Identities = 50/201 (24%), Positives = 94/201 (45%), Gaps = 15/201 (7%)
Query: 340 TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDT 399
T+K IA L I + VI R +F+GK ++ LP A + + GL + +
Sbjct: 45 TIKMALIAALFNSIFGFLITWVITRYEFKGKKFIDAAVDLPFALPTSVAGLTLATVYGNQ 104
Query: 400 SLYGHWLL------------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEA 447
G +L + LA V++PF R++ ++ + L EA+ LGAS
Sbjct: 105 GWVGRFLKMGNLQIIYTKFGVLLAMIFVSFPFVIRSLQPVLQGLDHGLEEAAWCLGASSF 164
Query: 448 LSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASP---ENTTLTLAIYKFISSRQF 504
+FL+V P +V ++ SF+ + E + M++S ++ ++ IY+ + +
Sbjct: 165 QTFLRVIFPTLVPALVTGFTLSFSRALGEFGSVVMISSNLPLDDLVTSVLIYQSLEQYDY 224
Query: 505 GPASALSVVLMIISMVSFLLI 525
AS + V+++I+++ LI
Sbjct: 225 FGASVIGAVILMIALLIIFLI 245
>sp|P09834|MODB_ECOLI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|504499|gb|AAB00836.1| (L34009) hydrophobic
membrane-bound protein [Escherichia coli]
>gi|973215|gb|AAB60172.1| (U27192) ModB [Escherichia
coli] >gi|1147818|gb|AAB06894.1| (U07867) part of a
molybdenum periplasmic binding protein dependent
transport system [Escherichia coli]
>gi|1586649|prf||2204295C modB gene [Escherichia coli]
Length = 229
Score = 89.7 bits (219), Expect = 7e-17
Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 12/230 (5%)
Query: 47 VLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSV 106
+L+D ++ V+ V +L + L +L GI A++ FPGK L S++ +P V+P V
Sbjct: 2 ILTDPEWQAVLLSLKVSSL-AVLFSLPFGIFFAWLLVRCSFPGKALLDSVLHLPLVLPPV 60
Query: 107 IVALGFIIIFGKSGPLG-------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINP 159
+V ++ G+ G +G G+ ++W+ +LA ++P++VR I + E ++
Sbjct: 61 VVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDV 120
Query: 160 HYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY---KYAT 216
++AA +LGA + VF ITLPL LP I+V ++L F F + + T
Sbjct: 121 KLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT 180
Query: 217 IEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQR 266
I A+++ ++ L +I + ++ I + I ++ + R SRE R
Sbjct: 181 IPSAMYTLIQTPGGESGAARLCIISIALAMISLLI-SEWLARISRERAGR 229
Score = 75.7 bits (183), Expect = 1e-12
Identities = 57/207 (27%), Positives = 96/207 (45%), Gaps = 17/207 (8%)
Query: 337 ILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAF 396
+L +LK +AVL ++ + A ++ R F GK LL+ LPL V++G L++
Sbjct: 11 VLLSLKVSSLAVLFSLPFGIFFAWLLVRCSFPGKALLDSVLHLPLVLPPVVVGYLLLVSM 70
Query: 397 RDTSLYGH-------------WLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLG 443
G W LA A +++P R I +++ + L +A+ TLG
Sbjct: 71 GRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLG 130
Query: 444 ASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFIS 500
A F + LPL + GI+V ++ +FA S E T S E T+ A+Y I
Sbjct: 131 AGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQ 190
Query: 501 S-RQFGPASALSVVLMIISMVSFLLIE 526
+ A+ L ++ + ++M+S L+ E
Sbjct: 191 TPGGESGAARLCIISIALAMISLLISE 217
>pir||BVECHJ molybdenum transport protein modB - Escherichia coli
>gi|1651349|dbj|BAA35428.1| (D90715) Molybdenum
transport system permease protein ModB. [Escherichia
coli] >gi|1786980|gb|AAC73851.1| (AE000179) molybdate
transport permease protein [Escherichia coli K12]
Length = 229
Score = 89.3 bits (218), Expect = 1e-16
Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 12/230 (5%)
Query: 47 VLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSV 106
+L+D ++ V+ V +L + L +L GI A++ FPGK L S++ +P V+P V
Sbjct: 2 ILTDPEWQAVLLSLKVSSL-AVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPV 60
Query: 107 IVALGFIIIFGKSGPLG-------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINP 159
+V ++ G+ G +G G+ ++W+ +LA ++P++VR I + E ++
Sbjct: 61 VVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDV 120
Query: 160 HYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY---KYAT 216
++AA +LGA + VF ITLPL LP I+V ++L F F + + T
Sbjct: 121 KLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT 180
Query: 217 IEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQR 266
I A+++ ++ L +I + ++ I + I ++ + R SRE R
Sbjct: 181 IPSAMYTLIQTPGGESGAARLCIISIALAMISLLI-SEWLARISRERAGR 229
Score = 75.3 bits (182), Expect = 2e-12
Identities = 57/207 (27%), Positives = 96/207 (45%), Gaps = 17/207 (8%)
Query: 337 ILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAF 396
+L +LK +AVL ++ + A ++ R F GK LL+ LPL V++G L++
Sbjct: 11 VLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSM 70
Query: 397 RDTSLYGH-------------WLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLG 443
G W LA A +++P R I +++ + L +A+ TLG
Sbjct: 71 GRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLG 130
Query: 444 ASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFIS 500
A F + LPL + GI+V ++ +FA S E T S E T+ A+Y I
Sbjct: 131 AGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQ 190
Query: 501 S-RQFGPASALSVVLMIISMVSFLLIE 526
+ A+ L ++ + ++M+S L+ E
Sbjct: 191 TPGGESGAARLCIISIALAMISLLISE 217
>gb|AAB67296.1| (U59485) AttB [Agrobacterium tumefaciens]
Length = 285
Score = 89.3 bits (218), Expect = 1e-16
Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 19/245 (7%)
Query: 286 YFIFVL-VFIISPLFAVIYKALMFNDR---------LSLEWFRRAFSEEYNPMFGTSSLM 335
+F+F++ VF+I P F V+ +L ND L+L+W+R FS+ P + +++L
Sbjct: 36 FFVFLITVFLILPTFLVVPMSL--NDGSYLAFPPQGLTLKWYRAYFSD---PDWMSATLF 90
Query: 336 TILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLA 395
+ L+ F ++A + A +A+ + KGLL+ A P+ V+LG+ L
Sbjct: 91 S----LQVAFATAIVATTIGTTAALALAKSRLPFKGLLQSLALGPMIVPHVVLGVSLYLV 146
Query: 396 FRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVEL 455
F + G + LAH +A P+ + +++K +L A+L GA+ SF V L
Sbjct: 147 FSPWRVTGTFAGFVLAHTVLAIPYVMIVVGAAVQKFDPSLELAALNCGANRFQSFFLVML 206
Query: 456 PLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLM 515
P I + AS+F+F S + ++ ++ ++ +++ I +A S VL+
Sbjct: 207 PNIGPSVAAASVFAFLASFDDATVSFFISDIGGKSIGRKMFEDIDFNLTPVIAAASTVLV 266
Query: 516 IISMV 520
IS+V
Sbjct: 267 AISLV 271
>gi|11466435 probable transport protein [Mesostigma viride]
>gi|7259578|gb|AAF43879.1|AF166114_91 (AF166114)
probable transport protein [Mesostigma viride]
Length = 269
Score = 88.9 bits (217), Expect = 1e-16
Identities = 68/268 (25%), Positives = 126/268 (46%), Gaps = 22/268 (8%)
Query: 6 RINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQAL 65
RI L ++++P+L LLS R FS + S+ + + T AL
Sbjct: 12 RITLGYLLFMLILPILALLS-------RASQELFS--NFWSIAMEPAAIYAYSITLSMAL 62
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG-- 123
++++ GI A++ Y+FPGKR + + I +PF +P+ + L ++ + G +G
Sbjct: 63 IASIVNGIFGIFIAWILVRYNFPGKRIVDAAIDLPFALPTSVAGLTLATVYSEKGWIGHF 122
Query: 124 ----GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKI 179
+ +++ + +A +F ++P VVR + + I +EAA SLGA + F K+
Sbjct: 123 LQSLSIKVVFTKLGVGVAMIFVSFPFVVRTLQPVLQDIEKELEEAAWSLGASSWTTFWKV 182
Query: 180 TLPLLLPSILVASLLTFTFCFMSFSIPLILGG---YKYATIEVAIFSSAMMLLDFKTSSS 236
P L+PS+L L F+ + +I+ +K T V IF + D+ ++
Sbjct: 183 IFPSLIPSLLTGIALAFSRAVGEYGSVVIIASNIPFKDLTAPVLIFQK-LEQYDYTGATV 241
Query: 237 LALIQLTISAILMY---IYAKLIERYSR 261
+ + L+IS ++ I L + YS+
Sbjct: 242 IGTVILSISLFILVGINIIQSLNQMYSK 269
Score = 78.4 bits (190), Expect = 2e-13
Identities = 60/243 (24%), Positives = 113/243 (45%), Gaps = 21/243 (8%)
Query: 298 LFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALP 357
LF +I L R S E F +S P +++ TL IA ++ I +
Sbjct: 19 LFMLILPILALLSRASQELFSNFWSIAMEP----AAIYAYSITLSMALIASIVNGIFGIF 74
Query: 358 LARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL---------- 407
+A ++ R F GK +++ LP A + + GL + + GH+L
Sbjct: 75 IAWILVRYNFPGKRIVDAAIDLPFALPTSVAGLTLATVYSEKGWIGHFLQSLSIKVVFTK 134
Query: 408 --IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVA 465
+ +A V++PF RT+ ++ I+K L EA+ +LGAS +F KV P ++ +L
Sbjct: 135 LGVGVAMIFVSFPFVVRTLQPVLQDIEKELEEAAWSLGASSWTTFWKVIFPSLIPSLLTG 194
Query: 466 SIFSFAISAAELATTYMLASP---ENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSF 522
+F+ + E + ++AS ++ T + I++ + + A+ + V++ IS+ F
Sbjct: 195 IALAFSRAVGEYGSVVIIASNIPFKDLTAPVLIFQKLEQYDYTGATVIGTVILSISL--F 252
Query: 523 LLI 525
+L+
Sbjct: 253 ILV 255
>pir||B70683 probable cysT - Mycobacterium tuberculosis (strain H37RV)
>gi|1655661|emb|CAB03727.1| (Z81368) cysT [Mycobacterium
tuberculosis]
Length = 283
Score = 88.5 bits (216), Expect = 2e-16
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 68 TLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGI 127
T+ L G+ A+V DF GKR + ++I +PF +P+++ +L + ++G + P+G L
Sbjct: 83 TVINLVFGLLIAWVLVRDDFAGKRIVDAIIDLPFALPTIVASLVMLALYGNNSPVG-LHF 141
Query: 128 LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPS 187
+ + +A F P VVR + I+ +EAA SLGA G +F + LP L P+
Sbjct: 142 QHTATGVGVALAFVTLPFVVRAVQPVLLEIDRETEEAAASLGANGAKIFTSVVLPSLTPA 201
Query: 188 ILVASLLTFTFCFMSFSIPLILGGYKYATIEVAI-FSSAMMLLDFKT-SSSLALIQLTIS 245
+L + L F+ F +++GG EV+ + ++ D +T +++++++ L+IS
Sbjct: 202 LLSGAGLAFSRAIGEFGSVVLIGGAVPGKTEVSSQWIRTLIENDDRTGAAAISVVLLSIS 261
Query: 246 AILMYIYAKLIERYSREEE 264
I++ I + R ++ EE
Sbjct: 262 FIVLLILRVVGARAAKREE 280
>pir||G81875 sulfate ABC transporter, inner membrane protein NMA1098
[similarity] - Neisseria meningitidis (group A strain
Z2491) >gi|7379793|emb|CAB84361.1| (AL162755) putative
sulphate permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 286
Score = 88.5 bits (216), Expect = 2e-16
Identities = 70/251 (27%), Positives = 117/251 (45%), Gaps = 14/251 (5%)
Query: 11 MRKGLILIPMLLLLSLFYVPMVRVI--SLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
+R LI + LL + VP+V V +L L L+D I T + AL+
Sbjct: 16 LRVLLIAAALGFLLLMLVVPLVAVFYEALKGGWDLYLKSLNDPEAWSAIKLTLITALIVV 75
Query: 69 LATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG----- 123
+G+ A++ + +DF GK+ L +L+ +PF + V+ L F+++FG LG
Sbjct: 76 PVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEA 135
Query: 124 -GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
G+ I++ IILA +F +P V R I + ++AA+ LGA G+ +F ++TLP
Sbjct: 136 QGIQIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALILGASGWQMFWRVTLP 195
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGY-----KYATIEVAIFSSAMMLLD-FKTSSS 236
+ ++L +LT F ++ G+ + V IF + F S
Sbjct: 196 NIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGV 255
Query: 237 LALIQLTISAI 247
LAL+ L A+
Sbjct: 256 LALLALATLAV 266
Score = 75.3 bits (182), Expect = 2e-12
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 26/248 (10%)
Query: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAV 348
F+L+ ++ PL AV Y+AL L L+ +P ++ +T++ L I V
Sbjct: 27 FLLLMLVVPLVAVFYEALKGGWDLYLKSLN-------DPEAWSAIKLTLITAL----IVV 75
Query: 349 LIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL- 407
+ +L + +A ++ R FRGK LL LP + S V+ GL ++L F + G WL
Sbjct: 76 PVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEA 135
Query: 408 -----------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELP 456
I LA V +PF R I ++ + +A+L LGAS F +V LP
Sbjct: 136 QGIQIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALILGASGWQMFWRVTLP 195
Query: 457 LIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFISSRQFGPASALSVV 513
I +L I + A + E +++ E T+ L + F + F A ALS V
Sbjct: 196 NIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGV 255
Query: 514 LMIISMVS 521
L ++++ +
Sbjct: 256 LALLALAT 263
>gb|AAB67295.1| (U59485) AttA2 [Agrobacterium tumefaciens]
Length = 300
Score = 88.2 bits (215), Expect = 2e-16
Identities = 63/253 (24%), Positives = 116/253 (44%), Gaps = 17/253 (6%)
Query: 15 LILIPM-LLLLSLFYVPMVRVISLGF---SLTSLLSVLSDEYYRRVIAFTFVQALLSTLA 70
L+L+P L+LL+ F P+ R+++L SL + + D Y V+ T V AL
Sbjct: 34 LLLLPAALMLLTGFVYPLARLVALSMPDMSLELYIRIFRDPLYLNVLFSTTVVALAVMCC 93
Query: 71 TLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG------ 124
L +G P A P L + +P ++ + +I++ ++G +
Sbjct: 94 CLLLGFPVANAMVRLKHPWTLILTGCVLIPLWTSVLVRSYAWIVLLQRTGIINQALLSTK 153
Query: 125 -----LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKI 179
L ++Y A+I+A P ++ I ++ I P Y +AAM+LG+ FR I
Sbjct: 154 LIDEPLRMIYTQGAVIVAMTHVLLPFMIMPIFAALRAIPPEYVQAAMNLGSTRLHAFRAI 213
Query: 180 TLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLD--FKTSSSL 237
+PL LP I +++F + P ++GG + I +LLD F + S
Sbjct: 214 IVPLSLPGIFAGCVISFVLALGFYVTPALVGGAGSLMVATLIGQQTTVLLDWPFAAALST 273
Query: 238 ALIQLTISAILMY 250
+L+ +T++ ++++
Sbjct: 274 SLLVVTLAVVIIF 286
>gi|11497713 sulfate ABC transporter, permease protein (cysT) [Archaeoglobus
fulgidus] >gi|7442799|pir||E69261 sulfate ABC
transporter, permease protein (cysT) homolog -
Archaeoglobus fulgidus >gi|2650555|gb|AAB91136.1|
(AE001100) sulfate ABC transporter, permease protein
(cysT) [Archaeoglobus fulgidus]
Length = 261
Score = 88.2 bits (215), Expect = 2e-16
Identities = 50/202 (24%), Positives = 101/202 (49%), Gaps = 5/202 (2%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLG-FSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
L L+ ++LL + +P+ ++L F+ L SD +V+ T+ AL+STL +
Sbjct: 9 LALLSSIILLFVL-LPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVI 67
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKA 133
G P AY+ + FPGK + ++ +P V+P + + +++FG SG +G L A
Sbjct: 68 FGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDA 127
Query: 134 ---IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILV 190
I++A +F + P+ + + ++ + A +LG+ VF ++LPL + I+
Sbjct: 128 LPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVA 187
Query: 191 ASLLTFTFCFMSFSIPLILGGY 212
+++++ F +++ Y
Sbjct: 188 GAIMSWARGISEFGAVVVIAYY 209
Score = 76.9 bits (186), Expect = 5e-13
Identities = 64/248 (25%), Positives = 110/248 (43%), Gaps = 22/248 (8%)
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVL 349
+L+F++ P+ A + L D F +A S+ + +L T I+ L
Sbjct: 16 ILLFVLLPVAATVTLQLFNFDE-----FLKAASDP-------AVWKVVLTTYYAALISTL 63
Query: 350 IAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIA 409
IAVI PLA ++AR+ F GK ++E LP+ + G+ L+ F + L G + +
Sbjct: 64 IAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLK 123
Query: 410 LAHAT--VAYPFAFRTISISIRKIKKNLLEASL-------TLGASEALSFLKVELPLIVN 460
A + F ++ I I + K+ + TLG+S F V LPL V
Sbjct: 124 FVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVR 183
Query: 461 GILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMV 520
I+ +I S+A +E ++A TL IY+ S A ++ +L+++S+
Sbjct: 184 HIVAGAIMSWARGISEFGAVVVIAYYPMIAPTL-IYERYLSEGLSAAMPVAAILILLSLA 242
Query: 521 SFLLIERI 528
F+ + I
Sbjct: 243 VFVALRII 250
>pir||C81147 sulfate ABC transporter, permease protein NMB0880 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226118|gb|AAF41291.1| (AE002440) sulfate ABC
transporter, permease protein [Neisseria meningitidis
MC58]
Length = 286
Score = 88.2 bits (215), Expect = 2e-16
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 14/251 (5%)
Query: 11 MRKGLILIPMLLLLSLFYVPMVRVI--SLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
+R LI + LL + VP+V V +L L L+D I T + AL+
Sbjct: 16 LRVLLIAAALGFLLLMLVVPLVAVFYEALKGGWDLYLKSLNDPEAWSAIKLTLITALIVV 75
Query: 69 LATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG----- 123
+G+ A++ + +DF GK+ L +L+ +PF + V+ L F+++FG LG
Sbjct: 76 PVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEA 135
Query: 124 -GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
G+ I++ I+LA +F +P V R I + ++AA+ LGA G+ +F ++TLP
Sbjct: 136 QGIQIIFAIPGIVLATLFVTFPFVAREIIPLMQAQGDSEEQAALILGASGWQMFWRVTLP 195
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGY-----KYATIEVAIFSSAMMLLD-FKTSSS 236
+ ++L +LT F ++ G+ + V IF + F S
Sbjct: 196 NIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGV 255
Query: 237 LALIQLTISAI 247
LAL+ L A+
Sbjct: 256 LALLALATLAV 266
Score = 75.7 bits (183), Expect = 1e-12
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 26/248 (10%)
Query: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAV 348
F+L+ ++ PL AV Y+AL L L+ +P ++ +T++ L I V
Sbjct: 27 FLLLMLVVPLVAVFYEALKGGWDLYLKSLN-------DPEAWSAIKLTLITAL----IVV 75
Query: 349 LIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL- 407
+ +L + +A ++ R FRGK LL LP + S V+ GL ++L F + G WL
Sbjct: 76 PVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEA 135
Query: 408 -----------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELP 456
I LA V +PF R I ++ + +A+L LGAS F +V LP
Sbjct: 136 QGIQIIFAIPGIVLATLFVTFPFVAREIIPLMQAQGDSEEQAALILGASGWQMFWRVTLP 195
Query: 457 LIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFISSRQFGPASALSVV 513
I +L I + A + E +++ E T+ L + F + F A ALS V
Sbjct: 196 NIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGV 255
Query: 514 LMIISMVS 521
L ++++ +
Sbjct: 256 LALLALAT 263
>pir||T46952 probable membrane component of 2-aminoethylphosphonate transporter
phnV [imported] - Salmonella typhimurium
>gi|1763084|gb|AAB39647.1| (U69493) PhnV [Salmonella
typhimurium]
Length = 265
Score = 87.8 bits (214), Expect = 3e-16
Identities = 68/253 (26%), Positives = 121/253 (46%), Gaps = 8/253 (3%)
Query: 284 LVYFIFVLVFIISPLFAVIYKAL--MFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTL 341
+V + +VF PL ++ +L +N L + F N + G ++ +L +L
Sbjct: 14 VVASVLFIVFFFLPLAVILMSSLSQQWNGILPSGFTLNHF---VNALHG-AAWDALLASL 69
Query: 342 KFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSL 401
GF A L A++ + A + + + + L + LP A SV +GLG L+AF L
Sbjct: 70 TIGFCASLFALLCGVWAALALRQYGVKTQKWLSMVFYLPSAIPSVSVGLGILVAFSQGPL 129
Query: 402 Y--GHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIV 459
G ++ AH + F F +S + +I ++ + +LGAS V LPL++
Sbjct: 130 QMNGTLWIVLTAHFVLISAFTFSNVSTGLARISADIENVASSLGASPWYRLRHVTLPLLM 189
Query: 460 NGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISM 519
++ A S ++S EL T M+ P TTL +AI+ +AL++VL+ I++
Sbjct: 190 PWMMSALALSLSLSMGELGATMMIYPPGWTTLPVAIFSLTDRGNIADGAALTIVLVAITL 249
Query: 520 VSFLLIERIGEEV 532
+ + +ERI + +
Sbjct: 250 LLMMKLERIAKRL 262
Score = 70.2 bits (169), Expect = 5e-11
Identities = 61/262 (23%), Positives = 118/262 (44%), Gaps = 22/262 (8%)
Query: 17 LIPMLLLLSLFYVPMV------------RVISLGFSLTSLLSVLSDEYYRRVIAFTFVQA 64
++ +L + F++P+ ++ GF+L ++ L + ++A +
Sbjct: 14 VVASVLFIVFFFLPLAVILMSSLSQQWNGILPSGFTLNHFVNALHGAAWDALLASLTI-G 72
Query: 65 LLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG 124
++L L G+ A Y +++L + +P +PSV V LG ++ F + GPL
Sbjct: 73 FCASLFALLCGVWAALALRQYGVKTQKWLSMVFYLPSAIPSVSVGLGILVAFSQ-GPLQM 131
Query: 125 LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLL 184
G L+ ++ AH +++ RI+ + A SLGA + R +TLPLL
Sbjct: 132 NGTLW---IVLTAHFVLISAFTFSNVSTGLARISADIENVASSLGASPWYRLRHVTLPLL 188
Query: 185 LPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTI 244
+P ++ A L+ + +++ + T+ VAIFS L D + A + + +
Sbjct: 189 MPWMMSALALSLSLSMGELGATMMIYPPGWTTLPVAIFS----LTDRGNIADGAALTIVL 244
Query: 245 SAILMYIYAKLIERYSREEEQR 266
AI + + KL ER ++ Q+
Sbjct: 245 VAITLLLMMKL-ERIAKRLGQK 265
>sp|P31136|POTI_ECOLI PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTI
>gi|321864|pir||D45313 putrescine transport system
permease protein potI - Escherichia coli
>gi|147337|gb|AAA24412.1| (M93239) transmembrane protein
[Escherichia coli] >gi|1651390|dbj|BAA35568.1| (D90723)
Putrescine transport protein PotI. [Escherichia coli]
>gi|1787081|gb|AAC73944.1| (AE000187) putrescine
transport protein; permease [Escherichia coli K12]
Length = 281
Score = 87.0 bits (212), Expect = 5e-16
Identities = 73/264 (27%), Positives = 119/264 (44%), Gaps = 17/264 (6%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFSLTSLLSV------------LSDEYYRRVIAFTFVQA 64
++ +LL + Y PM+ ++ F+ + L++V L D+ + + A
Sbjct: 13 IVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDAMMSAVGLSLTIA 72
Query: 65 LLSTLATLAVGIPGAYVFSHYD-FPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG 123
+ A +G A V + F G +IT P VMP VI L +++F
Sbjct: 73 ACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAI 132
Query: 124 GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPL 183
G I LAHV + V VI+S ++ +EAAM LGA VF ITLP+
Sbjct: 133 GWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPM 192
Query: 184 LLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLT 243
++P+I+ LL FT I + G T+ + +FSS M ++ ++LA + L
Sbjct: 193 IMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVN-PEINALATLILG 251
Query: 244 ISAILMYIYAKLIERYSREEEQRV 267
I+ +I L+ +R E+QR+
Sbjct: 252 AVGIVGFIAWYLM---ARAEKQRI 272
Score = 71.0 bits (171), Expect = 3e-11
Identities = 63/257 (24%), Positives = 114/257 (43%), Gaps = 16/257 (6%)
Query: 284 LVYFIFVLVFIISP-LFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILN-TL 341
+V + F+ +P L VIY FN + + + Y + ++M+ + +L
Sbjct: 13 IVILLLGFTFLYAPMLMLVIYS---FNSSKLVTVWAGWSTRWYGELLRDDAMMSAVGLSL 69
Query: 342 KFGFIAVLIAVILALPLARVIAR-EKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTS 400
A A IL A V+ R +FRG T PL V+ GL LL F +
Sbjct: 70 TIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALA 129
Query: 401 LYGHW------LLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVE 454
W L I LAH T + IS +R++ +++ EA++ LGA+ F +
Sbjct: 130 HAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVIT 189
Query: 455 LPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVL 514
LP+I+ I+ + +F +S +L ++ P TTL + ++ + +AL+ ++
Sbjct: 190 LPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLI 249
Query: 515 M----IISMVSFLLIER 527
+ I+ +++ L+ R
Sbjct: 250 LGAVGIVGFIAWYLMAR 266
>pir||C72261 spermidine/putrescine ABC transporter, permease protein -
Thermotoga maritima (strain MSB8)
>gi|4981939|gb|AAD36448.1|AE001791_10 (AE001791)
spermidine/putrescine ABC transporter, permease protein
[Thermotoga maritima]
Length = 256
Score = 87.0 bits (212), Expect = 5e-16
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 280 GIAILVYFIFVLVFIISPLFAVIYKALMFNDRLS-------LEWFRRAFSEEYNPMFGTS 332
G I I +VF PLF V+ + FN S L+W+ F+ EY+
Sbjct: 4 GRFIKTIVILTMVFFYLPLFIVVL--MSFNSAKSPVWSGFTLKWYLELFTREYS------ 55
Query: 333 SLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLE----VFATLPLASSSVML 388
+ + + I +++ ++ + + A E F K LE LP V++
Sbjct: 56 ----VWHAFRNSLIVAIVSSTVSTAIGTLTAIELFWKKSRLENSIWFLTYLPFVVPDVII 111
Query: 389 GLGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEAL 448
G+ LL F + I LAH T + P+ + ++ K+++EA+ LG+++
Sbjct: 112 GISLLLLFSMFKVQLGLFTITLAHITFSIPYTMMIVHSRLQDFDKSIIEAAYDLGSTDFQ 171
Query: 449 SFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPAS 508
F +V +P +V GI+ A + +F +S + T+ +A P +TTL + IY I +FG +
Sbjct: 172 VFYRVIIPNLVPGIVAAFLLAFTLSIDDFVITFFVAGPGSTTLPIQIYSMI---RFGISP 228
Query: 509 ALSVV 513
++ +
Sbjct: 229 TVNAI 233
Score = 74.9 bits (181), Expect = 2e-12
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 20 MLLLLSLFYVPMVRVISL-----------GFSLTSLLSVLSDEY-YRRVIAFTFVQALLS 67
++L + FY+P+ V+ + GF+L L + + EY + + A++S
Sbjct: 11 VILTMVFFYLPLFIVVLMSFNSAKSPVWSGFTLKWYLELFTREYSVWHAFRNSLIVAIVS 70
Query: 68 TLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGI 127
+ + A+G A + + L +PFV+P VI+ + +++F GL
Sbjct: 71 STVSTAIGTLTAIELFWKKSRLENSIWFLTYLPFVVPDVIIGISLLLLFSMFKVQLGLF- 129
Query: 128 LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPS 187
I LAH+ ++ P + ++ S + + EAA LG+ F VF ++ +P L+P
Sbjct: 130 -----TITLAHITFSIPYTMMIVHSRLQDFDKSIIEAAYDLGSTDFQVFYRVIIPNLVPG 184
Query: 188 ILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFS 223
I+ A LL FT F I + G T+ + I+S
Sbjct: 185 IVAAFLLAFTLSIDDFVITFFVAGPGSTTLPIQIYS 220
>dbj|BAB06847.1| (AP001517) sulfate ABC transporter (permease) [Bacillus halodurans]
Length = 279
Score = 86.6 bits (211), Expect = 6e-16
Identities = 63/264 (23%), Positives = 123/264 (45%), Gaps = 12/264 (4%)
Query: 9 LSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
LS+ ++ + +L+LL L V + S+G+ + +++ +F A+++
Sbjct: 18 LSLGFTMMYLGILVLLPLSMV-FINTSSMGWQ--AFWQAITEPRVLASYRLSFGAAIIAA 74
Query: 69 LATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG----- 123
G+ A+V Y FPGKR + L+ +PF +P+ + + ++ +G +G
Sbjct: 75 SINAVFGLLIAWVLVRYHFPGKRIIDGLVDLPFALPTAVAGIALTTLYTTNGWIGQYLEV 134
Query: 124 -GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
G+ I + +I+A F P VVR++ + I +EA+ LGA F KI P
Sbjct: 135 FGIRIAFTPLGVIVALTFIGLPFVVRMVQPVLQGIEKELEEASACLGANRLQTFSKIIFP 194
Query: 183 LLLPSILVASLLTFTFCFMSF-SIPLILGGYKYAT-IEVAIFSSAMMLLDFKTSSSLALI 240
+LP++L L F + S+ I G T I + + + D+ +++LA +
Sbjct: 195 TVLPALLTGFALAFARALGEYGSVVFISGNLPMQTEITPLLIMTKLEQFDYAGATALAAV 254
Query: 241 QLTISAILMYIYAKLIERYSREEE 264
L IS M ++ +++ +S+ +
Sbjct: 255 MLIIS-FFMLLFINILQWWSQRRQ 277
>pir||G71296 probable spermidine/putrescine ABC transporter, permease protein
(potC) - syphilis spirochete >gi|3322955|gb|AAC65629.1|
(AE001240) spermidine/putrescine ABC transporter,
permease protein (potC) [Treponema pallidum]
Length = 272
Score = 86.6 bits (211), Expect = 6e-16
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 281 IAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNT 340
+A +V F+F+ + +I+ LF+ + SL W+ F + + LN+
Sbjct: 24 LAAVVSFLFLPLAVIA-LFSFNKDKSLIWTGFSLRWYTELF------FYSEKLWSSFLNS 76
Query: 341 LKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTS 400
+ ++ L+A I+ A I +F G+ +V + LP+ V+ G+ L+ F
Sbjct: 77 VLIASVSALVATIVGTAAAIAIRWYRFSGRLYAQVMSLLPMLLPEVITGMAMLVFFSLVR 136
Query: 401 LYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVN 460
L I AH T PF I I +L+EA+ LGA+E + K+ +P I+
Sbjct: 137 LPLGRASIITAHITFCLPFVLLLILTRIDTFDLSLIEAAQDLGANEWQALGKIVIPAIMP 196
Query: 461 GILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMI-ISM 519
GIL + S +S + T+ +A P +TTL L ++ I +ALS+++M I
Sbjct: 197 GILSGFLLSVTLSLEDFVITFFVAGPGSTTLPLYVFSMIRYGVSPIINALSLIMMAGIVG 256
Query: 520 VSFLL 524
V++LL
Sbjct: 257 VAYLL 261
Score = 71.0 bits (171), Expect = 3e-11
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 15/226 (6%)
Query: 3 SDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFV 62
S S + L+ + +P+ ++ + +I GFSL + +Y + +F+
Sbjct: 18 SFSAVLLAAVVSFLFLPLAVIALFSFNKDKSLIWTGFSLRWYTELF---FYSEKLWSSFL 74
Query: 63 QALL----STLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGK 118
++L S L VG A Y F G+ + + + +P ++P VI + ++ F
Sbjct: 75 NSVLIASVSALVATIVGTAAAIAIRWYRFSGRLYAQVMSLLPMLLPEVITGMAMLVFFSL 134
Query: 119 SG-PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFR 177
PLG +II AH+ + P V+ +I + + + EAA LGA +
Sbjct: 135 VRLPLGRA-------SIITAHITFCLPFVLLLILTRIDTFDLSLIEAAQDLGANEWQALG 187
Query: 178 KITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFS 223
KI +P ++P IL LL+ T F I + G T+ + +FS
Sbjct: 188 KIVIPAIMPGILSGFLLSVTLSLEDFVITFFVAGPGSTTLPLYVFS 233
>pir||A81876 sulfate ABC transporter, inner membrane protein NMA1100
[similarity] - Neisseria meningitidis (group A strain
Z2491) >gi|7379795|emb|CAB84363.1| (AL162755) putative
sulphate permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 278
Score = 86.6 bits (211), Expect = 6e-16
Identities = 55/246 (22%), Positives = 118/246 (47%), Gaps = 11/246 (4%)
Query: 14 GLILIPMLLLLSLFYVPMV-RVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
GL ++ + LL+ L + M + +G+S + +++ + + + + L +
Sbjct: 18 GLTVLCLSLLVVLPFAMMAAKAAEIGWS--GFWNTITEPNVLAAVWLSLRMSFYAMLTNV 75
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLG 126
G A+V Y+FPGK +L+ +PF +P+ + + ++ +G +G G+
Sbjct: 76 VFGTLVAWVLVRYEFPGKGLANALVDLPFALPTAVTGIALATLYAPNGWIGRFFEPLGIK 135
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I + I +A V + P +VR + E ++ Y+EAA +LGA + FR++ LP + P
Sbjct: 136 IAFTPVGIWIALVVVSLPFIVRAVQPVLEELSGEYEEAAATLGASRWTTFRRVLLPEITP 195
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEV--AIFSSAMMLLDFKTSSSLALIQLTI 244
++L + + F + + + G E+ I + + D + +S++AL L +
Sbjct: 196 ALLTGAGMMFARATGEYGSVIFIAGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLV 255
Query: 245 SAILMY 250
S ++++
Sbjct: 256 SFVILF 261
>pir||A82426 molybdenum ABC transporter, permease protein VCA0725 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658145|gb|AAF96624.1| (AE004401) molybdenum ABC
transporter, permease protein [Vibrio cholerae]
Length = 232
Score = 86.6 bits (211), Expect = 6e-16
Identities = 64/221 (28%), Positives = 104/221 (46%), Gaps = 10/221 (4%)
Query: 51 EYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVAL 110
+Y +A + A +TL L +GI A+V + F GK + SL+ +P V+P V++
Sbjct: 6 DYEWAALALSLKVAGYATLWLLPIGIVLAWVLARTSFIGKGLIDSLVHLPLVLPPVVIGY 65
Query: 111 GFIIIFGKSGPLG-------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKE 163
+I G+ G +G GL ++W+ +LA + P++VR I S E ++ ++
Sbjct: 66 LLLISMGRQGFIGQWLYQVFGLSFSFSWRGAVLACMVIALPLMVRSIRLSLESVDQKLEQ 125
Query: 164 AAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY---KYATIEVA 220
AA +LGA VF ITLPL LP IL +L F F + + TI +A
Sbjct: 126 AARTLGASPMRVFFTITLPLTLPGILTGVMLAFARSLGEFGATISFVSNIPGETQTIPLA 185
Query: 221 IFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYSR 261
+F+ ++ L I + I+ ++I L R R
Sbjct: 186 MFTFLETPGSEMEAARLCAISIAIALGSLFISEWLSRRMQR 226
Score = 80.4 bits (195), Expect = 5e-14
Identities = 59/200 (29%), Positives = 92/200 (45%), Gaps = 20/200 (10%)
Query: 340 TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDT 399
+LK A L + + + LA V+AR F GKGL++ LPL V++G L++
Sbjct: 15 SLKVAGYATLWLLPIGIVLAWVLARTSFIGKGLIDSLVHLPLVLPPVVIGYLLLISMGRQ 74
Query: 400 SLYGHWLL-------------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASE 446
G WL LA +A P R+I +S+ + + L +A+ TLGAS
Sbjct: 75 GFIGQWLYQVFGLSFSFSWRGAVLACMVIALPLMVRSIRLSLESVDQKLEQAARTLGASP 134
Query: 447 ALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFI---- 499
F + LPL + GIL + +FA S E T S E T+ LA++ F+
Sbjct: 135 MRVFFTITLPLTLPGILTGVMLAFARSLGEFGATISFVSNIPGETQTIPLAMFTFLETPG 194
Query: 500 SSRQFGPASALSVVLMIISM 519
S + A+S+ + + S+
Sbjct: 195 SEMEAARLCAISIAIALGSL 214
>sp|Q01895|CYST_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|7442786|pir||S76741 sulfate transport system
permease protein cysT - Synechocystis sp. (strain PCC
6803) >gi|1653742|dbj|BAA18653.1| (D90916) sulfate
transport system permease protein [Synechocystis sp.]
Length = 286
Score = 86.2 bits (210), Expect = 8e-16
Identities = 60/256 (23%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
++ I LLL+ + + + V S L + + TF+ AL + L +
Sbjct: 28 VVTIIYLLLILVLPIAALLVKSASLGLEGFWQIATTPIAISTYNVTFITALAAGLVNGVM 87
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGIL 128
G A+V FPGK+ + +++ +PF +P+ + L ++ ++G +G G+ I
Sbjct: 88 GTLVAWVLVRCQFPGKKIVDAMVDLPFALPTSVAGLVLATLYSQTGWVGRFFAPFGIQIA 147
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
++ + +A VF + P +VR + + + +EAA SLGA F F ++ P L+P I
Sbjct: 148 FSRLGVFVAMVFISLPFIVRTLQPVLQELEEEAEEAAWSLGATEFQTFWRVIFPPLIPPI 207
Query: 189 LVASLLTFTFCFMSFSIPLILGG---YKYATIEVAIFSSAMMLLDFKTSSSLALIQLTIS 245
L L F+ + +++ +K V +F + D+ ++ + + L++S
Sbjct: 208 LTGIALGFSRAVGEYGSVVLIASNIPFKDLIAPVLVF-ERLEQYDYPAATVIGAVLLSVS 266
Query: 246 AILMYIYAKLIERYSR 261
IL+ I L++++ R
Sbjct: 267 LILLLI-INLLQQWGR 281
>pir||H70179 spermidine/putrescine ABC transporter, permease protein (potB)
homolog - Lyme disease spirochete
>gi|2688563|gb|AAB91526.1| (AE001165)
spermidine/putrescine ABC transporter, permease protein
(potB) [Borrelia burgdorferi]
Length = 269
Score = 86.2 bits (210), Expect = 8e-16
Identities = 61/268 (22%), Positives = 130/268 (47%), Gaps = 17/268 (6%)
Query: 11 MRKGLILIPMLLLLSLFYVPMVRVISLGF-------SLTSLLSVLSDEYYRRVIAFTFVQ 63
++K +++I + LL+ +P++ +I LGF ++ + + +L+ Y + + +
Sbjct: 3 LKKLILIIYSIFLLTFSILPLLIIILLGFLNEKNEFTIYNFIGLLNPSYLN-IFSRSLKL 61
Query: 64 ALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG--- 120
A ++T+ + +G P A++ S + L +I +P + +++ ++ I GK+G
Sbjct: 62 ATIATIFCILIGYPAAWLISLSKKSAQNKLIIMIILPMWINTLLRTYAWMRILGKNGFIN 121
Query: 121 ------PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFV 174
+G L +LYN +A+ + ++ P ++ I + +I P Y EA+ LGA+ +
Sbjct: 122 NLFEKIGIGTLDLLYNEQAVTIGMIYNFLPFMILPIYTGLLKIKPEYIEASQDLGARMWQ 181
Query: 175 VFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTS 234
+ I +PL L + ++ F F I +LGG K I I + + D+ T
Sbjct: 182 ILLYIKIPLTLSYLATGIIMVFIPSITVFIISDLLGGSKQILIGNLISKQFLFIEDWNTG 241
Query: 235 SSLALIQLTISAILMYIYAKLIERYSRE 262
++++ I + + I I KL+ + + E
Sbjct: 242 AAISFILMLVILIFNLIIIKLMRKNNGE 269
>sp|P77505|YDCV_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YDCV
>gi|7446697|pir||F64896 probable membrane protein b1443
- Escherichia coli >gi|1742351|dbj|BAA15072.1| (D90783)
Spermidine/putrescine transport system permease protein
PotC. [Escherichia coli] >gi|1742358|dbj|BAA15078.1|
(D90784) Spermidine/putrescine transport system permease
protein PotC. [Escherichia coli]
>gi|1787714|gb|AAC74525.1| (AE000241) putative transport
system permease protein [Escherichia coli K12]
Length = 264
Score = 85.8 bits (209), Expect = 1e-15
Identities = 62/241 (25%), Positives = 111/241 (45%), Gaps = 8/241 (3%)
Query: 284 LVYFIFVLVFIISPLFAVIYKALMFNDR-LSLEWFRRAFSEEYNPMFGTSSLMTILNTLK 342
+V+ F ++ I + F A F + L+L WF A + L + +LK
Sbjct: 18 VVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQR-------SDILDAVTLSLK 70
Query: 343 FGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY 402
+A LIA++L A + R F GK + + LP+A ++ GL L AF+ +L
Sbjct: 71 VAALATLIALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLALLTAFKTINLE 130
Query: 403 GHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGI 462
+ I + HAT F + R+ +L+EAS+ LGA+ +F V LP + + +
Sbjct: 131 PGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRYVVLPNLSSAL 190
Query: 463 LVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSF 522
L + +FA+S E+ T A E T + + R + +++++M+++ +
Sbjct: 191 LAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVALLVMLVTTLPI 250
Query: 523 L 523
L
Sbjct: 251 L 251
>pir||F70308 Molybdenum transport system permease - Aquifex aeolicus
>gi|2982839|gb|AAC06461.1| (AE000673) Molybdenum
transport system permease [Aquifex aeolicus]
Length = 220
Score = 85.8 bits (209), Expect = 1e-15
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 340 TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD- 398
+LK F LI ++++L L+ ++A ++F+GK L+ TLPL +LG +L F
Sbjct: 8 SLKLSFFTTLILLLISLVLSPLLAFKEFKGKSLVVALVTLPLVLPPTVLGFYLILLFSPE 67
Query: 399 -------TSLYGHWLLIA---LAHATVAY--PFAFRTISISIRKIKKNLLEASLTLGASE 446
S+ G LL + L A+V Y P A ++ ++ KI K L+ S G +
Sbjct: 68 SPFGKLVQSILGKTLLFSFEGLVVASVIYSLPLAVLPLTSAMEKIPKELIYTSYVFGYGK 127
Query: 447 ALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFISSRQ 503
+F +V LPL +NG++ + + SFA + E M+ E TL++ IY + +
Sbjct: 128 VETFFRVILPLSLNGLITSVVMSFANTMGEFGVVLMVGGNIPGETQTLSIFIYDAVQALD 187
Query: 504 FGPASALSVVLMIISMVSFLLIERI 528
+ A SV+L+ +S++ ++ ++
Sbjct: 188 YKTAHRASVLLVGVSLLVMFIVLKV 212
Score = 81.9 bits (199), Expect = 2e-14
Identities = 47/202 (23%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 64 ALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG 123
+ +TL L + + + + + +F GK + +L+T+P V+P ++ I++F P G
Sbjct: 12 SFFTTLILLLISLVLSPLLAFKEFKGKSLVVALVTLPLVLPPTVLGFYLILLFSPESPFG 71
Query: 124 -------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVF 176
G +L++++ +++A V Y+ P+ V + S+ E+I + G F
Sbjct: 72 KLVQSILGKTLLFSFEGLVVASVIYSLPLAVLPLTSAMEKIPKELIYTSYVFGYGKVETF 131
Query: 177 RKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY---KYATIEVAIFSSAMMLLDFKT 233
++ LPL L ++ + +++F F + L++GG + T+ + I+ A+ LD+KT
Sbjct: 132 FRVILPLSLNGLITSVVMSFANTMGEFGVVLMVGGNIPGETQTLSIFIY-DAVQALDYKT 190
Query: 234 SSSLALIQLTISAILMYIYAKL 255
+ +++ + +S ++M+I K+
Sbjct: 191 AHRASVLLVGVSLLVMFIVLKV 212
>pir||T45007 probable ABC-transport protein [imported] - Haloferax volcanii
>gi|4775469|emb|CAB42543.1| (AJ238878) putative
ABC-transporter, subunit [Haloferax volcanii]
Length = 269
Score = 85.8 bits (209), Expect = 1e-15
Identities = 67/240 (27%), Positives = 117/240 (47%), Gaps = 5/240 (2%)
Query: 13 KGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
+GL L+ +LL L+Y+ + + S SL + +++E + V A LSTL +
Sbjct: 22 RGLTLLLAGVLL-LYYLLPIGALVFAQSPASLATDVTNEVVLTAATNSVVAATLSTLVAV 80
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKS--GPLGGLGILYN 130
A G+P AY S F G+ + +L+ +P V+P V+ + + + G + G L + + +
Sbjct: 81 AFGVPLAYWLSRTSFRGRDVILALVMLPLVLPPVVSGMLLLRLVGPAGLGQLTSVPLTRS 140
Query: 131 WKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILV 190
++LA + P +V ++++ ++ + AA SLG R++TLPL IL
Sbjct: 141 LFGVVLAQTYVASPFLVVTAKTAFDGVDRQLEAAARSLGEDRVGSVRRVTLPLAKQGILA 200
Query: 191 ASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMML-LDFKTSSSLALIQLTISAILM 249
LTF F L+L Y T+ V I+ S + LD +L L+ + + AIL+
Sbjct: 201 GVTLTFARAIGEFGATLMLAYYP-RTLPVQIWVSYLSTGLDAAFPVALVLVGIAVGAILL 259
Score = 73.4 bits (177), Expect = 6e-12
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 334 LMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVM------ 387
L N++ ++ L+AV +PLA ++R FRG+ ++ LPL V+
Sbjct: 62 LTAATNSVVAATLSTLVAVAFGVPLAYWLSRTSFRGRDVILALVMLPLVLPPVVSGMLLL 121
Query: 388 -----LGLGYLLAFRDT-SLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLT 441
GLG L + T SL+G + LA VA PF T + + + L A+ +
Sbjct: 122 RLVGPAGLGQLTSVPLTRSLFG----VVLAQTYVASPFLVVTAKTAFDGVDRQLEAAARS 177
Query: 442 LGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISS 501
LG S +V LPL GIL +FA + E T MLA TL + I+ S
Sbjct: 178 LGEDRVGSVRRVTLPLAKQGILAGVTLTFARAIGEFGATLMLAYYPR-TLPVQIWVSYLS 236
Query: 502 RQFGPASALSVVLMIISMVSFLLIERIGEEVW 533
A +++VL+ I++ + LL+ +G W
Sbjct: 237 TGLDAAFPVALVLVGIAVGAILLVHALGTNPW 268
>gi|11467877 probable transport protein [Nephroselmis olivacea]
>gi|5880806|gb|AAD54899.1|AF137379_122 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 284
Score = 85.8 bits (209), Expect = 1e-15
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 1 MKSDSRINLSMRKGLILIPMLLLLSLFYVPMVRVI------SLGFSLTSLLSVLSDEYYR 54
+ S SR L+M+ L+ L L V ++ I S S++ +S+ +
Sbjct: 7 LDSGSRSILTMKNRLVSWAWALTLMYMLVSLILPIGALLQKSSQESVSEFVSIATAPVAM 66
Query: 55 RVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFII 114
A T AL++ L G+ A+V Y+FPG+R L + + +PF +P+ + L
Sbjct: 67 SAYAVTLSSALIAALLNGVFGLLIAWVLVRYEFPGRRLLDAAVDLPFALPTSVAGLTLAT 126
Query: 115 IFGKSGPLG------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSL 168
++ G +G + + + ++LA +F ++P VVR + + + +EAA SL
Sbjct: 127 VYSDQGWIGTWLSSLNIQVAFTRLGVMLAMLFVSFPFVVRTLQPVLQDMERELEEAAWSL 186
Query: 169 GAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG---YKYATIEVAIFSSA 225
GA F F ++ P L+P+++ L F+ + +I+ G ++ V IF
Sbjct: 187 GASPFNTFLRVLCPPLMPAMMTGIALAFSRAVGEYGSVVIVSGNIPFQDLIAPVLIF-QR 245
Query: 226 MMLLDFKTSSSLALIQLTISAILM 249
+ D+ ++ + + L IS L+
Sbjct: 246 LEQYDYSGATVIGTVVLLISLTLL 269
Score = 74.5 bits (180), Expect = 3e-12
Identities = 58/256 (22%), Positives = 118/256 (45%), Gaps = 26/256 (10%)
Query: 288 IFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIA 347
+++LV +I P+ A++ K+ + + SE + ++ TL IA
Sbjct: 31 MYMLVSLILPIGALLQKSS-----------QESVSEFVSIATAPVAMSAYAVTLSSALIA 79
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL 407
L+ + L +A V+ R +F G+ LL+ LP A + + GL + D G WL
Sbjct: 80 ALLNGVFGLLIAWVLVRYEFPGRRLLDAAVDLPFALPTSVAGLTLATVYSDQGWIGTWLS 139
Query: 408 ------------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVEL 455
+ LA V++PF RT+ ++ +++ L EA+ +LGAS +FL+V
Sbjct: 140 SLNIQVAFTRLGVMLAMLFVSFPFVVRTLQPVLQDMERELEEAAWSLGASPFNTFLRVLC 199
Query: 456 PLIVNGILVASIFSFAISAAELATTYMLASP---ENTTLTLAIYKFISSRQFGPASALSV 512
P ++ ++ +F+ + E + +++ ++ + I++ + + A+ +
Sbjct: 200 PPLMPAMMTGIALAFSRAVGEYGSVVIVSGNIPFQDLIAPVLIFQRLEQYDYSGATVIGT 259
Query: 513 VLMIISMVSFLLIERI 528
V+++IS+ L I I
Sbjct: 260 VVLLISLTLLLAINWI 275
>gi|10955068 agtC [Agrobacterium tumefaciens]
>gi|6689866|gb|AAF23879.1|AF117204_4 (AF242881) agtC
[Agrobacterium tumefaciens]
Length = 313
Score = 85.8 bits (209), Expect = 1e-15
Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 18/264 (6%)
Query: 16 ILIPMLLLLSL-FYVPMVRVISLGF---SLTSLLSVLSDEYYRRVIAFTFVQALLSTLAT 71
+L+P+ ++L L F+VP++ ++ F ++ L + + Y ++I T +L +T T
Sbjct: 14 LLLPVFVVLLLAFFVPLLAILPQAFGGDAVARFLKIFAGPVYLKIIWTTVRMSLEATAIT 73
Query: 72 LAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG------- 124
L V P A++ S L L+ VPF+ ++ +I I G+ G + G
Sbjct: 74 LIVSFPLAWLLSRATGIKALLLGLLVLVPFLTSVLVRTFAWIAILGQRGLVNGTLLSLGL 133
Query: 125 ----LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
L +L++ A++LA V + P++V + + RI+ AA +LGA + +
Sbjct: 134 ISEPLPLLFSEPAVVLALVHSSIPMMVFSLVTVLRRIDGRILLAANTLGANPLRAWLGVV 193
Query: 181 LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLAL- 239
+PL + I ++TF F SF P +LG + + I S D+ +++L +
Sbjct: 194 IPLSIRGIQSGVIITFLFTIASFIAPALLGNQRQQMLAQVIQSEIETGADWALAAALGIT 253
Query: 240 --IQLTISAILMYIYAKLIERYSR 261
+ TI + + + A+L+ R+ R
Sbjct: 254 LAVVATIVVVGLSMVARLLSRWQR 277
>pir||E83605 probable permease of ABC transporter PA0324 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946171|gb|AAG03713.1|AE004470_7 (AE004470) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 262
Score = 85.8 bits (209), Expect = 1e-15
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
Query: 16 ILIPMLLLLSL-FYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
+ IP+L+L+ L F + FSL V +D R + + A L+TLA+ +
Sbjct: 24 LYIPILVLVVLSFNSGQSATLWESFSLKWYAVVANDPEILRAAKNSLLVATLATLASTVL 83
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAI 134
A F G+ + ++ +P ++P ++ A+ ++ F +G+ + I
Sbjct: 84 ATLAALGMRGRAFRGQTLMNGVLGLPLLVPEIVTAVATLMFFSF------IGLKLSLFTI 137
Query: 135 ILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLL 194
++AH+ + P I + E ++P EAA L A + F KITLPLL+P +L ++L
Sbjct: 138 LIAHIVFCIPFAYLPIRARLEGLDPRLAEAAADLYASPWKAFWKITLPLLMPGVLSGAML 197
Query: 195 TFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFK---TSSSLALIQLTISAILMYI 251
F F I + G T+ V IFSS M + K SS + +I + A+ Y+
Sbjct: 198 AFIISMDDFVITYFVAGAGATTLPVYIFSSIRMGISPKINAISSIILMISIAFVALSYYL 257
Score = 81.1 bits (197), Expect = 3e-14
Identities = 60/244 (24%), Positives = 110/244 (44%), Gaps = 7/244 (2%)
Query: 287 FIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFI 346
F+++ + ++ L ++ + SL+W+ ++ L N+L +
Sbjct: 23 FLYIPILVLVVLSFNSGQSATLWESFSLKWYAVVANDP-------EILRAAKNSLLVATL 75
Query: 347 AVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWL 406
A L + +LA A + FRG+ L+ LPL ++ + L+ F L
Sbjct: 76 ATLASTVLATLAALGMRGRAFRGQTLMNGVLGLPLLVPEIVTAVATLMFFSFIGLKLSLF 135
Query: 407 LIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVAS 466
I +AH PFA+ I + + L EA+ L AS +F K+ LPL++ G+L +
Sbjct: 136 TILIAHIVFCIPFAYLPIRARLEGLDPRLAEAAADLYASPWKAFWKITLPLLMPGVLSGA 195
Query: 467 IFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIE 526
+ +F IS + TY +A TTL + I+ I +A+S ++++IS+ L
Sbjct: 196 MLAFIISMDDFVITYFVAGAGATTLPVYIFSSIRMGISPKINAISSIILMISIAFVALSY 255
Query: 527 RIGE 530
+G+
Sbjct: 256 YLGQ 259
>pir||F83194 polyamine transport protein PotC PA3609 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949766|gb|AAG06997.1|AE004781_5 (AE004781)
polyamine transport protein PotC [Pseudomonas
aeruginosa]
Length = 256
Score = 85.8 bits (209), Expect = 1e-15
Identities = 62/241 (25%), Positives = 116/241 (47%), Gaps = 8/241 (3%)
Query: 290 VLVFIISPLFAVIYKALMFND-RLSLEWFRRAFSEEYNPMFGTSSLM-TILNTLKFGFIA 347
V +F+ PL V+ + FND RL+ EW + Y +FG ++ N+L ++
Sbjct: 14 VYLFLYVPLVIVVLYS--FNDSRLNAEWVGFTL-DWYRKLFGNRDMLQAAANSLVIALVS 70
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLL 407
+A +L + R K R +L + P+A +++G+ ++ F ++ L
Sbjct: 71 ASVATLLGTLAGVALHRFKLR---VLPLLVLTPIAIPELLMGVSLVIFFIGLNMSLGMLS 127
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ LAH T + F + + + ++L EA+ LGA+ SF V LPLI+ GI+ ++
Sbjct: 128 VTLAHITFSVGFVALVVQARMSGMDESLTEAARDLGATPWQSFHLVTLPLIMPGIVAGAL 187
Query: 468 FSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIER 527
+F +S + T+ A TL IY I +A+S +LM++++V ++ +
Sbjct: 188 MAFTLSIDDFVITFFTAGGGFATLPTQIYTMIKIAVTPEVNAVSTLLMLLTLVLIVIASK 247
Query: 528 I 528
+
Sbjct: 248 L 248
Score = 76.5 bits (185), Expect = 7e-13
Identities = 63/258 (24%), Positives = 119/258 (45%), Gaps = 23/258 (8%)
Query: 11 MRKGLILIPMLLLLSLF-YVPMVRVISLGFSLTSLLSV---LSDEYYRRVI--------- 57
MR+ +L L+ LF YVP+V V+ F+ + L + + ++YR++
Sbjct: 1 MRRPYLLWSATALVYLFLYVPLVIVVLYSFNDSRLNAEWVGFTLDWYRKLFGNRDMLQAA 60
Query: 58 AFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFG 117
A + V AL+S +G + R L L+ P +P +++ + +I F
Sbjct: 61 ANSLVIALVSASVATLLGTLAGVALHRFKL---RVLPLLVLTPIAIPELLMGVSLVIFFI 117
Query: 118 KSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFR 177
GL + ++ LAH+ ++ V V+ + ++ EAA LGA + F
Sbjct: 118 ------GLNMSLGMLSVTLAHITFSVGFVALVVQARMSGMDESLTEAARDLGATPWQSFH 171
Query: 178 KITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSL 237
+TLPL++P I+ +L+ FT F I G +AT+ I++ + + + ++
Sbjct: 172 LVTLPLIMPGIVAGALMAFTLSIDDFVITFFTAGGGFATLPTQIYTMIKIAVTPEVNAVS 231
Query: 238 ALIQLTISAILMYIYAKL 255
L+ L ++ +L+ I +KL
Sbjct: 232 TLLML-LTLVLIVIASKL 248
>pir||D81147 sulfate ABC transporter, permease protein NMB0881 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226119|gb|AAF41292.1| (AE002440) sulfate ABC
transporter, permease protein [Neisseria meningitidis
MC58]
Length = 278
Score = 85.0 bits (207), Expect = 2e-15
Identities = 54/246 (21%), Positives = 117/246 (46%), Gaps = 11/246 (4%)
Query: 14 GLILIPMLLLLSLFYVPMV-RVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
GL ++ + LL+ L + M + +G+ + +++ + + + + L +
Sbjct: 18 GLTVLCLSLLVVLPFAMMAAKAAEIGWG--GFWNTIAEPNVLAAVWLSLRMSFYAMLTNV 75
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLG 126
G A+V Y+FPGK +L+ +PF +P+ + + ++ +G +G G+
Sbjct: 76 VFGTLVAWVLVRYEFPGKGLANALVDLPFALPTAVTGIALATLYAPNGWIGRFFEPLGIK 135
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I + I +A V + P +VR + E ++ Y+EAA +LGA + FR++ LP + P
Sbjct: 136 IAFTPVGIWIALVVVSLPFIVRAVQPVLEELSGEYEEAAATLGASRWTTFRRVLLPEITP 195
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEV--AIFSSAMMLLDFKTSSSLALIQLTI 244
++L + + F + + + G E+ I + + D + +S++AL L +
Sbjct: 196 ALLTGAGMMFARATGEYGSVIFIAGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLV 255
Query: 245 SAILMY 250
S ++++
Sbjct: 256 SFVILF 261
>pir||G82694 ABC transporter sulfate permease XF1346 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106343|gb|AAF84155.1|AE003966_16 (AE003966) ABC
transporter sulfate permease [Xylella fastidiosa]
Length = 319
Score = 85.0 bits (207), Expect = 2e-15
Identities = 68/267 (25%), Positives = 118/267 (43%), Gaps = 23/267 (8%)
Query: 15 LILIPMLLLLSLFYVPMVRVIS--LGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATL 72
LIL + LL+ +P++ V S L + L +SD I T + ++ +
Sbjct: 41 LILGALGFLLAFLLLPLMLVFSEALRGGVQVFLRAVSDPDALAAIRLTMLVTMIVLPVNM 100
Query: 73 AVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG------------ 120
G+ A+ S + FPGKR L SLI +PF + V+ L F++IFG+ G
Sbjct: 101 VFGVAVAWAVSKHQFPGKRLLVSLIDLPFSVSPVVAGLVFVLIFGRQGWAWPLIEDGVRF 160
Query: 121 --PLGG------LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKG 172
PL G +++ I+LA +F +P + R + E+ + AA+SLGA G
Sbjct: 161 SLPLFGEVMVKLPRVVFALPGIVLATIFVTFPFIARELMPLMEQQGNEEELAALSLGASG 220
Query: 173 FVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFK 232
+ F ++TLP + +L +LL F ++ G+ ++ ++
Sbjct: 221 WQTFWRVTLPNIRWGLLYGALLCGARAMGEFGAVSVVSGHIRGRTNTMPLHVEILYSEYA 280
Query: 233 TSSSLALIQ-LTISAILMYIYAKLIER 258
S++ A L +SA+L +E+
Sbjct: 281 YSAAFACASLLALSALLTLALKAFLEK 307
>pir||B83610 sulfate transport protein CysT PA0282 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946125|gb|AAG03671.1|AE004466_5 (AE004466) sulfate
transport protein CysT [Pseudomonas aeruginosa]
Length = 272
Score = 85.0 bits (207), Expect = 2e-15
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 25 SLFYVPMVRVISLG--FSLTSLLS------VLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
+L Y+ ++ +I LG F T+ LS ++S + +F AL + + +G
Sbjct: 19 TLVYLSLLVLIPLGAMFLKTTQLSWEQFWAIISAPRVLAALKLSFGTALAAAVLNGLIGT 78
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGILYN 130
A+V Y+FPG++ + ++I +PF +P+ + + ++ +G +G G I Y
Sbjct: 79 LLAWVLVRYEFPGRKIIDAMIDLPFALPTAVAGIALTALYAPAGLVGQFASDLGFKIAYT 138
Query: 131 WKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILV 190
I LA F P VVR + I +EAA LGA+ VFR I +P LLP+ L
Sbjct: 139 PLGITLALTFVTLPFVVRTVQPVLADIPKEVEEAAACLGARPLQVFRHILVPALLPAWLT 198
Query: 191 ASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMML--LDFKTSSSLALIQLTISAIL 248
L F + + + G E+ + L D+ ++++ ++ L +S IL
Sbjct: 199 GFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGATAIGVLMLVVSFIL 258
Query: 249 MYIYAKLIER 258
+ + L R
Sbjct: 259 LLLINLLQRR 268
>sp|P45322|MODB_HAEIN MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|1075026|pir||A64137 molybdenum transport protein -
Haemophilus influenzae (strain Rd KW20)
>gi|1574545|gb|AAC23338.1| (U32842) molybdenum ABC
transporter, permease protein (modB) [Haemophilus
influenzae Rd]
Length = 229
Score = 84.3 bits (205), Expect = 3e-15
Identities = 60/211 (28%), Positives = 106/211 (49%), Gaps = 14/211 (6%)
Query: 64 ALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG 123
A+ S L +L + I A++ + +F GK + +I +P V+P V++ ++ G++G +G
Sbjct: 13 AVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLLVAMGRNGFIG 72
Query: 124 -------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVF 176
GL ++WK +L+ +P+VVR I S E I+ ++AA +LGA + VF
Sbjct: 73 KYLYQWFGLSFGFSWKGAVLSSAVVAFPLVVRAIRLSLENIDIKLEQAAQTLGASAWRVF 132
Query: 177 RKITLPLLLPSILVASLLTFTFCFMSFSIPL-----ILGGYKYATIEVAIFSSAMMLLDF 231
ITLPL LP +L +L F F + I G + TI +A++S
Sbjct: 133 FTITLPLSLPGVLAGLVLGFARSLGEFGATITFVSNIAG--ETQTIPLAMYSFIQTPGAE 190
Query: 232 KTSSSLALIQLTISAILMYIYAKLIERYSRE 262
+ ++ L L + +S I + + L +R ++
Sbjct: 191 EQTARLCLFAIILSLISLLLSEWLSKRMQKK 221
Score = 81.9 bits (199), Expect = 2e-14
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 340 TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDT 399
+L ++L ++ LA+ +A ++AR+ F GK L+ LPL V++G L+A
Sbjct: 9 SLSVAVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLLVAMGRN 68
Query: 400 SLYGHWLL-------------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASE 446
G +L L+ A VA+P R I +S+ I L +A+ TLGAS
Sbjct: 69 GFIGKYLYQWFGLSFGFSWKGAVLSSAVVAFPLVVRAIRLSLENIDIKLEQAAQTLGASA 128
Query: 447 ALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLAIYKFISSRQ 503
F + LPL + G+L + FA S E T S E T+ LA+Y FI +
Sbjct: 129 WRVFFTITLPLSLPGVLAGLVLGFARSLGEFGATITFVSNIAGETQTIPLAMYSFIQTPG 188
Query: 504 FGPASA-LSVVLMIISMVSFLLIERIGEEV 532
+A L + +I+S++S LL E + + +
Sbjct: 189 AEEQTARLCLFAIILSLISLLLSEWLSKRM 218
>gb|AAG19864.1| (AE005071) sulfate transport system permease protein; CysT2
[Halobacterium sp. NRC-1]
Length = 269
Score = 84.3 bits (205), Expect = 3e-15
Identities = 56/250 (22%), Positives = 117/250 (46%), Gaps = 20/250 (8%)
Query: 9 LSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
L + G +L+ L++ + ++ +G LT+ + R I + A +T
Sbjct: 16 LPVALGAVLVAYLVVPFVAFLAHTGAADIGSQLTAPDA-------RAAIRTSLATATAAT 68
Query: 69 LATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG----- 123
+ G+P AY + FPGKR + L+ +P V+P ++ + + G+ PLG
Sbjct: 69 VLATVFGVPLAYTLARATFPGKRLVNGLVVLPLVVPPLVGGTMLLTVVGRFTPLGAWAAA 128
Query: 124 -GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
G+ + + ++LA F P +V S ++ ++P +++AA SLG F +++P
Sbjct: 129 AGVPLTNSAIGVVLAQTFVAAPFLVVAARSGFDGVDPRFEDAARSLGRGPLATFWTVSIP 188
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
L P+IL +LTF F +++ T+ + I+ + F++ A++ L
Sbjct: 189 LARPAILAGIVLTFARALGEFGATMMVATTP-RTVPIRIW------IAFRSDGIDAVVPL 241
Query: 243 TISAILMYIY 252
++ +++ ++
Sbjct: 242 AVALLVITLF 251
>gi|7524888 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023606|sp|P56343|CYST_CHLVU PROBABLE SULFATE
TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|7442819|pir||T07318 sulfate transport protein cysT -
Chlorella vulgaris chloroplast
>gi|2224482|dbj|BAA57966.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 266
Score = 83.9 bits (204), Expect = 4e-15
Identities = 66/269 (24%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 272 KRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGT 331
KR I+ +L YF F+L+ + LF +I++ W + +P+ +
Sbjct: 2 KRYPTFIKNSILLFYFFFLLILPVVVLFLLIFQN---------NW-HEVLRKATDPIAVS 51
Query: 332 SSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLG 391
+ L+T+ + F A L+ I + V+ R +F G+ L+ LP A + + GL
Sbjct: 52 AYLLTV----QMAFYAALVNSIFGFIITWVLTRYQFWGREFLDAAVDLPFALPTSVAGLT 107
Query: 392 YLLAFRDT-------SLYGHWLL-----IALAHATVAYPFAFRTISISIRKIKKNLLEAS 439
+ D +L+G ++ + LA V++PF RT+ +++++K+L EA+
Sbjct: 108 LATVYGDQGWIGSLFNLFGFQIVFTKIGVLLAMIFVSFPFVIRTLQPVLQEMEKSLEEAA 167
Query: 440 LTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASP---ENTTLTLAIY 496
+LGAS +F KV LP + + SF+ + E + M++S ++ ++ IY
Sbjct: 168 WSLGASSWETFRKVILPTLWPALFTGFTLSFSRALGEFGSIVMISSNLPFKDLVASVLIY 227
Query: 497 KFISSRQFGPASALSVVLMIISMVSFLLI 525
+ + + AS + V+++I++ + LLI
Sbjct: 228 QSLEQYDYLGASVIGAVVLLIALFTLLLI 256
Score = 81.9 bits (199), Expect = 2e-14
Identities = 55/246 (22%), Positives = 115/246 (46%), Gaps = 19/246 (7%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
L+++P+++L L + + L ++ Y + F AL++++ +
Sbjct: 20 LLILPVVVLFLLIFQNNWHEV-----LRKATDPIAVSAYLLTVQMAFYAALVNSIFGFII 74
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWK-- 132
+V + Y F G+ FL + + +PF +P+ + L ++G G +G L L+ ++
Sbjct: 75 ----TWVLTRYQFWGREFLDAAVDLPFALPTSVAGLTLATVYGDQGWIGSLFNLFGFQIV 130
Query: 133 ----AIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
++LA +F ++P V+R + + + +EAA SLGA + FRK+ LP L P++
Sbjct: 131 FTKIGVLLAMIFVSFPFVIRTLQPVLQEMEKSLEEAAWSLGASSWETFRKVILPTLWPAL 190
Query: 189 LVASLLTFTFCFMSFSIPLILGG---YKYATIEVAIFSSAMMLLDFKTSSSLALIQLTIS 245
L+F+ F +++ +K V I+ S + D+ +S + + L I+
Sbjct: 191 FTGFTLSFSRALGEFGSIVMISSNLPFKDLVASVLIYQS-LEQYDYLGASVIGAVVLLIA 249
Query: 246 AILMYI 251
+ +
Sbjct: 250 LFTLLL 255
>sp|P21409|SFUB_SERMA IRON(III)-TRANSPORT SYSTEM PERMEASE PROTEIN SFUB
>gi|152861|gb|AAA26574.1| (M33815) protein (sufB)
[Serratia marcescens]
Length = 527
Score = 83.5 bits (203), Expect = 5e-15
Identities = 111/518 (21%), Positives = 205/518 (39%), Gaps = 39/518 (7%)
Query: 12 RKGLILIPMLLLLSLF-YVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLA 70
R G I++ +LLSL +P+ VI + F + +R +A + LL +
Sbjct: 23 RPGAIVVVSAVLLSLLALLPLGFVIGVAFETG--WQTVKALVFRPRVAELLLNTLLLVVL 80
Query: 71 TLAV----GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG 126
TL + G+ A++ PG+R L T P +P+ + + +I + LG
Sbjct: 81 TLPICAVLGVALAWLTERTTLPGRRLWAVLATAPLAVPAFVQSYAWISLVPSMHGLG--- 137
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
A + V +P + A+ R++P ++ A SLG++ VF ++ LP L
Sbjct: 138 ------AGVFISVLAYFPFIYLPAAAVLRRLDPGIEDVATSLGSRPPAVFFRVVLPQLKL 191
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLA--LIQLTI 244
++ SLL + + ++ ++ T AIF + ++ LA L+ +
Sbjct: 192 AVCGGSLLIALHLLAEYGLYAMI---RFDTFTTAIFDQFQSTFNGPAANMLAGVLVLCCL 248
Query: 245 SAILMYIYAKLIERYSREEEQRVLI-AKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIY 303
+L+ ++ RY+R +RL + +A+L+ + + P F +
Sbjct: 249 GLLLLEAISRGRARYARVGSGSARSQTPRRLSPPLAALALLLPIALTALALGVP-FITLA 307
Query: 304 KALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIA 363
+ L E +R A E P + TL L+ + A+P+A +
Sbjct: 308 RWLWLG---GFEVWRNA---ELWP--------ALWQTLSLSAAGALLITLCAIPMAWLSV 353
Query: 364 REKFRGKGLLE--VFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAF 421
R R +LE + T L V L L + +Y + + LA+ + P A
Sbjct: 354 RYPARLYRVLEGCNYVTSSLPGIVVALALVTITIHSFRPIYQTEITLLLAYLLMFMPRAL 413
Query: 422 RTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTY 481
+ I + L + +LG S A + L L G+ + F A EL T
Sbjct: 414 INLRAGIAQAPVELENVARSLGKSPAQALWSTTLRLAAPGVAAGAALVFLAIANELTATL 473
Query: 482 MLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISM 519
+LA TL + S + A+ +++++ +S+
Sbjct: 474 LLAPNGTRTLATGFWALTSEIDYVAAAPYALIMVALSL 511
>pir||A81449 probable molybdenum transport system permease protein Cj0301c
[imported] - Campylobacter jejuni (strain NCTC 11168)
>gi|6967775|emb|CAB72768.1| (AL139074) putative
molybdenum transport system permease protein
[Campylobacter jejuni]
Length = 224
Score = 83.5 bits (203), Expect = 5e-15
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 50 DEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVA 109
D + + + TF A ++T +G+ AY+ S FP K L+S I++P ++P ++
Sbjct: 3 DPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKTILQSFISLPLILPPSVLG 62
Query: 110 LGFIIIFGKSGPLG-------GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYK 162
++ F + LG L ++++++ ++ A + ++ P +V + S++ INP+
Sbjct: 63 FYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFSLPFMVNPLQSAFSSINPNLL 122
Query: 163 EAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIF 222
+A+ SLG ++ LP I A ++F F + +++GG+K VA
Sbjct: 123 DASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTVGEFGVVMMIGGHKQGETLVASI 182
Query: 223 S--SAMMLLDFKTSSSLALIQLTISAILMY 250
+ + +L++ + A I S ++++
Sbjct: 183 AIYDELEILNYSLAHQYAFILFIFSFLVLF 212
>gi|10954680 probable mikimopine transporter gene~similar to potC gene
[Agrobacterium rhizogenes] >gi|10567344|dbj|BAB16153.1|
(AP002086) probable mikimopine transporter gene~similar
to potC gene [Agrobacterium rhizogenes]
Length = 266
Score = 83.5 bits (203), Expect = 5e-15
Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 16 ILIPMLLLLSLFYVPMVRVIS-LGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
+L P+L+L+++ + P V GF+L ++ + + + +++ +AT +
Sbjct: 22 LLAPLLILIAVSFNPTSMVFPPQGFTLKWYGTIFDKPDFLSAAVSSTILGVITAVATTTL 81
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALG-FIIIFGKSGPLGGLGILYNWKA 133
G+ A Y K + SL+ P +P+VIVAL F IIF +GI N
Sbjct: 82 GVLAAIGLQRYTGAAKPIVSSLLMSPLFIPAVIVALALFQIIFI-------MGIGNNIWV 134
Query: 134 IILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASL 193
++ AH+ P VR + + E + +EAA+S+GA R++TLPLL SI+ + +
Sbjct: 135 LLAAHIVVTIPYPVRNVMAQMENFDVRLEEAALSVGATPAQALRRVTLPLLKASIIPSLI 194
Query: 194 LTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKT-SSSLALIQLTISAILMYIY 252
+ F + ++++ + L + T+ + + A + +++ ++++ I + S IL+ I
Sbjct: 195 IVFVLSWNNYTVSVFLANKDWTTLPLQL--RAYLQYEYEPFVAAMSTILIIASVILLVIV 252
Query: 253 AKLI 256
K +
Sbjct: 253 DKTV 256
>pir||QRSEUB sfuB protein - Serratia marcescens
Length = 527
Score = 83.1 bits (202), Expect = 7e-15
Identities = 111/518 (21%), Positives = 205/518 (39%), Gaps = 39/518 (7%)
Query: 12 RKGLILIPMLLLLSLF-YVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLA 70
R G I++ +LLSL +P+ VI + F + +R +A + LL +
Sbjct: 23 RPGAIVVVSAVLLSLLALLPLGFVIGVAFETG--WQTVKALVFRPRVAELLLNTLLLVVL 80
Query: 71 TLAV----GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG 126
TL + G+ A++ PG+R L T P +P+ + + +I + LG
Sbjct: 81 TLPICAVLGVALAWLTERTTLPGRRLWAVLATAPLAVPAFVQSYAWISLVPSMHGLG--- 137
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
A + V +P + A+ R++P ++ A SLG++ VF ++ LP L
Sbjct: 138 ------AGVFISVLAYFPFIYLPAAAVLRRLDPGIEDVATSLGSRPPAVFFRVVLPQLKL 191
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLA--LIQLTI 244
++ SLL + + ++ ++ T AIF + ++ LA L+ +
Sbjct: 192 AVWGGSLLIALHLLAEYGLYAMI---RFDTFTTAIFDQFQSTFNGPAANMLAGVLVLCCL 248
Query: 245 SAILMYIYAKLIERYSREEEQRVLI-AKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIY 303
+L+ ++ RY+R +RL + +A+L+ + + P F +
Sbjct: 249 GLLLLEAISRGRARYARVGSGSARSQTPRRLSPPLAALALLLPIALTALALGVP-FITLA 307
Query: 304 KALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIA 363
+ L E +R A E P + TL L+ + A+P+A +
Sbjct: 308 RWLWLG---GFEVWRNA---ELWP--------ALWQTLSLSAAGALLITLCAIPMAWLSV 353
Query: 364 REKFRGKGLLE--VFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAF 421
R R +LE + T L V L L + +Y + + LA+ + P A
Sbjct: 354 RYPARLYRVLEGCNYVTSSLPGIVVALALVTITIHSFRPIYQTEITLLLAYLLMFMPRAL 413
Query: 422 RTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTY 481
+ I + L + +LG S A + L L G+ + F A EL T
Sbjct: 414 INLRAGIAQAPVELENVARSLGKSPAQALWSTTLRLAAPGVAAGAALVFLAIANELTATL 473
Query: 482 MLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISM 519
+LA TL + S + A+ +++++ +S+
Sbjct: 474 LLAPNGTRTLATGFWALTSEIDYVAAAPYALIMVALSL 511
>pir||G64470 sulfate/thiosulfate transport protein homolog - Methanococcus
jannaschii >gi|1592012|gb|AAB99376.1| (U67576) sulfate
transport system permease protein (cysT) [Methanococcus
jannaschii]
Length = 249
Score = 83.1 bits (202), Expect = 7e-15
Identities = 66/257 (25%), Positives = 114/257 (43%), Gaps = 26/257 (10%)
Query: 281 IAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNT 340
IA+ V+ + + +FI P+ ++ N L E AF T
Sbjct: 6 IAMTVFLVMIFLFIFLPIIYMLSNPGDLNQLLDKEVIE-AFK----------------TT 48
Query: 341 LKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLG---LGYLLAFR 397
L G +A LIA+I +P ++AR F+ K +E LP+A ++G L ++
Sbjct: 49 LLAGAVATLIALIFGIPTGYILARYDFKFKSFVEAVLDLPMAIPHSVIGIIILSFIYGID 108
Query: 398 DTSLYGHWLL-----IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLK 452
+ G +++ I + V PF +I + + + S TLGAS+ +F +
Sbjct: 109 IINFIGRYVVDNFWGIVTVYLFVGIPFMVNSIRDGFLSVDEEIEYVSRTLGASKIRTFFE 168
Query: 453 VELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSV 512
+ LPLI N I+ I SFA +E+ ++A T+ + IY+ S + +SV
Sbjct: 169 ISLPLIKNNIISGIILSFARGISEVGAILIIAYYPK-TVPILIYERFMSFGLDASKPISV 227
Query: 513 VLMIISMVSFLLIERIG 529
+++IS+ F L+ G
Sbjct: 228 GMILISIALFALLRMFG 244
Score = 71.8 bits (173), Expect = 2e-11
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 9/229 (3%)
Query: 21 LLLLSLF-YVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGA 79
L+++ LF ++P++ ++S L LL D+ T + ++TL L GIP
Sbjct: 12 LVMIFLFIFLPIIYMLSNPGDLNQLL----DKEVIEAFKTTLLAGAVATLIALIFGIPTG 67
Query: 80 YVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG--ILYNWKAIILA 137
Y+ + YDF K F+ +++ +P +P ++ + + + +G ++ N+ I+
Sbjct: 68 YILARYDFKFKSFVEAVLDLPMAIPHSVIGIIILSFIYGIDIINFIGRYVVDNFWGIVTV 127
Query: 138 HVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFT 197
++F P +V I + ++ + + +LGA F +I+LPL+ +I+ +L+F
Sbjct: 128 YLFVGIPFMVNSIRDGFLSVDEEIEYVSRTLGASKIRTFFEISLPLIKNNIISGIILSFA 187
Query: 198 FCFMSFSIPLILGGYKYATIEVAIFSSAMML-LDFKTSSSLALIQLTIS 245
LI+ Y T+ + I+ M LD S+ +I ++I+
Sbjct: 188 RGISEVGAILIIAYYP-KTVPILIYERFMSFGLDASKPISVGMILISIA 235
>gb|AAA83839.1| (M16182) unknown protein [Escherichia coli]
Length = 200
Score = 82.7 bits (201), Expect = 9e-15
Identities = 55/198 (27%), Positives = 100/198 (49%), Gaps = 11/198 (5%)
Query: 79 AYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG-------GLGILYNW 131
A++ FPGK L S++ +P V+P V+V ++ G+ G +G G+ ++W
Sbjct: 4 AWLLVRCSFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSW 63
Query: 132 KAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVA 191
+ +LA ++P++VR I + E ++ ++AA +LGA + VF ITLPL LP I+V
Sbjct: 64 RGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVG 123
Query: 192 SLLTFTFCFMSFSIPLILGGY---KYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAIL 248
++L F F + + TI A+++ ++ L +I + ++ I
Sbjct: 124 TVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMIS 183
Query: 249 MYIYAKLIERYSREEEQR 266
+ I ++ + R SRE R
Sbjct: 184 LLI-SEWLARISRERAGR 200
>pir||A83608 polyamine transport protein PotI PA0304 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946149|gb|AAG03693.1|AE004468_5 (AE004468)
polyamine transport protein PotI [Pseudomonas
aeruginosa]
Length = 289
Score = 82.3 bits (200), Expect = 1e-14
Identities = 67/276 (24%), Positives = 130/276 (46%), Gaps = 14/276 (5%)
Query: 1 MKSDSRINLSMRKGLILI--PMLLLLSL-FYVPMVRVISLGFSLTSLLSVLSDEYYRRVI 57
MK + N+ + GL+ I PML+L+ F + + G+S+ + +L + +
Sbjct: 1 MKRWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLVSSV 60
Query: 58 AFTFVQALLSTLATLAVGIPGAYVFSHYD-FPGKRFLRSLITVPFVMPSVIVALGFIIIF 116
+ A + +++ +G A+V + F G+ ++T P VMP VI L +++F
Sbjct: 61 GRSLEIAFYTAFSSVFLGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLLF 120
Query: 117 GKSGPLGGL----GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKG 172
L G GI+ W +AH + V V+++ ++ +EAAM LGAK
Sbjct: 121 VAMAQLIGWPQERGIVTIW----IAHTSFCSSYVAVVVSARLRELDLSIEEAAMDLGAKP 176
Query: 173 FVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFK 232
+ VF IT+P++ PS+ +++F + + G T+ + +FS+ + + +
Sbjct: 177 WKVFLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPE 236
Query: 233 TSSSLALIQLTISAILMYIYAKLIERYSREEEQRVL 268
++ +LI L++S L +A R + E +R +
Sbjct: 237 INAVASLILLSVS--LFTFFAWYFTRQAEERRRRAI 270
Score = 74.5 bits (180), Expect = 3e-12
Identities = 64/248 (25%), Positives = 113/248 (44%), Gaps = 13/248 (5%)
Query: 285 VYFIFVLVFIISP-LFAVIYKALMFN-DRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLK 342
V I L+FI P L VIY FN +L W + + T + ++ +L+
Sbjct: 9 VMLIVGLLFIYLPMLILVIYS---FNASKLVTVWGGWSVKWYVGLLDNTQLVSSVGRSLE 65
Query: 343 FGFIAVLIAVILALPLARVIAR-EKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSL 401
F +V L A V+ R +FRG+ L T PL V+ GL LL F +
Sbjct: 66 IAFYTAFSSVFLGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLLFVAMAQ 125
Query: 402 YGHW------LLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVEL 455
W + I +AH + + +S +R++ ++ EA++ LGA FL + +
Sbjct: 126 LIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRELDLSIEEAAMDLGAKPWKVFLLITI 185
Query: 456 PLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASAL-SVVL 514
P+I + + SFA+S +L ++ P +TTL + ++ + +A+ S++L
Sbjct: 186 PMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVASLIL 245
Query: 515 MIISMVSF 522
+ +S+ +F
Sbjct: 246 LSVSLFTF 253
>pir||F83605 probable permease of ABC transporter PA0325 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946172|gb|AAG03714.1|AE004470_8 (AE004470) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 309
Score = 82.3 bits (200), Expect = 1e-14
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 46 SVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPS 105
S++ + Y + +F +LL+TL LA+G P A + + L L+TVPF
Sbjct: 79 SLVFNADYLGIFQRSFWLSLLTTLGCLALGFPTALYLALQPERRRNLLLFLVTVPFWTNL 138
Query: 106 VIVALGFIIIFGKSGPLG-----------GLGILYNWKAIILAHVFYNYPVVVRVIASSW 154
++ +I++ G + GLG+LY A+I+ ++ P +V I SS
Sbjct: 139 LVRVYAWILLLRNGGLVDAGLQGIGLTDTGLGLLYTDNAVIIGLLYTYLPFMVLPIYSSL 198
Query: 155 ERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKY 214
E+++ EAA LGA + R++ +PL +P I+ +L F S+ IP +LGG K
Sbjct: 199 EKMDWRLVEAAFDLGANRWKALRRVIVPLAMPGIVAGCILVFIPALGSYIIPELLGGGK- 257
Query: 215 ATIEVAIFSSAMMLLDFKTSS--------SLALIQLTISAILMY 250
A+ ++ L F T+ S AL+ + A+L+Y
Sbjct: 258 -----ALMIGNLIQLQFGTAHNWPFGAALSFALLAFVLLAMLIY 296
>sp|P45169|POTC_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTC
Length = 257
Score = 81.1 bits (197), Expect = 3e-14
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 10/247 (4%)
Query: 287 FIFVL-VFIISPLFAVIYKALMFN-DRLSLEWFRRAFSEE-YNPMFGTSSLM-TILNTLK 342
F+FV+ ++ P+ ++ + FN DR L W + FS Y +F +L+ ++++
Sbjct: 10 FMFVVYAYLYIPIIILVTNS--FNKDRYGLSW--KGFSWNWYERLFNNDTLIQAAIHSVT 65
Query: 343 FGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSL- 401
F A +A I+ A + R +FRGK + + + S +++ + L F +
Sbjct: 66 IAFFAATLATIVGGLTAIALYRYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMVVGIS 125
Query: 402 YGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNG 461
G W L+ LAH T P+ TI + +LEA+ LGASE K+ LPL +
Sbjct: 126 LGFWSLL-LAHVTFCLPYVTVTIFSRLNGFDSRMLEAAKDLGASEVTILRKIILPLALPA 184
Query: 462 ILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVS 521
++ + SF IS ++ + ++ L L I+ + + +AL+ +++++S+
Sbjct: 185 VVSGWLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEVNALATIMIVLSLAL 244
Query: 522 FLLIERI 528
+L + I
Sbjct: 245 VVLSQLI 251
Score = 77.6 bits (188), Expect = 3e-13
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 22/252 (8%)
Query: 20 MLLLLSLFYVPMVRVISLGFSLTSL---LSVLSDEYYRRVIAF-TFVQALL--------- 66
M ++ + Y+P++ +++ F+ S +Y R+ T +QA +
Sbjct: 11 MFVVYAYLYIPIIILVTNSFNKDRYGLSWKGFSWNWYERLFNNDTLIQAAIHSVTIAFFA 70
Query: 67 STLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG 126
+TLAT+ G+ ++ Y F GK+ + ++ + + P +++A+ + +F +G
Sbjct: 71 ATLATIVGGLTAIALY-RYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMV------VG 123
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I + +++LAHV + P V I S + EAA LGA + RKI LPL LP
Sbjct: 124 ISLGFWSLLLAHVTFCLPYVTVTIFSRLNGFDSRMLEAAKDLGASEVTILRKIILPLALP 183
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
+++ LL+FT + + G Y + + IFS + + ++LA I + +S
Sbjct: 184 AVVSGWLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEV-NALATIMIVLSL 242
Query: 247 ILMYIYAKLIER 258
L+ + ++LI R
Sbjct: 243 ALV-VLSQLITR 253
>sp|P95156|MODB_MYCTU MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|7442813|pir||B70666 probable transport system
permease for molybdate uptake - Mycobacterium
tuberculosis (strain H37RV) >gi|1781189|emb|CAB06129.1|
(Z83859) modB [Mycobacterium tuberculosis]
>gi|1907088|emb|CAA67643.1| (X99258) membrane-spanning
subunit of ABC-transport system [Mycobacterium
tuberculosis]
Length = 264
Score = 81.1 bits (197), Expect = 3e-14
Identities = 58/242 (23%), Positives = 112/242 (45%), Gaps = 10/242 (4%)
Query: 16 ILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVG 75
+ +P + + +P+V I++ ++++ + + + A ST+ + +G
Sbjct: 11 VYLPAIAGIVFVAMPLV-AIAIRVDWPRFWALITTPSSQTALLLSVKTAAASTVLCVLLG 69
Query: 76 IPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGILY 129
+P A V + R LR LI +P V+P V+ + + FG+ G +G G+ I +
Sbjct: 70 VPMALVLARSRGRLVRSLRPLILLPLVLPPVVGGIALLYAFGRLGLIGRYLEAAGISIAF 129
Query: 130 NWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSIL 189
+ A++LA F + P +V + + Y+ A +LGA+ V+ ++TLPLLLP ++
Sbjct: 130 STAAVVLAQTFVSLPYLVISLEGAARTAGADYEVVAATLGARPGTVWWRVTLPLLLPGVV 189
Query: 190 VASLLTFTFCFMSFSIPLILGGYKYA---TIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
S+L F F L G + T+ + I+ + D + SL L+ +
Sbjct: 190 SGSVLAFARSLGEFGATLTFAGSRQGVTRTLPLEIYLQRVTDPDAAVALSLLLVVVAALV 249
Query: 247 IL 248
+L
Sbjct: 250 VL 251
>pir||D69223 anion transport system permease protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622018|gb|AAB85419.1| (AE000867) anion transport
system permease protein [Methanobacterium
thermoautotrophicum]
Length = 269
Score = 81.1 bits (197), Expect = 3e-14
Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 9 LSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
+S+ +G ++ ++ F++ + + ++++S S+L +I + L ST
Sbjct: 6 VSIFRGTCRFFAVIFVAAFFIICISL----WTVSSPQSILDSFRSADMIHSVKLSLLTST 61
Query: 69 LATLAVGIPG---AYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG-- 123
+ TL V + AY S F GK +++++ +P +P +++ + +I G + PL
Sbjct: 62 ITTLIVMLSALLIAYSLSEDSFRGKSIVKTVLDIPIALPEILIGIMLLIFLGNT-PLNYM 120
Query: 124 ----GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKI 179
G+ I++ +I A F + P VR+ S++ I+ K + SLG F FR I
Sbjct: 121 MDGLGIQIVFTDLGVICAQFFVSLPYTVRICYSTFCNIDRRLKFVSRSLGYTEFETFRNI 180
Query: 180 TLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLA- 238
+PL IL A+++TF+ C F LI+ G Y + S + L ++A
Sbjct: 181 MIPLSRDGILAATIITFSRCIGCFGAVLIVAGGTYQKTDTLPISLYLNLSYGNVEMAVAS 240
Query: 239 -LIQLTISAILMYIYAKL 255
+ + IS I ++ K+
Sbjct: 241 GIFLMIISFITIFFLEKM 258
Score = 72.2 bits (174), Expect = 1e-11
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 299 FAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPL 358
FAVI+ A F +SL W + + + ++ +L I LI ++ AL +
Sbjct: 16 FAVIFVAAFFIICISL-WTVSSPQSILDSFRSADMIHSVKLSLLTSTITTLIVMLSALLI 74
Query: 359 ARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHW-----------LL 407
A ++ + FRGK +++ +P+A +++G+ L+ +T L L
Sbjct: 75 AYSLSEDSFRGKSIVKTVLDIPIALPEILIGIMLLIFLGNTPLNYMMDGLGIQIVFTDLG 134
Query: 408 IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASI 467
+ A V+ P+ R + I + L S +LG +E +F + +PL +GIL A+I
Sbjct: 135 VICAQFFVSLPYTVRICYSTFCNIDRRLKFVSRSLGYTEFETFRNIMIPLSRDGILAATI 194
Query: 468 FSFAISAAELATTYMLAS---PENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLL 524
+F+ ++A + TL +++Y +S A A + LMIIS ++
Sbjct: 195 ITFSRCIGCFGAVLIVAGGTYQKTDTLPISLYLNLSYGNVEMAVASGIFLMIISFITIFF 254
Query: 525 IERIG 529
+E++G
Sbjct: 255 LEKMG 259
>sp|P27367|CYST_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|280207|pir||C43670 integral membrane protein cysT -
Synechococcus sp >gi|154508|gb|AAA73044.1| (M65247)
integral membrane polypeptide of the sulfate permease
[Synechococcus PCC7942]
Length = 278
Score = 80.8 bits (196), Expect = 4e-14
Identities = 66/257 (25%), Positives = 116/257 (44%), Gaps = 21/257 (8%)
Query: 15 LILIPML-LLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
++ IP++ L L +P+ R+ L T ++V + E TF +L +
Sbjct: 30 ILFIPIIALFLKSASLPLGRIWELA---TQPVAVAAYEV-------TFGLSLAAAALNGV 79
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGI 127
G+ A+V + YDFPGK+ S I +PF +P+ + L ++ G +G G+ I
Sbjct: 80 FGVIIAWVLTRYDFPGKKLFDSFIDLPFALPTAVAGLTLATVYSDKGWIGQFIAPFGVQI 139
Query: 128 LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPS 187
+ ++LA VF + P VVR + + +EAA SLGA F ++ LP +LP
Sbjct: 140 AFTRWGVLLAMVFISLPFVVRTVEPLLLELEVEAEEAAASLGASPSETFWRVILPPILPG 199
Query: 188 ILVASLLTFTFCFMSFSIPLILGG---YKYATIEVAIFSSAMMLLDFKTSSSLALIQLTI 244
+L F+ F +I+ G + V IF + D+ ++ + + L
Sbjct: 200 VLAGVAQGFSRAVGEFGSVVIISGNLPFDDLIAPVLIF-ERLEQYDYAGATVIGSVLLLF 258
Query: 245 SAILMYIYAKLIERYSR 261
S +++++ L SR
Sbjct: 259 SLVILFVINALQNWSSR 275
>pir||F81344 probable ABC transport system permease Cj0731 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968188|emb|CAB73005.1| (AL139076) putative ABC
transport system permease [Campylobacter jejuni]
Length = 259
Score = 80.8 bits (196), Expect = 4e-14
Identities = 68/265 (25%), Positives = 122/265 (45%), Gaps = 20/265 (7%)
Query: 274 LKLDIEGIAILVYFIFVLVFIISPLFAVIYKAL-------MFNDRLSLEWFRRAFSEEYN 326
LK I A+L V +F+ PL A ++ + D L+L+W++ F +E
Sbjct: 7 LKAKIYHYAVL---FLVFLFLALPLMATFLYSISTSWGVSVLPDDLTLKWYQELFHDE-- 61
Query: 327 PMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSV 386
L+ + ++L ++L++VIL PL V+ + K + + +P A +
Sbjct: 62 -----RFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAFVNILIIMPFAVPPI 116
Query: 387 MLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKN-LLEASLTLGAS 445
+ +G L + D W+LI + T+A PF +R + +I + N L+ ++ LG S
Sbjct: 117 VSCVGLLQLYADNIGGTAWILI-FTYFTIALPFIYRALDNAISNVNLNELITSNAMLGGS 175
Query: 446 EALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFG 505
+ K+ LP + NGILVA SF+ E +L TL + +Y I ++
Sbjct: 176 LMGAIFKLILPNLRNGILVAVFLSFSFLIGEFLYANILVGSAYETLQVYLYN-IKNQSGH 234
Query: 506 PASALSVVLMIISMVSFLLIERIGE 530
+SAL +V ++ ++ + I E
Sbjct: 235 YSSALVIVYFVLIFITTFIASLIKE 259
>gb|AAC27497.1| (AF077856) PotC [Actinobacillus actinomycetemcomitans]
Length = 248
Score = 80.4 bits (195), Expect = 5e-14
Identities = 58/245 (23%), Positives = 116/245 (46%), Gaps = 7/245 (2%)
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEE-YNPMFGTSSLM-TILNTLKFGFIA 347
V ++ P+ ++ + +DR L W + FS Y +F +L+ ++++ F A
Sbjct: 4 VYAYLYIPIVILVTNSFN-SDRYGLSW--KGFSWNWYERLFNNDTLIQAAIHSVTIAFFA 60
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSL-YGHWL 406
+A I+ A + R +FRGK + + + S +++ + L F + G W
Sbjct: 61 ATLATIVGGLTAIALYRYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMVVGISLGFWS 120
Query: 407 LIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVAS 466
L+ LAH T P+ TI + +LEA+ LGASE K+ LPL + ++
Sbjct: 121 LL-LAHVTFCLPYVTVTIFSRLNGFDARMLEAAKDLGASEITILRKIILPLALPAVVSGW 179
Query: 467 IFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIE 526
+ SF IS ++ + ++ L L I+ + + +AL+ +++++S++ + +
Sbjct: 180 LLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEVNALATIMIVLSLLLVIASQ 239
Query: 527 RIGEE 531
IG++
Sbjct: 240 FIGKK 244
Score = 78.0 bits (189), Expect = 2e-13
Identities = 61/243 (25%), Positives = 115/243 (47%), Gaps = 21/243 (8%)
Query: 20 MLLLLSLFYVPMVRVISLGFSLTSL---LSVLSDEYYRRVIAF-TFVQALL--------- 66
M ++ + Y+P+V +++ F+ S +Y R+ T +QA +
Sbjct: 1 MFVVYAYLYIPIVILVTNSFNSDRYGLSWKGFSWNWYERLFNNDTLIQAAIHSVTIAFFA 60
Query: 67 STLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG 126
+TLAT+ G+ ++ Y F GK+ + ++ + + P +++A+ + +F +G
Sbjct: 61 ATLATIVGGLTAIALY-RYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMV------VG 113
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I + +++LAHV + P V I S + EAA LGA + RKI LPL LP
Sbjct: 114 ISLGFWSLLLAHVTFCLPYVTVTIFSRLNGFDARMLEAAKDLGASEITILRKIILPLALP 173
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
+++ LL+FT + + G Y + + IFS + + ++LA I + +S
Sbjct: 174 AVVSGWLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEV-NALATIMIVLSL 232
Query: 247 ILM 249
+L+
Sbjct: 233 LLV 235
>pir||A72786 probable transport system permease protein APE0270 - Aeropyrum
pernix (strain K1) >gi|5103666|dbj|BAA79187.1|
(AP000058) 233aa long hypothetical transport system
permease protein [Aeropyrum pernix]
Length = 233
Score = 80.4 bits (195), Expect = 5e-14
Identities = 55/226 (24%), Positives = 111/226 (48%), Gaps = 12/226 (5%)
Query: 44 LLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVM 103
L+ + +E +RR + + + +S++ + + AY + + R + L + +
Sbjct: 7 LIDLFLEERFRRSLVLSLGSSTISSVLAVTLATAPAYAMARQEGRLTRLISQLHLLLLSI 66
Query: 104 PSVIVALGFIIIFGKSGPLGG----LGILYNWKAIILAHVFYNYPVVVRVIASSWERINP 159
P V + +I+F + PL LG+ ++ KA+ILA + P+ V ++ + +
Sbjct: 67 PPVGLGTAALILFTRYPPLNSISETLGLFFSPKAVILAQLLVTTPIAVSMLTGVFSMVPR 126
Query: 160 HYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY---KYAT 216
+EAA + GA + +I LPL LP IL A +TF F L+L G + T
Sbjct: 127 ELEEAAEAYGAGRLQILIRIVLPLSLPGILSALAVTFFRALGEFGATLVLAGNIPGRTET 186
Query: 217 IEVAIFSSAMMLLDFKTSSSLALIQLTISAILM----YIYAKLIER 258
+ +A++ +A+ L D +T+S++ + L + + + +Y +L++R
Sbjct: 187 LPLALY-NAISLADVETASAIYTLVLAVGLVTLGVHTLLYTRLVKR 231
>dbj|BAB06848.1| (AP001517) sulfate ABC transporter (permease) [Bacillus halodurans]
Length = 287
Score = 80.4 bits (195), Expect = 5e-14
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 38/270 (14%)
Query: 274 LKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSS 333
+K+ + GIA+ F+ +F++ PL A+ Y RAF + F + S
Sbjct: 22 VKVTLIGIALS----FLFLFLVLPLIAIFY---------------RAFEQGLAVYFASIS 62
Query: 334 LMTILNTLKFGFIAVLIAV----ILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLG 389
L+ +K F+ VLI V + + A I + +FRGK LL F LP + S V+ G
Sbjct: 63 EPDALSAIKLTFLVVLITVPLNTLFGIAAAWAIGKFQFRGKNLLTTFIDLPFSVSPVIAG 122
Query: 390 LGYLLAFRDTSLYGHWLL------------IALAHATVAYPFAFRTISISIRKIKKNLLE 437
L ++L F ++G WLL I LA V PF R + ++ E
Sbjct: 123 LIFVLLFSSHGVFGPWLLDRGIQIIFSIPGIVLATMFVTVPFVARELIPVMQAQGTAQEE 182
Query: 438 ASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS---PENTTLTLA 494
ASLTLGAS + V LP + +L I A + E +++ T+ L
Sbjct: 183 ASLTLGASGWKTLWHVTLPNVKWALLYGVILCNARAIGEFGAVSVVSGHIRGLTNTMPLH 242
Query: 495 IYKFISSRQFGPASALSVVLMIISMVSFLL 524
I + QF A A++ ++ ++++ + ++
Sbjct: 243 IEILYNEYQFTAAFAVASLMSLLAIFTLIV 272
Score = 78.8 bits (191), Expect = 1e-13
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 13/250 (5%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
L L +L L+++FY + +++ F+ S LS I TF+ L++
Sbjct: 34 LFLFLVLPLIAIFYRAFEQGLAVYFASISEPDALS------AIKLTFLVVLITVPLNTLF 87
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGIL 128
GI A+ + F GK L + I +PF + VI L F+++F G G G+ I+
Sbjct: 88 GIAAAWAIGKFQFRGKNLLTTFIDLPFSVSPVIAGLIFVLLFSSHGVFGPWLLDRGIQII 147
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
++ I+LA +F P V R + + +EA+++LGA G+ +TLP + ++
Sbjct: 148 FSIPGIVLATMFVTVPFVARELIPVMQAQGTAQEEASLTLGASGWKTLWHVTLPNVKWAL 207
Query: 189 LVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL-TISAI 247
L +L F ++ G+ ++ +++ +++ A+ L ++ AI
Sbjct: 208 LYGVILCNARAIGEFGAVSVVSGHIRGLTNTMPLHIEILYNEYQFTAAFAVASLMSLLAI 267
Query: 248 LMYIYAKLIE 257
I +IE
Sbjct: 268 FTLIVKNIIE 277
>sp|P23859|POTC_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTC
>gi|96439|pir||C40840 spermidine/putrescine transport
system permease potC - Escherichia coli
>gi|147328|gb|AAC37040.1| (M64519) transport protein
[Escherichia coli] >gi|1651551|dbj|BAA35944.1| (D90747)
Spermidine/putrescine transport system permease protein
PotC. [Escherichia coli] >gi|1787368|gb|AAC74208.1|
(AE000212) spermidine/putrescine transport system
permease [Escherichia coli K12]
Length = 264
Score = 80.0 bits (194), Expect = 6e-14
Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 9/244 (3%)
Query: 16 ILIPMLLLL-SLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
+ IP+++L+ + F + GF+ +++++ + + A+ S +
Sbjct: 18 LYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLI 77
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAI 134
G A Y F GK F+ ++ V + P +++A+ +++F LGI + ++
Sbjct: 78 GSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFML------LGIQLGFWSL 131
Query: 135 ILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLL 194
+ +H+ + P VV + S + + EAA LGA F + RKI LPL +P++ +L
Sbjct: 132 LFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVL 191
Query: 195 TFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAK 254
+FT + + G Y + + I+S + + + ++LA I L +S ++M I ++
Sbjct: 192 SFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEV-NALATILLVLS-LVMVIASQ 249
Query: 255 LIER 258
LI R
Sbjct: 250 LIAR 253
Score = 74.9 bits (181), Expect = 2e-12
Identities = 52/245 (21%), Positives = 108/245 (43%), Gaps = 7/245 (2%)
Query: 290 VLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMF--GTSSLMTILNTLKFGFIA 347
+ ++ P+ +I + + R + W + F+ ++ + S L ++L +
Sbjct: 14 IYAYLYIPIIILIVNSFN-SSRFGINW--QGFTTKWYSLLMNNDSLLQAAQHSLTMAVFS 70
Query: 348 VLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY-GHWL 406
A ++ A + R +FRGK + + + S +++ + L+ F + G W
Sbjct: 71 ATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWS 130
Query: 407 LIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVAS 466
L+ +H T PF T+ ++ +LEA+ LGASE K+ LPL + +
Sbjct: 131 LL-FSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGW 189
Query: 467 IFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIE 526
+ SF +S ++ + + P L L IY + +AL+ +L+++S+V + +
Sbjct: 190 VLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQ 249
Query: 527 RIGEE 531
I +
Sbjct: 250 LIARD 254
>pir||I64117 spermidine/putrescine transport system permease potC - Haemophilus
influenzae (strain Rd KW20) >gi|1574804|gb|AAC22989.1|
(U32813) spermidine/putrescine ABC transporter, permease
protein (potC) [Haemophilus influenzae Rd]
Length = 247
Score = 80.0 bits (194), Expect = 6e-14
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 9/243 (3%)
Query: 290 VLVFIISPLFAVIYKALMFN-DRLSLEWFRRAFSEE-YNPMFGTSSLM-TILNTLKFGFI 346
V ++ P+ ++ + FN DR L W + FS Y +F +L+ ++++ F
Sbjct: 4 VYAYLYIPIIILVTNS--FNKDRYGLSW--KGFSWNWYERLFNNDTLIQAAIHSVTIAFF 59
Query: 347 AVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSL-YGHW 405
A +A I+ A + R +FRGK + + + S +++ + L F + G W
Sbjct: 60 AATLATIVGGLTAIALYRYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMVVGISLGFW 119
Query: 406 LLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVA 465
L+ LAH T P+ TI + +LEA+ LGASE K+ LPL + ++
Sbjct: 120 SLL-LAHVTFCLPYVTVTIFSRLNGFDSRMLEAAKDLGASEVTILRKIILPLALPAVVSG 178
Query: 466 SIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
+ SF IS ++ + ++ L L I+ + + +AL+ +++++S+ +L
Sbjct: 179 WLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEVNALATIMIVLSLALVVLS 238
Query: 526 ERI 528
+ I
Sbjct: 239 QLI 241
Score = 77.6 bits (188), Expect = 3e-13
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 22/252 (8%)
Query: 20 MLLLLSLFYVPMVRVISLGFSLTSL---LSVLSDEYYRRVIAF-TFVQALL--------- 66
M ++ + Y+P++ +++ F+ S +Y R+ T +QA +
Sbjct: 1 MFVVYAYLYIPIIILVTNSFNKDRYGLSWKGFSWNWYERLFNNDTLIQAAIHSVTIAFFA 60
Query: 67 STLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG 126
+TLAT+ G+ ++ Y F GK+ + ++ + + P +++A+ + +F +G
Sbjct: 61 ATLATIVGGLTAIALY-RYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMV------VG 113
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
I + +++LAHV + P V I S + EAA LGA + RKI LPL LP
Sbjct: 114 ISLGFWSLLLAHVTFCLPYVTVTIFSRLNGFDSRMLEAAKDLGASEVTILRKIILPLALP 173
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
+++ LL+FT + + G Y + + IFS + + ++LA I + +S
Sbjct: 174 AVVSGWLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEV-NALATIMIVLSL 232
Query: 247 ILMYIYAKLIER 258
L+ + ++LI R
Sbjct: 233 ALV-VLSQLITR 243
>pir||B72261 spermidine/putrescine ABC transporter, permease protein -
Thermotoga maritima (strain MSB8)
>gi|4981938|gb|AAD36447.1|AE001791_9 (AE001791)
spermidine/putrescine ABC transporter, permease protein
[Thermotoga maritima]
Length = 262
Score = 80.0 bits (194), Expect = 6e-14
Identities = 65/264 (24%), Positives = 125/264 (46%), Gaps = 23/264 (8%)
Query: 285 VYFIFVLVFIISPLFAV-IYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKF 343
VYF+++L I P+ V +Y L ++W + Y P + L I ++
Sbjct: 4 VYFLWLLFLFILPISIVFVYSFLEPQIYGGVKWSFSLEAYSYLPRY----LALIWRSVWI 59
Query: 344 GFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYG 403
+A LI +++A+P+A IAR K K L + +P ++S++ + + + L
Sbjct: 60 AGVATLITLVVAVPVAFYIARSKL--KNFLLLLTVVPFWTNSLIRIYAWKIVLGNNGLVN 117
Query: 404 HWL---------------LIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEAL 448
+L + L PFA + ++ K++ ++LEASL LGAS
Sbjct: 118 QFLGLFGIDPVQFLYNSFAVILVIVYTYLPFAILPLYAAMEKVEDSILEASLDLGASRMY 177
Query: 449 SFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYK-FISSRQFGPA 507
+F++V LP + G+L A +F F + A ++ + + I + ++ R + A
Sbjct: 178 TFIRVLLPNVRAGLLTAFVFVFIPALGSYAIPDLVGGVNSKMIGNEIVRQLLTVRNWPVA 237
Query: 508 SALSVVLMIISMVSFLLIERIGEE 531
SA+S +L +I+++S + + + GE+
Sbjct: 238 SAMSNILTLIALLSIIFVMKRGEK 261
Score = 74.1 bits (179), Expect = 4e-12
Identities = 70/251 (27%), Positives = 116/251 (45%), Gaps = 22/251 (8%)
Query: 21 LLLLSLFYVPMVRVISLGFSLTSL-------LSVLSDEYYRRVIAFTFVQ---ALLSTLA 70
L LL LF +P+ V F + S+ + Y R +A + A ++TL
Sbjct: 7 LWLLFLFILPISIVFVYSFLEPQIYGGVKWSFSLEAYSYLPRYLALIWRSVWIAGVATLI 66
Query: 71 TLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGP----LGGLG 126
TL V +P A+ + K FL L VPF S+I + I+ G +G LG G
Sbjct: 67 TLVVAVPVAFYIARSKL--KNFLLLLTVVPFWTNSLIRIYAWKIVLGNNGLVNQFLGLFG 124
Query: 127 I-----LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITL 181
I LYN A+IL V+ P + + ++ E++ EA++ LGA F ++ L
Sbjct: 125 IDPVQFLYNSFAVILVIVYTYLPFAILPLYAAMEKVEDSILEASLDLGASRMYTFIRVLL 184
Query: 182 PLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQ 241
P + +L A + F S++IP ++GG I I + + ++ +S+++ I
Sbjct: 185 PNVRAGLLTAFVFVFIPALGSYAIPDLVGGVNSKMIGNEIVRQLLTVRNWPVASAMSNI- 243
Query: 242 LTISAILMYIY 252
LT+ A+L I+
Sbjct: 244 LTLIALLSIIF 254
>pir||S31095 cysT protein - Synechocystis sp. (PCC 6803) (fragment)
>gi|49120|emb|CAA48111.1| (X67911) cysT [Synechocystis
sp.]
Length = 235
Score = 79.6 bits (193), Expect = 8e-14
Identities = 49/189 (25%), Positives = 90/189 (46%), Gaps = 6/189 (3%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
++ I LLL+ + + + V S L + + TF+ AL + L +
Sbjct: 28 VVTIIYLLLILVLPIAALLVKSASLGLEGFWQIATTPIAISTYNVTFITALAAGLVNGVM 87
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGIL 128
G A+V FPGK+ + +++ +PF +P+ + L ++ ++G +G G+ I
Sbjct: 88 GTLVAWVLVRCQFPGKKIVDAMVDLPFALPTSVAGLVLATLYSQTGWVGRFFAPFGIQIA 147
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
++ + +A VF + P +VR + + + +EAA SLGA F F ++ P L+P I
Sbjct: 148 FSRLGVFVAMVFISLPFIVRTLQPVLQELEEEAEEAAWSLGATEFQTFWRVIFPPLIPPI 207
Query: 189 LVASLLTFT 197
L L F+
Sbjct: 208 LTGIALGFS 216
>gb|AAK41295.1| Sulfate ABC transporter, permease protein [Sulfolobus solfataricus]
Length = 265
Score = 79.2 bits (192), Expect = 1e-13
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 24/255 (9%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
L+ +P L LL Y P V S+ FS +SLLS I +F + LS + T+ +
Sbjct: 21 LLALPTLYLLFYGYGPFF-VKSVAFS-SSLLSS---------IGLSFFASALSIVITVLI 69
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL----GIL-- 128
P AY S + P + +L+ VP +P +V + I I + PLG L GI+
Sbjct: 70 FTPLAYYLSRHRNP---IIETLVDVPASIPHPLVGIALIFIDSPTNPLGALLYSHGIIFY 126
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
Y + ++LA + + P+ +R + + +E + Y+ AMSLGA F VF + PL + I
Sbjct: 127 YTYTGLLLALIIVSSPIYIRSMQNFFESLPRSYEIYAMSLGASEFKVFTSVVFPLSIRGI 186
Query: 189 LVASLLTFTFCFMSFSIPLILGGYKYATI-EVAIFSSAMMLLDFKT---SSSLALIQLTI 244
+ A L + F +I+ Y + A +S + +++T +S A L +
Sbjct: 187 ISAGLTSIARAISEFGSVVIVAPYVTGWLFNNAYVASVYIYNEYETYFSASISASATLLL 246
Query: 245 SAILMYIYAKLIERY 259
++++ + ++++ +
Sbjct: 247 FSLILIVTSRIVNHF 261
>sp|P37731|MODC_AZOVI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODC
>gi|419535|pir||S31046 hypothetical protein 3 -
Azotobacter vinelandii
Length = 226
Score = 78.8 bits (191), Expect = 1e-13
Identities = 52/182 (28%), Positives = 90/182 (48%), Gaps = 10/182 (5%)
Query: 51 EYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVAL 110
E+ I T A L+T+ L VG P A+ + K + +++ +P V+P ++
Sbjct: 5 EHDLAAIRLTLELASLTTVLLLVVGTPIAWWLARTRSRLKGAIGAVVALPLVLPPTVLGF 64
Query: 111 GFIIIFGKSGPLG------GLGIL-YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKE 163
++ G GP+G GLG L + + +++A VFY+ P VV+ + +++E I E
Sbjct: 65 YLLVTMGPHGPIGQLTQFLGLGTLPFTFAGLVVASVFYSLPFVVQPLQNAFEAIGERPLE 124
Query: 164 AAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG---YKYATIEVA 220
A +L A + F + +PL P + A++L F F + L++GG K T+ V
Sbjct: 125 VASTLRAGPWDTFFTVVVPLARPGFITAAILGFAHTVGEFGVVLMIGGNIPEKTRTVAVQ 184
Query: 221 IF 222
IF
Sbjct: 185 IF 186
>pir||H83620 probable permease of ABC transporter PA0205 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946040|gb|AAG03594.1|AE004458_9 (AE004458) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 306
Score = 78.8 bits (191), Expect = 1e-13
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 64 ALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG 123
A L+TL TL++G P A + + L LITVPF +I +I++ SG +
Sbjct: 94 AALTTLITLSLGFPVAVWLAMQPPRRRGLLIFLITVPFWANLLIRTYAWILLLRGSGVIN 153
Query: 124 ----GLGI-------LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKG 172
GLG+ LY+ A++L V+ P VV I ++ E+++ EAA L A
Sbjct: 154 NGLLGLGLVDHPLPLLYSDGAVLLGLVYTYAPFVVLPIYATLEKMDMRLLEAAQDLYAGR 213
Query: 173 FVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFK 232
RK+ LP P IL ++LTF C + P +LGG + IF ++
Sbjct: 214 LRTLRKVVLPTARPGILAGAILTFVPCLGAMIAPELLGGGTRMMLGNLIFRQFADARNWP 273
Query: 233 TSSSLALIQLTISAILMYIYAKLIERYSR 261
++L+L+ + +++ +YA ER +R
Sbjct: 274 FGAALSLVLMAAVMLILTVYAWRAERLAR 302
>gb|AAG20068.1| (AE005086) spermidine/putrescine ABC transporter permease; PotC
[Halobacterium sp. NRC-1]
Length = 271
Score = 78.4 bits (190), Expect = 2e-13
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 23 LLSLFYVPMVRVISL-------------GFSLTSLLSVLSDEYYRRVIAFTFVQALLSTL 69
+L++ ++P+V +I L G +L + L D +A + A L+++
Sbjct: 22 VLAVLWLPLVVIIVLSVAENAATILPFTGVTLAHYQATLQDGALLGSVANSATIATLASV 81
Query: 70 ATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILY 129
AVG+P + YD P R + +P V+P V++ +G +I ++ P GI
Sbjct: 82 LATAVGVPASVALVRYDVPLSNAFRVAVVLPMVVPGVVLGIGVLISI-RTLP----GITP 136
Query: 130 NWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSIL 189
+ +L H Y P VV ++++ ++ +AA LGA V FR +TLP + P++
Sbjct: 137 GFVPTVLTHAVYGLPFVVLLVSARLAAVDDTLADAARDLGASPLVAFRDVTLPAIAPAVA 196
Query: 190 VASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILM 249
L + F F + G T +V + + LL + T+ L +I + +L
Sbjct: 197 SGFLFAWVRSFEEFVRAYFVSG----TTDV-LTTEMYALLAYGTAPKLNVIATLVLFVLA 251
Query: 250 YIYA 253
+ A
Sbjct: 252 VVLA 255
>pir||F75203 anion transport system permease protein PAB0102 - Pyrococcus abyssi
(strain Orsay) >gi|5457586|emb|CAB49077.1| (AJ248283)
ANION TRANSPORT SYSTEM PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 248
Score = 78.0 bits (189), Expect = 2e-13
Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAV 348
F++V+I P+ + K + FR ++P+ + + N+L
Sbjct: 17 FLIVYIALPIIVIFTKQALD--------FRMLVKTIHDPLV----IEALRNSLLTATATA 64
Query: 349 LIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLI 408
LI+++ +PL V+AR+ FRGK L++ +P+ ++G+ L+ F + L + +I
Sbjct: 65 LISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSYKGII 124
Query: 409 ALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIF 468
A A V+ PFA + + + L + TLGAS+ +F + LP+ + I +I
Sbjct: 125 A-AMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIM 183
Query: 469 SFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
++A +E+ ++A T L + ++ ++ + +SV+LM IS+ F+++
Sbjct: 184 AWARGISEVGAILIVAYYPKTAQVL-VMEYFNNYGLRASRPISVILMGISLGIFVVL 239
Score = 71.4 bits (172), Expect = 2e-11
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 44 LLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVM 103
L+ + D + + + A + L +L G+P YV + DF GK ++++I VP V+
Sbjct: 40 LVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVI 99
Query: 104 PSVIVALGFIIIFGKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKE 163
P +V + ++ F + IL ++K II A +F + P + + ++ +
Sbjct: 100 PHSVVGIMLLVTFSNA-------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEH 152
Query: 164 AAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY-KYATIEV-AI 221
A +LGA F I+LP+ LPSI +++ + LI+ Y K A + V
Sbjct: 153 VARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEY 212
Query: 222 FSSAMMLLDFKTSSSLALIQLTISAILMYIYAK 254
F++ + S L I L I +L ++ K
Sbjct: 213 FNNYGLRASRPISVILMGISLGIFVVLRWLIGK 245
>gi|11499199 spermidine/putrescine ABC transporter, permease protein (potB)
[Archaeoglobus fulgidus] >gi|7446691|pir||F69450
spermidine/putrescine ABC transporter, permease protein
(potB) homolog - Archaeoglobus fulgidus
>gi|2648952|gb|AAB89641.1| (AE000991)
spermidine/putrescine ABC transporter, permease protein
(potB) [Archaeoglobus fulgidus]
Length = 248
Score = 77.6 bits (188), Expect = 3e-13
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 15/256 (5%)
Query: 13 KGLILIPMLLLLSLFYVPMVRVISLGF-----SLTSLLSVLSDEYYRRVIAFTFVQALLS 67
K L L ++ LL+ FY+P VI F +L VL+ Y ++ + A L+
Sbjct: 2 KKLSLPSIIFLLAFFYIPFAIVILYAFGYPEFTLKHFRDVLNPLYASYILNSAII-AFLT 60
Query: 68 TLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGI 127
T LA+ P AY + K L + +PF + ++ + I K LGI
Sbjct: 61 TAICLAIAYPVAYYIALKAGKWKNALLIAVILPFWISFLLRTYALMTILSK------LGI 114
Query: 128 LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPS 187
++ + A+++ V+ P ++ + ++ ER+N EA+ LGA F K+ +PL
Sbjct: 115 MFTFTAVMVGMVYDYLPFMILPLYTAMERMNVSTIEASYVLGADPIKTFLKVVMPLSRQG 174
Query: 188 ILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAI 247
++ L F F +P +LGG +T+ + + ++ S+L++I L A+
Sbjct: 175 MIAGIFLVFVPALGEFVVPAMLGGVSASTLGTLTWELFIRYHNWWKGSALSVIYL---AV 231
Query: 248 LMYIYAKLIERYSREE 263
+ A I+R R E
Sbjct: 232 VFAFTAYYIKRAGRLE 247
>pir||H71236 probable transport system protein - Pyrococcus horikoshii
>gi|3256540|dbj|BAA29223.1| (AP000001) 248aa long
hypothetical transport system protein [Pyrococcus
horikoshii]
Length = 248
Score = 77.6 bits (188), Expect = 3e-13
Identities = 59/238 (24%), Positives = 108/238 (44%), Gaps = 10/238 (4%)
Query: 23 LLSLFYVPMVRVISL-GFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYV 81
L+ +P+V + + L+ + D + + + A + L +L G+P Y+
Sbjct: 18 LVVYIVLPIVTIFAKQALDFEMLVKTVHDPLVLEALRNSLLTATATALISLFFGVPLGYI 77
Query: 82 FSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAIILAHVFY 141
+ DF GK F++++I VP V+P +V + ++ F + IL ++K II A +F
Sbjct: 78 LARKDFRGKNFVQAIIDVPVVIPHSVVGIMLLVTFSNA-------ILDSYKGIIAAMLFV 130
Query: 142 NYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFM 201
+ P + + ++ + A +LGA F I+LP+ LPSI ++ +
Sbjct: 131 SAPFAINSARDGFLAVDEKLEHVARTLGASRIRTFFSISLPMALPSIASGGIMAWARSMS 190
Query: 202 SFSIPLILGGY-KYATIEV-AIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIE 257
LI+ Y K A I V F++ + S L LI L+I L ++ ++ E
Sbjct: 191 EVGAILIVAYYPKTAQILVMEYFNNYGLRASRPISVMLMLISLSIFVFLRWLIGRVRE 248
Score = 76.9 bits (186), Expect = 5e-13
Identities = 56/237 (23%), Positives = 112/237 (46%), Gaps = 14/237 (5%)
Query: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAV 348
F++V+I+ P+ + K + F ++P+ L + N+L
Sbjct: 17 FLVVYIVLPIVTIFAKQALD--------FEMLVKTVHDPLV----LEALRNSLLTATATA 64
Query: 349 LIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLI 408
LI++ +PL ++AR+ FRGK ++ +P+ ++G+ L+ F + L + +I
Sbjct: 65 LISLFFGVPLGYILARKDFRGKNFVQAIIDVPVVIPHSVVGIMLLVTFSNAILDSYKGII 124
Query: 409 ALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIF 468
A A V+ PFA + + + L + TLGAS +F + LP+ + I I
Sbjct: 125 A-AMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASRIRTFFSISLPMALPSIASGGIM 183
Query: 469 SFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
++A S +E+ ++A T L + ++ ++ + +SV+LM+IS+ F+ +
Sbjct: 184 AWARSMSEVGAILIVAYYPKTAQIL-VMEYFNNYGLRASRPISVMLMLISLSIFVFL 239
>sp|P45170|POTB_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTB
>gi|1075319|pir||A64118 spermidine/putrescine transport
system permease potB - Haemophilus influenzae (strain Rd
KW20) >gi|1574805|gb|AAC22990.1| (U32813)
spermidine/putrescine ABC transporter, permease protein
(potB) [Haemophilus influenzae Rd]
Length = 286
Score = 77.3 bits (187), Expect = 4e-13
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 12/261 (4%)
Query: 16 ILIPMLLLLSLFYVPMVRVISLGFSLT-SLLSVLSDEYYRRVIAFTFVQALLSTLATLAV 74
+LIP LL+L++ ++ F +T + L + Y +V+ + + ++T+ L +
Sbjct: 24 VLIPNLLVLAVSFLTRDGSNFYAFPITIENYTNLFNPLYAQVVWNSLSMSGIATIICLLI 83
Query: 75 GIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL--------- 125
G P A++ S + L L+ +PF S+I G + G G L +
Sbjct: 84 GYPFAFMMSKIHPKYRPLLLFLVVLPFWTNSLIRIYGMKVFLGVKGILNTMLIDMGILSA 143
Query: 126 --GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPL 183
IL A+I+ V+ P ++ + S+ E+++ EAA LGA F F ++ LPL
Sbjct: 144 PIRILNTEIAVIIGLVYLLLPFMILPLYSAIEKLDNRLLEAARDLGANTFQRFFRVILPL 203
Query: 184 LLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLT 243
+P I+ LL F + +LGG K + I S ++ ++ S++++
Sbjct: 204 TMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVIKSEFLISRNWPFGSAVSIGLTV 263
Query: 244 ISAILMYIYAKLIERYSREEE 264
+ A+L+++Y + + +R+ E
Sbjct: 264 LMALLIFVYYRANKLLNRKVE 284
>gb|AAC27496.1| (AF077856) PotB [Actinobacillus actinomycetemcomitans]
Length = 286
Score = 77.3 bits (187), Expect = 4e-13
Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 16 ILIPMLLLLSLFYVPM--VRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
+LIP LL+L + ++ +L F+ + ++ L + Y +V+ + ++++ + L
Sbjct: 24 VLIPNLLVLVVSFLTRDGSNFYTLPFNFENYIN-LFNPLYAQVVWNSLYMSIIAAIICLL 82
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL-------- 125
+G P A++ S + L L+ +PF S+I G + G G L +
Sbjct: 83 IGYPFAFMVSKIHPKYRPLLLFLVVLPFWTNSLIRIYGMKVFLGVKGVLNTMLLEMGILS 142
Query: 126 ---GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
IL A+I+ V+ P ++ + S+ E+++ EAA LGA F F ++ LP
Sbjct: 143 EPIRILNTEVAVIIGLVYLLLPFMILPLYSAIEKLDGRLLEAAKDLGANAFQRFFRVILP 202
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
L +P I+ LL F + +LGG K + I S ++ ++ S++++
Sbjct: 203 LTMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVIKSEFLISRNWAFGSAISIGLT 262
Query: 243 TISAILMYIYAKLIERYSREEE 264
+ A+L+++Y + + +++ E
Sbjct: 263 ILMALLIFVYYRANKLLNKKVE 284
>sp|P18795|NIFC_CLOPA PROBABLE TRANSPORT SYSTEM PERMEASE PROTEIN NIFC
>gi|98607|pir||A35608 nifC protein - Clostridium
pasteurianum >gi|144869|gb|AAA23264.1| (M34365)
nitrogenase C (nifC) [Clostridium pasteurianum]
Length = 286
Score = 76.9 bits (186), Expect = 5e-13
Identities = 60/251 (23%), Positives = 118/251 (46%), Gaps = 18/251 (7%)
Query: 16 ILIPMLLLLSLFYV-----PMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLA 70
IL P+ L L+ Y P++ +I + ++ L D+ + I +FV +L++ +
Sbjct: 30 ILAPLFLALTAIYFVMLIFPIISMIRYSGG-SHIIQTLYDQDNIKTIILSFVTSLIALIF 88
Query: 71 TLAVGIPGAYVFSHY-DFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------ 123
T +G P A+ + + + L + +P V+P + + ++ FGK+G +G
Sbjct: 89 TFIIGTPTAFCINFVRNKVLSKILDIFVEIPVVLPPAVAGIALLLAFGKNGVVGNFLSNH 148
Query: 124 GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPL 183
G+ +++ A+I+A F + + VRV+ S + + E + LGA KI +P+
Sbjct: 149 GINVIFTSTAVIIAQFFVSSALYVRVLRDSVKSVPIELFEVSYVLGAGKIETIIKIMIPM 208
Query: 184 LLPSILVASLLTFTFCFMSFSIPLILGGY---KYATIEVAIFSSAMMLLDFKTSSSLALI 240
L SI+ +L + F L+ G K TI + I++ M D K +++ A I
Sbjct: 209 LKKSIVSGLILAWIRSLGEFGATLMFAGNIIGKTRTIPLQIYT--YMQDDIKMATAFATI 266
Query: 241 QLTISAILMYI 251
++ +L+ +
Sbjct: 267 LYIMTFVLLLL 277
Score = 70.6 bits (170), Expect = 4e-11
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 21/281 (7%)
Query: 262 EEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAF 321
E +++L + K+L +G + + +L + L A+ + L+F + +
Sbjct: 2 ENNKKILESSKKLSSYGDGESRFSFLEKILAPLFLALTAIYFVMLIFPIISMIRY--SGG 59
Query: 322 SEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVI--AREKFRGKGLLEVFATL 379
S ++ ++ TI+ + IA++ I+ P A I R K K +L++F +
Sbjct: 60 SHIIQTLYDQDNIKTIILSFVTSLIALIFTFIIGTPTAFCINFVRNKVLSK-ILDIFVEI 118
Query: 380 PLASSSVMLGLGYLLAFRDTSLYGHWL------------LIALAHATVAYPFAFRTISIS 427
P+ + G+ LLAF + G++L + +A V+ R + S
Sbjct: 119 PVVLPPAVAGIALLLAFGKNGVVGNFLSNHGINVIFTSTAVIIAQFFVSSALYVRVLRDS 178
Query: 428 IRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS-- 485
++ + L E S LGA + + +K+ +P++ I+ I ++ S E T M A
Sbjct: 179 VKSVPIELFEVSYVLGAGKIETIIKIMIPMLKKSIVSGLILAWIRSLGEFGATLMFAGNI 238
Query: 486 -PENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
+ T+ L IY ++ A+A + +L I++ V LL+
Sbjct: 239 IGKTRTIPLQIYTYMQD-DIKMATAFATILYIMTFVLLLLV 278
>pir||S76051 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001407|dbj|BAA10029.1| (D63999) iron utilization
protein [Synechocystis sp.]
Length = 557
Score = 76.9 bits (186), Expect = 5e-13
Identities = 116/555 (20%), Positives = 223/555 (39%), Gaps = 75/555 (13%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFS-----LTSLLSVLSDEYYRRVIAFTFVQALLSTLAT 71
++ LL+ VP++ V FS + L + + EY R +A L
Sbjct: 20 VLTSLLIAVWIAVPVIFVFLGIFSWQGEIFSHLWATVLGEYIRNSLALM----LGVGAGV 75
Query: 72 LAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL-GILYN 130
+G+ A++ + FPG R+L + +P P+ ++A G+ + GP+ L ++
Sbjct: 76 FVLGVGTAWLVTMCRFPGCRWLEWALLLPLSAPAYLLAYGYSNLLDFYGPVQTLLRSIFG 135
Query: 131 WKAI----------------ILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFV 174
W++ ILA V Y Y ++ IA + + EA+ SLG +
Sbjct: 136 WQSAPEYWFPQIRSLWGAIAILALVSYPYVYLLARIAFLEQGVCT--LEASRSLGCNPWQ 193
Query: 175 VFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTS 234
F ++ LPL P+I L F G + T I+S+ + + +
Sbjct: 194 SFSRVALPLARPAIAAGLALVMMETLNDFGTVQYFGVNTFTT---GIYSTWFGFGERQGA 250
Query: 235 SSLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLD------IEGIAILVY-- 286
+ LA + +L+ ++ER+SR + + + L + I L +
Sbjct: 251 TQLAAFLMIFVFLLV-----VLERWSRRQAKFYQSSSPHQNLPRYQLRGLRAIGALAFCL 305
Query: 287 FIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFI 346
F F+L F+I P ++Y + + + N F +S IL+ L
Sbjct: 306 FPFLLGFLI-PASYLLYLTVSYAQEV-----------RNNNFFQLASHSLILSFLT---A 350
Query: 347 AVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHW- 405
A+ + + L L + ++R+ + + S + +G+ D L W
Sbjct: 351 AIALVIGLILVYGQRLSRQPLTSFAVKVASMGYAIPGSVIAVGVLIPAGNFDNWLADWWE 410
Query: 406 --------LLIALAHATVAYPFAFRTISI-------SIRKIKKNLLEASLTLGASEALSF 450
LL++ A + Y + R +++ S+ KIK L +A+ +LG S +
Sbjct: 411 NMWGVKIGLLLSGTIAILVYAYLVRFLAVALGSLEGSLGKIKPTLDDAARSLGKSPSQIL 470
Query: 451 LKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASAL 510
+V PL+ G+L A + F EL T ++ TL + +Y++ S + A+A
Sbjct: 471 WQVHTPLMTGGLLTAVMLVFVDVMKELPATLVIRPFNFDTLAIRVYQYASDERLIEAAAP 530
Query: 511 SVVLMIISMVSFLLI 525
++ +++ M+ + +
Sbjct: 531 ALTIILAGMLPVIFL 545
>gi|10955067 agtD [Agrobacterium tumefaciens]
>gi|6689867|gb|AAF23880.1|AF117204_5 (AF242881) agtD
[Agrobacterium tumefaciens]
Length = 281
Score = 76.9 bits (186), Expect = 5e-13
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 32/251 (12%)
Query: 16 ILIPMLLLLSLFYVPMVRVI--SLGFSLTSLLSVLSDEYY--------RRVIAFTFVQAL 65
IL+P+L+L + + +I G+SL ++L + R +A + L
Sbjct: 22 ILLPLLILFPVSFSSADVLIFPPPGYSLRWFETILGSPEWMGAALTSLRIGVATCALSLL 81
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL 125
L+TLA + G G ++F + L +++ P +P+V+ ALG + F K +
Sbjct: 82 LATLAVIGFG-RGRFLF-------REALEAVVQFPLSVPAVVFALGAYLTFSK------V 127
Query: 126 GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLL 185
G++ I++AH +PVV V ++++ I+P AA SLGA + FR I PLLL
Sbjct: 128 GLVDTEAGIVIAHTVLIFPVVFLVASATYSSIDPSLSLAASSLGANAWQTFRTIVFPLLL 187
Query: 186 PSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTIS 245
P + + LL F + L T+ ++ + F TS A +S
Sbjct: 188 PGVAIGGLLAMLLSFDESVASIFLSDLSVKTLPRKLWEG----IRFNTSPESA----AVS 239
Query: 246 AILMYIYAKLI 256
A+L+ + +I
Sbjct: 240 ALLLGVTCTVI 250
>pir||E81179 spermidine/putrescine ABC transporter, permease protein NMB0612
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225842|gb|AAF41039.1| (AE002416)
spermidine/putrescine ABC transporter, permease protein
[Neisseria meningitidis MC58]
Length = 295
Score = 76.5 bits (185), Expect = 7e-13
Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 21/280 (7%)
Query: 20 MLLLLSLFYVPMVRVISLGFSLTSLLSV---LSDEYYRRVIAFTFVQ---------ALLS 67
+ L L+ Y+P+V ++ F+ + L++V S ++Y ++ + A++S
Sbjct: 14 LALSLAFLYIPLVVLVIYSFNESKLVTVWGGFSTKWYGALLENDTILEAAWLSLRIAVVS 73
Query: 68 TLATLAVGIPGAYVFSHYD-FPGKRFLRSLITVPFVMPSVIVALGFIIIFGK-------S 119
+LA + +G Y + F G +I+ P VMP VI L +++ + S
Sbjct: 74 SLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSMLLLIIQVQIFLQGS 133
Query: 120 GPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKI 179
L L + I L H + VI S ++ +EAAM LGA+ +F I
Sbjct: 134 EWLQHLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAMDLGARPLKIFFVI 193
Query: 180 TLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLAL 239
TLPL+ P+I LL T I L G +T+ IFS + LD + LA
Sbjct: 194 TLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIKLGLD-PQMNVLAT 252
Query: 240 IQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIE 279
I + I L+ I + R + + ++ A ++ KL E
Sbjct: 253 ILIGIIGTLVIIVNYWMMRQATKRDREAAEAYRQEKLAAE 292
>pir||D70952 probable sugar - Mycobacterium tuberculosis (strain H37RV)
>gi|2695823|emb|CAA15893.1| (AL021006) sugB
[Mycobacterium tuberculosis]
Length = 274
Score = 76.1 bits (184), Expect = 9e-13
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 337 ILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAF 396
++N++ G I +IAV+L A +AR +F GK LL A L S+ L
Sbjct: 66 LINSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIE 125
Query: 397 RDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELP 456
R L+ W + L + T A P A T+S R+I +L +A+ GA+ +F KV +P
Sbjct: 126 RAIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVP 185
Query: 457 LIVNGILVASIFSFAISAAELATTYML-ASPENTTLTLAIYKFISSRQF----GPASALS 511
L G++ A+I F + +L L A+ T +AI F S QF G +A +
Sbjct: 186 LAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPTGSIAAGA 245
Query: 512 VVLMIISMVSFLLIER 527
+V+ I +V L+ +R
Sbjct: 246 IVITIPIIVFVLIFQR 261
Score = 69.9 bits (168), Expect = 7e-11
Identities = 54/246 (21%), Positives = 106/246 (42%), Gaps = 14/246 (5%)
Query: 14 GLILIPMLLLLSLFYVPMVRV-----ISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLST 68
G L+P+L + SL P V I + + + + + + + L++T
Sbjct: 18 GYALLPVLWIFSLSLKPTSTVKDGKLIPSTVTFDNYRGIFRGDLFSSALINSIGIGLITT 77
Query: 69 LATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGIL 128
+ + +G AY + +FPGKR L + + PS+ + I +G+
Sbjct: 78 VIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIER------AIGLF 131
Query: 129 YNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSI 188
W +IL ++ + P+ + +++ + I ++AA GA FRK+ +PL P +
Sbjct: 132 DTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPLAAPGL 191
Query: 189 LVASLLTFTFCFMSFSIPLILGGYK---YATIEVAIFSSAMMLLDFKTSSSLALIQLTIS 245
+ A++L F F + + L L K A + +A F+ + + S + I +TI
Sbjct: 192 VTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPTGSIAAGAIVITIP 251
Query: 246 AILMYI 251
I+ +
Sbjct: 252 IIVFVL 257
>dbj|BAA36746.1| (AB016764) potB [Escherichia coli]
Length = 274
Score = 76.1 bits (184), Expect = 9e-13
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 14/263 (5%)
Query: 16 ILIPMLLLLSLFYVPM--VRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
+ +P L+++ ++ + + F+L + +L D Y V+ + AL++TLA L
Sbjct: 13 VFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLL-DPLYFEVLLHSLNMALIATLACLV 71
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG--------- 124
+G P A+ + + L L+ VPF S+I G I G L
Sbjct: 72 LGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVID 131
Query: 125 --LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
+ I++ A+I+ V+ P +V + SS E+++ EAA LGA F +I +P
Sbjct: 132 TPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIP 191
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
L +P I+ LL F + ++GG K I I + + D+ ++ ++
Sbjct: 192 LTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLT 251
Query: 243 TISAILMYIYAKLIERYSREEEQ 265
+ +++ +Y + ++++++
Sbjct: 252 IVMGLMLLVYWRASRLLNKKQQK 274
>pir||A81927 probable polyamine permease inner membrane protein NMA0818
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379537|emb|CAB84100.1| (AL162754) putative
polyamine permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 295
Score = 76.1 bits (184), Expect = 9e-13
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 21/280 (7%)
Query: 20 MLLLLSLFYVPMVRVISLGFSLTSLLSV---LSDEYYRRVIAFTFVQ---------ALLS 67
+ L L+ Y+P+V ++ F+ + L++V S +Y ++ + A++S
Sbjct: 14 LALSLAFLYIPLVVLVVYSFNESKLVTVWGGFSTRWYGALLENDTILEAAWLSLRIAVVS 73
Query: 68 TLATLAVGIPGAYVFSHYD-FPGKRFLRSLITVPFVMPSVIVALGFIIIFGK-------S 119
+LA + +G Y + F G +I+ P VMP VI L +++ + S
Sbjct: 74 SLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSMLLLIIQVQIFLQGS 133
Query: 120 GPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKI 179
L L + I L H + VI S ++ +EAAM LGA+ +F I
Sbjct: 134 EWLQHLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAMDLGARPLKIFFVI 193
Query: 180 TLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLAL 239
TLPL+ P+I LL T I L G +T+ IFS + LD + LA
Sbjct: 194 TLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIKLGLD-PQMNVLAT 252
Query: 240 IQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIE 279
I + I L+ I + R + + ++ A ++ KL E
Sbjct: 253 ILIGIIGTLVIIVNYWMMRQATKRDREAAEAYRQEKLAAE 292
>gi|10955063 motC [Agrobacterium tumefaciens] >gi|1381802|gb|AAC18649.1|
(AF242881) motC [Agrobacterium tumefaciens]
Length = 294
Score = 75.7 bits (183), Expect = 1e-12
Identities = 52/251 (20%), Positives = 112/251 (43%), Gaps = 13/251 (5%)
Query: 14 GLILIPMLLLLSLFYVPMVRVISLG--FSLTSLLSVLSDEYYRRVIAFTFVQALLSTLAT 71
G+I++ + L+L L + + I FS + + + Y R+ TF+ A+L+T
Sbjct: 32 GMIVLVIALVLPLGVMTYLSFIGEDGTFSFENYTRIWESDIYGRIFGVTFLVAVLTTAIV 91
Query: 72 LAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG------- 124
+ +G P AY+ S + +P P ++ ++ + G +
Sbjct: 92 VFIGYPLAYLLSQLPAKIAGIAMLGVLMPLWTPVLVRTYAWLALLQGQGIINNTLIHLGA 151
Query: 125 ----LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
L + N ++ V P ++ + S + ++P+ AA +LGA+ F +
Sbjct: 152 ISQPLPLANNLTGTLIGMVQVMLPFLILPLYGSMKAVDPNLMCAASNLGARPSRAFWDVF 211
Query: 181 LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALI 240
PL LP +L +L+ F C + P +LGG + + + I ++ + + +S+L ++
Sbjct: 212 FPLSLPGLLSGALMVFVLCLGFYVTPAVLGGGRVIMVAMRIDANVRIYSSWGAASALGVV 271
Query: 241 QLTISAILMYI 251
+ ++A+L+ +
Sbjct: 272 LIVVTAVLLLV 282
>pir||B64579 molybdenum ABC transporter, permease protein - Helicobacter pylori
(strain 26695) >gi|2313585|gb|AAD07542.1| (AE000562)
molybdenum ABC transporter, permease protein (modB)
[Helicobacter pylori 26695]
Length = 224
Score = 75.7 bits (183), Expect = 1e-12
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 50 DEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVA 109
D + + +F AL++TL L VGI Y S +L+ +P V+P ++
Sbjct: 2 DHEFLITMRLSFSLALITTLILLPVGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLG 61
Query: 110 LGFIIIFGKSGPLGG-------LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYK 162
++IF S LG + ++++++ +IL V ++ P +V I S+ + K
Sbjct: 62 FYLLLIFSPSSFLGAFLQDVLNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPASLK 121
Query: 163 EAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG---YKYATIEV 219
EA+ SLG + + LP + PS+L+A + TFT F + ++LGG + +
Sbjct: 122 EASYSLGKGEYYTLFFVLLPNIKPSLLMAIITTFTHTIGEFGVVMMLGGDILGETRVASI 181
Query: 220 AIFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYS 260
AIF+ A L++ + AL IS L+++ L ++ S
Sbjct: 182 AIFNEA-EALNYSKAHQYALTLTLISFSLLFVTLFLNKKQS 221
>pir||G82932 spermidine/putrescine transport system permease UU109 [imported] -
Ureaplasma urealyticum
>gi|6899065|gb|AAF30515.1|AE002111_4 (AE002111)
spermidine/putrescine transport system permease
[Ureaplasma urealyticum]
Length = 284
Score = 75.7 bits (183), Expect = 1e-12
Identities = 58/251 (23%), Positives = 115/251 (45%), Gaps = 18/251 (7%)
Query: 22 LLLSLFYVPMVRVISLGFSLTSLLSVLSDEY-------YRRVIAFTFVQALLSTLATLAV 74
++L++ Y+P++ ++ L F+ S+ ++ + Y + F AL++T+ +
Sbjct: 17 IILAIIYIPLIIIVLLSFTTPSIKGNITSAFNWNDGSNYLTLTTNQFTDALINTIIISVI 76
Query: 75 GIPGAYVFSHYDFPG----KRFLRSLITVP----FVMPSVIVALGFIIIFGKSGPLGGLG 126
+P + + + G K F + L+T ++P VI + ++F + +G
Sbjct: 77 AVPISTIIATITCFGVWHAKIFYKKLMTASSQTNIMIPDVISGISLSLLFAAT--FIPIG 134
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
+ + IILAH+ P + +I ++ + A+ LG F +I LP LLP
Sbjct: 135 FSFGFGTIILAHISSCTPYAIMIIYPRMLKMKKNLILASYDLGYTKIATFFRIILPYLLP 194
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
SI+ A+++ F F F I ++GG K TI ++S A + + ++ LTI
Sbjct: 195 SIISATIIVFAMSFDDFIITKLVGG-KVNTIGTEMYSMAKGIKAWAVCFGALMVLLTILI 253
Query: 247 ILMYIYAKLIE 257
+ K+I+
Sbjct: 254 AALISANKIIK 264
>sp|P23860|POTB_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTB
>gi|96438|pir||B40840 spermidine/putrescine transport
system permease potB [validated] - Escherichia coli
>gi|147327|gb|AAC37039.1| (M64519) transport protein
[Escherichia coli] >gi|1651552|dbj|BAA35945.1| (D90747)
Spermidine/putrescine transport system permease protein
PotB. [Escherichia coli] >gi|1787369|gb|AAC74209.1|
(AE000212) spermidine/putrescine transport system
permease [Escherichia coli K12]
Length = 275
Score = 75.3 bits (182), Expect = 2e-12
Identities = 59/250 (23%), Positives = 111/250 (43%), Gaps = 14/250 (5%)
Query: 16 ILIPMLLLLSLFYVPM--VRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
+ +P L+++ ++ + + F+L + +L D Y V+ + AL++TLA L
Sbjct: 13 VFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLL-DPLYFEVLLHSLNMALIATLACLV 71
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG--------- 124
+G P A+ + + L L+ VPF S+I G I G L
Sbjct: 72 LGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVID 131
Query: 125 --LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
+ I++ A+I+ V+ P +V + SS E+++ EAA LGA F +I +P
Sbjct: 132 TPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIP 191
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
L +P I+ LL F + ++GG K I I + + D+ ++ ++
Sbjct: 192 LTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLT 251
Query: 243 TISAILMYIY 252
+ +++ +Y
Sbjct: 252 IVMGLMLLVY 261
>pir||H83607 polyamine transport protein PotH PA0303 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946148|gb|AAG03692.1|AE004468_4 (AE004468)
polyamine transport protein PotH [Pseudomonas
aeruginosa]
Length = 293
Score = 75.3 bits (182), Expect = 2e-12
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 14/259 (5%)
Query: 7 INLSMRKGLILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALL 66
+ +S+ + + IP + + ++V+ +L + L + D Y + A +
Sbjct: 28 LKISLAEADVAIPPYTEIFAYADQQLQVL---LNLGNYLMLTDDPLYIDAYLGSLKMAFI 84
Query: 67 STLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG--- 123
STL L VG P AY + + L LI +P +I ++ I +G L
Sbjct: 85 STLICLLVGYPMAYAIARSSQSSQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNSVL 144
Query: 124 -GLGIL------YNWKAIILAHVFYNY-PVVVRVIASSWERINPHYKEAAMSLGAKGFVV 175
GLG++ N + + Y+Y P ++ + ++ + +P EAA LGA+ F
Sbjct: 145 MGLGLISEPLTILNTNIAVYIGIVYSYLPFMILPLYANLVKHDPSLLEAASDLGARNFTS 204
Query: 176 FRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSS 235
F KIT+PL I+ +L F F IP +LGG + I ++ D+ +S
Sbjct: 205 FWKITVPLSKNGIIAGCMLVFIPAVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVAS 264
Query: 236 SLALIQLTISAILMYIYAK 254
+LA++ L I I + ++ K
Sbjct: 265 ALAVVMLAILIIPIILFNK 283
Score = 73.7 bits (178), Expect = 5e-12
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 285 VYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPM-----FGTSSLMT--- 336
V F+++ +F + P FA++ K + +++ + F+ + G ++T
Sbjct: 11 VPFLWLFLFFLLP-FAIVLKISLAEADVAIPPYTEIFAYADQQLQVLLNLGNYLMLTDDP 69
Query: 337 -----ILNTLKFGFIAVLIAVILALPLARVIAREKFRGKG--------------LLEVFA 377
L +LK FI+ LI +++ P+A IAR + L+ V+A
Sbjct: 70 LYIDAYLGSLKMAFISTLICLLVGYPMAYAIARSSQSSQTVLLLLIMMPTWTAILIRVYA 129
Query: 378 TLPLASS-----SVMLGLGYL---LAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIR 429
+ + S+ SV++GLG + L +T++ + I + ++ + PF + ++
Sbjct: 130 WMGILSNNGLLNSVLMGLGLISEPLTILNTNIA---VYIGIVYSYL--PFMILPLYANLV 184
Query: 430 KIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLASPENT 489
K +LLEA+ LGA SF K+ +PL NGI+ + F + E +L PE
Sbjct: 185 KHDPSLLEAASDLGARNFTSFWKITVPLSKNGIIAGCMLVFIPAVGEFVIPELLGGPETL 244
Query: 490 TLTLAIY-KFISSRQFGPASALSVVLMIISMVSFLLIER 527
+ ++ +F ++R + ASAL+VV++ I ++ +L +
Sbjct: 245 MIGKVLWQEFFNNRDWPVASALAVVMLAILIIPIILFNK 283
>gb|AAC12801.1| (U67851) ChtJ [Agrobacterium sp.] >gi|3153870|gb|AAC17433.1|
(AF065242) putative inner membrane protein ChtI
[Agrobacterium tumefaciens]
Length = 295
Score = 74.9 bits (181), Expect = 2e-12
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 15/261 (5%)
Query: 16 ILIPMLLLLSL-FYVPMVRVISLGFSLTS---LLSVLSDEYYRRVIAFTFVQALLSTLAT 71
+L P+ +LL + F +P++ ++ F + L + Y ++I T L +T T
Sbjct: 14 LLAPVFILLLVPFALPLLYILPSAFGGNAAGRFLKIFESPVYLKIIWTTVRITLEATAIT 73
Query: 72 LAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG------- 124
L V P A++ S FL L+ VPF+ ++ ++ I G+ G + G
Sbjct: 74 LVVSFPLAWLLSRATGFKAMFLGLLVLVPFLSSVLVRTFAWLAILGQRGLINGTLLSLGL 133
Query: 125 ----LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
L +L++ A+ILA V + P++ + + RI+ AA +LGA + I
Sbjct: 134 ISEPLPLLFSEPAVILALVHSSIPMMAFALVTVLRRIDGRVLLAANTLGANPLRAWFGIV 193
Query: 181 LPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALI 240
+PL + I ++ F F SF P LG + + I S D+ +++L +
Sbjct: 194 IPLSISGIQSGVIIIFLFTIASFIAPAFLGNQRQQMLAQVIQSEIETGADWPFAAALGIT 253
Query: 241 QLTISAILMYIYAKLIERYSR 261
I+ I++ + + + +SR
Sbjct: 254 LALIATIVVALLSWGLSFFSR 274
>emb|CAB59590.1| (AL132662) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 285
Score = 74.9 bits (181), Expect = 2e-12
Identities = 67/269 (24%), Positives = 130/269 (47%), Gaps = 20/269 (7%)
Query: 270 AKKRLKLDIEGIAILVYFIFVLVFIISPLFAVIYKALMFNDRL-----SLEWFRRAFSEE 324
A +RL L+ +V +F + ++++ F ++ RL +LE FR+A +
Sbjct: 13 ALRRLPLNAAAALTVVVCLFPVYWMVTTAFKPSTDIQSYDPRLVPGAWTLEHFRKAVGAD 72
Query: 325 YNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKG--LLEVFATLPLA 382
+F +SL+ L+ AVL+A+++AL A +AR ++RG+ +L VF
Sbjct: 73 GFALFWRNSLLVTLS-------AVLLALLVALGAAYAVARMRWRGRRQFMLAVFVAQMAP 125
Query: 383 SSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTL 442
S+++ + Y+++ RDT + + L + + PF + I I L EA+
Sbjct: 126 WESLIIPI-YIIS-RDTGMLDRLPTLTLIYFMITLPFTVVVLRGFIAGIPPELEEAAQVD 183
Query: 443 GASEALSFLKVELPLIVNGILVASIFSFAISAAEL--ATTYMLASPENTTLTLAIYKFIS 500
G + A +F +V PL+ G++ S+F F + E A ++ ++ TL + + F S
Sbjct: 184 GCTRAGAFRRVAFPLLAPGLMATSLFGFITAWNEFTYANFLIIKQQDSRTLPVWLSSFQS 243
Query: 501 S--RQFGPASALSVVLMIISMVSFLLIER 527
+ +G A + + + ++V FL ++R
Sbjct: 244 TFGTDWGATMAAATLFALPALVIFLALQR 272
>pir||A83610 sulfate transport protein CysW PA0281 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946124|gb|AAG03670.1|AE004466_4 (AE004466) sulfate
transport protein CysW [Pseudomonas aeruginosa]
Length = 289
Score = 74.9 bits (181), Expect = 2e-12
Identities = 59/261 (22%), Positives = 110/261 (41%), Gaps = 14/261 (5%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
L+ L LL YV + + GF + + + + T + +S L G+
Sbjct: 31 LVFALFLLLPLYVVLSEALKQGFG--TFFEAILEPDALAALKLTLIAVAISVPLNLLFGV 88
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG------GLGILYN 130
A+ S ++F GK L +LI +PF + VI L ++++FG G G + I++
Sbjct: 89 AAAWCVSKFEFRGKSILVTLIDLPFSVSPVIAGLIYVLLFGAQGYFGEWLSDHDIQIVFA 148
Query: 131 WKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILV 190
I+LA +F P V R + + +EAA LGA G+ +F +TLP + ++
Sbjct: 149 VPGIVLATLFVTVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTLPNIKWGLIY 208
Query: 191 ASLLTFTFCFMSFSIPLILGGYKYATIEV------AIFSSAMMLLDFKTSSSLALIQLTI 244
+L F ++ G+ +++ + F +S L L+ L I
Sbjct: 209 GVVLCTARAMGEFGAVSVVSGHIRGVTNTLPLHVEILYNEYNHVAAFSVASLLLLMALVI 268
Query: 245 SAILMYIYAKLIERYSREEEQ 265
+ + +++ S +E+
Sbjct: 269 LLLKQWSESRMSRLKSNADEE 289
Score = 71.4 bits (172), Expect = 2e-11
Identities = 63/258 (24%), Positives = 114/258 (43%), Gaps = 25/258 (9%)
Query: 281 IAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNT 340
+ +L + +F L F++ PL+ V+ +AL ++ F + + +L + T
Sbjct: 25 LIVLAWLVFAL-FLLLPLYVVLSEAL-----------KQGFGTFFEAILEPDALAALKLT 72
Query: 341 LKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTS 400
L I+V + ++ + A +++ +FRGK +L LP + S V+ GL Y+L F
Sbjct: 73 LIAVAISVPLNLLFGVAAAWCVSKFEFRGKSILVTLIDLPFSVSPVIAGLIYVLLFGAQG 132
Query: 401 LYGHWLL------------IALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEAL 448
+G WL I LA V PF R + +++ EA+ LGA+
Sbjct: 133 YFGEWLSDHDIQIVFAVPGIVLATLFVTVPFVARELIPLMQEQGTQEEEAARLLGANGWQ 192
Query: 449 SFLKVELPLIVNGILVASIFSFAISAAEL-ATTYMLASPENTTLTLAIYKFISSRQFGPA 507
F V LP I G++ + A + E A + + T TL ++ I ++
Sbjct: 193 MFWHVTLPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLPLHVEILYNEYNHV 252
Query: 508 SALSVVLMIISMVSFLLI 525
+A SV +++ M +L+
Sbjct: 253 AAFSVASLLLLMALVILL 270
>gb|AAG35386.1| (AF030414) ModB [Gluconacetobacter diazotrophicus]
Length = 228
Score = 74.9 bits (181), Expect = 2e-12
Identities = 56/210 (26%), Positives = 101/210 (47%), Gaps = 18/210 (8%)
Query: 340 TLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDT 399
T++ L +I++LPLA +AR K +L +LPL +LG +L+AF +
Sbjct: 15 TIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPPSVLGYYFLIAFGPS 74
Query: 400 SLYGHWLLIALAHATVAY--------------PFAFRTISISIRKIKKNLLEASLTLGAS 445
G W+ T+A+ PFA + I + R I + +E + TLGAS
Sbjct: 75 GP-GGWVARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIGRRPIEVAATLGAS 133
Query: 446 EALSFLKVELPLIVNGILVASIFSFAISAAELATTYMLAS--PENT-TLTLAIYKFISSR 502
+F V +PL GI+ A++ FA S E M+ P T L++A+Y ++ +
Sbjct: 134 PWRTFWTVAVPLAWPGIVTAAVLGFAHSVGEFGIVLMIGGDIPGRTRVLSVALYDYVENA 193
Query: 503 QFGPASALSVVLMIISMVSFLLIERIGEEV 532
++ A+ ++ +++ S + +L+ + E+
Sbjct: 194 RWHDANMIACGMVLFSFIVIVLLSALRGEI 223
Score = 72.6 bits (175), Expect = 1e-11
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 64 ALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGP-- 121
AL +TL + V +P A+ + K L ++I++P V+P ++ F+I FG SGP
Sbjct: 19 ALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPPSVLGYYFLIAFGPSGPGG 78
Query: 122 -----LGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVF 176
GG + +++ +++ + Y P V+ I +++ I E A +LGA + F
Sbjct: 79 WVARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIGRRPIEVAATLGASPWRTF 138
Query: 177 RKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG 211
+ +PL P I+ A++L F F I L++GG
Sbjct: 139 WTVAVPLAWPGIVTAAVLGFAHSVGEFGIVLMIGG 173
>sp|Q08382|MODB_RHOCA MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|541288|pir||D36914 integral membrane protein ModB -
Rhodobacter capsulatus >gi|310275|gb|AAA71910.1|
(L06254) part of molybdenum transport system
[Rhodobacter capsulatus]
Length = 228
Score = 74.9 bits (181), Expect = 2e-12
Identities = 53/219 (24%), Positives = 101/219 (45%), Gaps = 7/219 (3%)
Query: 47 VLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSV 106
+L D +A T A ++T+ LA+G P A+ S K + +L+++P V+P
Sbjct: 5 ILFDAAMLTTLALTLKLATVTTVLLLALGTPLAWWLSRGGGLWKEIVATLVSLPIVLPPT 64
Query: 107 IVALGFIIIFGKSGPLG---GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKE 163
++ +I G + PL G + + + +++ V Y+ P VV I +++ + P E
Sbjct: 65 VLGFYLLIAMGPNSPLTDLLGFKLSFTFAGLVVGSVIYSLPFVVNPIRNAFVAMGPRPME 124
Query: 164 AAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG---YKYATIEVA 220
A +L A F + LP P ++ ++L F F + L++GG + + V
Sbjct: 125 VAATLRASPLDAFFTVALPQAAPGLITGAILGFAHTVGEFGVVLMIGGGIPGRTKVLSVT 184
Query: 221 IFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERY 259
IF + L++ + LA L +S +++ + RY
Sbjct: 185 IF-DYVETLEWDKAHVLAGGMLAMSFVVILAMMLIERRY 222
>gi|10955062 motD [Agrobacterium tumefaciens] >gi|1381801|gb|AAC18648.1|
(AF242881) motD [Agrobacterium tumefaciens]
Length = 273
Score = 74.5 bits (180), Expect = 3e-12
Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 281 IAILVYFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEE-YNPMFGTSSLM-TIL 338
I + + L++++ P VI + F+D LE+ +A+S + + FG++ M
Sbjct: 19 IWLYAFGFIALLYLLIPTLIVI--PMSFSDSQYLEFPPKAYSLKWFETYFGSAEWMRATF 76
Query: 339 NTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD 398
+++ F + A I A + + L F LPL+ S+++ +G L F
Sbjct: 77 VSVRAAFFTSIFATIFGTAAAYGTWIGSAQLRTPLSGFFILPLSVPSILIAIGSLFVFSR 136
Query: 399 TSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLI 458
L + +AH +A PF F I+ + N A+ +LGAS A +F V LP I
Sbjct: 137 FGLVNTTAGLVIAHTMLAIPFVFIVITAGLTSYDMNQEMAARSLGASRARAFFTVTLPQI 196
Query: 459 VNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIIS 518
++ +++F+F +S E+ +++ TL ++ + + +A+S ++ +S
Sbjct: 197 KFSVITSALFAFYVSLDEVIVAMFISTGTGGTLNRKMFNALRDQVDPTIAAISTCMVAVS 256
Query: 519 MVSFLLIE 526
+ ++ +
Sbjct: 257 ITLLVMAQ 264
>sp|P76224|YNJC_ECOLI HYPOTHETICAL 56.2 KD PROTEIN IN XTHA-GDHA INTERGENIC REGION
Length = 511
Score = 74.5 bits (180), Expect = 3e-12
Identities = 108/544 (19%), Positives = 212/544 (38%), Gaps = 67/544 (12%)
Query: 11 MRKGLILIPMLLLLSLFYVPMV----RVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALL 66
+R LI + + ++++ Y P++ +IS SLT ++ +D QALL
Sbjct: 5 LRYALIFL-LWAMVAVIYAPLIPAALTLISPALSLTHWQALFADPQ--------LPQALL 55
Query: 67 STLATLAVGIPGAYVFSHYD----FPGKRFLRSLITVPFVM--PSVIVALGFIIIFGKSG 120
+TL + + GA + + +PG ++ R +P+++ P V A +++F G
Sbjct: 56 ATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVAFATSALLLFADGG 115
Query: 121 -----------PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLG 169
P+ GI + F + ++ V++ W + SLG
Sbjct: 116 LLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLW-ILAAVLSEKWLLQQVIVLD---SLG 171
Query: 170 AKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMML- 228
+ + LP + P++ +A L + + +ILG T+ V +
Sbjct: 172 YSRWQCLNWLLLPSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGD 231
Query: 229 LDFKTSSSLALIQLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFI 288
+D +T +LA + L + + + L+ R R RV +K + G + ++
Sbjct: 232 IDQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKPATPLLPGNTLAIFLP 291
Query: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAV 348
++ + V+ A++ + T + ++N+L G +A
Sbjct: 292 ------LTGVLCVVLLAILADQ-------------------STINSEALINSLTMGLVAT 326
Query: 349 LIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLI 408
IA++L L + + L + LPL + L L L G W +
Sbjct: 327 FIALLLLLLWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWL-------KLDGSWTAV 379
Query: 409 ALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIF 468
H P+ + + ++I L+ + TLG S A F V+ PL++ +L+A
Sbjct: 380 VWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAV 439
Query: 469 SFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERI 528
FA+ A+ T L + TLT S G +A ++ +++ ++ F L +
Sbjct: 440 GFAVGIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALV 499
Query: 529 GEEV 532
+ V
Sbjct: 500 AKWV 503
>pir||C64935 hypothetical protein b1755 - Escherichia coli (strain K-12)
>gi|1788052|gb|AAC74825.1| (AE000270) putative transport
system permease protein [Escherichia coli K12]
Length = 496
Score = 73.7 bits (178), Expect = 5e-12
Identities = 105/532 (19%), Positives = 206/532 (37%), Gaps = 66/532 (12%)
Query: 23 LLSLFYVPMV----RVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPG 78
++++ Y P++ +IS SLT ++ +D QALL+TL + + G
Sbjct: 1 MVAVIYAPLIPAALTLISPALSLTHWQALFADPQ--------LPQALLATLVSTTIAAVG 52
Query: 79 AYVFSHYD----FPGKRFLRSLITVPFVM--PSVIVALGFIIIFGKSG-----------P 121
A + + +PG ++ R +P+++ P V A +++F G P
Sbjct: 53 ALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVAFATSALLLFADGGLLYDYFPYFTPP 112
Query: 122 LGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITL 181
+ GI + F + ++ V++ W + SLG + + L
Sbjct: 113 MDRFGIGLGLTLAVKESAFLLW-ILAAVLSEKWLLQQVIVLD---SLGYSRWQCLNWLLL 168
Query: 182 PLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMML-LDFKTSSSLALI 240
P + P++ +A L + + +ILG T+ V + +D +T +LA +
Sbjct: 169 PSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDIDQQTKGALASL 228
Query: 241 QLTISAILMYIYAKLIERYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFA 300
L + + + L+ R R RV +K + G + ++ ++ +
Sbjct: 229 LLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKPATPLLPGNTLAIFLP------LTGVLC 282
Query: 301 VIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLAR 360
V+ A++ + T + ++N+L G +A IA++L L
Sbjct: 283 VVLLAILADQ-------------------STINSEALINSLTMGLVATFIALLLLLLWLE 323
Query: 361 VIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVAYPFA 420
+ + L + LPL + L L L G W + H P+
Sbjct: 324 WGPQRRQLWLWLPILLPALPLVAGQYTLALWL-------KLDGSWTAVVWGHLLWVMPWM 376
Query: 421 FRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAELATT 480
+ + ++I L+ + TLG S A F V+ PL++ +L+A FA+ A+ T
Sbjct: 377 LFILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAVGFAVGIAQYMPT 436
Query: 481 YMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERIGEEV 532
L + TLT S G +A ++ +++ ++ F L + + V
Sbjct: 437 LWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALVAKWV 488
>pir||F69162 sulfate transport system permease protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621548|gb|AAB84984.1| (AE000832) sulfate transport
system permease protein [Methanobacterium
thermoautotrophicum]
Length = 235
Score = 73.7 bits (178), Expect = 5e-12
Identities = 55/216 (25%), Positives = 96/216 (43%), Gaps = 3/216 (1%)
Query: 35 ISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLR 94
I GF L D + A T + +L ST V +P A V +F G+RF+
Sbjct: 11 ILTGFIRALELMASLDPELMDITARTLMISLSSTGIAAVVAVPLASVIDSREFRGRRFII 70
Query: 95 SLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSW 154
++I + MP+V+V L ++ +SGPLG +L+ +IL P+V ++
Sbjct: 71 NIIQTLYSMPTVLVGLFVFLLISRSGPLGSFNLLFTPAGMILGQSILILPLVTGFSLTAL 130
Query: 155 ERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGG--Y 212
+ P ++ A SLGA + V K+ +++ A +L F + ++LGG
Sbjct: 131 RSVKPELRDLARSLGATEYQVMMKVITEARY-AVMAAIILGFGRAISEVGVAIMLGGNIR 189
Query: 213 KYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAIL 248
+ + S + + S +L +I L IS ++
Sbjct: 190 GFTRVITTAISLETSKGNIELSIALGIILLLISLMV 225
>pir||F83240 probable permease of ABC transporter PA3252 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9949375|gb|AAG06640.1|AE004747_13 (AE004747)
probable permease of ABC transporter [Pseudomonas
aeruginosa]
Length = 279
Score = 73.7 bits (178), Expect = 5e-12
Identities = 54/262 (20%), Positives = 120/262 (45%), Gaps = 18/262 (6%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLG-------FSLTSLLSVLSDEYYRRVIAFTFVQALLS 67
L L+P +F + + ++L +SL + L + +YR+ I + A S
Sbjct: 12 LFLLPFAAFFVIFQIAPLAWVALNSLKASDAWSLANYLELFGSPFYRQAIRHSLEIAGWS 71
Query: 68 TLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGL-- 125
+L L + + G++ H D + F+ + + V +A FII+ G +G L L
Sbjct: 72 SLLGLLIAVLGSHSLRHVDSRLRDFVMAFSNMTSNFAGVPLAFAFIILLGFNGALTLLLK 131
Query: 126 -------GILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRK 178
LY+ +I+ + ++ P+ V ++ +++ + ++E+A LGA G+ +R
Sbjct: 132 QAGWIDDFNLYSKTGLIILYTYFQIPLGVMLLYPAFDALREDWRESAALLGANGWQYWRH 191
Query: 179 ITLPLLLPSILVASLLTFTFCFMSFS--IPLILGGYKYATIEVAIFSSAMMLLDFKTSSS 236
I +P+L P++L ++ +++ L G + I + + + D +S+
Sbjct: 192 IGIPVLTPALLGTFVILLANALGAYATVYSLTTGNFNVIPIRIGALVAGDVFPDPNMASA 251
Query: 237 LALIQLTISAILMYIYAKLIER 258
LA++ + + ++ ++ L+ R
Sbjct: 252 LAMVLVGLMTLITLVHQWLLRR 273
>gb|AAK42825.1| ABC transporter, permease [Sulfolobus solfataricus]
Length = 548
Score = 73.0 bits (176), Expect = 8e-12
Identities = 121/542 (22%), Positives = 226/542 (41%), Gaps = 51/542 (9%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
+IP++L + + I FS+ ++ + ++ F+ A++STL + I
Sbjct: 17 IIPLILTFVIVGINFSGAIKSSFSVAPPPEIIYNTFF-----FSLFTAVVSTLLGYILAI 71
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIF--GKSGPLGGLGILYN---- 130
D K+ L LI +PF +P AL ++I F G LGI Y+
Sbjct: 72 T-------VDIYPKKLLILLILLPFTIPFTASALIWVISFYGGYGWFTYFLGINYDPLYF 124
Query: 131 ----WKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
A+ L + + P+ +I +S + I KE++ G + K+ P L
Sbjct: 125 SKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIKESSQIDGLTLSQYYFKVAFPYSLK 184
Query: 187 SILVASLLTFTFCFMSFSIPLIL----GGYKYATIEVAIFSSAMMLLDFKTSSSLALIQL 242
IL+A L+TF +F +P ++ G+ T+ + ++ +F + A I
Sbjct: 185 GILLAFLITFVLSMGNFDLPYVMTQGGPGFSTTTLPLIVYFMMFQYDNFSGGALFASILA 244
Query: 243 TISAILMYIYAKLIE-RYSREEEQRVLIAKKRLKLDIEGIAILVYFIFVLVFIISPLFAV 301
I++I A L++ + R + I K K+ IA+L+ I +++F+ P++ +
Sbjct: 245 LIASIPAIGVALLVKSKGFRFSLPAIKIPDKIFKI----IALLISLI-IIIFLDFPVYWM 299
Query: 302 IYKALMFNDRLSLEWFRR--AFSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLA 359
+ A N +L++ + +E+ + SSL + + + I LI +L + L+
Sbjct: 300 VLVATRPN---TLDFLKPPVLIPKEFTLSYLVSSLESSVPYIISSIIVSLIVGVLTILLS 356
Query: 360 RVIARE---KFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLIALAHATVA 416
+ A E KF LL L S+S ++ + YL+ D L W+ +AL A
Sbjct: 357 SLGAYEGARKFWFWLLLLSIYLYALPSTSYIIPV-YLMT-SDLHLINTWIGLALPSAIFT 414
Query: 417 YPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSFAISAAE 476
FAF T+ K EA+ G + LK+ LPL ++ + SF +
Sbjct: 415 ASFAFWTMFNFYIDFPKVYEEAAEIDGMKNKI--LKLILPLSRPFLIATFVISFTFAWHL 472
Query: 477 L-------ATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLIERIG 529
L T Y + P + T I+ + Q AL +++ + +++ +
Sbjct: 473 LFYPLVLSETPYQMNFPPTGSETATIFALNAISQGSVNWALLASSALVASLPVVIVSYVA 532
Query: 530 EE 531
++
Sbjct: 533 QD 534
>pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (strain MSB8)
>gi|4981787|gb|AAD36308.1|AE001779_10 (AE001779) sugar
ABC transporter, permease protein, putative [Thermotoga
maritima]
Length = 265
Score = 73.0 bits (176), Expect = 8e-12
Identities = 52/197 (26%), Positives = 91/197 (45%), Gaps = 14/197 (7%)
Query: 64 ALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLG 123
AL+S + +G+P Y + Y FPGK +R + + +P ++VA+ ++++ +
Sbjct: 72 ALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLYMR----- 126
Query: 124 GLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPL 183
+ + LAH P VV + +S + I+ Y+EA M G F F +ITLPL
Sbjct: 127 -FNLADTTLGVALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLPL 185
Query: 184 LLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLD-FKTSSSLALIQL 242
LP + +++ F + IL T+ I ++AM D FK ++
Sbjct: 186 ALPGLAASAIFAFIMSWNEVFASSIL-TLTNRTLPAHILNTAMASPDYFKFAAG------ 238
Query: 243 TISAILMYIYAKLIERY 259
TI A+ ++ I +Y
Sbjct: 239 TIMAVPAMVFIFFIRKY 255
>dbj|BAB04964.1| (AP001511) unknown conserved protein in others [Bacillus
halodurans]
Length = 445
Score = 73.0 bits (176), Expect = 8e-12
Identities = 62/241 (25%), Positives = 112/241 (45%), Gaps = 29/241 (12%)
Query: 321 FSEEYNPMFGTSSLMTILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLP 380
FS N + + + NTL F ++V ++L L +A +I R F+G+GL+ V +P
Sbjct: 199 FSHYVNYVQDSRMWAAMSNTLFFTVVSVAAELVLGLAIALLINRT-FKGRGLVRVAVLIP 257
Query: 381 LASSSVMLGLGYLLAF-----------------RDTSLY-----GHWLLIALAHATVAYP 418
A + + + + + D+S+ G I A P
Sbjct: 258 WAIPTAVAAMMWRYLYDGQFGVIAHYFEQLGLISDSSVLLSTGAGAMFSIIFADVWKTTP 317
Query: 419 FAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIFSF--AISAAE 476
+ + ++ I +L EA+ GA+ +F K+ LPL+ + ILVA +F A +
Sbjct: 318 YMALLLLAGLQTIPNSLYEAAKVDGANRIQTFFKITLPLLKSAILVALLFRTLDAFRVFD 377
Query: 477 LATTYMLASPENTTLTLAIYKF---ISSRQFGPASALSVVLMI-ISMVSFLLIERIGEEV 532
L P N+T +++IY + S + FG SALSV++ + ++++SF I+ IG ++
Sbjct: 378 LIFVLTGGGPANSTESISIYAYRTLFSQQNFGAGSALSVIVFLSVALISFAFIKFIGSDL 437
Query: 533 W 533
+
Sbjct: 438 F 438
>pir||F71934 molybdate ABC transporter, permease - Helicobacter pylori (strain
J99) >gi|4154951|gb|AAD05996.1| (AE001476) Molybdate ABC
transporter, permease [Helicobacter pylori J99]
Length = 224
Score = 72.6 bits (175), Expect = 1e-11
Identities = 58/221 (26%), Positives = 104/221 (46%), Gaps = 11/221 (4%)
Query: 50 DEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVA 109
D + + +F AL++TL L +GI Y S +L+ +P V+P ++
Sbjct: 2 DHEFLITMRLSFSLALITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLG 61
Query: 110 LGFIIIFGKSGPLGG-------LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYK 162
++IF S LG + ++++++ +IL V ++ P +V I S+ + K
Sbjct: 62 FYLLLIFSPSSFLGAFLQDVLNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLK 121
Query: 163 EAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVA-- 220
EA+ SLG + + LP + PS+L+A + TF F + ++LGG VA
Sbjct: 122 EASYSLGKGEYYTLFFVLLPNIKPSVLMAIITTFMHTIGEFGVVMMLGGDILGETRVASI 181
Query: 221 -IFSSAMMLLDFKTSSSLALIQLTISAILMYIYAKLIERYS 260
IF+ A L++ + AL IS L+++ L ++ S
Sbjct: 182 TIFNEA-EALNYSKAHQYALTLTLISFSLLFVTLFLNKKQS 221
>pir||D82201 spermidine/putrescine ABC transporter, permease protein VC1426
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655924|gb|AAF94583.1| (AE004221)
spermidine/putrescine ABC transporter, permease protein
[Vibrio cholerae]
Length = 256
Score = 72.6 bits (175), Expect = 1e-11
Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 20 MLLLLSLFYVPMVRVISL------------GFSLTSLLSVLSDEYYRRVIAFTFVQALLS 67
M L+ Y+P++ +I+ GF+ ++++++ + + A+ S
Sbjct: 10 MSLVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFS 69
Query: 68 TLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGI 127
A +G A Y F GK+ + ++ V + P +++A+ + +F G G
Sbjct: 70 ATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFT 129
Query: 128 LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPS 187
L ++AH+ + P VV + + + EAA LGA +V+ +KI LPL P+
Sbjct: 130 L------LIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPA 183
Query: 188 ILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAI 247
+ LL+FT I + G Y + + I+S + + + ++LA + L +S +
Sbjct: 184 VAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEV-NALATVMLVVSLV 242
Query: 248 LMYIYAKLIER 258
L+ + ++L+ R
Sbjct: 243 LV-VASQLLAR 252
Score = 70.2 bits (169), Expect = 5e-11
Identities = 53/249 (21%), Positives = 110/249 (43%), Gaps = 7/249 (2%)
Query: 286 YFIFVLVFIISPLFAVIYKALMFND-RLSLEWFRRAFSEE-YNPMFGTSSLMTIL-NTLK 342
+ V +F+ P+ +I A FN+ + ++W F+ + Y+ + SLM +++
Sbjct: 9 FMSLVYLFLYLPIIVLI--ANSFNENKFGIKW--GGFTTKWYHALMNNDSLMQAAWHSIN 64
Query: 343 FGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLY 402
+ A ++ A + R +F+GK ++ + + S +++ + L F
Sbjct: 65 VAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAK 124
Query: 403 GHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGI 462
+ + +AH T PF T+ + +LEA+ LGA E + K+ LPL +
Sbjct: 125 LGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAV 184
Query: 463 LVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSF 522
+ SF +S ++ + + P L L IY + +AL+ V++++S+V
Sbjct: 185 AAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLV 244
Query: 523 LLIERIGEE 531
+ + + E
Sbjct: 245 VASQLLARE 253
>pir||G83240 probable permease of ABC transporter PA3253 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9949376|gb|AAG06641.1|AE004747_14 (AE004747)
probable permease of ABC transporter [Pseudomonas
aeruginosa]
Length = 265
Score = 72.6 bits (175), Expect = 1e-11
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 20/251 (7%)
Query: 281 IAILVYFIFVLVFIISPLFAVI--YKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTIL 338
+ ++ I VL + L+++ + A + D L+L+W+ +S++ L+
Sbjct: 16 VVCALFLILVLPLAATLLYSLATQWSATLLPDGLTLKWYLTLWSDQ-------RFLLAFA 68
Query: 339 NTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD 398
+L F A+ +V+L LPL VI R G++ V LP A ++ +G L +
Sbjct: 69 RSLLVCFGALAFSVLLILPLMFVIHYHFPRLDGVMNVLILLPFAVPPIVSSVGLLQLYAS 128
Query: 399 TSLY---GHWLLIALAHATVAYPFAFRTISISIRKIK-KNLLEASLTLGASEALSFLKVE 454
L W+L+ + T+A PF +R I+ +++ I ++L++A+ LGAS + L V
Sbjct: 129 GPLEMIGTPWVLVG-CYFTIALPFMYRAITNNLQAINLRDLMDAAHLLGASTWKAALLVV 187
Query: 455 LPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVL 514
LP + G++VA + SF+ E +L TL + F+++ + S V
Sbjct: 188 LPNLRKGVMVALLLSFSFLIGEFVFANLLVGTRYETLQV----FLNNMRNSSGHYTSAV- 242
Query: 515 MIISMVSFLLI 525
++S F+L+
Sbjct: 243 -VVSYFVFVLV 252
>pir||E75187 sugar abc transporter, permease protein PAB2335 - Pyrococcus abyssi
(strain Orsay) >gi|5457457|emb|CAB48948.1| (AJ248283)
SUGAR ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 277
Score = 72.2 bits (174), Expect = 1e-11
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 16/253 (6%)
Query: 287 FIFVLV------FIISPLFAVIYKALMFNDRLSLEWFRRAFSEEY--NPMFGTSSLMTIL 338
FIF +V I+S L+A KA +N + +F+ ++ +F + I
Sbjct: 17 FIFTVVAWILIPIIVSTLYAFSTKADYYNPHKVIP---TSFTSQWVKTILFTLGAWSGIK 73
Query: 339 NTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD 398
N++ + ++I+ +L +P IAR F+GK +++ ++ + ++ +
Sbjct: 74 NSIIVAVLTIIISFLLGIPAGYAIARYVFKGKDTIKLSIVALRMFPIPVMAIPLVVLYIK 133
Query: 399 TSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLI 458
+L L +ALAH +A PF S + K L EA + G + +F + LPL
Sbjct: 134 LNLIDTLLGVALAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFKSITLPLA 193
Query: 459 VNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASA----LSVVL 514
+ G+ A++F+F +S E+ +L + +N TL I ++ G A A + +
Sbjct: 194 LPGLAAAAMFTFVMSWNEVFVASIL-TLKNRTLPAQILSIVAGAAGGAAPAYYKFAAAFI 252
Query: 515 MIISMVSFLLIER 527
MI+ + F+ R
Sbjct: 253 MILPAMLFIFFAR 265
>pir||E81344 probable ABC transport system permease Cj0730 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968187|emb|CAB73004.1| (AL139076) putative ABC
transport system permease [Campylobacter jejuni]
Length = 279
Score = 72.2 bits (174), Expect = 1e-11
Identities = 60/268 (22%), Positives = 128/268 (47%), Gaps = 23/268 (8%)
Query: 15 LILIPMLLLLSLFYV-PMVRVISLGF--------SLTSLLSVLSDEYYRRVIAFTFVQAL 65
L ++P ++ + F + P++ ++ F SL + + + ++Y + I + +
Sbjct: 9 LSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSLANFIHIFESKFYLQSIINSLQISF 68
Query: 66 LSTLATLAVGIPGAYVFSHYDFPGK--RFLRSLITVPFVMPSVIVALGFIIIFGKSGP-- 121
+S++ L +G+ +Y P K +FL SL T+ V +A FII+ G +G
Sbjct: 69 ISSIFGLLIGLLASYSLFVLA-PSKICKFLFSLNTMISNFSGVPLAFAFIIVLGSNGVVN 127
Query: 122 --LGGLGI-----LYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFV 174
L LGI +Y + + +V++ P+ + ++ +++ + + A LG F+
Sbjct: 128 VFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAILLLLPAFKSLENSHLNACKMLGGGNFL 187
Query: 175 VFRKITLPLLLPSILVASLLTFTFCFMSFS--IPLILGGYKYATIEVAIFSSAMMLLDFK 232
+ KI LPLL P++ ++ F F +++ L G + A + +A + + LD
Sbjct: 188 YWLKIALPLLAPALFGVFVILFANAFGAYATIYALSSGNFNVAPVRIAALIAGDINLDPY 247
Query: 233 TSSSLALIQLTISAILMYIYAKLIERYS 260
+S+L++I I ++ +I L ++Y+
Sbjct: 248 MASALSIIITIIMLVVTFIANFLSKKYN 275
>pir||T35801 probable polyamine ABC-transporter integral membrane protein -
Streptomyces coelicolor >gi|3413308|emb|CAA20220.1|
(AL031225) putative polyamine ABC-transporter integral
memb rane protein [Streptomyces coelicolor A3(2)]
Length = 309
Score = 71.8 bits (173), Expect = 2e-11
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 33/271 (12%)
Query: 16 ILIPMLLLLSLFYV-PMVRVISL---------GFSLTSLLSVLSD---EYYRRVIAFTFV 62
+L+P +L L +F+ PMV S G+ +T + D EY+ + + +
Sbjct: 32 LLLPGILWLVVFFAAPMVYQASTSVQTGSLEEGYKVTWHFATYWDALTEYWPQFLR-SVA 90
Query: 63 QALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPL 122
A +T+ L +G P AY+ + + + L+ PF +I L + I GP+
Sbjct: 91 YAASATVLCLLLGYPLAYLIAFRAGRWRNLIMILVIAPFFTSFLIRTLAWKTILADGGPV 150
Query: 123 -GGLGILY--------NWKA---------IILAHVFYNY-PVVVRVIASSWERINPHYKE 163
G L L+ W + ++ + YN+ P ++ + +S ERI+ E
Sbjct: 151 VGALNTLHVLDVTGWLGWTSGDRVLATPLAVVCGLTYNFLPFMILPLYTSLERIDGRLHE 210
Query: 164 AAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFS 223
AA L AK VFRK+T PL +P ++ +LLTF + +LG I I S
Sbjct: 211 AAGDLYAKPSTVFRKVTFPLSMPGVVSGTLLTFIPATGDYVNASLLGSADTGMIGNVIQS 270
Query: 224 SAMMLLDFKTSSSLALIQLTISAILMYIYAK 254
+ +LD+ T+++L+ I + ++ Y +
Sbjct: 271 QFLRVLDYPTAAALSFILMAAILAMVTFYIR 301
>pir||C72279 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981788|gb|AAD36309.1|AE001779_11
(AE001779) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 281
Score = 71.8 bits (173), Expect = 2e-11
Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 37/267 (13%)
Query: 15 LILIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDE-----YYRRVIAFTFVQALLSTL 69
LIL +L L+ L P+ L F+ SDE + R V F A+ +T+
Sbjct: 10 LILPAVLYLVLLMGYPLFETFRLAFT--------SDEGFLGNFKRLVENGGFWGAMKNTI 61
Query: 70 ATLAVGIP-------GAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG-- 120
AV +P G +F + F G + I +P + V AL IF +G
Sbjct: 62 LLTAVIVPLQLIFALGLALFVNQKFKGYTTVLYFIAIPLALSDVTAALMSYTIFSPNGYL 121
Query: 121 ------------PLGGLGILYNWK---AIILAHVFYNYPVVVRVIASSWERINPHYKEAA 165
P+ G ++ + I+L V+ P+V ++ + + IN Y EAA
Sbjct: 122 NKILMNLHLIERPIYFFGYMFKAREFWVIVLTEVWRATPLVFIILLAGLQSINKEYLEAA 181
Query: 166 MSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSA 225
G + F KI LPLL PSI+ A LL F F F + +L G + +
Sbjct: 182 DLFGFSRWKKFTKIILPLLKPSIMSALLLRTLFAFQIFGVVWLLAGRDIPVLAGETYYWY 241
Query: 226 MMLLDFKTSSSLALIQLTISAILMYIY 252
+ D K +S+ AL+ ++ ++ + Y
Sbjct: 242 TFMNDPKMASAYALVIALVTIVVSWFY 268
>pir||A81301 probable anion-uptake ABC-transport system permease protein Cj1539c
[imported] - Campylobacter jejuni (strain NCTC 11168)
>gi|6968958|emb|CAB73955.1| (AL139078) putative
anion-uptake ABC-transport system permease protein
[Campylobacter jejuni]
Length = 239
Score = 71.8 bits (173), Expect = 2e-11
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Query: 17 LIPMLLLLSLFYVPMVRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVGI 76
++ +L+L +F + I GF L +DE I T + + +S + L +G
Sbjct: 1 MLKLLILKRIF----LDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIGF 56
Query: 77 PGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAIIL 136
P ++ ++F KRF++ ++ P+V V L + GPLG G+L+ KA+IL
Sbjct: 57 PLGFILGFFEFKLKRFIKLIVDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKALIL 116
Query: 137 AHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLTF 196
P+V+ + ++ E +N + S + + L I V + L +
Sbjct: 117 GQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTMIYELRFALISVVA-LAY 175
Query: 197 TFCFMSFSIPLILGG---YKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYIYA 253
+ +I+GG Y TI AI S +F + +LAL+ + I+ L +I
Sbjct: 176 GRIVAEVGVAMIVGGNIKYDTRTITTAI-SLETNKGEFASGIALALVLILIAFCLNFITH 234
Query: 254 KL 255
KL
Sbjct: 235 KL 236
>gb|AAC12802.1| (U67851) ChtK [Agrobacterium sp.] >gi|3153871|gb|AAC17434.1|
(AF065242) putative inner membrane protein ChtK
[Agrobacterium tumefaciens]
Length = 290
Score = 71.4 bits (172), Expect = 2e-11
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 22/200 (11%)
Query: 57 IAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIF 116
+A + +L+T A L F F + L +L+ P +P+V+ ALG I++
Sbjct: 83 VATCLLSLVLATFAVLG--------FGRQKFILQGVLEALVQAPLSVPAVVFALGAILLV 134
Query: 117 GKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVF 176
+ +G++ II+AH +PVV + ++++ I+P AA SLGA + VF
Sbjct: 135 AR------VGLVDTEIGIIIAHTVLIFPVVYLIASATYSSIDPRLSLAAASLGANPWSVF 188
Query: 177 RKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSS 236
R I PLLLP + + +L+ F + L T+ ++ + F TS
Sbjct: 189 RTIVFPLLLPGLAIGALIAVLLSFDESVASIFLSDLSVKTLPRKLWEG----IRFNTSPE 244
Query: 237 LALIQLTISAILMYIYAKLI 256
A +SA+L+ + I
Sbjct: 245 SA----AVSAVLLGVTCAFI 260
>pir||C72756 probable multiple sugar-binding transport system permease protein
APE0040 - Aeropyrum pernix (strain K1)
>gi|5103428|dbj|BAA78949.1| (AP000058) 302aa long
hypothetical multiple sugar-binding transport system
permease protein [Aeropyrum pernix]
Length = 302
Score = 71.4 bits (172), Expect = 2e-11
Identities = 59/208 (28%), Positives = 98/208 (46%), Gaps = 19/208 (9%)
Query: 14 GLILIPMLLLLSLFYV---PMVRVISLG--------FSLTSLLSVLSDEYYRRVIAF--T 60
G L+ +L + LF V P VI G F++ + + S + Y + +
Sbjct: 40 GFALVWLLPFIGLFMVSVRPYGEVIVKGWWNIVDATFTMDNYIKAWSYDPYSVSGGYINS 99
Query: 61 FVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSG 120
+ AL +T+ +A AY FS + FP K +L + + +P IV + ++
Sbjct: 100 LIVALPATVIPVAAASFAAYGFSRFSFPLKSYLFLVTILLMALPQQIVVVPLFLL----- 154
Query: 121 PLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKIT 180
L LG++ + IIL H + ++ + + ++ + +EAA GA F +F KI
Sbjct: 155 -LKNLGLINTFPGIILVHSAWGMAWIIFFMKNFFDILPREVEEAARVDGASDFRIFYKIV 213
Query: 181 LPLLLPSILVASLLTFTFCFMSFSIPLI 208
LP+ LP IL AS+L FT+ + SF LI
Sbjct: 214 LPMSLPGILSASVLQFTWVWSSFFFELI 241
>emb|CAB94619.1| (AL359214) putative sugar transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 276
Score = 71.0 bits (171), Expect = 3e-11
Identities = 59/253 (23%), Positives = 122/253 (47%), Gaps = 15/253 (5%)
Query: 280 GIAILVYFIFVLVFIISPLFAVIYK-ALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTIL 338
G+ VY++F F P +I + + F ++ E F+ A ++ + ++SL+ +
Sbjct: 21 GLVFPVYWMFATAF--KPTGDIISENPVWFPTDITFEHFKTATEADHFWTYVSNSLIVTV 78
Query: 339 NTLKFGFIAVLIAVILALPLARVIAREKFRGK-GLLEVFATLPLASSSVMLGLGYLLAFR 397
AV+ ++++AL + +AR +F+G+ G + F +A VM+ Y++ R
Sbjct: 79 -------CAVVFSLVIALAGSFALARMRFKGRRGFIVGFMLAQMAPWEVMVIAIYMIV-R 130
Query: 398 DTSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPL 457
D S+ + + L + + PF T+ + + K L E+++ G + A +F +V LPL
Sbjct: 131 DASMLNSLVPLTLFYMMMILPFTILTLRGFVAAVPKELEESAMVDGCTRAQAFRRVILPL 190
Query: 458 IVNGILVASIFSFAISAAELATTYML---ASPENTTLTLAIYKFISSRQFGPASALSVVL 514
+ G++ S+F F + EL ++ A + L L ++ + +G A S +
Sbjct: 191 LAPGLMSTSMFGFITAWNELPLVLVVNKEAESQTLPLWLTSFQTVFGDNWGATMAASSLF 250
Query: 515 MIISMVSFLLIER 527
I ++ F+ ++R
Sbjct: 251 AIPILILFVYLQR 263
>dbj|BAA35947.1| (D90748) Spermidine/putrescine transport system permease protein
PotB. [Escherichia coli]
Length = 226
Score = 70.6 bits (170), Expect = 4e-11
Identities = 55/211 (26%), Positives = 95/211 (44%), Gaps = 14/211 (6%)
Query: 16 ILIPMLLLLSLFYVPM--VRVISLGFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLA 73
+ +P L+++ ++ + + F+L + +L D Y V+ + AL++TLA L
Sbjct: 13 VFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLL-DPLYFEVLLHSLNMALIATLACLV 71
Query: 74 VGIPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGG--------- 124
+G P A+ + + L L+ VPF S+I G I G L
Sbjct: 72 LGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVID 131
Query: 125 --LGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLP 182
+ I++ A+I+ V+ P +V + SS E+++ EAA LGA F +I +P
Sbjct: 132 TPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIP 191
Query: 183 LLLPSILVASLLTFTFCFMSFSIPLILGGYK 213
L +P I+ LL F + ++GG K
Sbjct: 192 LTMPGIIAGCLLVMLPAMGLFYVSDLMGGAK 222
>sp|P75057|POTC_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTC
HOMOLOG >gi|2146656|pir||S73423 spermidine/putrescine
transport system permease potI - Mycoplasma pneumoniae
(strain ATCC 29342) >gi|1673752|gb|AAB95745.1|
(AE000011) spermidine/putrescine transport system
permease [Mycoplasma pneumoniae]
Length = 286
Score = 70.6 bits (170), Expect = 4e-11
Identities = 63/255 (24%), Positives = 118/255 (45%), Gaps = 20/255 (7%)
Query: 286 YFIFVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSL----------M 335
+F+ VLV I PL V+ + FN + F NP S +
Sbjct: 15 FFVIVLVLIYLPLIIVVL--VSFNGSSTRGNIVLDFGNVLNPNPDAKSAYLRLGEADFAI 72
Query: 336 TILNTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLA 395
+LN++ G I V++++ +A+ A + R + + A LA+ ++ G+ +L
Sbjct: 73 PLLNSVIIGLITVIVSIPIAIMTAFALLRSRQWLNKTVFGIANFSLATPDIITGISLVLL 132
Query: 396 FRDTSL-----YGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSF 450
F +T L G + +I+ +H + + P+A I ++K+ +NL+ AS LG S +F
Sbjct: 133 FANTWLSFNQQLGFFTIIS-SHISFSVPYALVLIYPKMQKLNRNLILASQDLGYSPIATF 191
Query: 451 LKVELPLIVNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASAL 510
+ LP ++ IL A + FA S + T ++ T + +Y F + A A
Sbjct: 192 FHITLPYLLPSILSAILVVFATSFDDYVITSLVQGSVKTVAS-ELYSFRKGIK-AWAIAF 249
Query: 511 SVVLMIISMVSFLLI 525
+L+++S+++ LL+
Sbjct: 250 GTILILVSILAVLLV 264
>pir||G70179 spermidine/putrescine ABC transporter, permease protein (potC)
homolog - Lyme disease spirochete
>gi|2688564|gb|AAB91527.1| (AE001165)
spermidine/putrescine ABC transporter, permease protein
(potC) [Borrelia burgdorferi]
Length = 263
Score = 70.2 bits (169), Expect = 5e-11
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 19/245 (7%)
Query: 20 MLLLLSLFYVPMVRVISL------------GFSLTSLLSVLSDEYYRRVIAFTFVQALLS 67
+ L+LS Y+P++ +I GFSL + + + I T + A++S
Sbjct: 10 LFLILSFIYLPIIILIIYSFNSGDSGFIWQGFSLKWYKEIFASSQIKSAIFNTILIAIIS 69
Query: 68 TLATLAVGIPGAY-VFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLG 126
+L ++ +GI GAY ++ + K L S+ + + P ++ + + + +
Sbjct: 70 SLTSVVIGIIGAYAIYKSENKKLKTILLSVNKITIINPDIVTGISLMTFYS------AIK 123
Query: 127 ILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLP 186
+ + ++++H+ ++ P VV +I + + +AA LGA +F I P +
Sbjct: 124 MQLGFSTMLISHIIFSTPYVVIIILPKLYSLPKNIIDAAKDLGASEIQIFFNIIYPEIAG 183
Query: 187 SILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISA 246
SI +L+ FT F I G + + + I S + ++ A++ TI +
Sbjct: 184 SIATGALIAFTLSIDDFLISFFTTGQGFNNLSILINSLTKRGIKPVINAISAILFFTILS 243
Query: 247 ILMYI 251
+L I
Sbjct: 244 LLFII 248
>pir||T47063 hypothetical protein [imported] - Yersinia pestis
>gi|4106651|emb|CAA21406.1| (AL031866) ORF81, len=275
aa, highly similar to Pseudomonas fluorescens MtlG
(mtlG), 39.5% identity in 258 aa overlap, Fasta scores:
opt: 689,E():0, also similar to E. coli MalG protein
35.3% identity in 266 aa overlap, Fasta scores: opt:
626, E(): 0. >
Length = 275
Score = 69.9 bits (168), Expect = 7e-11
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 31/241 (12%)
Query: 3 SDSRINLSMRKGLILIPMLLLLSLFYVPMVRVISLGFS-----------------LTSLL 45
SDS + R G L+ ++++L F +P+ ++++ F L +
Sbjct: 2 SDSLKFICQRTGFYLL-LVVILVFFLLPIYWLVTMSFKTYIDAFAMPPKLWFTPILDNYR 60
Query: 46 SVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAY---VFSHYDFPGKRFLRSLITVPFV 102
VL + + R + + +L+ST L +G AY F K+F+ SL P +
Sbjct: 61 QVLGNGDFIRAFGNSLLISLVSTFLCLILGALFAYGLVFFIERKGRAKQFIMSLRYAPVI 120
Query: 103 MPSVIVALGFIIIFGKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYK 162
M +++ + ++I LG+ N+ +IL + N P + ++ + +E I P +
Sbjct: 121 M--LVIPVYYLIT--------KLGMTDNYLVLILVYTVANVPFTILMVTTFFEDIPPEIR 170
Query: 163 EAAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGYKYATIEVAIF 222
EAA GA + VF + LPL + + +LT F + F I L L G T+ VAI
Sbjct: 171 EAARVDGASEWRVFLSVMLPLARTGLAASGVLTLFFIWNEFQIVLTLSGDSTQTLPVAIT 230
Query: 223 S 223
S
Sbjct: 231 S 231
>pir||G83620 probable permease of ABC transporter PA0204 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946039|gb|AAG03593.1|AE004458_8 (AE004458) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 269
Score = 69.9 bits (168), Expect = 7e-11
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 286 YFIFVLVFIISPLFAVIYKALMFNDR------LSLEWFRRAFSEE-YNPMFGTSSLMTIL 338
+ + +++ +P+ ++ + N SL+W+R AF+ + G S L+ +
Sbjct: 22 FSLLFYLYLYAPILVLVVYSFNANQSATVWTGFSLDWYRAAFANQALRQAAGNSLLIAVC 81
Query: 339 NTLKFGFIAVLIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRD 398
+ A IA + AL +R KFRG L LPL +++G+ L F
Sbjct: 82 ASAA----ATAIATLAALGTSR---GAKFRGLRLSMGAIMLPLVLPEIVVGVATLALFST 134
Query: 399 TSLYGHWLLIALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLI 458
L + + +AH PFA+ I + + +L +A+ L A + KV LPL+
Sbjct: 135 VGLSLGYGNLIIAHTVFCIPFAYLPIRARLDDMDLSLEQAAADLYAGPWRTLRKVTLPLL 194
Query: 459 VNGILVASIFSFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIIS 518
GI + +F +S + M++ TTL + I+ + +A+S +++ +S
Sbjct: 195 APGIFSGLMLAFIVSLDNFVISMMVSQAGTTTLPIFIFGLLRMGVTPDVNAVSTLILGVS 254
Query: 519 MVSFLLIERIGE 530
++ L +G+
Sbjct: 255 VIFVSLSYLLGK 266
>pir||G72690 probable spermidine/putrescine transport system permease protein
APE0943 - Aeropyrum pernix (strain K1)
>gi|5104612|dbj|BAA79927.1| (AP000060) 257aa long
hypothetical spermidine/putrescine transport system
permease protein [Aeropyrum pernix]
Length = 257
Score = 69.5 bits (167), Expect = 9e-11
Identities = 58/236 (24%), Positives = 104/236 (43%), Gaps = 12/236 (5%)
Query: 21 LLLLSLFYVPMVRVISL----GFSLTSLLSVLSDEYYRRVIAFTFVQALLSTLATLAVG- 75
L LL+ FY P+ + GF L L VL+ +Y VIA + A + LA + +
Sbjct: 20 LYLLAFFYAPLAYLAVYSGEEGF-LGPYLEVLTRPHYYVVIANSAAVAAATALAVMLLAL 78
Query: 76 IPGAYVFSHYDFPGKRFLRSLITVPFVMPSVIVALGFIIIFGKSGPLGGLGILYNWKAII 135
+P Y+ + L +L PF++ ++ L ++ L +G+ W A
Sbjct: 79 VPSYYIALEAGGRERIVLLALFVSPFIVDVLLRTLSIKLV------LTLVGVKPGWTATF 132
Query: 136 LAHVFYNYPVVVRVIASSWERINPHYKEAAMSLGAKGFVVFRKITLPLLLPSILVASLLT 195
+ V+ N P+ + + ++ EAA +LGA V+R + PL LP + ++
Sbjct: 133 IGLVYENLPLGILFAFAGVSGVSRSLVEAARTLGAGRLEVYRSVVAPLALPWLAAGFVVV 192
Query: 196 FTFCFMSFSIPLILGGYKYATIEVAIFSSAMMLLDFKTSSSLALIQLTISAILMYI 251
F F + +P +LGG T+ I+ + + S++ L+ +SA Y+
Sbjct: 193 FLISFTDYVVPSLLGGTTGFTVGSLIYHLILSGDRWDLGSAVTLMVTLLSAAAAYL 248
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.330 0.143 0.405
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164963148
Number of Sequences: 2977
Number of extensions: 6281416
Number of successful extensions: 24915
Number of sequences better than 1.0e-10: 157
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 24367
Number of HSP's gapped (non-prelim): 306
length of query: 533
length of database: 189,106,746
effective HSP length: 56
effective length of query: 477
effective length of database: 155,591,474
effective search space: 74217133098
effective search space used: 74217133098
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.8 bits)
S2: 167 (69.5 bits)