BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0545 (PAB0545) DE:ABC-TRANSPORTER ATP-BINDING PROTEIN
(329 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 652 0.0
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 496 e-139
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 307 1e-82
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 298 8e-80
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 292 3e-78
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 289 4e-77
pir||C71220 probable sugar-binding transport ATP-binding protein... 282 5e-75
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 279 3e-74
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 279 3e-74
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 274 1e-72
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 273 2e-72
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 272 4e-72
gi|10954682 probable mikimopine transporter gene~similar to potA... 272 6e-72
pir||F64751 probable ABC-type transport protein b0262 - Escheric... 271 7e-72
sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 271 7e-72
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 270 2e-71
pir||H83240 probable ATP-binding component of ABC transporter PA... 270 2e-71
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 268 5e-71
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 268 6e-71
pir||B75207 multiple sugar-binding transport ATP-binding protein... 267 1e-70
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 267 1e-70
dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-bindin... 267 1e-70
pir||F72510 probable multiple sugar-binding transport ATP-bindin... 266 2e-70
pir||B83571 probable ATP-binding component of ABC transporter PA... 266 3e-70
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 265 5e-70
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 264 9e-70
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 264 9e-70
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 264 1e-69
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 263 2e-69
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 263 2e-69
pir||T35802 probable polyamine ABC-transporter ATP-binding prote... 263 2e-69
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 262 4e-69
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 261 8e-69
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 260 1e-68
sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 259 2e-68
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 259 2e-68
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 259 3e-68
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 258 5e-68
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 256 4e-67
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 256 4e-67
gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas... 255 5e-67
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 255 6e-67
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 254 8e-67
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 254 1e-66
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 253 2e-66
pir||A83621 probable ATP-binding component of ABC transporter PA... 253 2e-66
pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [... 252 3e-66
gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens] 250 2e-65
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 250 2e-65
gi|11466425 probable transport protein [Mesostigma viride] >gi|7... 250 2e-65
gi|11467821 probable transport protein [Nephroselmis olivacea] >... 249 4e-65
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 249 4e-65
sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK) >... 249 5e-65
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 248 8e-65
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 247 1e-64
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 246 2e-64
pir||E70943 probable ABC-type sugar transport protein - Mycobact... 246 2e-64
pir||E75564 ABC transporter, ATP-binding protein - Deinococcus r... 246 2e-64
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 246 2e-64
pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879... 246 3e-64
emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycob... 245 5e-64
pir||T34595 ABC-transporter ATP-binding protein - Streptomyces c... 245 5e-64
pir||C83353 probable ATP-binding component of ABC maltose/mannit... 243 2e-63
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 243 2e-63
emb|CAC02745.1| (AL390114) probable sulfate transport ATP-bindin... 243 2e-63
pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 ... 243 3e-63
pir||E82302 iron(III) ABC transporter, ATP-binding protein VC061... 243 3e-63
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 242 3e-63
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 242 5e-63
pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog ... 241 1e-62
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 241 1e-62
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 241 1e-62
sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC >... 240 1e-62
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 240 2e-62
pir||E71296 probable spermidine/putrescine ABC transporter, ATP-... 240 2e-62
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 240 2e-62
pir||G83605 probable ATP-binding component of ABC transporter PA... 240 2e-62
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 240 2e-62
sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 239 3e-62
pir||T03550 ATP-binding transport protein polk - Rhodobacter cap... 239 3e-62
pir||H72690 probable spermidine/putrescine transport ATP-binding... 239 4e-62
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 239 4e-62
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop... 239 4e-62
gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Th... 238 5e-62
pir||G81926 probable polyamine permease ATP-binding protein NMA0... 237 2e-61
sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDIN... 236 2e-61
gb|AAA23639.1| (M32101) cysA [Escherichia coli] 236 3e-61
pir||C81179 spermidine/putrescine ABC transporter, ATP-binding p... 236 3e-61
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 236 3e-61
gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens] 236 3e-61
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 235 4e-61
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 235 4e-61
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 235 4e-61
dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding pr... 235 4e-61
emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli] 235 6e-61
gb|AAB88581.1| (M93437) CycB [Thermus thermophilus] 235 6e-61
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 235 6e-61
dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.] 235 8e-61
gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus] 233 2e-60
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 233 2e-60
pir||F71279 probable sugar ABC transporter, ATP-binding protein ... 233 3e-60
gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti] 233 3e-60
gi|7524830 sulfate transport system permease protein [Chlorella ... 232 5e-60
emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [... 232 5e-60
dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens] 232 5e-60
pir||S63613 probable ATP-binding protein cymD - Klebsiella oxyto... 231 9e-60
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 230 1e-59
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 230 1e-59
pir||T45204 probable sugar ABC transporter ugpC [imported] - Myc... 229 3e-59
sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDI... 228 6e-59
pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protei... 228 6e-59
pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (... 228 8e-59
pir||T03479 probable ABC transporter ATP-binding protein - Rhodo... 228 8e-59
dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding pr... 227 1e-58
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 226 3e-58
pir||E70952 probable sugC protein - Mycobacterium tuberculosis (... 226 3e-58
pir||MMECMK inner membrane protein malK - Escherichia coli >gi|4... 226 4e-58
sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 225 5e-58
sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 224 9e-58
pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC... 224 9e-58
gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC1... 224 9e-58
gb|AAA93151.1| (U12007) MsiK [Streptomyces lividans] 222 4e-57
sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 222 4e-57
pir||E83248 probable ATP-binding component of ABC transporter PA... 222 4e-57
gb|AAC12799.1| (U67851) ChtG [Agrobacterium sp.] >gi|3153868|gb|... 221 7e-57
gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPa... 220 2e-56
pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [im... 220 2e-56
pir||T47062 hypothetical protein [imported] - Yersinia pestis >g... 220 2e-56
pir||S05329 inner membrane protein malK - Salmonella typhimurium 219 3e-56
sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK ... 219 5e-56
sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 217 1e-55
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 217 2e-55
gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other ... 217 2e-55
pir||F83203 probable ATP-binding component of ABC transporter PA... 215 6e-55
gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter;... 215 7e-55
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 214 1e-54
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 214 1e-54
pir||T35450 ABC transporter ATP binding protein - Streptomyces c... 210 1e-53
pir||T36808 probable sugar transport system ATP-binding chain - ... 206 3e-52
gb|AAB59057.1| (J01648) malK [Escherichia coli] 206 4e-52
sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFU... 205 6e-52
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 205 8e-52
emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding ... 205 8e-52
pir||G81012 spermidine/putrescine ABC transporter, ATP-binding p... 204 1e-51
pir||T10888 iron utilization protein C - Haemophilus influenzae ... 190 2e-47
sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HIT... 189 3e-47
gb|AAC21775.1| (U32695) iron(III) ABC transporter, ATP-binding p... 189 3e-47
gb|AAD29279.1|AF112365_2 (AF112365) ProVL [Streptomyces coelicol... 187 1e-46
pir||T36641 probable ABC-type transport system ATP-binding chain... 187 1e-46
pir||T36154 probable ABC-type transport system ATP-binding prote... 187 1e-46
pir||C69223 anion permease - Methanobacterium thermoautotrophicu... 185 5e-46
pir||T43920 YfuC protein [imported] - Yersinia enterocolitica >g... 185 8e-46
gb|AAF40473.1|AF184955_1 (AF184955) OpuAA [Lactococcus lactis] 181 1e-44
pir||F64204 spermidine/putrescine transport ATP-binding protein ... 178 6e-44
sp|P47288|POTA_MYCGE SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 178 6e-44
gb|AAF04258.1|AF139575_1 (AF139575) BusAA [Lactococcus lactis] 178 6e-44
gb|AAF37878.1|AF234619_1 (AF234619) OpuAA [Lactococcus lactis] 178 6e-44
sp|P75059|POTA_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 175 5e-43
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 174 2e-42
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 166 4e-40
gi|11498246 nitrate ABC transporter, ATP-binding protein (nrtC-2... 163 3e-39
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 161 1e-38
sp|P95155|MODC_MYCTU MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 158 7e-38
pir||T44856 molybdenum transport ATPase (EC 3.6.1.-) [imported] ... 158 7e-38
pir||H83207 probable ATP-binding component of ABC transporter PA... 151 1e-35
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 150 2e-35
pir||H81448 probable molybdenum transport ATP-binding protein Cj... 150 2e-35
sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 148 8e-35
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 147 2e-34
sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ... 146 2e-34
pir||S75100 ABC transport protein - Synechocystis sp. (strain PC... 146 4e-34
pir||G83214 probable ATP-binding component of ABC transporter PA... 146 4e-34
emb|CAA71848.1| (Y10908) sulfate transport ATP-binding protein [... 145 7e-34
pir||C64666 glutamine transport protein glnQ - Helicobacter pylo... 145 9e-34
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 144 2e-33
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ... 143 2e-33
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 139 3e-32
emb|CAB92896.1| (AL356992) putative ABC-transporter ATP-binding ... 137 2e-31
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 136 3e-31
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 136 5e-31
sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PR... 134 2e-30
pir||B82020 ABC transporter ATP-binding protein NMA0254 [importe... 133 2e-30
sp|P30769|MKL_MYCLE POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDIN... 132 4e-30
sp|O06784|MKL_MYCTU POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDIN... 132 4e-30
pir||E81247 cell division ATP-binding protein FtsE NMB0007 [impo... 132 5e-30
pir||H71718 probable ribonucleotide transport ATP-binding protei... 132 7e-30
gb|AAG35385.1| (AF030414) ModC [Gluconacetobacter diazotrophicus] 132 7e-30
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 131 1e-29
pir||B83629 probable ATP-binding component of ABC transporter PA... 131 2e-29
gi|11498996 iron (III) ABC transporter, ATP-binding protein (hem... 130 3e-29
pir||F83598 cell division protein FtsE PA0374 [imported] - Pseud... 129 4e-29
gb|AAB36524.1| (U76418) FtsE-like protein [Neisseria gonorrhoeae] 129 6e-29
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 127 1e-28
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 127 1e-28
pir||T02364 hypothetical protein T8F5.19 - Arabidopsis thaliana ... 127 1e-28
pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC -... 126 3e-28
pir||H70788 probable peptidetransport system ABC-transporter ATP... 124 1e-27
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 123 2e-27
pir||F72405 ABC transporter, ATP-binding protein - Thermotoga ma... 123 2e-27
pir||H81784 probable ABC transporter ATP-binding protein NMA2131... 123 3e-27
dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-bin... 123 3e-27
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 123 3e-27
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 122 5e-27
pir||C81208 ABC transporter, ATP-binding protein NMB0356 [import... 122 5e-27
pir||D83281 histidine transport protein HisP PA2926 [imported] -... 122 5e-27
dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacill... 121 1e-26
gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius] 121 1e-26
gi|11498429 branched-chain amino acid ABC transporter, ATP-bindi... 120 2e-26
pir||G72578 probable ABC transporter ATP-binding protein APE1911... 120 2e-26
gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stu... 120 3e-26
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 119 4e-26
sp|P39326|YTFR_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 119 4e-26
pir||G72687 probable high-affinity branched-chain amino acid tra... 118 7e-26
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 116 3e-25
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 116 3e-25
gb|AAC69841.1| (AF076683) oligopeptide transporter putative ATPa... 115 1e-24
pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) P... 115 1e-24
pir||A72282 oligopeptide ABC transporter, ATP-binding protein - ... 114 2e-24
pir||D71179 probable sugar ABC transporter - Pyrococcus horikosh... 111 1e-23
gb|AAF58271.1| (AE003815) Mdr50 gene product [Drosophila melanog... 110 2e-23
pir||E69098 phosphate transport system ATP-binding - Methanobact... 108 1e-22
gb|AAA16186.1| (L07065) P-glycoprotein/multidrug resistance prot... 106 4e-22
pir||A47377 multidrug resistance protein Mdr50 - fruit fly (Dros... 106 4e-22
gb|AAK42946.1| ABC transporter, ATP binding protein (branched ch... 106 5e-22
pir||D69180 ABC transporter - Methanobacterium thermoautotrophic... 105 7e-22
emb|CAA51349.1| (X72832) ABC transporter [Streptococcus equisimi... 102 4e-21
pir||C81187 ABC transporter, ATP-binding protein NMB0549 [import... 102 4e-21
gb|AAG19337.1| (AE005028) ribose ABC transporter ATP-binding; Rb... 102 4e-21
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 102 6e-21
pir||E83087 probable ATP-binding component of ABC transporter PA... 101 1e-20
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 101 2e-20
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding ... 100 2e-20
sp|P21449|MDR2_CRIGR MULTIDRUG RESISTANCE PROTEIN 2 (P-GLYCOPROT... 100 3e-20
pir||C81916 probable ABC transporter ATP-binding protein NMA0729... 100 3e-20
gi|11497906 polysaccharide ABC transporter, ATP-binding protein ... 100 4e-20
gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melano... 97 3e-19
gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanog... 97 3e-19
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 96 6e-19
gi|8051575 ATP-binding cassette sub-family G member 1 isoform b;... 90 3e-17
pir||G02068 white homolog - human >gi|1314277|gb|AAC51098.1| (U3... 90 3e-17
sp|P45844|WHIT_HUMAN WHITE PROTEIN HOMOLOG (ATP-BINDING CASSETTE... 90 3e-17
dbj|BAB13728.1| (AB038161) ABC transporter [Homo sapiens] 90 3e-17
gi|11423559 ATP-binding cassette sub-family G member 1 isoform a... 90 3e-17
pir||I76773 ATP binding component of ABC-transporter - Escherich... 85 1e-15
dbj|BAA28332.1| (AB010293) ATP binding component of ABC-transpor... 85 1e-15
dbj|BAA28340.1| (AB010295) ATP binding component of ABC-transpor... 85 1e-15
sp|P25371|ADP1_YEAST PROBABLE ATP-DEPENDENT PERMEASE PRECURSOR >... 84 2e-15
dbj|BAA28336.1| (AB010294) ATP binding component of ABC-transpor... 84 2e-15
gi|10383780 Active transport ATPase; Adp1p [Saccharomyces cerevi... 84 2e-15
pir||C72615 probable transport ATP-binding protein APE1380 - Aer... 81 2e-14
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 652 bits (1663), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
MVRVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF
Sbjct: 1 MVRVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG
Sbjct: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE
Sbjct: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL
Sbjct: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
Query: 241 RSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQG 300
RSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQG
Sbjct: 241 RSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQG 300
Query: 301 KEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
KEIIAEDSLARYEEIPKKVYIKVKRFSLL
Sbjct: 301 KEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 496 bits (1264), Expect = e-139
Identities = 243/330 (73%), Positives = 288/330 (86%), Gaps = 2/330 (0%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
MV +ELR + K+F F+L+V L VKDGEL+++LGPSGCGKTTTLRIIAGLE+PDKG V F
Sbjct: 1 MVSIELRDIIKRFGEFELKVSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRVYF 60
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
DGRD+T LPPY RNIG VFQDYALFPHM VFKNVAFGLEVR++PR EIE++VREVL+LVG
Sbjct: 61 DGRDITDLPPYERNIGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVREVLDLVG 120
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L+GFENR+PE+LSGGQQQRVALARALVIEP+VLLLDEPLSNLDAKVRE LR EIKRI KE
Sbjct: 121 LRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGEIKRIVKE 180
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
LGITT+YVTHDQEEAM +SDRIAVMNFGRIEQVG P +LYYNPK EFVA FLG N+++L
Sbjct: 181 LGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDLYYNPKNEFVANFLGISNIVEL 240
Query: 241 RSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQG 300
+ G ACLG+LCF VG +G K+FFRPE+V +G EG+EAEV+ YE+LPGR+R RLS++G
Sbjct: 241 EAKEGRACLGDLCFEVGREGKGKIFFRPENVAVG-EGIEAEVIGYELLPGRVRLRLSIEG 299
Query: 301 KEIIAEDSLARY-EEIPKKVYIKVKRFSLL 329
+EIIAE+ L+R ++IPKKV I+V+ F +L
Sbjct: 300 REIIAEELLSRIGKKIPKKVRIRVREFKIL 329
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 307 bits (778), Expect = 1e-82
Identities = 170/309 (55%), Positives = 212/309 (68%), Gaps = 8/309 (2%)
Query: 4 VELRGVEKKF-PGFKLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V L G+ K+F L+ +DLE+KDGE + +LGPSGCGKTTTLRI+AGLERPD G V FD
Sbjct: 6 VRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRVYFD 65
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
GRDVT LPP RN+ VFQ YAL+PHM VF N+AF L+++KLPR EI R+VR EL+ +
Sbjct: 66 GRDVTGLPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRVRWAAELLEI 125
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+R P QLSGGQQQRVA+ARA+V EPEVLL+DEPLSNLDA +R +R EIK++Q+ L
Sbjct: 126 DHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIKKLQRRL 185
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLK 239
G+T +YVTHDQ EAM I DRI VMNFG I+QVG P ++Y+ P FVA F+G+ NL
Sbjct: 186 GVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHRPANTFVATFIGSPQMNLFS 245
Query: 240 LRSTNG-VACLGELCFNVGV-DGPVKVFFRPESVEIGKEGV--EAEVMDYEILPGRIRFR 295
+ G + LG + VG+ DG V V RPE V +GK + EA V E L
Sbjct: 246 GKVAGGRLEALGGIVEGVGLPDGEVLVGVRPEDVALGKGDLTFEAYVDFVEDLGSDSVVH 305
Query: 296 LSVQGKEII 304
L Q ++I
Sbjct: 306 LKTQSGQVI 314
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 298 bits (754), Expect = 8e-80
Identities = 167/325 (51%), Positives = 211/325 (64%), Gaps = 23/325 (7%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + L V K+F RV L + DGE+ ++LGPSGCGKTTTLR+IAG E PD+G V
Sbjct: 1 MAGIRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRV 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
RDVT L PY RN VFQ+YAL+PHM VF N+A+GL++RKLPR EI R+VR EL
Sbjct: 61 YIGSRDVTMLKPYERNTAMVFQNYALWPHMRVFDNIAYGLKLRKLPRSEIVRRVRWAAEL 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ + +R P QLSGGQQQRVA+ARA+V EPEVLL+DEPLSNLDA +R +R EI R+Q
Sbjct: 121 LEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMREEIVRLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
K LG+T +YVTHDQEEA++IS R+AVMN GR+EQVG P+E+Y P T FVA F+G +L
Sbjct: 181 KRLGVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEVYEKPATYFVATFIGRSTVL 240
Query: 239 KLRSTN-------GVACLGELCFNVGVD--------GPVKVFFRPESVEIGKEGVEAEVM 283
R + VA G L VG D VKV RPE V++G E V
Sbjct: 241 DGRVSEVLGSGMVRVALEGGLSI-VGTDMEGGLRQGERVKVVIRPERVKVGHEYNGENVF 299
Query: 284 DYEI-----LPGRIRFRLSVQGKEI 303
+ ++ L R + ++ V G+EI
Sbjct: 300 EGKVSLAMFLGWRTQLKVEVGGQEI 324
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 292 bits (740), Expect = 3e-78
Identities = 166/343 (48%), Positives = 221/343 (64%), Gaps = 20/343 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
MV ++L + KKF F ++L++KDGE +++LGPSG GK+T L IAG+ +P G +
Sbjct: 1 MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
FD +DVT LPP RN+G VFQ++AL+PHM V+KN+AF LE+RK PR+EI++KVREV ++
Sbjct: 61 YFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKM 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ + NR P QLSGGQQQRVA+ARALV EPEVLLLDEPLSNLDA +R +R E+KR+Q
Sbjct: 121 LHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--N 236
KELGITT+YVTHDQ EA+A++DRIAV+ G I QVG P E+YY PK +FV FLG N
Sbjct: 181 KELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMN 240
Query: 237 LLKLRSTNGVACLG------------ELCFNVGVDGPVKVFFRPESVEIGK---EGVEAE 281
++ + +G + E+ G+ V + FRP EI K EG+ E
Sbjct: 241 FVEAKVEDGKLVITEKSKLPIPKQYVEIVKETGIT-EVIIGFRPHDAEIVKGEGEGIVGE 299
Query: 282 VMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVK 324
V +E L +SV + + +KV IKVK
Sbjct: 300 VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFSFGEKVTIKVK 342
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 289 bits (731), Expect = 4e-77
Identities = 166/350 (47%), Positives = 223/350 (63%), Gaps = 24/350 (6%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
MVR+ L + KKF F ++LE+KDGE +++LGPSG GK+T L +AG+ +P G +
Sbjct: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
FD RDVT LPP RNIG VFQ++AL+PHM V+KN+AF LE+RK P+ EI+ KVR+V ++
Sbjct: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ ++ +R P QLSGGQQQRVA+ARALV EPEVLLLDEPLSNLDA +R +R E+KR+Q
Sbjct: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--N 236
KELGITT+YVTHDQ EA+A++DRIAV+ G+I QVG P E+YY P +FV FLG N
Sbjct: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
Query: 237 LLKLRSTNGVACLGELCFNVGVDGP--------------VKVFFRPESVEIGK---EGVE 279
++ R +G + E N + P V + FRP E+ K EG+
Sbjct: 241 FVEARVEDGKLLISE---NNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIV 297
Query: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
EV +E L +SV + + +KV IK+K S++
Sbjct: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVV 347
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 282 bits (713), Expect = 5e-75
Identities = 136/249 (54%), Positives = 190/249 (75%), Gaps = 4/249 (1%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
MV V+L + K+F F +++L +KDGE + +LGPSGCGKTTTLR+IAGLE P +G +
Sbjct: 10 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI 69
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
F RDVT+LPP RNI VFQ YA++PHM V++N+AF L+++K P+ EI+++VR EL
Sbjct: 70 YFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAEL 129
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ ++ NR P QLSGGQ+QRVA+ARA+V+EP+VLL+DEPLSNLDAK+R ++R EIK++Q
Sbjct: 130 LQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQ 189
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--N 236
++L +TT+YVTHDQ EAM + DRIAVMN G++ Q+G P E+Y P + FVA F+G N
Sbjct: 190 QKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMN 249
Query: 237 LLKLRSTNG 245
+L++ +G
Sbjct: 250 ILEVSVGDG 258
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 279 bits (707), Expect = 3e-74
Identities = 149/281 (53%), Positives = 194/281 (69%), Gaps = 9/281 (3%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
VEL G+ K + + D L ++ GE S+LGPSG GKTT +RIIAGL PD+G V +
Sbjct: 6 VELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVRIN 65
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G D T LPPY RN+G VFQ+ ALFPH+NVF+NVA+GL +RK+P EI+ +V LELV L
Sbjct: 66 GEDCTSLPPYRRNVGMVFQNLALFPHLNVFENVAYGLRLRKIPEGEIKDRVYRYLELVNL 125
Query: 122 KG--FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
+ R EQLSGGQQQRVA+ARALV EP +LLLDEPL LD K+R+ + E+KRIQK
Sbjct: 126 DPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHMISELKRIQK 185
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
LG T +YVTHDQ EA+ +SDR+AV+N GRI Q+G P E+Y PKT FVA F+G N L+
Sbjct: 186 TLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRFVASFIGETNFLE 245
Query: 240 LRSTNG--VACLGELCFNVGVDGPVK--VFFRPESVEIGKE 276
R NG + +G++ G+DG + + RPE ++I ++
Sbjct: 246 ARVVNGEVITEIGKVRV-FGLDGAREFCISIRPEKLKINQQ 285
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 279 bits (706), Expect = 3e-74
Identities = 134/235 (57%), Positives = 181/235 (77%), Gaps = 2/235 (0%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
MV V L + KKF F +++L +KDGE + +LGPSGCGKTTTLR+IAGLE P +G +
Sbjct: 1 MVEVRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
F R+VT+LPP RNI VFQ YA++PHM V+ N+AF L+++K PR EI+++VR EL
Sbjct: 61 YFGDREVTYLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRVRWAAEL 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ ++ +R P QLSGGQ+QRVA+ARA+V+EP+VLL+DEPLSNLDAK+R ++R EIK++Q
Sbjct: 121 LQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
++L +TT+YVTHDQ EAM + DRIAVMN G++ QVG P E+Y P + FVA F+G
Sbjct: 181 QKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEVYLKPNSVFVATFIG 235
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 274 bits (693), Expect = 1e-72
Identities = 159/342 (46%), Positives = 210/342 (60%), Gaps = 40/342 (11%)
Query: 4 VELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+E+R V K F FK ++L+++ GEL+++LGPSGCGKTT LRIIAGLE PD GN++F
Sbjct: 3 IEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFH 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE------IERKVREV 115
G DV+ RN+GFVFQ YALF HM VF NVAFGL ++ P+ E I+ KV E+
Sbjct: 63 GEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMK--PKGERPGESAIKAKVHEL 120
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
L +V L +R PEQLSGGQ+QR+ALARAL +EP++LLLDEP LDAKVR+ LR +
Sbjct: 121 LNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLA 180
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
R+ +E+ +T+++VTHDQEEAM ++DRI VMN G IEQ+G P E+Y NP ++FV FLG
Sbjct: 181 RLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVYHFLGDS 240
Query: 236 NLLKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGV----EAEVMDYEILPGR 291
N L+L + + FRP V + + V AEV D L
Sbjct: 241 NRLQLGNDQ------------------HLLFRPHEVSLSRSAVAEHRAAEVRDIRPLGAI 282
Query: 292 IRFRLSVQGKEIIAE-------DSLARYEEIPKKVYIKVKRF 326
R L V G++ + E DSLA + +Y K K F
Sbjct: 283 TRVTLKVDGQDELIEAEVVKDHDSLAGLAR-GETLYFKPKAF 323
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 273 bits (691), Expect = 2e-72
Identities = 137/280 (48%), Positives = 200/280 (70%), Gaps = 8/280 (2%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
++ K GE I++LGPSGCGK+T LR IAGL + + G + + +D+T L P RNIG VF
Sbjct: 22 INFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVF 81
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YALFP++NVF+NVAFGL+++K+ +K+IE++V+++L+LV L+ + P +LSGGQ QR
Sbjct: 82 QNYALFPNLNVFENVAFGLKIKKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQR 141
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALAR+LVI+P++LLLDEPLS LDAK+R+ LR++IK IQKEL +TT++VTHDQEEA+ +S
Sbjct: 142 VALARSLVIKPDLLLLDEPLSALDAKIRKYLRVQIKEIQKELELTTIFVTHDQEEALELS 201
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVD 259
D I +MN G+I Q LY P++ FVA F+G N+L + + + + D
Sbjct: 202 DTIILMNEGKIIQNSNANNLYLLPESHFVASFIGNYNILSPKELDSL--------GLKHD 253
Query: 260 GPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQ 299
+ RPE++EI EG+EA++ + +L IR+R+ VQ
Sbjct: 254 FKKDIALRPETIEISNEGLEAKIKEKSLLGNIIRYRVRVQ 293
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 272 bits (688), Expect = 4e-72
Identities = 139/239 (58%), Positives = 177/239 (73%), Gaps = 6/239 (2%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + L GV K+F VDL +KDGE +LGPSGCGKTTTLR+IAGLE PD+G +
Sbjct: 14 MAEIRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRI 73
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRK----LPRKEIERKVRE 114
L DG DVTF P RN+ VFQ+YAL+PHM+VF N+AF L +R+ L + +I R+V E
Sbjct: 74 LIDGEDVTFKDPKDRNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDIRRRVIE 133
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
V +L+ ++ +R P QLSGGQQQRVALARALV P+V L+DEPLSNLDA +R ++R E+
Sbjct: 134 VAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRLAMRAEL 193
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
K++QK+L ITT+YVTHDQ EAM+++DRIAVMN GR+ QVG P E+Y PK FVA F+G
Sbjct: 194 KKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEVYMRPKHTFVATFIG 252
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 272 bits (687), Expect = 6e-72
Identities = 140/287 (48%), Positives = 200/287 (68%), Gaps = 15/287 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + ++ + K + FK ++L+V++GE +SILGPSGCGK+T LRIIAGLE P G++
Sbjct: 1 MGEISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ G+ VT P + R IGFVFQ++AL+PH+ VFKNVA GLE+RK P+ E++++V + L +
Sbjct: 61 VIAGKQVTNDPVWKRKIGFVFQNFALWPHLTVFKNVAMGLELRKTPKDELQQRVTKALRM 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
V L+ +R+P QLSGGQQQRVALARA+V++P+VLLLDEPLS LD +R+ +++E+K +Q
Sbjct: 121 VQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQVELKALQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG----- 233
+ LG+TT++VTHDQEEA+++SDR+ VMN G IEQ+ P +Y P +E+VA+F+G
Sbjct: 181 RTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNIYNKPVSEYVARFVGEAFFF 240
Query: 234 ----TG-NLLKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGK 275
TG N L L N VA ++ G F RPE V + K
Sbjct: 241 KGEVTGSNELVLDGGNAVAVKSDV---PAAAGKAVAFVRPEWVSLSK 284
>pir||F64751 probable ABC-type transport protein b0262 - Escherichia coli
>gi|1552831|gb|AAB08683.1| (U70214) hypothetical
[Escherichia coli] >gi|1786457|gb|AAC73365.1| (AE000134)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 352
Score = 271 bits (686), Expect = 7e-72
Identities = 138/335 (41%), Positives = 216/335 (64%), Gaps = 10/335 (2%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
VELR V K+F + ++L + G+++++LGPSGCGKTT LR++AGLE+P +G + D
Sbjct: 11 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 70
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G DVT R+I VFQ YALFPHM++ +NV +GL++ +PR E++ +V+E L +V L
Sbjct: 71 GEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDL 130
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+GFE+R +Q+SGGQQQRVALARAL+++P+VLL DEPLSNLDA +R S+R +I+ +QK+
Sbjct: 131 EGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQF 190
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
IT++YVTHDQ EA A+SD + VMN G I Q+G P +LY P + F+A F+G NL
Sbjct: 191 DITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPAT 250
Query: 242 STNGVACLG----ELCFNVGVDGPVKVFFRPESVEIGKEGVEAE---VMDYEILPGRIRF 294
++G + + G G V RPE++ + G E++ + + +
Sbjct: 251 FSDGYVDIYGYHLPRPLHFGTQGEGMVGVRPEAITLSDRGEESQRCVIRHVAYMGPQYEV 310
Query: 295 RLSVQGKEIIAEDSLARYE-EIPKKVYIKVKRFSL 328
+ G+EI+ + + R + ++ ++ Y+++ + +
Sbjct: 311 TVEWHGQEILLQVNATRLQPDVGEQYYLEIHPYGM 345
>sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
Length = 348
Score = 271 bits (686), Expect = 7e-72
Identities = 138/335 (41%), Positives = 216/335 (64%), Gaps = 10/335 (2%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
VELR V K+F + ++L + G+++++LGPSGCGKTT LR++AGLE+P +G + D
Sbjct: 7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 66
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G DVT R+I VFQ YALFPHM++ +NV +GL++ +PR E++ +V+E L +V L
Sbjct: 67 GEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDL 126
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+GFE+R +Q+SGGQQQRVALARAL+++P+VLL DEPLSNLDA +R S+R +I+ +QK+
Sbjct: 127 EGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQF 186
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
IT++YVTHDQ EA A+SD + VMN G I Q+G P +LY P + F+A F+G NL
Sbjct: 187 DITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPAT 246
Query: 242 STNGVACLG----ELCFNVGVDGPVKVFFRPESVEIGKEGVEAE---VMDYEILPGRIRF 294
++G + + G G V RPE++ + G E++ + + +
Sbjct: 247 FSDGYVDIYGYHLPRPLHFGTQGEGMVGVRPEAITLSDRGEESQRCVIRHVAYMGPQYEV 306
Query: 295 RLSVQGKEIIAEDSLARYE-EIPKKVYIKVKRFSL 328
+ G+EI+ + + R + ++ ++ Y+++ + +
Sbjct: 307 TVEWHGQEILLQVNATRLQPDVGEQYYLEIHPYGM 341
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 270 bits (683), Expect = 2e-71
Identities = 149/321 (46%), Positives = 216/321 (66%), Gaps = 15/321 (4%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +V++ GV+K F + +DL V +GE + +LGPSGCGKTT LR IAGLE+ G +
Sbjct: 1 MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
F+ RDVT LPP RNI VFQ YA++PHM V+ N+A+ L+++K+P++EIE++V+ +L
Sbjct: 61 FFNDRDVTNLPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAADL 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ + +R P QLSGGQ+QRVA+ARA+V EPEVLL+DEPLSNLDA +R +R E+K++Q
Sbjct: 121 LHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL- 237
+ +G+TT+YVTHDQ EAM + DRIAVMN G+++QVG P E+Y++P FVA F+G+ +
Sbjct: 181 ERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFVGSPQMN 240
Query: 238 ---LKLRSTNGVACL--GELCFNVGVD-GPVKVF--FRPESVEIGKE----GVEAEVMDY 285
+++RS L GE+ D G KV RPE+V + ++ +E EV
Sbjct: 241 FLEMEVRSEGNSVVLQNGEIKIPAKTDPGAKKVILGIRPENVYLEEKPNTLKLEGEVYFA 300
Query: 286 EILPGRIRFRLSVQGKEIIAE 306
E L L+V ++I+A+
Sbjct: 301 EKLMSDTILHLNVGSEKIVAK 321
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 270 bits (682), Expect = 2e-71
Identities = 145/290 (50%), Positives = 190/290 (65%), Gaps = 12/290 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+D GE +++LGPSGCGK+T LR IAGL D G +L DG DV LPP R I VF
Sbjct: 22 IDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVDSGRILIDGEDVVPLPPQKRGIAMVF 81
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YALFP+M V +NVAFGL ++K+P E++++V E +ELV L + R P QLSGGQ QR
Sbjct: 82 QSYALFPNMTVQQNVAFGLRMQKVPAAELKQRVAEAIELVELGEYAARYPHQLSGGQCQR 141
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALAR+LV P +LLLDEPLS LDA++R+ LR +I+RIQ+ELG+TT++VTHDQEEA+ +S
Sbjct: 142 VALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRRIQQELGLTTVFVTHDQEEALTLS 201
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVD 259
DRI +MN GRI Q G LY P+ F A F+G NLL + + LG+ C
Sbjct: 202 DRIVLMNAGRIVQSGDAETLYTAPENAFAAGFIGNYNLLDAEQASRL--LGQSCAQ---- 255
Query: 260 GPVKVFFRPESVEIG---KEGVEAEVMDYEILPGRIRFRLSVQGKEIIAE 306
+V RPES+ +G EGV A V + +L IR+R+ G E+ +
Sbjct: 256 ---QVAIRPESLRLGNEPSEGVPALVRSHSLLGNVIRYRVEAAGVELTVD 302
>sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|72468|pir||GRYCS7
sulfate transport protein - Synechococcus sp. (strain
PCC 7942) >gi|142152|gb|AAA22056.1| (J04512) sulfate
permease (gtg start codon) [Synechococcus PCC6301]
Length = 344
Score = 268 bits (679), Expect = 5e-71
Identities = 148/308 (48%), Positives = 205/308 (66%), Gaps = 18/308 (5%)
Query: 2 VRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V +++ V K+F F+ VDL V+ G L+++LGPSG GK+T LR+IAGLE+PD G +
Sbjct: 7 VGIQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIF 66
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
GRD T R IGFVFQ YALF H+ V KN+AFGLE+RK ++++ +V E+LELV
Sbjct: 67 LTGRDATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGLELRKHTKEKVRARVEELLELV 126
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
L G +R P QLSGGQ+QRVALARAL ++P+VLLLDEP LDAKVR+ LR ++++
Sbjct: 127 QLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLRKLHD 186
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
E+ +TT++VTHDQEEAM ++D+I VMN G++EQ+G P E+Y NP T FV F+G N+L
Sbjct: 187 EVHVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEIYDNPATPFVMSFIGPVNVLP 246
Query: 240 LRSTNGVACLGELCFNVGVDGP-VKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSV 298
+++ + G G+D P +VF RP +EI + + E +P RI R+
Sbjct: 247 --NSSHIFQAG------GLDTPHPEVFLRPHDIEIAIDPIP------ETVPARID-RIVH 291
Query: 299 QGKEIIAE 306
G E+ AE
Sbjct: 292 LGWEVQAE 299
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 268 bits (678), Expect = 6e-71
Identities = 131/242 (54%), Positives = 178/242 (73%), Gaps = 8/242 (3%)
Query: 1 MVRVELRGVEKKFPGFKLRVDL--EVKDGELISILGPSGCGKTTTLRIIAGLERPDKG-- 56
M V+L + K+F DL E+KDGE + +LGPSGCGKTTTLR+IAGLE P +G
Sbjct: 4 MAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQI 63
Query: 57 ----NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
N++ D F+PP R++ VFQ YAL+PHM V+ N+AF L++RK+P++EI+++V
Sbjct: 64 YIEDNLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKRV 123
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
REV E++GL NR P +LSGGQ+QRVAL RA++ P+V L+DEPLSNLDAK+R +R
Sbjct: 124 REVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 183
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
E+K++Q++LG+TT+YVTHDQ EAM + DRIAVMN G ++QVG P E+YY P FVA F+
Sbjct: 184 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFI 243
Query: 233 GT 234
G+
Sbjct: 244 GS 245
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 267 bits (676), Expect = 1e-70
Identities = 134/251 (53%), Positives = 180/251 (71%), Gaps = 8/251 (3%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+L V KKF F + LE+KDGE + +LGPSGCGKTTTLR+IAGLE P G +
Sbjct: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
Query: 59 LFDGRDVT------FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
D + V F+PP R++ VFQ YAL+PHM V+ N+AF L++RK+P++EI+R+V
Sbjct: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
REV E++GL R P +LSGGQ+QRVAL RA++ P+V L+DEPLSNLDAK+R +R
Sbjct: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
E+K++Q++LG+TT+YVTHDQ EAM + DRIAVMN G ++QVG P E+Y P FVA F+
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
Query: 233 GTGNLLKLRST 243
G+ + L +T
Sbjct: 241 GSPPMNFLTAT 251
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 267 bits (675), Expect = 1e-70
Identities = 134/273 (49%), Positives = 192/273 (70%), Gaps = 5/273 (1%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ L G+ K F G ++ ++L+V GE ++ILGPSGCGKTT LR+IAG E D+G +L D
Sbjct: 18 IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
+DVT +P R++ VFQ YALFPHM VF+NVAFGL ++K+P+ EIE +V E L +V L
Sbjct: 78 DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
R P QLSGGQQQR+A+ARA+V +P+VLLLDE LS LD K+R+ ++ E+K++Q++L
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
GIT ++VTHDQEEA+++SDRI VM G+IEQ G P E+Y +PK FVA+F+G N+ +
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257
Query: 242 STNGVACLGELCFNVGVDGPVKVFFRPESVEIG 274
+ + + E V ++G + + + V+ G
Sbjct: 258 TIDRI---DEKRIRVDIEGIESIVYYEDEVKAG 287
>dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-binding protein in
thrW-argF intergenic region. [Escherichia coli]
Length = 348
Score = 267 bits (675), Expect = 1e-70
Identities = 136/335 (40%), Positives = 214/335 (63%), Gaps = 10/335 (2%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
VELR V K+F + ++L + G+++++LGPSGCGKTT LR++AGLE+P +G + D
Sbjct: 7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 66
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G DVT R+I VFQ YALFPHM++ +NV +GL++ +PR E++ +V+E L +V L
Sbjct: 67 GEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDL 126
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+GFE+R +Q+SGGQQQRVA RAL+++P+VLL DEPLSNLDA +R S+R +I+ +QK+
Sbjct: 127 EGFEDRFVDQISGGQQQRVAWPRALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQF 186
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
IT++YVTHDQ EA A+SD + VMN G I Q+G P +LY P + F+A F+G NL
Sbjct: 187 DITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPAT 246
Query: 242 STNGVACLG----ELCFNVGVDGPVKVFFRPESVEIGKEGVEAE---VMDYEILPGRIRF 294
++G + + G G V RPE++ + G E++ + + +
Sbjct: 247 FSDGYVDIYGYHLPRPLHFGTQGEGMVGVRPEAITLSDRGEESQRCVIRHVAYMGPQYEV 306
Query: 295 RLSVQGKEIIAEDSLARYE-EIPKKVYIKVKRFSL 328
+ G+EI+ + + R + ++ ++ Y+++ + +
Sbjct: 307 TVEWHGQEILLQVNATRLQPDVGEQYYLEIHPYGM 341
>pir||F72510 probable multiple sugar-binding transport ATP-binding protein
APE2060 - Aeropyrum pernix (strain K1)
>gi|5105758|dbj|BAA81070.1| (AP000063) 388aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 388
Score = 266 bits (674), Expect = 2e-70
Identities = 153/323 (47%), Positives = 203/323 (62%), Gaps = 23/323 (7%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
++L GV K F V+L ++D E +SILGPSG GKTT L +IAG+ +P +G + F+
Sbjct: 1 MKLEGVWKVFGNVVAVRDVNLYIEDKEFVSILGPSGSGKTTLLYLIAGIYKPSRGRIYFN 60
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
DVT LPP RNIG VFQ+YAL+PHM V++N+AF L +R I+ KV V +L+G+
Sbjct: 61 DVDVTDLPPNKRNIGLVFQNYALYPHMTVYENIAFPLRLRNFGEPAIKEKVLSVAKLLGI 120
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+G +R P QLSGGQQQRVALARALV EPEVLLLDEPLSNLDA +R +R E+K++QKEL
Sbjct: 121 EGLLDRYPAQLSGGQQQRVALARALVKEPEVLLLDEPLSNLDALLRIKIRSELKKLQKEL 180
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT--GNLLK 239
GIT +YVTHDQ EA+A++DRIA++ G I+QVG+P ++YY P+ FVA F+GT NL+
Sbjct: 181 GITAIYVTHDQSEALAMADRIAIIASGVIQQVGKPWDVYYKPRNVFVASFIGTPPANLVS 240
Query: 240 LRSTNGVACL-----GELC--------FNVGVDGPVKVFFRPESVEIGKE------GVEA 280
+ + CL G C V + FRPE + + +EA
Sbjct: 241 VPLDSSRRCLLLPGGGRYCPPRRIAEKLAAVKTNSVILGFRPEVAVLSESPLGDYVSMEA 300
Query: 281 EVMDYEILPGRIRFRLSVQGKEI 303
EV E L L V G ++
Sbjct: 301 EVYTVETLGRENIVTLLVNGSQV 323
>pir||B83571 probable ATP-binding component of ABC transporter PA0603 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946476|gb|AAG03992.1|AE004496_8 (AE004496) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 369
Score = 266 bits (672), Expect = 3e-70
Identities = 145/322 (45%), Positives = 203/322 (63%), Gaps = 21/322 (6%)
Query: 2 VRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
V V RGV+K + G L V +L+++ GE +++LGPSG GKTT+L ++AG E P G +
Sbjct: 9 VLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEI 68
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
L GR + +PP+ R+IG VFQ+YALFPHM V +N+AF L VR + + +++ +V+ L +
Sbjct: 69 LLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSM 128
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
V L F R P QLSGGQQQRVALARALV EP+++L+DEPL LD ++RE ++MEIK +
Sbjct: 129 VQLDAFAGRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLH 188
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
+ LG+T +YVTHDQ EA+ +SDR+AV + G I+Q+ P LY P+ FVA F+G N L
Sbjct: 189 QRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVANFIGENNRL 248
Query: 239 --KLRSTNGVACL-----GE----LCFNVGVDG-PVKVFFRPESVEIGKEG------VEA 280
+L S +G C+ GE L NVG G PV + RPE V +
Sbjct: 249 SGQLLSCDGERCVVGLPRGEKVEALAVNVGQPGEPVTLSIRPERVRLNGASESCVNRFSG 308
Query: 281 EVMDYEILPGRIRFRLSVQGKE 302
V ++ L +R RL V G++
Sbjct: 309 RVAEFVYLGDHVRVRLEVCGRD 330
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 265 bits (670), Expect = 5e-70
Identities = 146/293 (49%), Positives = 190/293 (64%), Gaps = 11/293 (3%)
Query: 1 MVRVELRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M VEL+G+ + F VD + + DGE +++GPSGCGKTTTLR+IAG E PD+G
Sbjct: 1 MTSVELQGLVRAFGSTTTAVDDVSVSIADGEFFTLVGPSGCGKTTTLRLIAGFETPDRGE 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPR-KEIERKVREVL 116
++F R V+ +PP R++G VFQ YALFPHM V +NVA+GL R+ P E +V E+L
Sbjct: 61 IVFGDRSVSGVPPEDRDVGIVFQSYALFPHMTVRENVAYGLRFREPPGGASTEERVSELL 120
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
LV L G +R P LSGGQQQRVALARAL P VLLLDEP+S LDA++R+ LR IK
Sbjct: 121 SLVDLAGTGDREPAALSGGQQQRVALARALAPGPSVLLLDEPMSALDARLRDRLRGTIKE 180
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGN 236
IQ+EL ITT+YVTHDQ EA++ISDR+AVM G + QVG P +Y P + FVA+F+G N
Sbjct: 181 IQRELDITTVYVTHDQAEALSISDRVAVMRDGAVVQVGTPEAVYREPSSRFVAEFVGENN 240
Query: 237 LLK-----LRSTNGVACLGELCFNVG--VDGPVKVFFRPESVEIGKEGVEAEV 282
++ L + + + F V V G V V RPE++ G GV +V
Sbjct: 241 VVSGTAVPLETGGSSVSVNGVTFEVSECVTGDVAVGLRPEALSFGSGGVGFDV 293
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 264 bits (668), Expect = 9e-70
Identities = 129/221 (58%), Positives = 169/221 (76%), Gaps = 6/221 (2%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT------FLPPYSR 73
+ LEVKDGE + +LGPSGCGKTTTLR+IAGLE P +G + R V F+PP R
Sbjct: 22 LSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDRLVADPEKGIFVPPKDR 81
Query: 74 NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLS 133
+I VFQ YAL+PHM V+ N+AF L++RK+PR+EI+++VREV EL+GL NR P +LS
Sbjct: 82 DIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELS 141
Query: 134 GGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQE 193
GGQ+QRVAL RA+V +P+V L+DEPLSNLDAK+R +R E+K++Q++LG+TT+YVTHDQ
Sbjct: 142 GGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQV 201
Query: 194 EAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
EAM + DRIAVMN G ++QVG P E+Y P FVA F+G+
Sbjct: 202 EAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGS 242
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 264 bits (668), Expect = 9e-70
Identities = 142/311 (45%), Positives = 204/311 (64%), Gaps = 13/311 (4%)
Query: 1 MVRVELRGVEKKFPGFKLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
M++VE + K + FKLR + +V++GE ILGPSG GKT L IIAG+ PD+G +L
Sbjct: 1 MLKVE--SISKDYREFKLREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRIL 58
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
G D+T LPP RN ++ Q+YALFPHM VF N+AFGL++RK+PRKE+ RKVREV E +
Sbjct: 59 LRGEDITGLPPEKRNFSYIPQNYALFPHMTVFDNIAFGLKLRKIPRKEVARKVREVAESL 118
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
G+ +R P LSGG+QQRVA+ARALV++PE+LL+DEP +NLD + + L E+KR +K
Sbjct: 119 GIDHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIREMKRWRK 178
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
E G T ++VTH EEA+++ DR+ +M GR+ QVG +++ PK+E VA+FLG N+++
Sbjct: 179 EFGFTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEVARFLGFENIIE 238
Query: 240 LRSTNGVACLGELCFNV--GVDGPVKVFFRPESVEIGKEGV--------EAEVMDYEILP 289
+ + +G+L + V G V+V RPE + I EGV +A V E L
Sbjct: 239 GVANGRILKVGDLRIELPREVWGKVRVGIRPEDITIFMEGVKTSARNVFKARVEGIEDLG 298
Query: 290 GRIRFRLSVQG 300
++ L++ G
Sbjct: 299 ALVKLTLNLGG 309
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 264 bits (667), Expect = 1e-69
Identities = 141/303 (46%), Positives = 198/303 (64%), Gaps = 17/303 (5%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+DL+++ GE S+LGPSGCGKTT LRI+AG E+ D G V+ GRD+T +P + R + VF
Sbjct: 24 IDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQADSGAVVIGGRDMTGIPAHRRPVNTVF 83
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YALFPH++V NVAFGL+ + + E+ ++V +E V + F NR P+QLSGGQ+QR
Sbjct: 84 QSYALFPHLSVADNVAFGLKQKGVRGAELRQRVERAMETVQIGQFGNRKPDQLSGGQRQR 143
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALARA+V +PEVLLLDEPLS LD K+R+ L++E+ +Q++LGIT ++VTHDQEEA+ +S
Sbjct: 144 VALARAIVNQPEVLLLDEPLSALDLKLRKQLQVELSNLQEDLGITFVFVTHDQEEALVMS 203
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--KLRSTNGVACLGELCF--- 254
DRIAVMN GRIEQ+GR +LY P+T FVA FLG+ NLL ++ +G + F
Sbjct: 204 DRIAVMNQGRIEQLGRAEDLYERPRTAFVANFLGSSNLLAGRVAELHGTEATVQTEFGPL 263
Query: 255 ------NVGVDGPVKVFFRPESVEIGKEG------VEAEVMDYEILPGRIRFRLSVQGKE 302
+ V V + RPE + + ++ V A V D ++ L G+
Sbjct: 264 RTLHGAGLSVGQEVTLSIRPEKLRMERDDETEGNEVRARVDDIVYTGAENQYLLEAHGQR 323
Query: 303 IIA 305
++A
Sbjct: 324 LVA 326
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 263 bits (666), Expect = 2e-69
Identities = 143/329 (43%), Positives = 207/329 (62%), Gaps = 16/329 (4%)
Query: 2 VRVELRGVEKKFPGFKLRVDL--EVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V + + V K++ + DL E+K+GE ++LGPSGCGKTT LR+IAG + G +
Sbjct: 3 VSISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGEIK 62
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
FD + +P + RNIG VFQ+YA+FPHM V +NV +GL++RK ++ +++KV E+L +V
Sbjct: 63 FDKDVINNIPAHKRNIGMVFQNYAIFPHMTVRENVEYGLKLRKENKESMKKKVDEMLHVV 122
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
++ +++R+PE+LSGGQQQRVALARA+VI P VLL+DEPLSNLDAK+R +R IK IQ+
Sbjct: 123 KIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAIKDIQR 182
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL-- 237
+GITT+YVTHDQEEA+A+SDRIAVM G I+QVG P+ +Y P FVA F+G NL
Sbjct: 183 HVGITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPYNVFVATFIGHSNLFY 242
Query: 238 --LKLRSTN-------GVACLGELCFNVGVDGPVKVFFRPESVEIGK---EGVEAEVMDY 285
+K+ + G + +V V V RPE + EG++A+++
Sbjct: 243 ATIKIEGNDTYLLFRCGYKLKMDNLLDVKDGDEVVVGIRPEEFFVNSENDEGIKAKILSK 302
Query: 286 EILPGRIRFRLSVQGKEIIAEDSLARYEE 314
L + L E++ + Y +
Sbjct: 303 TFLGKYTNYFLHFNDNEVVPDQPSIEYSQ 331
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 263 bits (665), Expect = 2e-69
Identities = 128/221 (57%), Positives = 169/221 (75%), Gaps = 6/221 (2%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT------FLPPYSR 73
+ LEVKDGE + +LGPSGCGKTTTLR+IAGLE P +G + + V F+PP R
Sbjct: 22 MSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDR 81
Query: 74 NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLS 133
+I VFQ YAL+PHM V+ N+AF L++RK+PR+EI+++VREV EL+GL NR P +LS
Sbjct: 82 DIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELS 141
Query: 134 GGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQE 193
GGQ+QRVAL RA+V +P+V L+DEPLSNLDAK+R +R E+K++Q++LG+TT+YVTHDQ
Sbjct: 142 GGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQV 201
Query: 194 EAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
EAM + DRIAVMN G ++QVG P E+Y P FVA F+G+
Sbjct: 202 EAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGS 242
>pir||T35802 probable polyamine ABC-transporter ATP-binding protein -
Streptomyces coelicolor >gi|3413309|emb|CAA20221.1|
(AL031225) putative polyamine ABC-transporter
ATP-binding p rotein [Streptomyces coelicolor A3(2)]
Length = 397
Score = 263 bits (665), Expect = 2e-69
Identities = 132/238 (55%), Positives = 174/238 (72%), Gaps = 4/238 (1%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V L G+ K + F +DL V G ++LG SGCGKTTTLR+IAGLE P G V
Sbjct: 19 VRLAGISKTYGSFTAVHPLDLTVPQGSFFALLGASGCGKTTTLRMIAGLEEPSGGTVHLG 78
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
+DVT LPPY R + VFQ YALFPH+++++NVAFGL R + K ++++V E+L+LV L
Sbjct: 79 DQDVTALPPYKRPVNTVFQSYALFPHLDIYENVAFGLRRRGI--KSVKKQVGEMLDLVQL 136
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ P QLSGGQQQRVA+ARAL+ P+VLLLDEPL LD K+R +++E+KRIQ E+
Sbjct: 137 GEQARKKPHQLSGGQQQRVAVARALINHPKVLLLDEPLGALDLKLRRQMQLELKRIQTEV 196
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
GIT ++VTHDQEEAM ++D++AVMN GR+EQ+G P +LY NP+T FVA FLGT NL++
Sbjct: 197 GITFVHVTHDQEEAMTMADQVAVMNAGRVEQLGAPADLYENPRTTFVANFLGTSNLIE 254
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 262 bits (663), Expect = 4e-69
Identities = 142/289 (49%), Positives = 195/289 (67%), Gaps = 15/289 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M RV L+ V K F +++LEVKDGE + +LGPSGCGK+TTLR+IAGLE P +G +
Sbjct: 1 MARVLLKNVTKVFGDVVAVNKLNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGEI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ V + P RN+ VFQ+YAL+PHM VF N+ F L++ +P+ E +KV+E+ +
Sbjct: 61 WIGDKLVNDIDPTKRNVAMVFQNYALYPHMTVFGNIEFPLKMAGVPKSERIKKVKEIADF 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR-I 177
+G+ NR P +LSGGQQQRVALARALV EPEV LLDEPLSNLDAK+R +R E+K+ +
Sbjct: 121 LGIGDLLNRKPSELSGGQQQRVALARALVREPEVFLLDEPLSNLDAKIRTQMRFELKKLL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT--- 234
+L ITT+YVTHDQ EAM ++DRIAVMN G I+QVG P E++Y PK FVA F+G+
Sbjct: 181 SYDLKITTIYVTHDQVEAMTMADRIAVMNKGVIQQVGTPDEIFYKPKNTFVATFVGSPQM 240
Query: 235 ----GNLLKLRSTNGVACLGELCF----NVGVDGPVKVFFRPESVEIGK 275
G ++K + + GE ++ ++G V + FRP+ VE+ +
Sbjct: 241 NLIEGEIIK-KDGKVIFDCGEFSLRLPEDLNIEGRVILGFRPQHVEVSE 288
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 261 bits (660), Expect = 8e-69
Identities = 133/270 (49%), Positives = 186/270 (68%), Gaps = 9/270 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+DL +K G ++++LGPSGCGKTT LR++AGLE P G + DG DVT +R+I VF
Sbjct: 25 LDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVF 84
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YALFPHM++ NV +GL+++ + ++E ++V+E LELV L GFE+R +Q+SGGQQQR
Sbjct: 85 QSYALFPHMSIGDNVGYGLKMQGIGKEERAQRVKEALELVDLAGFEDRFVDQISGGQQQR 144
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALARALV++P+VLL DEPLSNLDA +R S+R +I+ +Q+ LGIT++YVTHDQ EA A+S
Sbjct: 145 VALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQRLGITSLYVTHDQTEAFAVS 204
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELC------ 253
D + VMN G+I Q ELY P + F+A F+G ++ + NGVA +
Sbjct: 205 DEVIVMNKGKIMQKAPAKELYLRPNSLFLANFMGESSIFDGKLENGVADINGYSVPLKDA 264
Query: 254 --FNVGVDGPVKVFFRPESVEIGKEGVEAE 281
FN+ DG V RPE++ + EG +A+
Sbjct: 265 AQFNL-PDGECLVGIRPEAIYLAAEGSDAQ 293
>pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA0687 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658105|gb|AAF96587.1| (AE004398) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 351
Score = 260 bits (658), Expect = 1e-68
Identities = 135/287 (47%), Positives = 193/287 (67%), Gaps = 9/287 (3%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V L+ + K+F + +DLE+K G L+++LGPSGCGKTT LR++AGLE+P G + D
Sbjct: 7 VVLKNICKRFGSNTVIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFID 66
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G DVT R+I VFQ YALFPHM++++NVA+GL++ KLP +E+ ++V E L++V L
Sbjct: 67 GEDVTERSIQQRDICMVFQSYALFPHMSLYENVAYGLKMLKLPSEEVRQRVDEALKIVDL 126
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+G R +Q+SGGQQQRVALARALV++P+VLL DEPLSNLDA +R S+R I+ +Q+
Sbjct: 127 EGMGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRELQQRF 186
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
IT++YVTHDQ EA A+SD + VM G I Q+G P ELY PK+ F+A F+G N+ +
Sbjct: 187 DITSLYVTHDQAEAFAVSDTVIVMKQGDIMQIGTPQELYKAPKSMFMANFMGEANMFQGH 246
Query: 242 ------STNGVACLGEL-CFNVGVDGPVKVFFRPESVEIGKEGVEAE 281
NG A +L +G ++ RPE++ + +G E++
Sbjct: 247 FDGQQIHINGYAIDADLEVTRDKPNGEYQIGVRPEAITLHTQGSESQ 293
>sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|96440|pir||A40840 spermidine/putrescine transport
protein potA [validated] - Escherichia coli
>gi|147326|gb|AAC37038.1| (M64519) transport protein
[Escherichia coli] >gi|1651555|dbj|BAA35948.1| (D90748)
Spermidine/putrescine transport protein A [Escherichia
coli] >gi|1787370|gb|AAC74210.1| (AE000212) ATP-binding
component of spermidine/putrescine transport
[Escherichia coli K12]
Length = 378
Score = 259 bits (656), Expect = 2e-68
Identities = 137/284 (48%), Positives = 185/284 (64%), Gaps = 14/284 (4%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V+L G+ K F G ++ ++DL + +GE +++LGPSGCGKTT LR+IAGLE D G ++ D
Sbjct: 18 VQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLD 77
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
D+T +P +R + VFQ YALFPHM VF+NVAFGL ++K P EI +V E L +V L
Sbjct: 78 NEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQL 137
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ F R P QLSGGQQQRVA+ARA+V +P +LLLDE LS LD K+R+ ++ E+K +Q++L
Sbjct: 138 ETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKL 197
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL- 240
GIT ++VTHDQEEA+ +SDRI VM GRIEQ G P E+Y PK FVA F+G N+
Sbjct: 198 GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNAT 257
Query: 241 -----------RSTNGVACLGELCFNVGVDGPVKVFFRPESVEI 273
+ G C + F V + V RPE + +
Sbjct: 258 VIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRV 301
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 259 bits (656), Expect = 2e-68
Identities = 129/277 (46%), Positives = 184/277 (65%), Gaps = 7/277 (2%)
Query: 4 VELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+E GVEK +PG V ++++GE++ +LGPSG GKTT LR+IAGLERP KG+V
Sbjct: 3 IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWI 62
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
G+ VT LPP RN+G VFQ+YALF HM V+ NV+FGL +++P+ E++ +VRE+L +
Sbjct: 63 GGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMR 122
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L+ + NR P +LSGGQQQRVALARAL P+VLL DEP + +D ++R LR ++++ E
Sbjct: 123 LESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDE 182
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
+G+T+++VTHDQEEA+ ++DR+ V++ G +EQ G P E+Y P T FVA F+G N+
Sbjct: 183 MGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTR 242
Query: 241 RSTNGVACLGELCF----NVGVDGPVKVFFRPESVEI 273
NG + V V V RP+ VE+
Sbjct: 243 AVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVEL 279
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 259 bits (655), Expect = 3e-68
Identities = 145/327 (44%), Positives = 209/327 (63%), Gaps = 24/327 (7%)
Query: 1 MVRVELRGVEKKFPGFKLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
M+RVE V K + FKLR + +VK E ILGPSG GKT L IIAG+ PD+G ++
Sbjct: 1 MLRVE--SVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
+G DVT PP RN+ ++ QDYALFPHM V+ N+AFGL++R++ R+EI+RKV+E+ +++
Sbjct: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
G++ +R P LSGG++QRVA+ARALVIEPE+LLLDEP +NLD + + E+K +K
Sbjct: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
ELG T+++VTH EEA+++ DR+ VM GR+ QVG E++ NP E VA+FLG N+++
Sbjct: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
Query: 240 ------LRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVE--------AEVMDY 285
+ NGV ++ + V+G V++ RPE + + E V+ AEV+
Sbjct: 239 GVAKGNILEANGV----KITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGI 294
Query: 286 EILPGRIRFRLSVQG---KEIIAEDSL 309
E L +R L + G K I SL
Sbjct: 295 EELGPLVRVNLKIGGITLKAFITRSSL 321
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 258 bits (653), Expect = 5e-68
Identities = 126/238 (52%), Positives = 171/238 (70%), Gaps = 2/238 (0%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V ++ V K F F++ V L++K GE SILGPSGCGKTT LR+IAG E + G+VL D
Sbjct: 6 VSIKNVSKFFDDFQVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEGVESGDVLLD 65
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G+ + LPP R + +FQ+YALFPH+ VF+N+AF L+++KL EI ++V E+L L+ +
Sbjct: 66 GKSILNLPPNKRPVNIIFQNYALFPHLTVFENIAFPLKLKKLSENEINQRVNELLSLIRM 125
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ +MP QLSGGQ+QRVA+ARAL EP VLLLDEPLS LDAK+R+ L +E+ + +
Sbjct: 126 EEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVELDNLHDRV 185
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
GIT +YVTHDQ EA+++SDR+A+MN G I QVG P E+Y +P F A F+G NL+K
Sbjct: 186 GITFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEVYESPVNVFAATFIGETNLMK 243
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 256 bits (646), Expect = 4e-67
Identities = 132/284 (46%), Positives = 190/284 (66%), Gaps = 14/284 (4%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ELR ++K + + D L + +GE ++ILGPSGCGKTT LR++AGLE D G+++ D
Sbjct: 20 IELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIILD 79
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G D+T +P R+I VFQ YALFPHM +F+NVAFGL ++K+P +EI+ +V E L +V L
Sbjct: 80 GEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQL 139
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ +R P QLSGGQQQR+A+ARA+V +P+VLLLDE LS LD K+R+ ++ E+K +Q++L
Sbjct: 140 EEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQELKMLQRQL 199
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK-- 239
GIT ++VTHDQEEA+ +SDRI ++ G+I Q G P E+Y +P FVA+F+G N+ +
Sbjct: 200 GITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEDPANLFVARFIGEINVFEAT 259
Query: 240 ----------LRSTNGVACLGELCFNVGVDGPVKVFFRPESVEI 273
L + G C V D ++V RPE + I
Sbjct: 260 VIERKSEQVVLANVEGRICDIYTDMPVEKDQKLQVLLRPEDIVI 303
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 256 bits (646), Expect = 4e-67
Identities = 136/285 (47%), Positives = 193/285 (67%), Gaps = 16/285 (5%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ELR + K + + D L + +GE ++ILGPSGCGKTT LR++AGLE D GN++ D
Sbjct: 11 IELRSITKSYGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIILD 70
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G D+T +P R++ VFQ YALFPHM +F+NVAFGL ++K+P EI+ +V E L +V L
Sbjct: 71 GEDITNVPAEKRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPEAEIKPRVLEALRMVQL 130
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ +R P QLSGGQQQR+A+ARA+V +P+VLLLDE LS LD K+R+ ++ E+K +Q++L
Sbjct: 131 EEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYELKVLQRQL 190
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGN----- 236
GIT ++VTHDQEEA+ +SDRI ++ G+I Q G P E+Y P FVA+F+G N
Sbjct: 191 GITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEEPANLFVARFIGEINVFDAT 250
Query: 237 LLKLRSTNGVAC--LGELCFNVGVDGPVK------VFFRPESVEI 273
+++ +S N V G +C ++ D PVK V RPE + I
Sbjct: 251 VIERKSENVVLANVEGRVC-DIYTDIPVKKDQQLQVLLRPEDIVI 294
>gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas putida]
Length = 282
Score = 255 bits (645), Expect = 5e-67
Identities = 138/276 (50%), Positives = 193/276 (69%), Gaps = 9/276 (3%)
Query: 3 RVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
++++R + K+F F V L++ GEL+ +LGPSGCGKTT LR IAGLER D+G +
Sbjct: 9 QMKVRNIHKRFGAFTALNDVSLDIAAGELVCLLGPSGCGKTTLLRCIAGLERQDRGTLYI 68
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
RD++ LPP +R+ G +FQ YALFP++ V N+A+GL R++ ++V E+LELVG
Sbjct: 69 GERDISELPPQARDYGILFQSYALFPNLTVEANIAYGLTGSG--REQARQRVTEMLELVG 126
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L G E + P QLSGGQQQRVALARAL P +LLLDEP+S LDA+VRE L E++++Q++
Sbjct: 127 LAGSEKKYPGQLSGGQQQRVALARALAPSPSLLLLDEPMSALDARVREHLCTELRQLQRQ 186
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
LGITT+ VTH+Q+EAM ++DRIAVMN G++EQ P E+Y P T FVA+F+G GN L
Sbjct: 187 LGITTLMVTHNQDEAMLMADRIAVMNNGQVEQYATPQEIYDQPATPFVAEFVGQGNWLPF 246
Query: 241 -RSTNGVACLGELCFNV--GVDGPV--KVFFRPESV 271
RS++ A +G + + G P ++F RPE++
Sbjct: 247 QRSSDSHAQVGGMNMRLAPGSARPSSGRLFCRPEAI 282
>pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H37RV)
>gi|1655663|emb|CAB03729.1| (Z81368) cysA [Mycobacterium
tuberculosis]
Length = 351
Score = 255 bits (644), Expect = 6e-67
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
VD V G L ++LGPSG GK+T LR IAGL++PD G + +GRDVT +PP R IGFVF
Sbjct: 23 VDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVPPQRRGIGFVF 82
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YA F H+ V NVAFGL++RK P+ EI+ KV +L++VGL GF++R P QLSGGQ+QR
Sbjct: 83 QHYAAFKHLTVRDNVAFGLKIRKRPKAEIKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQR 142
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
+ALARAL ++PEVLLLDEP LDAKVRE LR ++R+ E+ +TT+ VTHDQ EA+ ++
Sbjct: 143 MALARALAVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEALDVA 202
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
DRIAV++ GRIEQVG P ++Y P FV FLG + L
Sbjct: 203 DRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVSTL 241
>sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN Y4FO
>gi|2182398|gb|AAB91671.1| (AE000073) Y4fO [Rhizobium
sp. NGR234]
Length = 339
Score = 254 bits (643), Expect = 8e-67
Identities = 143/305 (46%), Positives = 189/305 (61%), Gaps = 12/305 (3%)
Query: 4 VELRGVEKKFPGFKLRVDL--EVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ L ++ FPG + DL +V DG +S+LGPSG GK++ LR IAGL G VL +
Sbjct: 13 LSLNKLDVGFPGMTVVRDLNLDVADGAFVSLLGPSGSGKSSVLRTIAGLLPALGGRVLLE 72
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G+D+T LPP RN+G VFQ+YALFP M+ F+N+AF L V K + E+ER+V EV E+ G+
Sbjct: 73 GQDITALPPERRNVGIVFQNYALFPTMSAFENIAFALRVAKKSKAEVERRVGEVAEMAGI 132
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
++ P +SGGQQQRVA+ARALV VLL DEPLSNLDAKVR ++R EIKR+Q EL
Sbjct: 133 SDQLDKKPANMSGGQQQRVAIARALVTGSRVLLFDEPLSNLDAKVRAAMRKEIKRLQSEL 192
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
G T ++VTHDQE+A+ +SD I V+N G+IEQ+G LY P T F+ +F+G N L
Sbjct: 193 GFTAIFVTHDQEDALTMSDLIVVLNHGKIEQIGDGRTLYRKPATPFICEFIGVSNELAPP 252
Query: 242 STNGVACLGELCFNVGVDGPVKVFFRPESVEIGK-EGVEAEVMDYEILPGRIRFRLSVQG 300
+ +G D + F R E V +G GV A V E L R L V+G
Sbjct: 253 LAARL---------LGYDVKGRSFLRHEDVLLGAVAGVPARVNHVEFLGAHSRVDLEVEG 303
Query: 301 KEIIA 305
+ A
Sbjct: 304 HALSA 308
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 254 bits (642), Expect = 1e-66
Identities = 136/280 (48%), Positives = 186/280 (65%), Gaps = 5/280 (1%)
Query: 6 LRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGR 63
+ V K+F F D LEV DG+L+++LGPSG GK+T LR IAGLE PD+G ++ +G+
Sbjct: 5 INNVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQ 64
Query: 64 DVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKG 123
D T + RNIGFVFQ YALF H+ + +N+AFGLE+RK P + + +V E+L L+ L+G
Sbjct: 65 DATHVDIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSLIQLEG 124
Query: 124 FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGI 183
NR P QLSGGQ+QRVALARAL ++P+VLLLDEP LDAKVR+ LR ++++ E+ +
Sbjct: 125 LGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLHDEVHL 184
Query: 184 TTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL-KLRS 242
T+++VTHDQEEAM ++D I VM+ G+IEQVG E+Y +P + FV F+G N+L + S
Sbjct: 185 TSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEIYEHPASPFVMGFIGEVNVLPRNAS 244
Query: 243 TNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEV 282
N G P VF RP E+ E +A V
Sbjct: 245 LFNYHAFEPHSSNNGHQEP--VFVRPHDFELLTEADDASV 282
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 253 bits (640), Expect = 2e-66
Identities = 152/348 (43%), Positives = 214/348 (60%), Gaps = 24/348 (6%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ ++ V K F F+ D L ++ GEL+++LGPSG GKT+ LRIIAGLE D+G++ F
Sbjct: 3 IVIQNVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFH 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVR----KLPRKEIERKVREVLE 117
VT SR +GFVFQ YALFPHM V N+++GL V+ + +KEI KVRE+L
Sbjct: 63 KDKVTQTHAASRQVGFVFQHYALFPHMTVADNISYGLRVKPRKERPSKKEIAEKVRELLA 122
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
LV L+G ++R P QLSGGQ+QR+ALARAL +EP+VLLLDEP LDAKVR+ LR ++++
Sbjct: 123 LVKLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRKWLRKL 182
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
E +T+++VTHDQEEA+ +SDR+ VMN G+IEQVG P E+Y PK+ FV FLG N+
Sbjct: 183 HNEFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEVYEQPKSPFVYDFLGNVNV 242
Query: 238 LKLRSTNGVACLGELCFNVGV------DGPVKVFFRPESVEIG----KEGVEAEVMDYEI 287
R G L + D V+ RP +EI K+ + A V+++
Sbjct: 243 FTGRVKQGFVQLDKHQLKTPTISKDIHDQEAVVYTRPHHMEISRKKQKDAIPA-VIEHIH 301
Query: 288 LPGRIRF-RLSVQGKEIIAEDSLA--RYEEIPKK----VYIKVKRFSL 328
+ G I F L+ + E + + LA R+ E+ K V++ K +L
Sbjct: 302 MVGPIAFLELNWKDDEEVLQVELAKDRFHELDLKKGETVFVVPKNLTL 349
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 253 bits (639), Expect = 2e-66
Identities = 143/315 (45%), Positives = 198/315 (62%), Gaps = 28/315 (8%)
Query: 4 VELRGVEKKF------PGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
V +R V K + P RVDL+++D E ++LGPSGCGKTT LR+IAG E P +G
Sbjct: 12 VSIRAVRKVYGDPESGPVALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGE 71
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRK----EIERKVR 113
+L G ++ PP+ R + VFQ YALFPHM++ +N+AFGLE R L R EI +VR
Sbjct: 72 ILLYGENIAARPPFERPVNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAEIAERVR 131
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
E+L LV ++ F +R P QLSGGQQQRVALARAL +P VLLLDEPLS LD K+R+++R E
Sbjct: 132 EMLALVQMERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQAMREE 191
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
+K IQ + GIT ++VTHDQEEA+ +SDRIAV++ G+++QVG P E+Y P FVA F+G
Sbjct: 192 LKAIQAKTGITFIFVTHDQEEALTMSDRIAVLSEGQVQQVGPPEEIYERPGNRFVADFIG 251
Query: 234 TGNLLKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIR 293
N ++ EL + DGP+ ++ P G E EA D R+
Sbjct: 252 ETNFIE----------AEL---LQRDGPLALYRGP-----GGEAFEAAARDGLAAGARVC 293
Query: 294 FRLSVQGKEIIAEDS 308
+ + +++A ++
Sbjct: 294 LSIRPERLDLLAANT 308
>pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106344|gb|AAF84156.1|AE003966_17 (AE003966) sulfate
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 348
Score = 252 bits (638), Expect = 3e-66
Identities = 143/307 (46%), Positives = 191/307 (61%), Gaps = 11/307 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+DL+++ GEL+++LGPSG GKTT LRIIAGLE D G VLF D T + +R +GFVF
Sbjct: 21 IDLDIRQGELLALLGPSGSGKTTLLRIIAGLEHADAGRVLFGDEDATMMSVQARRVGFVF 80
Query: 80 QDYALFPHMNVFKNVAFGLEVRK----LPRKEIERKVREVLELVGLKGFENRMPEQLSGG 135
Q YALF HM+V++NVAFGL VR+ P +I +V E+L LV L G E R P QLSGG
Sbjct: 81 QHYALFKHMSVYENVAFGLRVRRGKARWPESQISARVFELLSLVQLDGLEQRYPMQLSGG 140
Query: 136 QQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEA 195
Q+QRVALARAL IEP VLLLDEP LDA+VR LR ++ I G+TT++VTHDQEEA
Sbjct: 141 QRQRVALARALAIEPRVLLLDEPFGALDAQVRRDLRRWLREIHDRTGLTTVFVTHDQEEA 200
Query: 196 MAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK-LRSTNGVACLGELCF 254
+ ++DR+A++N GRIEQV P E+Y P + FV F+G N L +G+ G +
Sbjct: 201 LELADRVAILNQGRIEQVASPAEVYNRPSSPFVYSFVGAVNRLPGCVGADGLEVAGIVLS 260
Query: 255 ---NVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPG---RIRFRLSVQGKEIIAEDS 308
+ G V ++ RPE + + + ++ + G R+R RL E+ E S
Sbjct: 261 CPPQLSGWGAVDLYVRPEDLVLDAQEGWLAIVLWSQRSGPRMRVRARLEHSAHEVEIELS 320
Query: 309 LARYEEI 315
A E +
Sbjct: 321 SATDEYV 327
>gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens]
Length = 367
Score = 250 bits (632), Expect = 2e-65
Identities = 131/294 (44%), Positives = 187/294 (63%), Gaps = 17/294 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++++ ++K F GF + +DLEV D E + +GPSGCGK+T LR+IAGLE +G +
Sbjct: 1 MANLKIKNLQKGFEGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSEGTI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
DGRD+T + P R++ VFQ YAL+PHM+V KN++F L++ + ++ +E KV E +
Sbjct: 61 ELDGRDITEVTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAGVDKQLVESKVNEAARI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L R P+QLSGGQ+QRVA+ RA+V P++ L DEPLSNLDA +R +R+E+ R+
Sbjct: 121 LELGPLLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL- 237
KEL T +YVTHDQ EAM ++D++ V+N GRIEQVG PLELY+ P FVA FLGT +
Sbjct: 181 KELQATMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPLELYHQPANLFVAGFLGTPKMG 240
Query: 238 ---LKLRSTNGVACLGEL-----------CFNVGVDGPVKVFFRPESVEIGKEG 277
K+ +G C +L ++ V V + RPE +EI G
Sbjct: 241 FLKGKVTRVDGQGCEVQLDAGTLISLPLSGASLSVGSAVTLGIRPEHLEIASPG 294
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 250 bits (631), Expect = 2e-65
Identities = 133/314 (42%), Positives = 203/314 (64%), Gaps = 15/314 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
++L + +GE ILGPSG GK+T LRIIAGLE+ D G++ D ++T PP R++ VF
Sbjct: 28 INLTINNGEFFVILGPSGSGKSTMLRIIAGLEKVDSGHIFLDEYEITDFPPKDRDMAMVF 87
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YAL+P M V+ N+AF L+++K+ ++EI+ +VREV +L+ ++G N P Q+SGGQ+QR
Sbjct: 88 QNYALYPFMTVYDNIAFPLKIQKISKQEIDERVREVAKLLDIEGILNMKPGQISGGQRQR 147
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VAL RA++ P V L+DEPLSNLDAK+R ++R+E+K++ ++LGITT+YVTHDQ EAM ++
Sbjct: 148 VALGRAIIRRPAVFLMDEPLSNLDAKLRGTMRVELKKLHEQLGITTIYVTHDQIEAMTLA 207
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRST------NGVACLGELC 253
DR+ V+N G + QVG P+++Y +P F+A F+G + + T + + + E
Sbjct: 208 DRVGVINRGNLIQVGGPMDVYDSPANTFIAGFVGDPPINFIDGTIVTEGRDKILRINEFK 267
Query: 254 FNVGVDGP-----VKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSV---QGKEIIA 305
++G + P V V RPE + G EG AE+ + L GR R + G I+
Sbjct: 268 LDIGQEFPDNVAEVTVGIRPEDIGEGDEGFVAELEAIQPL-GRRRLEYYIVKNTGTRIVR 326
Query: 306 EDSLARYEEIPKKV 319
SL + I ++V
Sbjct: 327 ATSLLQERRIGEEV 340
>gi|11466425 probable transport protein [Mesostigma viride]
>gi|7259568|gb|AAF43869.1|AF166114_81 (AF166114)
probable transport protein [Mesostigma viride]
Length = 348
Score = 250 bits (631), Expect = 2e-65
Identities = 132/275 (48%), Positives = 182/275 (66%), Gaps = 3/275 (1%)
Query: 9 VEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT 66
+ KKF F+ ++LE+K G +I++LGPSG GK+T LRIIAGL+ PD+G + G++ +
Sbjct: 8 ISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGKNAS 67
Query: 67 FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFEN 126
SRNIGFVFQ+YALF +M V+ N+AFGLE+R++ +I RKV ++LELV L+ +
Sbjct: 68 GYSIQSRNIGFVFQNYALFKNMTVYDNIAFGLELRRISFNDISRKVNKLLELVQLQNLGH 127
Query: 127 RMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTM 186
R P QLSGGQ+QR+ALARAL IEP+VLLLDEP LDA+VR++LR ++ + + ITT+
Sbjct: 128 RYPAQLSGGQRQRIALARALAIEPKVLLLDEPFGALDARVRKNLRAWLRDLHNKFSITTI 187
Query: 187 YVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGV 246
VTHDQ+EAM I+D I V N GRIEQ+G+P ++Y P T FV LG N + +
Sbjct: 188 IVTHDQQEAMEIADEIVVFNSGRIEQIGKPQDIYDQPATPFVFSLLGYVNKISFDNEIAN 247
Query: 247 ACLGELCFNVGVDGPVKVFF-RPESVEIGKEGVEA 280
L V K F+ RP + I K+ E+
Sbjct: 248 FLLSSFPEKQSVLMQEKQFYIRPHQIVISKQSNES 282
>gi|11467821 probable transport protein [Nephroselmis olivacea]
>gi|5880750|gb|AAD54843.1|AF137379_66 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 343
Score = 249 bits (629), Expect = 4e-65
Identities = 122/230 (53%), Positives = 168/230 (73%), Gaps = 2/230 (0%)
Query: 6 LRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGR 63
+ + K F F+ V+LEVK G L++++GPSG GK+T LR+IAGLER D+G + GR
Sbjct: 5 IENISKTFGTFRALDHVNLEVKAGSLVALVGPSGSGKSTLLRMIAGLERADEGKIWLAGR 64
Query: 64 DVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKG 123
D T+ P R+IGFVFQ+YALF H+NV KN++FGLEVR+ +I +VR++L+L+ L+
Sbjct: 65 DATYAPIQKRHIGFVFQNYALFKHLNVAKNISFGLEVRQANPNQIRSRVRDLLQLIQLEH 124
Query: 124 FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGI 183
+R P QLSGGQ+QRVALARAL +EP+VLLLDEP LDA+VR LR ++ + +E+ +
Sbjct: 125 MADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDARVRRELRSWLRDLHQEMPV 184
Query: 184 TTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
TT++VTHDQ+EAM ++ I V N GR+EQVG P E+Y +P T FV F+G
Sbjct: 185 TTVFVTHDQQEAMEVAHEIVVFNQGRLEQVGSPQEIYDHPATPFVMGFMG 234
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 249 bits (629), Expect = 4e-65
Identities = 135/294 (45%), Positives = 183/294 (61%), Gaps = 18/294 (6%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
V EVKDGE +++LGPSGCGKTTTL ++AG+ +P G + FD V +PP R +G VF
Sbjct: 22 VSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVF 81
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YAL+PHM VF+N+AF L R++ + E+E++V E+ + + +R P QLSGGQQQR
Sbjct: 82 QNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQR 141
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALARALV +P+VLL DEPLSNLDA +R +R EIK +Q+ELGIT++YVTHDQ EAM ++
Sbjct: 142 VALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMA 201
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVD 259
RIAV N G++ Q G P E+Y +PK FVA F+G LR F+V V+
Sbjct: 202 SRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTNFLRD-----------FSVSVE 250
Query: 260 GPVKVFFR-------PESVEIGKEGVEAEVMDYEILPGRIRFRLSVQGKEIIAE 306
+ R PE V++ + V + R R S+ G + E
Sbjct: 251 NKQTILKRDDVIIKLPEPVDVKLKEVVVGIRPEHCRISRERVENSIPGVVYVVE 304
>sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK)
>gi|2338762|gb|AAC45769.1| (AF018073) sorbitol/mannitol
transport ATP-binding transport protein; SmoK
[Rhodobacter sphaeroides]
Length = 332
Score = 249 bits (628), Expect = 5e-65
Identities = 126/278 (45%), Positives = 177/278 (63%), Gaps = 13/278 (4%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++ LR V+K+F + +DL+++DGE + +GPSGCGK+T LR+IAGLE G +
Sbjct: 1 MGKITLRNVQKRFGEAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLEDVSDGQI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ DGRD T +PP R + VFQ YAL+PHM V KN+AF L + K+ +EIER+V ++
Sbjct: 61 MIDGRDATEMPPAKRGLAMVFQSYALYPHMTVKKNIAFPLRMAKMEPQEIERRVSNAAKI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L + +R P QLSGGQ+QRVA+ RA+V EP L DEPLSNLDA +R ++R+EI +
Sbjct: 121 LNLTNYLDRRPGQLSGGQRQRVAIGRAIVREPAAFLFDEPLSNLDAALRVNMRLEITELH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
+ L T +YVTHDQ EAM ++D+I V+N GRIEQVG PL LY NP FVA F+G+ +
Sbjct: 181 QSLETTMIYVTHDQVEAMTMADKIVVLNAGRIEQVGSPLTLYRNPANLFVAGFIGSPKMN 240
Query: 239 KLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKE 276
+ G + RPE +++ +E
Sbjct: 241 LIEGPEAAK-----------HGATTIGIRPEHIDLSRE 267
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 248 bits (626), Expect = 8e-65
Identities = 133/319 (41%), Positives = 199/319 (61%), Gaps = 14/319 (4%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V +R V K++ + ++ ++DGE + ++GPSGCGK+T LR++AGLE G++
Sbjct: 17 MTDVTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGLEEISGGDL 76
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
L + P R++ VFQ+YAL+PHM V +N+ F L++RK PR EI+ +V + +
Sbjct: 77 LMGADVINDRPAKERDMAIVFQNYALYPHMTVAENMGFALKLRKRPRAEIDERVDKAAAI 136
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+GL +R P LSGGQ+QRVA+ RA+V +P+V L DEPLSNLDAK+R +R EIK +
Sbjct: 137 LGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEIKALH 196
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL- 237
+ L ITT+YVTHDQ EAM ++D+I VMN GR+EQ+G PLELY P FVA F+G+ ++
Sbjct: 197 QRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDRPANIFVAGFIGSPSMN 256
Query: 238 ---LKLRSTNGVACLGELCFNVGVDG--------PVKVFFRPESVEIGKEGVEAEVMDYE 286
+ +TNG + +DG V RPE +++G+ G+ AEV+ E
Sbjct: 257 FLPATVAATNGPLLKTPEGVALPIDGGPTLTGRSEVTYGIRPEHLQLGETGIPAEVVVVE 316
Query: 287 ILPGRIRFRLSVQGKEIIA 305
+ ++V G+E++A
Sbjct: 317 PTGSETQLYVTVGGREVVA 335
>sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDCT
>gi|7445684|pir||D64896 probable ABC-type transport
protein b1441 - Escherichia coli
>gi|1742349|dbj|BAA15070.1| (D90783)
Spermidine/putrescine transport ATP-binding protein
PotA. [Escherichia coli] >gi|1742356|dbj|BAA15076.1|
(D90784) Spermidine/putrescine transport ATP-binding
protein PotA. [Escherichia coli]
>gi|1787712|gb|AAC74523.1| (AE000241) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 337
Score = 247 bits (624), Expect = 1e-64
Identities = 137/301 (45%), Positives = 190/301 (62%), Gaps = 15/301 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
V + +KDGE S+LGPSG GKTT LR+IAG E+ G + G+ + LPP+ R++ VF
Sbjct: 23 VSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGKPASNLPPWERDVNTVF 82
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
QDYALFPHM++ NVA+GL V+ + +K+ +E LE V L R P QLSGGQ+QR
Sbjct: 83 QDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQR 142
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VA+ARALV EP VLLLDEPL LD K+RE +++E+K++Q+ LGIT ++VTHDQ EA+++S
Sbjct: 143 VAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQQSLGITFIFVTHDQGEALSMS 202
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVD 259
DR+AV N GRIEQV P +LY P+T FVA F+GT N+ +G+ +LC G+
Sbjct: 203 DRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNVF-----DGLMA-EKLC---GMT 253
Query: 260 GPVKVFFRPESVEIGKEG---VEAEVMDYEILPGRIRFRLSVQGKE-IIAEDSLARYEEI 315
G + RPE + + G + + RF L + G E ++ + EE+
Sbjct: 254 GSFAL--RPEHIRLNTPGELQANGTIQAVQYQGAATRFELKLNGGEKLLVSQANMTGEEL 311
Query: 316 P 316
P
Sbjct: 312 P 312
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 246 bits (622), Expect = 2e-64
Identities = 125/264 (47%), Positives = 181/264 (68%), Gaps = 6/264 (2%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
++L++K E I++LGPSGCGKTT ++I+ G G + F ++++ P R I VF
Sbjct: 26 INLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFSKEISKTSPNKREINTVF 85
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YALFPHMNVF N++FGL ++K P+ I+ KV+ L L+G+ + R +LSGGQ+QR
Sbjct: 86 QNYALFPHMNVFDNISFGLRMKKTPKDIIKEKVKTSLSLIGMPKYAYRNINELSGGQKQR 145
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VA+ARA+V+EP++LLLDEPLS LD K+R+ ++ E+K+IQ++LGIT +YVTHDQEEA+ +S
Sbjct: 146 VAIARAMVMEPKLLLLDEPLSALDLKMRQEMQKELKKIQRQLGITFIYVTHDQEEALTMS 205
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--KLRSTNGVACLGE--LCFN 255
DRI VMN G I Q+G P E+Y PKT+FVA F+G N+ + V+ LG C +
Sbjct: 206 DRIVVMNEGIILQIGTPEEIYNEPKTKFVADFIGESNIFDGTYKKELVVSLLGHEFECLD 265
Query: 256 VGVDG--PVKVFFRPESVEIGKEG 277
G + V + RPE V++ +G
Sbjct: 266 KGFEAEEAVDLVIRPEDVKLLPKG 289
>pir||E70943 probable ABC-type sugar transport protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2896775|emb|CAA17252.1|
(AL021899) hypothetical protein Rv2038c [Mycobacterium
tuberculosis]
Length = 357
Score = 246 bits (622), Expect = 2e-64
Identities = 131/293 (44%), Positives = 186/293 (62%), Gaps = 11/293 (3%)
Query: 1 MVRVELRGVEKKFPGFKL----RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M V +++PG R+DL V DGE + ++GPSGCGKTT+LR++AGLE D G
Sbjct: 1 MASVSFEQATRRYPGTDRPALDRLDLIVGDGEFVVLVGPSGCGKTTSLRMVAGLETLDCG 60
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
+ RDVT + P R++ VFQ+YAL+PHM V +N+ F L+V K+ + EI +V
Sbjct: 61 RIRIGERDVTEVDPKDRDVAMVFQNYALYPHMTVAQNMGFALKVAKIGKAEIRERVLAAA 120
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
+L+ L+ + +R P+ LSGGQ+QRVA+ RA+V P+V L+DEPLSNLDAK+R R +I
Sbjct: 121 KLLDLQSYLDRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRGQTRNQIAA 180
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG- 235
+Q++LG TT+YVTHDQ EAM + DR+AV++ G ++Q P ELY NP FVA F+G+
Sbjct: 181 LQRQLGTTTVYVTHDQVEAMTMGDRVAVLSDGVLQQCASPRELYRNPGNVFVAGFIGSPA 240
Query: 236 -NLLKLRSTNGVACLGELCF-----NVGVDGPVKVFFRPESVEIGKEGVEAEV 282
NL +L + LG+ VG V + RPE +E+G G+E +V
Sbjct: 241 MNLFRLSIADSTVSLGDWQILLPRAVVGTAAEVIIGVRPEHLELGGAGIEMDV 293
>pir||E75564 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457722|gb|AAF09652.1|AE001869_1
(AE001869) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 328
Score = 246 bits (622), Expect = 2e-64
Identities = 134/275 (48%), Positives = 176/275 (63%), Gaps = 3/275 (1%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ LRG+ K F + V LEV+ GE +++LGPSGCGK+T LR +AGLERPD G VL
Sbjct: 8 LSLRGLSKAFGAVQAVGDVSLEVQAGETLALLGPSGCGKSTVLRSVAGLERPDAGQVLVG 67
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
GRDVT LPP +R++G VFQDYALFPH++V NVA+G R R + ++ RE L LVGL
Sbjct: 68 GRDVTALPPEARHLGLVFQDYALFPHLSVLDNVAYGPRRRGSSRPDAAQQAREALALVGL 127
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
E R+P QLSGGQQQRVALARAL +LLLDEPLSNLD K+R LR +++ + +L
Sbjct: 128 SEHERRLPAQLSGGQQQRVALARALATRSPLLLLDEPLSNLDEKLRSELRHDLRGLFGQL 187
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
G + VTHDQ EA+A++ R+AVM G + Q G +L+ P T +VA+FLG N+
Sbjct: 188 GAGVLLVTHDQREALALAHRVAVMRAGHVVQEGAAADLFARPATAWVAEFLGWTNVFAHP 247
Query: 242 STNGVACL-GELCFNVGVDGPVKVFFRPESVEIGK 275
+G A L E +G G + + E G+
Sbjct: 248 QVSGQALLVPESAVQLGAGGELLRVLSRQRSETGE 282
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 246 bits (622), Expect = 2e-64
Identities = 139/314 (44%), Positives = 192/314 (60%), Gaps = 14/314 (4%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+++R V K+F F + L ++ GE + LGPSGCGKTT LR IAGL+ P G + +
Sbjct: 35 LDIRHVVKQFGSFTALKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDLPTSGTIHQN 94
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
+ +TFLPP R+ G VFQ YALFP++ V +N+A GL + + ++ KV + LE++GL
Sbjct: 95 QQAITFLPPEQRDFGIVFQSYALFPNLTVEENIAIGLRNQGMSVRDALEKVEQWLEMIGL 154
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ P QLSGGQQQRVALARAL + P +LLLDEPLS LDAKVR LR EI ++Q++L
Sbjct: 155 ATSAQKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSALDAKVRTHLREEICQLQRKL 214
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--- 238
GITT+ VTHDQEEA+ ++DRI VMN G IEQVG P E+Y P + FVA+F+GT N +
Sbjct: 215 GITTIMVTHDQEEALTMADRIVVMNHGVIEQVGTPQEIYQKPASRFVAEFVGTMNFIPVS 274
Query: 239 -----KLRSTNGVACLGELCFNVGVDG-PVKVFFRPESVEI---GKEGVEAEVMDYEILP 289
+LR + L ++ G + RPE++E+ E + + E L
Sbjct: 275 MASSQQLRIAESLIALPKIENYTPCQGEQFDLAVRPENLELVTRYNEAIPVVIRHLEFLG 334
Query: 290 GRIRFRLSVQGKEI 303
R QG+ +
Sbjct: 335 AFYRVECVFQGERL 348
>pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226117|gb|AAF41290.1| (AE002440) sulfate ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 357
Score = 246 bits (621), Expect = 3e-64
Identities = 132/250 (52%), Positives = 166/250 (65%), Gaps = 10/250 (4%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ ++ + K F F ++L V G+L+S+LGPSGCGKTT LRIIAGLE D GN+LFD
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGNILFD 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE------IERKVREV 115
G+DVT R +GFVFQ YALF HMNVF NVAFGL V LP+ E I KV E+
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTV--LPKSERPSKGQIRAKVEEL 120
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
L+LV L P QLSGGQ+QR+ALARAL +EP++LLLDEP LDAKVR+ LR ++
Sbjct: 121 LKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLR 180
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
I LG+T++ VTHDQEEA+ +SD I VMN G+IEQ G +Y P+ FV +FLG
Sbjct: 181 DIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGET 240
Query: 236 NLLKLRSTNG 245
+ + R G
Sbjct: 241 DAFEGRIEKG 250
>emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycobacterium leprae]
Length = 356
Score = 245 bits (619), Expect = 5e-64
Identities = 124/271 (45%), Positives = 179/271 (65%), Gaps = 7/271 (2%)
Query: 19 RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFV 78
R+DL+V DGE + ++GPSGCGKTT+LR++AGLE D G + RDVT + P R++ V
Sbjct: 23 RLDLDVDDGEFVVVVGPSGCGKTTSLRMVAGLETLDSGCIRIGDRDVTHVDPKDRDVAMV 82
Query: 79 FQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQ 138
FQ+YAL+PHM V +N+ F L++ K+ + EI ++ V +L+ L+ + +R P+ LSGGQ+Q
Sbjct: 83 FQNYALYPHMTVAQNLGFALKISKISKAEIHDRILVVAKLLDLQPYLDRKPKDLSGGQRQ 142
Query: 139 RVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAI 198
RVA+ RA+V P+V L+DEPLSNLDAK+R R +I +Q +LG TT+YVTHDQ EAM +
Sbjct: 143 RVAMGRAIVRRPQVFLMDEPLSNLDAKLRAQTRNQIAELQCQLGTTTVYVTHDQVEAMTM 202
Query: 199 SDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLKLRSTNGVACLGELCFNV 256
DR+AV+ +G ++Q P ELY+ P+ FVA F+G+ NL+ L + LG+ +
Sbjct: 203 GDRVAVLCYGVLQQFATPRELYHKPENVFVAGFIGSPGMNLVTLSIVDSSVLLGDWPIRI 262
Query: 257 -----GVDGPVKVFFRPESVEIGKEGVEAEV 282
V + RPE E+G GVE E+
Sbjct: 263 PREIASAASEVIIGVRPEHFELGSLGVEVEI 293
>pir||T34595 ABC-transporter ATP-binding protein - Streptomyces coelicolor
>gi|2815336|emb|CAA16460.1| (AL021529) SC10A5.28c,
ABC-transporter ATP-binding protein, len : 361 aa;
similar to many eg. Streptomyces reticuli TR:P964 83
(EMBL:Y08921) MSIK PROTEIN involved in in cellobiose and
maltose transport(377 aa), opt: 809 z-score: 1069.1 E():
0 , 40.4% i>
Length = 361
Score = 245 bits (619), Expect = 5e-64
Identities = 134/262 (51%), Positives = 174/262 (66%), Gaps = 10/262 (3%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLE--VKDGELISILGPSGCGKTTTLRIIAGLERPDKGN- 57
M + + ++K F G + D+ V DGE ++LGPSGCGK+TTL +AGLE PD G
Sbjct: 1 MPELVVENIKKSFHGTAVLEDVNFTVADGEFFTLLGPSGCGKSTTLSCVAGLETPDSGTI 60
Query: 58 -----VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
V FDG + +PP RN+G VFQ YAL+PHM V N+A L++RK+ + E R +
Sbjct: 61 RVGDQVFFDGTRRSTVPPEGRNLGLVFQSYALWPHMTVADNLALPLKLRKVTKGEQRRLI 120
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
+VL V + +R P QLSGGQQQRVALAR +V P VLLLDEPLSNLDAK+R+ R+
Sbjct: 121 DDVLTKVDMAHLRDRYPHQLSGGQQQRVALARGIVYSPGVLLLDEPLSNLDAKMRDQARV 180
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+K +Q+E+GITT+YVTHDQ EAM++SDRIAV G ++QVG P E+Y P T VA F+
Sbjct: 181 WLKDLQREVGITTVYVTHDQVEAMSLSDRIAVFMHGHLQQVGTPTEIYETPATPEVAGFI 240
Query: 233 GTGNLLKLR--STNGVACLGEL 252
G NLL+ R +T G A EL
Sbjct: 241 GRCNLLEGRVGATEGGAVQVEL 262
>pir||C83353 probable ATP-binding component of ABC maltose/mannitol transporter
PA2341 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9948377|gb|AAG05729.1|AE004660_5 (AE004660)
probable ATP-binding component of ABC maltose/mannitol
transporter [Pseudomonas aeruginosa]
Length = 370
Score = 243 bits (615), Expect = 2e-63
Identities = 126/294 (42%), Positives = 182/294 (61%), Gaps = 17/294 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +++R ++K F G + +DL+V+D E + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MADLKIRNLQKGFDGQAIIKGIDLDVRDREFVVFVGPSGCGKSTLLRLIAGLEEASGGSI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
DG D+T PP R++ VFQ YAL+PHM V +N++F L++ + ++E+ KV +
Sbjct: 61 ALDGTDITDTPPAKRDLAMVFQTYALYPHMTVRRNLSFALDLAGVDKREVAAKVDAAARI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L+ R P QLSGGQ+QRVA+ RA+V P++ L DEPLSNLDA +R +R+E+ R+
Sbjct: 121 LELQALLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
+EL T +YVTHDQ EAM ++D++ V+N GR+EQVG PLELY++P FVA FLGT +
Sbjct: 181 QELAATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSPLELYHHPANLFVAGFLGTPKMG 240
Query: 239 KLRS----TNGVAC-----------LGELCFNVGVDGPVKVFFRPESVEIGKEG 277
LR G C L + PV + RPE + I + G
Sbjct: 241 FLRGHLSRNQGERCEVALECGARVGLPLCAGELATGSPVTLGIRPEHLNIARPG 294
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 243 bits (615), Expect = 2e-63
Identities = 131/250 (52%), Positives = 165/250 (65%), Gaps = 10/250 (4%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ ++ + K F F ++L V G+L+S+LGPSGCGKTT LRIIAGLE D G +LFD
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGKILFD 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE------IERKVREV 115
G+DVT R +GFVFQ YALF HMNVF NVAFGL V LP+ E I KV E+
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTV--LPKSERPSKGQIRAKVEEL 120
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
L+LV L P QLSGGQ+QR+ALARAL +EP++LLLDEP LDAKVR+ LR ++
Sbjct: 121 LKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLR 180
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
I LG+T++ VTHDQEEA+ +SD I VMN G+IEQ G +Y P+ FV +FLG
Sbjct: 181 DIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGET 240
Query: 236 NLLKLRSTNG 245
+ + R G
Sbjct: 241 DAFEGRIEKG 250
>emb|CAC02745.1| (AL390114) probable sulfate transport ATP-binding protein cysa
[Leishmania major]
Length = 263
Score = 243 bits (615), Expect = 2e-63
Identities = 127/232 (54%), Positives = 161/232 (68%), Gaps = 8/232 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
V L+ +GEL ++LGPSGCGKTT LR+IAGLER D+G VL +G+D T P R +GFVF
Sbjct: 11 VTLDFAEGELTALLGPSGCGKTTLLRVIAGLERADRGQVLLEGQDATGQPVRQRQVGFVF 70
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKE------IERKVREVLELVGLKGFENRMPEQLS 133
Q YALF HM VF+NVAFGL V+ PR E I +VR +LELV +R P QLS
Sbjct: 71 QHYALFRHMTVFENVAFGLRVK--PRGERPGXAXIRERVRALLELVQXDWLADRYPPQLS 128
Query: 134 GGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQE 193
GGQ+QR+AL RAL +EP VLLLDEP LDAKVR+ LR ++R+ EL +T+++VTHDQE
Sbjct: 129 GGQRQRIALXRALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTSVFVTHDQE 188
Query: 194 EAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNG 245
EA+ ++DR+ +M GR+EQVG P +Y +P T FV FLG N + R G
Sbjct: 189 EALEVADRVVLMQRGRVEQVGSPQAVYEHPATPFVFGFLGHVNRIHGRLERG 240
>pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654969|gb|AAF93709.1| (AE004140) sulfate ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 376
Score = 243 bits (613), Expect = 3e-63
Identities = 127/248 (51%), Positives = 170/248 (68%), Gaps = 6/248 (2%)
Query: 4 VELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ L + K F F+ + L+++DGE+I +LGPSG GKTT LRIIAGLE D G + F
Sbjct: 3 IRLDNISKHFGQFQALAPLSLKIEDGEMIGLLGPSGSGKTTLLRIIAGLEGADSGTIHFR 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRK----EIERKVREVLE 117
RDVT + R +GFVFQ+YALF HM V NVAFGL+V + ++ EI+++V+++LE
Sbjct: 63 NRDVTNVHVRDRRVGFVFQNYALFRHMTVADNVAFGLQVMERAQRPNPAEIQKRVKQLLE 122
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+V L +R PEQLSGGQ+QR+ALARAL +PEVLLLDEP LDAKVR+ LR ++ +
Sbjct: 123 IVQLGHLAHRYPEQLSGGQKQRIALARALATQPEVLLLDEPFGALDAKVRKELRRWLRSL 182
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
ELG T+++VTHDQ+EA+ +SDR+ VM+ GRIEQ+ P+ELY P + FV F G N
Sbjct: 183 HDELGFTSVFVTHDQDEALELSDRVVVMSNGRIEQIDSPVELYAQPNSRFVFDFFGNVNQ 242
Query: 238 LKLRSTNG 245
NG
Sbjct: 243 FAGEWQNG 250
>pir||E82302 iron(III) ABC transporter, ATP-binding protein VC0610 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655042|gb|AAF93776.1| (AE004146) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 343
Score = 243 bits (613), Expect = 3e-63
Identities = 136/303 (44%), Positives = 189/303 (61%), Gaps = 18/303 (5%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV------LFDGRDVTFLPPYSR 73
+ L+V GE++ +LG SGCGKTT L+ IAGL G + L DG+ +LPP R
Sbjct: 23 LSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLNCVTLDDGK--RWLPPEQR 80
Query: 74 NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLS 133
NIG +FQDYALFPH+ V +NV FGL+ +P K+ E K+ E+L LV L F R P QLS
Sbjct: 81 NIGMIFQDYALFPHLTVAQNVGFGLDA--MPAKQKEAKIAEMLALVHLDAFAERYPHQLS 138
Query: 134 GGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQE 193
GGQQQRVA+ARAL +P++LLLDEP SN+D +VR L +EI++I K+ G+T ++VTH +E
Sbjct: 139 GGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKIFKQQGVTAIFVTHSRE 198
Query: 194 EAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL---KLRSTNGVACLG 250
EA A +D++AVMN G IEQ G ELYY P ++FVA FLG G+ L ++ T LG
Sbjct: 199 EAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSYLSAKRISETQYQTALG 258
Query: 251 EL----CFNVGVDGPVKVFFRPESVEI-GKEGVEAEVMDYEILPGRIRFRLSVQGKEIIA 305
+ + V+ K+ RP+ V+I +E V + + + R+ + G ++IA
Sbjct: 259 VVEAIARQPIAVEAECKLLLRPQQVQIRAEEESSVTVTEQQFMGDHCRYLIDAHGTQLIA 318
Query: 306 EDS 308
S
Sbjct: 319 TSS 321
>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp. (strain PCC
6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
transporter [Synechocystis sp.]
Length = 368
Score = 242 bits (612), Expect = 3e-63
Identities = 123/226 (54%), Positives = 159/226 (69%), Gaps = 6/226 (2%)
Query: 19 RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT----FLPPYSRN 74
+++ + GE++ +LGPSGCGKTT LRIIAG E P G V +G V+ PP R
Sbjct: 38 KINFNLAPGEILGLLGPSGCGKTTLLRIIAGFETPTSGTVHLEGDCVSGENGLTPPEQRQ 97
Query: 75 IGFVFQDYALFPHMNVFKNVAFGL--EVRKLPRKEIERKVREVLELVGLKGFENRMPEQL 132
G VFQDYALFPH+ + N+AFGL + +KL R++I+ +V EVL LVGL G E R P +L
Sbjct: 98 TGMVFQDYALFPHLTITDNIAFGLRHKSQKLNRQQIQGRVAEVLHLVGLTGLEKRYPHEL 157
Query: 133 SGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQ 192
SGGQQQR+ALARAL +P ++LLDEPLSNLD +VR+ LR EI+ I K G ++VTHDQ
Sbjct: 158 SGGQQQRIALARALAPKPNLILLDEPLSNLDVQVRQRLRHEIRHILKATGTAAIFVTHDQ 217
Query: 193 EEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
EEAMAISDRI VM G +EQ+G P E+Y +P + FVA+F+ N +
Sbjct: 218 EEAMAISDRIGVMYRGNLEQIGTPEEIYRSPASRFVAEFVTQANFV 263
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 242 bits (611), Expect = 5e-63
Identities = 120/237 (50%), Positives = 167/237 (69%), Gaps = 3/237 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M +V L V K + + V +L V+D E + +LGPSGCGKTTTLR+IAGLE G
Sbjct: 3 MAQVVLENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITDGK 62
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ DG+ V + P R+I VFQ+YAL+PHM V++N+AFGL++RK P+ EI+R+VRE +
Sbjct: 63 IYIDGKVVNDVEPKDRDIAMVFQNYALYPHMTVYENMAFGLKLRKYPKDEIDRRVREAAK 122
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++G++ +R P QLSGGQ+QRVA+ RA+V P+V L DEPLSNLDAK+R +R E+K++
Sbjct: 123 ILGIENLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSELKKL 182
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
L T +YVTHDQ EAM ++D+I VM G I+Q+G P E+Y +P FVA F+G+
Sbjct: 183 HHRLQATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEIYNSPANVFVAGFIGS 239
>pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog yurJ - Bacillus
subtilis >gi|2635752|emb|CAB15245.1| (Z99120) similar to
multiple sugar ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 367
Score = 241 bits (608), Expect = 1e-62
Identities = 115/214 (53%), Positives = 159/214 (73%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQ 80
DL+VKD EL+ ++GPSGCGK+TTLR++AGLE +GN+L DG V LPP R+I VFQ
Sbjct: 23 DLDVKDKELLVLVGPSGCGKSTTLRMVAGLESISEGNLLIDGERVNDLPPKERDIAMVFQ 82
Query: 81 DYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRV 140
+YAL+PHM VF N+AFGL++RK+ ++EI +V ++ ++ R P+ LSGGQ+QRV
Sbjct: 83 NYALYPHMTVFDNMAFGLKLRKMAKQEIAERVHAAARILEIEHLLKRKPKALSGGQRQRV 142
Query: 141 ALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISD 200
AL R++V EP+V L+DEPLSNLDAK+R ++R EI ++ + L T +YVTHDQ EAM + D
Sbjct: 143 ALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLHQRLEATIIYVTHDQTEAMTMGD 202
Query: 201 RIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
RI VMN G I+QV +P ++Y+ P FVA F+G+
Sbjct: 203 RIVVMNEGEIQQVAKPHDIYHYPANLFVAGFIGS 236
>gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protein [Bacillus
firmus]
Length = 366
Score = 241 bits (608), Expect = 1e-62
Identities = 118/240 (49%), Positives = 172/240 (71%), Gaps = 3/240 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M ++L+ + K + G V +L++KD E I +GPSGCGK+TTLR+IAGLE KG+
Sbjct: 1 MADIQLKNIYKIYDGDVTAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ R V + P R+I VFQ+YAL+PHMNV++N+AFGL++RK + EI+R+VR+ +
Sbjct: 61 LYIGDRRVNDVAPKDRDIAMVFQNYALYPHMNVYENMAFGLKLRKFKKDEIDRRVRDAAK 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++GL+ +R P+ +SGGQ+QRVAL RA+V +P+V L+DEPLSNLDAK+R +R EI ++
Sbjct: 121 ILGLEAMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
K L TT+YVTHDQ EAM ++ RI +M G I+QVG P ++Y NP+ FV F+G+ ++
Sbjct: 181 HKRLQTTTIYVTHDQTEAMTMATRIVIMKDGFIQQVGTPKDVYDNPENVFVGGFIGSPSM 240
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 241 bits (608), Expect = 1e-62
Identities = 121/237 (51%), Positives = 169/237 (71%), Gaps = 2/237 (0%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+E+R V ++F F V L + GE ++LGPSGCGKTT LR++AG ++PD G + +
Sbjct: 6 LEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLN 65
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G+D+ + P R + VFQ YALFPHM+V +N+AF L++ + + EI+ +V + L+ V L
Sbjct: 66 GQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKSEIDARVEQALKDVRL 125
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
RMP QLSGGQ+QRVA+ARALV P +LLLDEPLS LDAK+RE +++E+ +QK++
Sbjct: 126 ADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINLQKDV 185
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
GIT +YVTHDQ EA+A+S RIAVMN GR+EQ+ P +Y P++ FVA F+G NLL
Sbjct: 186 GITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETIYSFPRSRFVADFIGQCNLL 242
>sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1469284|gb|AAB05030.1| (U05042) afuC gene product
[Actinobacillus pleuropneumoniae]
>gi|1477453|gb|AAB17216.1| (U04954) afuC [Actinobacillus
pleuropneumoniae]
Length = 348
Score = 240 bits (607), Expect = 1e-62
Identities = 127/312 (40%), Positives = 189/312 (59%), Gaps = 10/312 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+DL +K G ++++LGPSGCGKTT LR++AGLE P G + DG DVT +R+I VF
Sbjct: 24 LDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVF 83
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YALFPHM++ NV +GL ++ + +E +++V+E LELV L GF +R +Q+SGGQQQR
Sbjct: 84 QSYALFPHMSIGDNVGYGLRMQGVSNEERKQRVKEALELVDLAGFADRFVDQISGGQQQR 143
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALARALV++P+VL+LDEPLSNLDA +R S+R +I+ +Q+ LGIT++YVTHDQ EA A+S
Sbjct: 144 VALARALVLKPKVLILDEPLSNLDANLRRSMREKIRELQQRLGITSLYVTHDQTEAFAVS 203
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVG-- 257
D + VMN G I Q R Y+ + F+G + G +G+ F +
Sbjct: 204 DEVIVMNKGTIMQKARQKIFIYDRILYSLRNFMGESTICDGNLNQGTVSIGDYRFPLHNA 263
Query: 258 -----VDGPVKVFFRPESVEI---GKEGVEAEVMDYEILPGRIRFRLSVQGKEIIAEDSL 309
DG V RPE++ + G+ ++ + + GK+++ +
Sbjct: 264 ADFSVADGACLVGVRPEAIRLTATGETSQRCQIKSAVYMGNHWEIVANWNGKDVLINANP 323
Query: 310 ARYEEIPKKVYI 321
+++ K +I
Sbjct: 324 DQFDPDATKAFI 335
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 240 bits (606), Expect = 2e-62
Identities = 128/288 (44%), Positives = 187/288 (64%), Gaps = 15/288 (5%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+E+R + K + G V L + GE+ ++LG SGCGK+T LR++AG E+P G ++ D
Sbjct: 47 LEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLD 106
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G D++ +PPY R I +FQ YALFPHM V +N+AFGL+ KLP+ EI +V E+L LV +
Sbjct: 107 GVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHM 166
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ F R P QLSGGQ+QRVALAR+L P++LLLDEP+ LD K+R+ +++E+ I + +
Sbjct: 167 QEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV 226
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGN----L 237
G+T + VTHDQEEAM ++ RIA+MN G+ Q+G P E+Y +P T + A+F+G+ N +
Sbjct: 227 GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGV 286
Query: 238 LKLRSTNGVACLGE-LCFNVGVDG--------PVKVFFRPESVEIGKE 276
LK R +G+ L + VD PV V RPE + + +E
Sbjct: 287 LKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPEKIMLCEE 334
>pir||E71296 probable spermidine/putrescine ABC transporter, ATP-binding protein
(potA) - syphilis spirochete >gi|3322953|gb|AAC65627.1|
(AE001240) spermidine/putrescine ABC transporter,
ATP-binding protein (potA) [Treponema pallidum]
Length = 379
Score = 240 bits (606), Expect = 2e-62
Identities = 119/218 (54%), Positives = 156/218 (70%)
Query: 19 RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFV 78
R + ++ GE SILGPSGCGKTT LRIIAG E+PD G++ FD V + R V
Sbjct: 27 RATVHIRQGEFFSILGPSGCGKTTLLRIIAGFEQPDSGDLTFDHVSVLGVGANKRRSNTV 86
Query: 79 FQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQ 138
FQ YALFPH++V++N+AF L +++L + I +V E L LV L ++ P QLSGGQQQ
Sbjct: 87 FQSYALFPHLSVYENIAFPLRLKRLSKNLIRERVHEYLHLVQLDEHLHKKPHQLSGGQQQ 146
Query: 139 RVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAI 198
RVA+ARALV EP VLLLDEPLS LDAK+R +L +E+ + + GIT +++THDQ EA+++
Sbjct: 147 RVAIARALVCEPGVLLLDEPLSALDAKLRSNLLIELDTLHDQTGITFVFITHDQSEALSV 206
Query: 199 SDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGN 236
SDRIAVMN G+I Q+G P E+Y P T+FVAKF+G N
Sbjct: 207 SDRIAVMNKGKILQIGTPYEIYEQPATDFVAKFIGETN 244
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 240 bits (606), Expect = 2e-62
Identities = 128/276 (46%), Positives = 175/276 (63%), Gaps = 6/276 (2%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V +GV ++F V L++ GE ++LG SG GKTT L ++AG + P++G VL
Sbjct: 9 VSFQGVTRRFGPVTAVDNVSLDISQGEFFALLGSSGSGKTTLLTLLAGFDNPNEGQVLMS 68
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G V+ +PP+ R IG VFQ+YALFPH+ +NVA+ L +R + R E E +V+ L LV L
Sbjct: 69 GVSVSDVPPHKRQIGVVFQNYALFPHLTAAENVAYPLRMRGVARHEREERVKAALALVNL 128
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
P QLSGGQQQRVALARALV P +LL+DEPL LD ++R+ ++ E+KRIQ EL
Sbjct: 129 SDRLGAYPIQLSGGQQQRVALARALVFSPAILLMDEPLGALDRRLRDQMQQELKRIQHEL 188
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
GIT +YVTHDQ EAMA++DRI +M+ GR+ QV P +Y P + FVA+F+G ++L++
Sbjct: 189 GITVIYVTHDQSEAMAMADRIGIMSAGRLLQVADPEAIYAAPSSHFVARFIGECSILRVS 248
Query: 242 STN---GVACLG-ELCFNVGVDGPVKVFFRPESVEI 273
TN G G +GP + RPE V I
Sbjct: 249 GTNEGRGYEIAGARQSLPSPANGPFDIVVRPEDVAI 284
>pir||G83605 probable ATP-binding component of ABC transporter PA0326 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946173|gb|AAG03715.1|AE004470_9 (AE004470) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 349
Score = 240 bits (606), Expect = 2e-62
Identities = 131/286 (45%), Positives = 182/286 (62%), Gaps = 4/286 (1%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
V L++ E ++LGPSGCGKTT LR+IAG E+P G++ G + LPP+ R + VF
Sbjct: 27 VSLDIHANEFFTLLGPSGCGKTTLLRLIAGFEQPSSGSIRLYGEHMEGLPPFRRPVNTVF 86
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YALFPHM+V N+ FGLE++ PR EI+ V +L+LV L R +QLSGGQQQR
Sbjct: 87 QSYALFPHMSVADNIGFGLEMQGRPRSEIDATVSRMLDLVKLPEVGKRRADQLSGGQQQR 146
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
+ALARAL P+VLLLDE LS LD K+R+ +++E+KR+Q E GIT ++VTHDQEEA+ +S
Sbjct: 147 IALARALASRPKVLLLDESLSALDLKLRKEMQIELKRLQHETGITFIFVTHDQEEALTMS 206
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRS-TNGVACLG--ELCFNV 256
DRIAVM+ G++ QVG P ++Y P VA F+G N L+ ++ +GV L
Sbjct: 207 DRIAVMSKGKVLQVGTPSDIYEAPLNRAVADFIGETNFLEGQADADGVRLADGQRLAATT 266
Query: 257 GVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGR-IRFRLSVQGK 301
G V + RPE E+ +G V++ + G + L+V G+
Sbjct: 267 PGSGAVTLAIRPERTELAADGQLEGVLENIVYVGTDTVYHLNVAGQ 312
>sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMX
>gi|7442505|pir||B69661 multiple sugar-binding transport
ATP-binding protein msmX - Bacillus subtilis
>gi|1783246|dbj|BAA11723.1| (D83026) highly homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636416|emb|CAB15907.1| (Z99123)
multiple sugar-binding transport ATP-binding protein
[Bacillus subtilis]
Length = 365
Score = 240 bits (605), Expect = 2e-62
Identities = 131/309 (42%), Positives = 199/309 (64%), Gaps = 11/309 (3%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQ 80
+L + D E I +GPSGCGK+TTLR++AGLE KG+ +G+ V + P R+I VFQ
Sbjct: 24 NLHIADKEFIVFVGPSGCGKSTTLRMVAGLEEISKGDFYIEGKRVNDVAPKDRDIAMVFQ 83
Query: 81 DYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRV 140
+YAL+PHM V+ N+AFGL++RK+P+ EI+++V E +++GL+ + +R P+ LSGGQ+QRV
Sbjct: 84 NYALYPHMTVYDNIAFGLKLRKMPKPEIKKRVEEAAKILGLEEYLHRKPKALSGGQRQRV 143
Query: 141 ALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISD 200
AL RA+V + +V L+DEPLSNLDAK+R +R EI ++ + L TT+YVTHDQ EA+ ++
Sbjct: 144 ALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQRLQTTTIYVTHDQTEALTMAT 203
Query: 201 RIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLKLRSTNGVACLGELCFNVGV 258
RI VM G+I+Q+G P ++Y P+ FV F+G+ N K + T+G+ +G V
Sbjct: 204 RIVVMKDGKIQQIGTPKDVYEFPENVFVGGFIGSPAMNFFKGKLTDGLIKIGSAALTV-P 262
Query: 259 DGPVKVFFRPESVEIGKE---GVEAEVMDYEILPGRIRFRLSVQGKEIIAE---DSLARY 312
+G +KV E IGKE G+ E + E++ S++ K +AE + Y
Sbjct: 263 EGKMKVL--REKGYIGKEVIFGIRPEDIHDELIVVESYKNSSIKAKINVAELLGSEIMIY 320
Query: 313 EEIPKKVYI 321
+I + +I
Sbjct: 321 SQIDNQDFI 329
>sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7428825|pir||QRECSA
sulfate transport ATP-binding protein cysA - Escherichia
coli >gi|1788761|gb|AAC75475.1| (AE000329) ATP-binding
component of sulfate permease A protein; chromate
resistance [Escherichia coli K12]
>gi|1799841|dbj|BAA16296.1| (D90871) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
>gi|1799851|dbj|BAA16305.1| (D90872) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
Length = 365
Score = 239 bits (604), Expect = 3e-62
Identities = 131/284 (46%), Positives = 184/284 (64%), Gaps = 14/284 (4%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+E+ ++K F ++ D L++ G+++++LGPSG GKTT LRIIAGLE G++ F
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE------IERKVREV 115
G DV+ L R +GFVFQ YALF HM VF N+AFGL V LPR+E I+ KV ++
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTV--LPRRERPNAAAIKAKVTKL 120
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LE+V L +R P QLSGGQ+QRVALARAL +EP++LLLDEP LDA+VR+ LR ++
Sbjct: 121 LEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR 180
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
++ +EL T+++VTHDQEEA ++DR+ VM+ G IEQ P +++ P T FV +F+G
Sbjct: 181 QLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEV 240
Query: 236 NLLKLRSTNGVACLG----ELCFNVGVDGPVKVFFRPESVEIGK 275
N L+ G +G L + GPV +F RP V+I +
Sbjct: 241 NRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISR 284
>pir||T03550 ATP-binding transport protein polk - Rhodobacter capsulatus
>gi|3128351|gb|AAC16203.1| (AF010496) ATP-binding
transport protein polk [Rhodobacter capsulatus]
Length = 332
Score = 239 bits (604), Expect = 3e-62
Identities = 120/236 (50%), Positives = 161/236 (67%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + L+GV K+F ++ +DL + DGE + +GPSGCGK+T LR+IAGLE G V
Sbjct: 1 MGEILLKGVTKRFGDVEVIPPIDLAINDGEFVVFVGPSGCGKSTLLRLIAGLEDVSGGVV 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
DG+D T P R + VFQ YAL+PHM+V KN+AF L++ KLP EIE KV+ ++
Sbjct: 61 EIDGKDATATAPADRGLAMVFQSYALYPHMSVKKNIAFPLKMAKLPAAEIEAKVQAAAKV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L + +R P QLSGGQ+QRVA+ RA+V P+ L DEPLSNLDA +R ++R+EI +
Sbjct: 121 LNLTAYLDRKPGQLSGGQRQRVAIGRAIVRNPQAFLFDEPLSNLDAALRVNMRLEISELH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
L T +YVTHDQ EAM ++D+I V+ GRIEQVG PLELY P+ FVA F+G+
Sbjct: 181 HSLKTTMIYVTHDQVEAMTMADKIVVLQAGRIEQVGSPLELYRTPRNRFVAGFIGS 236
>pir||H72690 probable spermidine/putrescine transport ATP-binding protein
APE0944 - Aeropyrum pernix (strain K1)
>gi|5104613|dbj|BAA79928.1| (AP000060) 325aa long
hypothetical spermidine/putrescine transport ATP-binding
protein [Aeropyrum pernix]
Length = 325
Score = 239 bits (603), Expect = 4e-62
Identities = 141/312 (45%), Positives = 179/312 (57%), Gaps = 34/312 (10%)
Query: 6 LRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDV 65
LRGV FP + + ++LGPSGCGKTT L++IAGL +P +G V F G D
Sbjct: 4 LRGVSFSFP-----------ESSITAVLGPSGCGKTTMLKVIAGLLKPRRGRVFFGGVDY 52
Query: 66 TFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL---K 122
T LPP R++GFVFQD ALFPHM V+ NVAFGL R E+ R+V LE VGL +
Sbjct: 53 TGLPPERRSVGFVFQDLALFPHMTVYDNVAFGLRARGFSGGEVRRQVEWALETVGLTPPR 112
Query: 123 GFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELG 182
F R LSGGQQQRVALARA+ EP VLLLDEPLS+LD K+R+ L E+KR+Q++LG
Sbjct: 113 EFMGRRVTGLSGGQQQRVALARAIAYEPPVLLLDEPLSHLDFKIRQRLLAELKRLQRKLG 172
Query: 183 ITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRS 242
T +YVTHDQ EAM ++D + +M GRI Q G P E+Y P +VA F G N++
Sbjct: 173 STMIYVTHDQWEAMELADTLVIMRDGRIVQHGTPSEVYTRPANVYVATFFGDANIIP--- 229
Query: 243 TNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEG---------VEAEVMDYEILPGRIR 293
+ G G + RPE +EI + G +EA V D IR
Sbjct: 230 --------KELLTPGSGGEWAIMVRPEDLEIVRNGSPVPQGWPRLEAVVEDLVFQGPLIR 281
Query: 294 FRLSVQGKEIIA 305
L +G + A
Sbjct: 282 VELRWRGGRLRA 293
>pir||D75308 sugar ABC transportor, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459951|gb|AAF11701.1|AE002049_6 (AE002049) sugar
ABC transportor, ATP-binding protein [Deinococcus
radiodurans]
Length = 455
Score = 239 bits (603), Expect = 4e-62
Identities = 134/306 (43%), Positives = 192/306 (61%), Gaps = 20/306 (6%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQ 80
+LE+ D E + +GPSGCGK+TTLR+IAGLE G + R V +PP R+I VFQ
Sbjct: 59 NLEIADREFMVFVGPSGCGKSTTLRMIAGLEDISDGVLRIGDRVVNDVPPKDRDIAMVFQ 118
Query: 81 DYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRV 140
+YAL+PHMNV++N+AFGL++RK PR+EI+++VR+ ++ ++ R P++LSGGQ+QRV
Sbjct: 119 NYALYPHMNVYENMAFGLKLRKTPREEIDKRVRDAARILQIEHLLGRKPKELSGGQRQRV 178
Query: 141 ALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISD 200
A+ RA+V EP V L+DEPLSNLDAK+R +R +I ++ + LG T +YVTHDQ EAM + +
Sbjct: 179 AMGRAIVREPSVFLMDEPLSNLDAKLRVEMRSQISQLHRRLGATIIYVTHDQVEAMTLGN 238
Query: 201 RIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLKLRSTNG--------VACLG 250
RI VM G I QV P+ LY P+ FVA F+G+ N L R NG VA +G
Sbjct: 239 RIVVMRDGVIMQVDTPMNLYDFPQNRFVAGFIGSPSMNFLTARVQNGEFVIGQSQVAAMG 298
Query: 251 ELCFNVGVDGPVKVF--FRPESVEI--------GKEGVEAEVMDYEILPGRIRFRLSVQG 300
L ++ +VF RPE V + G+ + EV+ E L + + V G
Sbjct: 299 RLAESLRAYEGREVFLGIRPEHVGLVGHSDLPQGRNVLRGEVVVVESLGAQTDLIVDVAG 358
Query: 301 KEIIAE 306
+++ A+
Sbjct: 359 QQVTAK 364
>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
Length = 317
Score = 239 bits (603), Expect = 4e-62
Identities = 120/233 (51%), Positives = 166/233 (70%), Gaps = 4/233 (1%)
Query: 3 RVELRGVEKKFPGFKLRVDLE--VKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
++ELR + K + FK+ DL ++ GE ILGPSG GK+T L+II G+E+PD G ++
Sbjct: 4 KLELRNINKSYGKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQPDSGKIII 63
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
DG+DVT LPP RNI VFQ+YAL+P+MNVF N+AF L + + I R+V E + +G
Sbjct: 64 DGKDVTKLPPNKRNIAMVFQNYALYPNMNVFDNIAFPLRMNHF--RNISRRVHETAQKLG 121
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
++ ++ Q+SGGQQQRVALARA+V P + LLDEPLSNLDA+VR + R E+K+IQ+E
Sbjct: 122 IENLLDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSNLDARVRYAARNELKKIQQE 181
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
L T ++VTHDQ+EA A+ DRI V++ G+ EQ+G ELY +PKT +V F+G
Sbjct: 182 LDQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEELYNDPKTVWVGDFIG 234
>gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Thermoanaerobacter
ethanolicus]
Length = 371
Score = 238 bits (602), Expect = 5e-62
Identities = 114/214 (53%), Positives = 154/214 (71%)
Query: 24 VKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDYA 83
++D E + ++GPSGCGKTTTLR+IAGLER KGN+ + V +LPP R+I VFQDYA
Sbjct: 31 IEDKEFVVLVGPSGCGKTTTLRMIAGLERQTKGNIYIGEKLVNYLPPKDRDIAMVFQDYA 90
Query: 84 LFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALA 143
L+PHM V++N++FGL K+PR EIE+KV+ E++G+ +R P +LSGGQ+QRVA+
Sbjct: 91 LYPHMTVYENLSFGLRNLKVPRTEIEQKVKRAAEILGISELLDRKPRELSGGQRQRVAVG 150
Query: 144 RALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIA 203
RA+V P+V L DEPLSNLDAK+R +R+E+ + K+L T +YVTHDQ EAM + RI
Sbjct: 151 RAIVRNPKVFLFDEPLSNLDAKLRVQMRVELAELHKKLETTIVYVTHDQVEAMTLGQRII 210
Query: 204 VMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
VMN G I+Q+ P ELY P FVA F+G ++
Sbjct: 211 VMNLGIIQQIATPDELYNRPVNMFVAGFIGAPSM 244
>pir||G81926 probable polyamine permease ATP-binding protein NMA0816 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379535|emb|CAB84098.1| (AL162754) putative
polyamine permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 374
Score = 237 bits (598), Expect = 2e-61
Identities = 126/305 (41%), Positives = 194/305 (63%), Gaps = 16/305 (5%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
++++G+ KKF +DL++ E+ ++LG SG GK+T LR++AG+E P++G ++ D
Sbjct: 13 LQIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMENPNQGKIILD 72
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G+D+T L PY R I +FQ YALFPHM V +N+AFGL+ K+P+ EI +V E+L LV +
Sbjct: 73 GQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQM 132
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
F R P QLSGGQQQR+ALAR+L P++LLLDEPL LD K+R+ ++E+ +++
Sbjct: 133 TKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQV 192
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--- 238
G+T + VTHDQEEAM ++ RIA+M+ G+++QVG P ++Y P + F A+F+G N+
Sbjct: 193 GVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGV 252
Query: 239 ---KLRSTNGVACLG---ELCFNVGVDGPVK----VFFRPESVEIGKEGVEAEVMDYEIL 288
+ C G + + G+ GP + V RPE +++ KE E + DY
Sbjct: 253 VIEDHADYAVIECEGLENHVRIDHGLGGPSEQDLWVSIRPEDIDLYKEKPE-YLGDYNWA 311
Query: 289 PGRIR 293
G ++
Sbjct: 312 KGTVK 316
>sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
>gi|282320|pir||E42400 ABC-type transport system
ATP-binding protein msmK [validated] - Streptococcus
mutans >gi|153741|gb|AAA26938.1| (M77351) ATP-binding
protein [Streptococcus mutans]
Length = 377
Score = 236 bits (597), Expect = 2e-61
Identities = 120/248 (48%), Positives = 168/248 (67%), Gaps = 14/248 (5%)
Query: 1 MVRVELRGVEKKFPGFKLR----VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
MV + L + KK+P DL++K+ E I +GPSGCGK+TTLR++AGLE KG
Sbjct: 1 MVELNLNHIYKKYPNSSHYSVEDFDLDIKNKEFIVFVGPSGCGKSTTLRMVAGLEDITKG 60
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
+ DG V P R+I VFQ+YAL+PHM+V+ N+AFGL++R ++ I+++V+E
Sbjct: 61 ELKIDGEVVNDKAPKDRDIAMVFQNYALYPHMSVYDNMAFGLKLRHYSKEAIDKRVKEAA 120
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
+++GL F R P LSGGQ+QRVA+ RA+V + +V L+DEPLSNLDAK+R S+R EI +
Sbjct: 121 QILGLTEFLERKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRAEIAK 180
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMN----------FGRIEQVGRPLELYYNPKTE 226
I + +G TT+YVTHDQ EAM ++DRI +M+ GR+EQVG P ELY P +
Sbjct: 181 IHRRIGATTIYVTHDQTEAMTLADRIVIMSSTKNEDGSGTIGRVEQVGTPQELYNRPANK 240
Query: 227 FVAKFLGT 234
FVA F+G+
Sbjct: 241 FVAGFIGS 248
>gb|AAA23639.1| (M32101) cysA [Escherichia coli]
Length = 365
Score = 236 bits (596), Expect = 3e-61
Identities = 129/284 (45%), Positives = 183/284 (64%), Gaps = 14/284 (4%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+E+ ++K F ++ D L++ G+++++LGPSG GKTT LRIIAGLE G++ F
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE------IERKVREV 115
G DV+ L R +GFVFQ YALF HM VF N+AFGL V LPR+E I+ KV ++
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTV--LPRRERPNAAAIKAKVTKL 120
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LE+V L +R P +SGGQ+QRVALARAL +EP++LLLDEP LDA+VR+ LR ++
Sbjct: 121 LEMVQLAHLADRYPAHVSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR 180
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
++ +EL T+++VTHDQEEA ++DR+ VM+ G IEQ P +++ P T FV +F+G
Sbjct: 181 QLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEV 240
Query: 236 NLLKLRSTNGVACLG----ELCFNVGVDGPVKVFFRPESVEIGK 275
N L+ G +G L + GPV +F RP V+I +
Sbjct: 241 NRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISR 284
>pir||C81179 spermidine/putrescine ABC transporter, ATP-binding protein NMB0610
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225840|gb|AAF41037.1| (AE002416)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 419
Score = 236 bits (596), Expect = 3e-61
Identities = 126/305 (41%), Positives = 194/305 (63%), Gaps = 16/305 (5%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
++++G+ KKF +DL++ E+ ++LG SG GK+T LR++AG+E P++G ++ D
Sbjct: 58 LKIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMESPNQGKIILD 117
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
G+D+T L PY R I +FQ YALFPHM V +N+AFGL+ K+P+ EI +V E+L LV +
Sbjct: 118 GQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQM 177
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
F R P QLSGGQQQR+ALAR+L P++LLLDEPL LD K+R+ ++E+ +++
Sbjct: 178 TKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQV 237
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--- 238
G+T + VTHDQEEAM ++ RIA+M+ G+++QVG P ++Y P + F A+F+G N+
Sbjct: 238 GVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGV 297
Query: 239 ---KLRSTNGVACLG---ELCFNVGVDGPVK----VFFRPESVEIGKEGVEAEVMDYEIL 288
+ C G + + G+ GP + V RPE +++ KE E + DY
Sbjct: 298 VIEDHADYAVIECEGLENHVRIDHGLGGPSEQDLWVSIRPEDIDLYKEKPE-YLGDYNWA 356
Query: 289 PGRIR 293
G ++
Sbjct: 357 KGTVK 361
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 236 bits (596), Expect = 3e-61
Identities = 110/218 (50%), Positives = 158/218 (72%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
V L + GE+ ++LG SG GK+T LR++AG ERP +G + DG+D+T LPPY R I +F
Sbjct: 41 VSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMF 100
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q YALFPHM+V +N+AFGL+ LP+ EI+ +V E+L+LV + + R P QLSGGQ+QR
Sbjct: 101 QSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQR 160
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALAR+L P++LLLDEP+ LD K+R +++E+ I + +G+T + VTHDQEEAM ++
Sbjct: 161 VALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMA 220
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
RIA+M+ G IEQ+G P+++Y P + V +F+G NL
Sbjct: 221 QRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNL 258
>gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens]
Length = 337
Score = 236 bits (595), Expect = 3e-61
Identities = 114/204 (55%), Positives = 150/204 (72%)
Query: 30 ISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMN 89
+S+LGPSG GKT+ L +IAG ERP G ++ RDVT L P RNIG VFQ YALFPH+
Sbjct: 1 MSVLGPSGSGKTSVLTMIAGFERPTAGRIVIGDRDVTDLAPNKRNIGMVFQKYALFPHLT 60
Query: 90 VFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIE 149
V +N+AF L++R R ++ ++L+LV L GF +R P +LSGGQQQRVA+ARAL E
Sbjct: 61 VRQNIAFPLKLRSRWRSGWRQRADDMLDLVHLAGFADRFPSELSGGQQQRVAVARALAFE 120
Query: 150 PEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGR 209
P V+L+DEPL LD K+RE+++ EIKRIQ+++G T +YVTHDQEEA+ +SDR+A+M G
Sbjct: 121 PPVMLMDEPLGALDKKLREAMQFEIKRIQRQVGATVLYVTHDQEEALTMSDRVAIMQGGN 180
Query: 210 IEQVGRPLELYYNPKTEFVAKFLG 233
I Q+G P LY+ P T FVA F+G
Sbjct: 181 IVQIGAPSSLYHAPATRFVADFVG 204
>dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans]
Length = 349
Score = 235 bits (594), Expect = 4e-61
Identities = 134/289 (46%), Positives = 179/289 (61%), Gaps = 17/289 (5%)
Query: 4 VELRGVEKKFPG-FKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
++LR + K F K VD L ++ GE+I++LGPSGCGKTTTLR+IAG E+P G++
Sbjct: 4 IQLRDLTKTFSHTLKPAVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSGSIK 63
Query: 60 FDGRDVT----FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREV 115
G V +PP R IG VFQDYALFPH+ + KNV FGL K + + +EV
Sbjct: 64 IGGEVVYENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMFGLS--KWGTRAKRERAKEV 121
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LELVGL + R P +LSGGQQQRVALARAL +P V+L+DEP SNLDA +RE +R E+
Sbjct: 122 LELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKMRFEVT 181
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
I ++ T + VTHDQ++A A++DR+ VMN G I+Q+ P E+Y PK FVA+F+G
Sbjct: 182 TILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQFVGKT 241
Query: 236 NLLKLRSTNGVACLGELCFNVGVDGP-------VKVFFRPESVEIGKEG 277
NLL R + + V + VKV RPE ++ +EG
Sbjct: 242 NLLSGRLCEDMRHVDTHIGRVSLPAQSGVMLENVKVSIRPEGCKLAEEG 290
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 235 bits (594), Expect = 4e-61
Identities = 130/301 (43%), Positives = 184/301 (60%), Gaps = 18/301 (5%)
Query: 4 VELRGVEKKFPGFK------LRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
V+L+G+ K + K VDLE+ GE++++LGPSG GKTT LR++AGLE +G
Sbjct: 8 VKLQGIVKHYKTRKGIFKAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEEITEGK 67
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ +DG D T R IGFVFQ YALF H+ V N+AFG ++K+ +I ++V+E+L+
Sbjct: 68 IFYDGEDATDWSLEDRQIGFVFQGYALFKHLTVGDNIAFGPRMKKMDI-DIRKRVKELLD 126
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
LV L G E+R P+QLSGGQ+QR+ALARAL EP +LLLDEP LD ++RE LR +KRI
Sbjct: 127 LVQLPGLESRFPQQLSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDLRNSLKRI 186
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
L +T++ VTHDQEEA ++DR+ V N G IEQVG ++Y NP+T FV F+G N
Sbjct: 187 ISSLNLTSVMVTHDQEEAFEVADRVVVFNKGSIEQVGSLEDIYRNPQTAFVMDFVGEANH 246
Query: 238 LKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLS 297
+ R C+ + ++ FRP + E E D + P ++ ++
Sbjct: 247 IPSR------CVFAKRMKF-ISNKPQIMFRPTEI----EPYETFREDISVCPAQVTYKCP 295
Query: 298 V 298
V
Sbjct: 296 V 296
>dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 349
Score = 235 bits (594), Expect = 4e-61
Identities = 134/289 (46%), Positives = 179/289 (61%), Gaps = 17/289 (5%)
Query: 4 VELRGVEKKFPG-FKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
++LR + K F K VD L ++ GE+I++LGPSGCGKTTTLR+IAG E+P G++
Sbjct: 4 IQLRDLTKTFSHTLKPAVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSGSIK 63
Query: 60 FDGRDVT----FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREV 115
G V +PP R IG VFQDYALFPH+ + KNV FGL K + + +EV
Sbjct: 64 IGGEVVYENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMFGLS--KWGTRAKRERAKEV 121
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LELVGL + R P +LSGGQQQRVALARAL +P V+L+DEP SNLDA +RE +R E+
Sbjct: 122 LELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKMRFEVT 181
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
I ++ T + VTHDQ++A A++DR+ VMN G I+Q+ P E+Y PK FVA+F+G
Sbjct: 182 TILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQFVGKT 241
Query: 236 NLLKLRSTNGVACLGELCFNVGVDGP-------VKVFFRPESVEIGKEG 277
NLL R + + V + VKV RPE ++ +EG
Sbjct: 242 NLLSGRLCEDMRHVDTHIGRVSLPAQSEVMLENVKVSIRPEGCKLAEEG 290
>dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding protein) [Bacillus
halodurans]
Length = 365
Score = 235 bits (594), Expect = 4e-61
Identities = 116/240 (48%), Positives = 171/240 (70%), Gaps = 3/240 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M ++L+ V K + G V +L++KD E I +GPSGCGK+TTLR+IAGLE KG+
Sbjct: 1 MAEIQLKNVYKIYDGDVQAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+L G+ + + P R+I VFQ+YAL+PHMNV+ N+AFGL++RK + EI+++V+ +
Sbjct: 61 LLIGGKRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAFGLKLRKFKKDEIDKRVKNAAK 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++GL+ +R P+ +SGGQ+QRVAL RA+V +P+V L+DEPLSNLDAK+R +R EI ++
Sbjct: 121 ILGLEEMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
+ L TT+YVTHDQ EAM ++ RI +M G I+QVG P E+Y P+ FV F+G+ ++
Sbjct: 181 HQRLQTTTIYVTHDQTEAMTMATRIVIMKDGVIQQVGSPKEVYDFPENVFVGGFIGSPSM 240
>emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli]
Length = 377
Score = 235 bits (593), Expect = 6e-61
Identities = 123/270 (45%), Positives = 177/270 (65%), Gaps = 11/270 (4%)
Query: 19 RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFV 78
++D+ ++DGE + ++GPSGCGK+T+LR++AGLE + G + RDVT LPP R+I V
Sbjct: 23 QLDIAIEDGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDIAMV 82
Query: 79 FQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQ 138
FQ+YAL+PHM V N+ F L++ +P+ EI +KV E +++ L + +R P+ LSGGQ+Q
Sbjct: 83 FQNYALYPHMTVADNMGFALKIAGVPKAEIRQKVEEAAKILDLTQYLDRKPKALSGGQRQ 142
Query: 139 RVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAI 198
RVA+ RA+V EP+V L+DEPLSNLDAK+R S R +I +Q+ LGITT+YVTHDQ EAM +
Sbjct: 143 RVAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVTHDQVEAMTM 202
Query: 199 SDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLKLRSTNGVACLGELCFNV 256
DR+AV+ G ++QV P +Y P FVA F+G+ NL+++ T+G G V
Sbjct: 203 GDRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFGNSVVPV 262
Query: 257 G---------VDGPVKVFFRPESVEIGKEG 277
D V V RPE ++ + G
Sbjct: 263 NREALSAADKGDRTVTVGVRPEHFDVVELG 292
>gb|AAB88581.1| (M93437) CycB [Thermus thermophilus]
Length = 264
Score = 235 bits (593), Expect = 6e-61
Identities = 125/237 (52%), Positives = 165/237 (68%), Gaps = 4/237 (1%)
Query: 3 RVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDG 62
RV +EK F GF+L V L V +GE +++LGPSG GK+T LR++AGL RPD+G V F G
Sbjct: 26 RVLELSLEKAFSGFRLSVALSVAEGETLALLGPSGSGKSTLLRLVAGLLRPDRGFVRFLG 85
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGL-EVRKLPRKEIERKVREVLELVGL 121
D+ LPP R +GF+FQDYALFPH+ V +NVAFGL E R+E +VRE+L+ + L
Sbjct: 86 EDLNPLPPERRKVGFLFQDYALFPHLTVEENVAFGLVEAAGQGRRE---RVRELLKRMEL 142
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ P++LSGG+QQRVALARAL P +LLLDEPL LD ++RE L ++R KE
Sbjct: 143 TPHARKRPQELSGGEQQRVALARALAPRPRLLLLDEPLGALDLRLREELLFFLRRTLKEE 202
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
G+TT+ VTHDQ EA ++ R+A++ GR+ QVGRP E+Y PK + A+FLG NLL
Sbjct: 203 GVTTLLVTHDQGEAFLLAHRVALLREGRLVQVGRPEEVYARPKDPWAARFLGHKNLL 259
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 235 bits (593), Expect = 6e-61
Identities = 128/245 (52%), Positives = 171/245 (69%), Gaps = 10/245 (4%)
Query: 4 VELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+EL GV K++ G + V L V++GEL+++LGPSGCGKTTTLR++AGLERP G +
Sbjct: 27 LELDGVTKEY-GAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGLERPTGGTIEL 85
Query: 61 DGRDV----TFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
D + V TF+ R IG VFQD+ALFPH++V +NVAFGL R +V E+L
Sbjct: 86 DAQRVAGPDTFVAAEDREIGIVFQDFALFPHLSVAENVAFGLTDRD--EDATAARVDEML 143
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
LV + +R +QLSGGQQQRVA+AR+L EP++LLLDEP SNLD ++R +R E++R
Sbjct: 144 ALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLRVEMREEVRR 203
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGN 236
I KE G+T + VTHDQEEA++ISDR+AV+N G IEQVG P ++ +P++ FVA FLG
Sbjct: 204 ILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDPEGVFEHPESRFVASFLGQAA 263
Query: 237 LLKLR 241
L R
Sbjct: 264 FLSAR 268
>dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.]
Length = 363
Score = 235 bits (592), Expect = 8e-61
Identities = 119/275 (43%), Positives = 175/275 (63%), Gaps = 15/275 (5%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
V L+++ GE + ++GPSGCGK+TTLR++AGLE G + DGR + L P R++ VF
Sbjct: 23 VSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKDRDVAMVF 82
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YAL+PH+NV N++FGL +++ + I+ V+ +++GL+ R P LSGGQ+QR
Sbjct: 83 QNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQR 142
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VA+ RA+V +P+V L DEPLSNLDAK+R +R EIKR+ + LG T +YVTHDQ EAM ++
Sbjct: 143 VAMGRAIVRDPKVFLFDEPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLA 202
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL--------------LKLRSTNG 245
DRI VM G IEQ+G+P++L+ +P FVA F+G+ + ++L N
Sbjct: 203 DRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVDSTQHVELNGGNR 262
Query: 246 VACLGELCFNVGVDGPVKVFFRPESVEI-GKEGVE 279
++ L ++ V RPE V + G EG E
Sbjct: 263 ISLLPRAGTHLAPGQEVVFGIRPEDVTLDGVEGSE 297
>gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 324
Score = 233 bits (588), Expect = 2e-60
Identities = 125/264 (47%), Positives = 179/264 (67%), Gaps = 12/264 (4%)
Query: 23 EVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDY 82
+++ GE ILGPSG GK+T L+I+AG+E+ DKG ++ DG D+T PP RN+ VFQ+Y
Sbjct: 24 KIETGEFFVILGPSGEGKSTLLKILAGIEKLDKGKIIADGADITDKPPEKRNVAMVFQNY 83
Query: 83 ALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVAL 142
AL+P+M+V N+AF L++R + ++EI +V + +L+G+ ++ Q+SGGQQQRVAL
Sbjct: 84 ALYPNMSVRDNIAFPLKMRGMKKEEIIERVEKAAKLLGISEILDKKVTQISGGQQQRVAL 143
Query: 143 ARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRI 202
ARA+V P LLDEPLSNLDA+VR + R E+KRIQKEL T +YVTHDQ+EA++++DRI
Sbjct: 144 ARAIVRNPSYFLLDEPLSNLDARVRTTARGELKRIQKELKGTFIYVTHDQKEALSLADRI 203
Query: 203 AVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVDGPV 262
A+++ G+ EQV P LY PKT++VA+F+G + L GEL +
Sbjct: 204 AILHKGKFEQVSDPKTLYEYPKTKWVAQFVGEFPMNFLP--------GELM----KEKAQ 251
Query: 263 KVFFRPESVEIGKEGVEAEVMDYE 286
++ FRPE VE+GK + V E
Sbjct: 252 EIGFRPEWVEVGKGNLSCMVESVE 275
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 233 bits (588), Expect = 2e-60
Identities = 126/289 (43%), Positives = 184/289 (63%), Gaps = 10/289 (3%)
Query: 1 MVRVELRGVEKKFPGFKL----RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
MVR+ ++ V K F K+ V++ +++GE ILGPSG GKTT +RIIAGL+ P G
Sbjct: 1 MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTG 60
Query: 57 NVLFDGRDVT-----FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK 111
+ FD R V +PP R IG VFQ +AL+P++ F+N+AF L K+ ++EI ++
Sbjct: 61 ELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKR 120
Query: 112 VREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLR 171
V EV +++ + N P +LSGGQQQRVALARALV +P +LLLDEP SNLDA++R+S R
Sbjct: 121 VEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSAR 180
Query: 172 MEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKF 231
+K +Q LG+T + V+HD + AI+DR+ V+ G++ QVG+P +LY NP + VA
Sbjct: 181 ALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASL 240
Query: 232 LGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVF-FRPESVEIGKEGVE 279
+G N L+ + TN +G L F V V + RPE V++ K+ ++
Sbjct: 241 IGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIK 289
>pir||F71279 probable sugar ABC transporter, ATP-binding protein (ugpC) -
syphilis spirochete >gi|3323114|gb|AAC65771.1|
(AE001251) sugar ABC transporter, ATP-binding protein
(ugpC) [Treponema pallidum]
Length = 387
Score = 233 bits (587), Expect = 3e-60
Identities = 115/237 (48%), Positives = 161/237 (67%), Gaps = 3/237 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M +VEL+ + K + G V + + GE + +GPSGCGK+T LRIIAGLE G+
Sbjct: 1 MAKVELKHICKTYHGCVHAVKDVTITAESGEFVVFIGPSGCGKSTALRIIAGLEDICSGD 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ DG + + P RNI VFQ+YAL+PHMNVF N+AFGL +RK+P++EI R+V E
Sbjct: 61 LYIDGEHMNHVTPKDRNIAMVFQNYALYPHMNVFDNMAFGLRIRKIPQQEIIRRVHEAAR 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++ ++ R P+ LSGGQ+QRVA+ RA+V P+V L DEPLSNLDAK+R +R EI +
Sbjct: 121 VLDIEPLLARKPKALSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSEISLL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K L T +YVTHDQ EAM ++D+I +M G ++Q+G PL +Y +P FVA+F+G+
Sbjct: 181 HKRLKATMIYVTHDQMEAMTMADKIVIMKDGCVQQIGSPLHIYQHPANTFVAQFIGS 237
>gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]
Length = 342
Score = 233 bits (587), Expect = 3e-60
Identities = 131/320 (40%), Positives = 194/320 (59%), Gaps = 18/320 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++LR + K F F + V +E+K GE + +GPSGCGK+T LR+IAGLE G +
Sbjct: 1 MAELQLRDIRKSFGAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLEEITSGTL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
FDG+ V L P R I VFQ YAL+PHM V++N+AFG+++ +++ ++V E+
Sbjct: 61 AFDGQIVNQLTPSRRGIAMVFQSYALYPHMTVYENMAFGMQLAGKDKQQCRKRVEAAAEM 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L + R+P QLSGGQ+QRVA+ RA+V +P+V L DEPLSNLDA +R + R+EI ++
Sbjct: 121 LQLTPYLERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRLEIAKLH 180
Query: 179 KELGITTM-YVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
+ + TTM YVTHDQ EAM ++DRI V+ G +EQ+G PLELY P + FVA F+G+
Sbjct: 181 RSMHKTTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPLELYETPNSVFVAGFIGSP-- 238
Query: 238 LKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVE--AEVMDYEILPGRIRFR 295
K+ +G +G+ R E +EI ++G E V+ E+L
Sbjct: 239 -KMNFLSGAFAEPYKADTIGI--------RAEHLEIDEQGGEWSGTVIHSEMLGSDSYIY 289
Query: 296 LSVQGKE--IIAEDSLARYE 313
L + E I+ E +A+++
Sbjct: 290 LDIGTGEPVIVRESGIAKHQ 309
>gi|7524830 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023607|sp|P56344|CYSA_CHLVU PROBABLE SULFATE
TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|7442559|pir||T07260 sulfate transport ATP-binding
protein - Chlorella vulgaris chloroplast
>gi|2224423|dbj|BAA57907.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 232 bits (585), Expect = 5e-60
Identities = 112/230 (48%), Positives = 164/230 (70%), Gaps = 2/230 (0%)
Query: 6 LRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGR 63
+ + K+F F+ RV+LE+K+G L+ +LGPSG GK+T LR++AGLE+PD G + +G+
Sbjct: 5 IENISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQ 64
Query: 64 DVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKG 123
D T + R IGFVFQ+YALFPH+ V +NVAFGLE++K+ +++V E+L+L+ L+
Sbjct: 65 DATQMKLQDREIGFVFQNYALFPHLTVSENVAFGLEIQKIDSLLKKKRVNELLKLMQLEK 124
Query: 124 FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGI 183
F + P QLSGGQ+QRVALARAL +EP+VLLLDEP + LDAK+R+ LR ++ + ++ +
Sbjct: 125 FGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRSWLRELHHKISV 184
Query: 184 TTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
TT++VTHD EAM ++ I ++ G+I Q+G EL +P FV FLG
Sbjct: 185 TTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQELSDHPTNTFVTNFLG 234
>emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [Streptomyces
coelicolor A3(2)]
Length = 378
Score = 232 bits (585), Expect = 5e-60
Identities = 121/266 (45%), Positives = 174/266 (64%), Gaps = 12/266 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+D+++ DGE + ++GPSGCGK+T+LR++AGLE + G + RDVT LPP R+I VF
Sbjct: 24 LDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDIAMVF 83
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YAL+PHM+V N+ F L++ + + EI +KV E +++ L + +R P+ LSGGQ+QR
Sbjct: 84 QNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKPKALSGGQRQR 143
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VA+ RA+V EP+V L+DEPLSNLDAK+R S R +I +Q+ LGITT+YVTHDQ EAM +
Sbjct: 144 VAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVTHDQVEAMTMG 203
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLKLRSTNGVACLGELCFNVG 257
DR+AV+ G ++QV P +Y P FVA F+G+ NL+++ T+G G V
Sbjct: 204 DRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFGNSVVPVN 263
Query: 258 VDG----------PVKVFFRPESVEI 273
D V V RPE ++
Sbjct: 264 RDALKAASDKGDRTVTVGVRPEHFDV 289
>dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens]
Length = 369
Score = 232 bits (585), Expect = 5e-60
Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 3/237 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M + L+ + K +PG V +LE+ D E I +GPSGCGK+TTLR+IAGLE KG
Sbjct: 1 MANLSLKHIYKVYPGDVTAVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISKGE 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ R V + P R+I VFQ YAL+PHM V+ N+AFGL++RK+P+ EI++KV++ +
Sbjct: 61 LYIGDRLVNEVEPKERDIAMVFQSYALYPHMTVYDNMAFGLKLRKVPKDEIDKKVKDAAK 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++ ++ +R P+ LSGGQ+QRVAL RA+V EP+V L+DEPLSNLDAK+R +R EI ++
Sbjct: 121 ILDIEHLLDRKPKALSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRTEISKL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
+ L T +YVTHDQ EAM + RI VM G ++QV P E+Y NP FVA F+G+
Sbjct: 181 HQRLQTTFIYVTHDQVEAMTMGTRIVVMKDGIVQQVDSPQEIYNNPANIFVAGFIGS 237
>pir||S63613 probable ATP-binding protein cymD - Klebsiella oxytoca
>gi|854231|emb|CAA60003.1| (X86014) cymD [Klebsiella
oxytoca]
Length = 376
Score = 231 bits (583), Expect = 9e-60
Identities = 119/245 (48%), Positives = 165/245 (66%), Gaps = 8/245 (3%)
Query: 1 MVRVELRGVEKKFP-GFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M V LR +EK++ GFK +DLE+ DGE + +GPSGC K+TTLR+IAGLE G
Sbjct: 1 MATVSLRKIEKRYENGFKAVHGIDLEIHDGEFMVFVGPSGCAKSTTLRMIAGLEDISGGE 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ R V LPP R I VFQ+YAL+PH VF N+AFGL+++K P+ EI+R+V + E
Sbjct: 61 IYIGNRKVNDLPPKDRGIAMVFQNYALYPHKTVFDNMAFGLKMQKRPKDEIKRRVEDAAE 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + R P+++SGGQ+QRVA+ RA+V +P+V L DEPLSNLDAK+R S+RM+I ++
Sbjct: 121 KLEITELLYRKPKEMSGGQRQRVAVGRAIVRKPDVFLFDEPLSNLDAKLRVSMRMKIAQL 180
Query: 178 QKEL-----GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+ L T +YVTHDQ EA+ + DRI V+N G I QV P +LY P +FVA F+
Sbjct: 181 HRSLKEEGHPATMIYVTHDQTEALTLGDRICVLNHGNIMQVDTPTDLYNYPNNKFVASFI 240
Query: 233 GTGNL 237
G+ ++
Sbjct: 241 GSPSI 245
>gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae]
Length = 373
Score = 230 bits (581), Expect = 1e-59
Identities = 128/328 (39%), Positives = 197/328 (60%), Gaps = 32/328 (9%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V L+ V K + + VDLE+++GE + +GPSGCGK+T LR IAGLE G++
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ + + P R +G VFQ YAL+PH+N++ N++FGL++ K + EI+++V E+
Sbjct: 61 YIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L +R P+ LSGGQ+QRVA+ R LV +P V LLDEPLSNLDA +R +R EI ++Q
Sbjct: 121 LQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL- 237
++LG T +YVTHDQ EAM ++D+I V++ G + QVG+PLELY+ P+ FVA F+G+ +
Sbjct: 181 RKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMN 240
Query: 238 -------------LKLRSTNGVACLGELCFNVGVDGP-------VKVFFRPE---SVEIG 274
++++ +NG F + VDG + + RPE E G
Sbjct: 241 FMSVFIEGVEKDRVQVQLSNGTT------FWIPVDGTTVTRGERMSLGIRPEHLVEAEHG 294
Query: 275 KEGVEAEVMDYEILPGRIRFRLSVQGKE 302
+E +VM E L + ++++G +
Sbjct: 295 DAKIEGKVMIVEKLGNETQVYMNLKGSD 322
>pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding protein VCA0946
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9658383|gb|AAF96842.1| (AE004421)
maltose/maltodextrin ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 373
Score = 230 bits (581), Expect = 1e-59
Identities = 128/328 (39%), Positives = 197/328 (60%), Gaps = 32/328 (9%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V L+ V K + + VDLE+++GE + +GPSGCGK+T LR IAGLE G++
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ + + P R +G VFQ YAL+PH+N++ N++FGL++ K + EI+++V E+
Sbjct: 61 YIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L +R P+ LSGGQ+QRVA+ R LV +P V LLDEPLSNLDA +R +R EI ++Q
Sbjct: 121 LQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQ 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL- 237
++LG T +YVTHDQ EAM ++D+I V++ G + QVG+PLELY+ P+ FVA F+G+ +
Sbjct: 181 RKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMN 240
Query: 238 -------------LKLRSTNGVACLGELCFNVGVDGP-------VKVFFRPE---SVEIG 274
++++ +NG F + VDG + + RPE E G
Sbjct: 241 FMSVFIEGVEKDRVQVQLSNGTT------FWIPVDGTTVTRGERMSLGIRPEHLVEAEHG 294
Query: 275 KEGVEAEVMDYEILPGRIRFRLSVQGKE 302
+E +VM E L + ++++G +
Sbjct: 295 DAKIEGKVMIVEKLGNETQVYMNLKGSD 322
>pir||T45204 probable sugar ABC transporter ugpC [imported] - Mycobacterium
leprae >gi|699112|gb|AAA62878.1| (U15180) ugpC gene
product [Mycobacterium leprae]
Length = 392
Score = 229 bits (579), Expect = 3e-59
Identities = 137/330 (41%), Positives = 189/330 (56%), Gaps = 10/330 (3%)
Query: 1 MVRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M + L V K +P V + V DGE + ++GPSGCGKTTTL +IAGLE G
Sbjct: 1 MAEIVLEHVNKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMIAGLEDISSGE 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ DG V P R+I VFQ YAL+PHM V +N+AF L + K+ + EI +KV E +
Sbjct: 61 LRIDGDRVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLMLAKVKKAEIAQKVSETAQ 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++ L +R P QLSGGQ+QRVA+ RA+V P+ L+DEPLSNLDAK+R R EI R+
Sbjct: 121 ILDLTDLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVRTRGEIARL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG-- 235
Q+ LG TT+YVTHDQ EAM + DR+ VM G ++Q+G P ELY P FVA F+G+
Sbjct: 181 QRRLGATTVYVTHDQTEAMTLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGFIGSPVM 240
Query: 236 NLLKLRST-NGVAC-LGELCFNVGVDGPVKVFFRPESVEIG---KEGVEAEVMDYEILPG 290
N + T NG+ LGEL + V + P+ V +G + +A+++D
Sbjct: 241 NFFPAKLTPNGLTLPLGELNLSRDVQAMIGQHPVPDRVIVGVRPEHLTDAKLIDAHQHGT 300
Query: 291 RIRFRLSVQGKEIIAEDSLARYEEIPKKVY 320
+ F++ V E + D + VY
Sbjct: 301 VLTFKVKVDLVESLGADKYIYFTTTGCDVY 330
>sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDING PROTEIN UGPC
>gi|43249|emb|CAA31534.1| (X13141) ugpC protein (AA
1-356) [Escherichia coli]
Length = 356
Score = 228 bits (576), Expect = 6e-59
Identities = 117/250 (46%), Positives = 174/250 (68%), Gaps = 7/250 (2%)
Query: 1 MVRVELRGVEKKFPGFKLRV----DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M ++L+ V K + G K +V L+V DGE I ++GPSGCGK+T LR++AGLER +G
Sbjct: 1 MAGLKLQAVTKSWDG-KTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEG 59
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
++ + + VT + P R I VFQ+YAL+PHM+V +N+A+GL++R + +++I +V+E
Sbjct: 60 DIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAA 119
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
++ L G R P +LSGGQ+QRVA+ RA+V +P V L DEPLSNLDAK+R +R+E+++
Sbjct: 120 RILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQ 179
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG- 235
+ + L T++YVTHDQ EAM ++ R+ VMN G EQ+G P+E+Y P + FVA F+G+
Sbjct: 180 LHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPA 239
Query: 236 -NLLKLRSTN 244
NLL R N
Sbjct: 240 MNLLTGRVNN 249
>pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protein - Escherichia
coli >gi|912455|gb|AAB18425.1| (U00039) CG Site No.
17794 [Escherichia coli] >gi|1789859|gb|AAC76475.1|
(AE000421) ATP-binding component of sn-glycerol
3-phosphate transport system [Escherichia coli K12]
Length = 369
Score = 228 bits (576), Expect = 6e-59
Identities = 117/250 (46%), Positives = 174/250 (68%), Gaps = 7/250 (2%)
Query: 1 MVRVELRGVEKKFPGFKLRV----DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M ++L+ V K + G K +V L+V DGE I ++GPSGCGK+T LR++AGLER +G
Sbjct: 14 MAGLKLQAVTKSWDG-KTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEG 72
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
++ + + VT + P R I VFQ+YAL+PHM+V +N+A+GL++R + +++I +V+E
Sbjct: 73 DIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAA 132
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
++ L G R P +LSGGQ+QRVA+ RA+V +P V L DEPLSNLDAK+R +R+E+++
Sbjct: 133 RILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQ 192
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG- 235
+ + L T++YVTHDQ EAM ++ R+ VMN G EQ+G P+E+Y P + FVA F+G+
Sbjct: 193 LHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPA 252
Query: 236 -NLLKLRSTN 244
NLL R N
Sbjct: 253 MNLLTGRVNN 262
>pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648888|emb|CAB03654.1| (Z81331) ugpC [Mycobacterium
tuberculosis]
Length = 360
Score = 228 bits (575), Expect = 8e-59
Identities = 123/285 (43%), Positives = 175/285 (61%), Gaps = 8/285 (2%)
Query: 1 MVRVELRGVEKKFPGFKL----RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M V+ V +++PG +DL++ DGE + ++GPSGCGK+TTLR++AGLE + G
Sbjct: 1 MANVQYSAVTQRYPGADAPTVDNLDLDIADGEFLVLVGPSGCGKSTTLRVLAGLEPIESG 60
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
+ DVT LPP +R++ VFQ+YAL+P+M V N+ F L + R + R+V EV
Sbjct: 61 RISIGDVDVTHLPPRARDVAMVFQNYALYPNMTVAANMGFALRNAGMSRADTRRRVLEVA 120
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
+++ L +R P +LSGGQ+QRVA+ RA+V P V +DEPLSNLDAK+R S R +I
Sbjct: 121 DMLELTDLLDRKPAKLSGGQRQRVAMGRAIVRRPRVFCMDEPLSNLDAKLRVSTRSQISG 180
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG- 235
+Q+ LG TT+YVTHDQ EAM + DR+AV+ G ++QV P LY +P FVA F+G
Sbjct: 181 LQRRLGTTTVYVTHDQVEAMTMGDRVAVLKDGVLQQVDTPRALYDDPVNTFVATFIGAPA 240
Query: 236 -NLLKLRSTNGVACLGELCFNVGVDGPVKVF--FRPESVEIGKEG 277
NL+ +GV +L V +V RPES ++ G
Sbjct: 241 MNLIDAAVAHGVVRAPDLAIPVPDPAAERVLVGVRPESWDVASIG 285
>pir||T03479 probable ABC transporter ATP-binding protein - Rhodobacter
capsulatus >gi|3128280|gb|AAC16132.1| (AF010496)
hypothetical ABC transporter ATP-binding protein
[Rhodobacter capsulatus]
Length = 358
Score = 228 bits (575), Expect = 8e-59
Identities = 130/315 (41%), Positives = 189/315 (59%), Gaps = 13/315 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT----FLPPYSRNI 75
+ + GE++ +LG SGCGK+T LR+IAG+ERPD G ++ GR + F+ P +R I
Sbjct: 30 ISFNLGQGEILCLLGASGCGKSTLLRLIAGVERPDSGEIVLAGRVLAGPGRFVDPEARGI 89
Query: 76 GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGG 135
GF+FQDYALFPH++V +NVAFGL R P E++ +V EVL + G+ +R P QLSGG
Sbjct: 90 GFMFQDYALFPHLSVAENVAFGL--RGAPSAELKARVAEVLAVAGVSALADRYPHQLSGG 147
Query: 136 QQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEA 195
+ QRVALARAL P +LL+DEP SNLD +R+S+R E + +++G+ + VTHD EA
Sbjct: 148 ESQRVALARALAPRPGLLLMDEPFSNLDQGLRDSVRAETLALLRQIGVAAILVTHDPAEA 207
Query: 196 MAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNG--VACLGELC 253
+A++D +AVM G+IE + P LY+ P T + A+FLG G+ L + G V LG
Sbjct: 208 LAVADHLAVMQAGKIEALADPRSLYHAPPTLYAARFLGPGSTLPGQVAGGALVTPLGRFA 267
Query: 254 FNVGVDGPVKV-FFRPESVEI--GKEGVEAEVMDYEILPG--RIRFRLSVQGKEIIAEDS 308
+G V FFRP+++ + G A + E L R+ RL G E+ +
Sbjct: 268 APGLAEGQAAVAFFRPQALALCDPAAGAPARIERAEFLGAQERLVLRLEAGGVELRLDLP 327
Query: 309 LARYEEIPKKVYIKV 323
R P +V +++
Sbjct: 328 STRQPRPPGRVGLRL 342
>dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 378
Score = 227 bits (573), Expect = 1e-58
Identities = 116/298 (38%), Positives = 188/298 (62%), Gaps = 7/298 (2%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+++ +K+GE ++GPSGCGK+T LR+IAGLE G + G LPP RN+ VF
Sbjct: 23 INVSIKEGEFFILVGPSGCGKSTMLRMIAGLEDISAGELKIHGATANHLPPSKRNLSMVF 82
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YAL+PH+ V +N+ FGL+VRK+ + E + + ++GL + R P +LSGGQ+QR
Sbjct: 83 QNYALYPHLTVEENILFGLKVRKVKKAERSERCQRAAAMLGLTDYLKRKPRELSGGQRQR 142
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VALARA+V E + L+DEPLSNLDAK+R +R EI+++Q++LG+T +YVTHDQ EAM +
Sbjct: 143 VALARAVVSEAPLCLMDEPLSNLDAKLRGHMRTEIRQLQRQLGMTMIYVTHDQVEAMTMG 202
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRST----NGVACLGELCFN 255
DRI V+ G+++QVG PL++Y P FVA F+G + ++T N +G L
Sbjct: 203 DRIMVLKDGQVQQVGSPLDIYNAPANLFVATFIGAPPMNIAKATVDRMNRELAIGSL--R 260
Query: 256 VGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYE 313
+ ++ + + ++V++G + D P +++ +++ E++ ++L ++
Sbjct: 261 LPIEEQLLMRISSDTVQLGIRPEQIARADAP-TPEHVQWHVTLTNVEVLGNETLLAFK 317
>gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 314
Score = 226 bits (570), Expect = 3e-58
Identities = 133/327 (40%), Positives = 193/327 (58%), Gaps = 27/327 (8%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ L+ V K F FK+ + L V+ GE ILG SG GKTT LR+IAGLE+ G +L
Sbjct: 2 ITLKEVTKFFGSFKVIDSISLNVEKGEFFVILGKSGSGKTTLLRLIAGLEKVSSGKILIS 61
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
DVT LPP R+IG VFQ YAL+P+ VF+N+ LE ++ +K+ E ++ E+ + + +
Sbjct: 62 NEDVTDLPPSKRDIGMVFQSYALYPNKKVFENLMIALENSEINKKDKEERIIEISKQLEI 121
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
++ P QLSGGQQQRVA+A+ALV P+VLL+DEPLSNLD ++R S R IK++QKE
Sbjct: 122 YHLMDKYPAQLSGGQQQRVAIAKALVKRPKVLLMDEPLSNLDVQLRYSARKLIKKVQKEF 181
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
ITT+YVTHD EA+AI+DRI V++ GR+ QVG P ++Y NP ++ VA +G + ++
Sbjct: 182 NITTIYVTHDSNEALAIADRIGVIDKGRLLQVGIPEDIYNNPLSKEVASLVGNPPMSFVK 241
Query: 242 STNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMD--------YEILPGRIR 293
+DG + + RP+++ I G ++ Y I I
Sbjct: 242 ----------------IDGKI-IGVRPDNIIIKDNGTYEGIVSNCEFWGSYYLIYIDFID 284
Query: 294 FRLSVQGKEIIAEDSLARYEEIPKKVY 320
+ KE I E S +++ I KV+
Sbjct: 285 NEVKAISKERIKEGSKVKFDFISYKVF 311
>pir||E70952 probable sugC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2695824|emb|CAA15894.1| (AL021006) sugC
[Mycobacterium tuberculosis]
Length = 393
Score = 226 bits (570), Expect = 3e-58
Identities = 123/281 (43%), Positives = 170/281 (59%), Gaps = 7/281 (2%)
Query: 1 MVRVELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M + L V K +P V +L + DGE + ++GPSGCGKTTTL +IAGLE G
Sbjct: 1 MAEIVLDHVNKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSGE 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ G V P R+I VFQ YAL+PHM V +N+AF L + K+ + +I +KV E +
Sbjct: 61 LRIAGERVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAKMRKADIAQKVSETAK 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++ L +R P QLSGGQ+QRVA+ RA+V P+ L+DEPLSNLDAK+R +R EI ++
Sbjct: 121 ILDLTNLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
Q+ LG TT+YVTHDQ EAM + DR+ VM G +Q+G P ELY P FVA F+G+ +
Sbjct: 181 QRRLGTTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGFIGSPAM 240
Query: 238 ----LKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIG 274
+L + GE+ V G + +PE+V +G
Sbjct: 241 NFFPARLTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVG 281
>pir||MMECMK inner membrane protein malK - Escherichia coli
>gi|409797|gb|AAC43129.1| (U00006) cytoplasmic membrane
protein for maltose uptake [Escherichia coli]
>gi|1790467|gb|AAC77005.1| (AE000476) ATP-binding
component of transport system for maltose [Escherichia
coli K12]
Length = 371
Score = 226 bits (569), Expect = 4e-58
Identities = 112/236 (47%), Positives = 162/236 (68%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+L+ V K + + D L++ +GE + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ + PP R +G VFQ YAL+PH++V +N++FGL++ ++ I ++V +V E+
Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L +R P+ LSGGQ+QRVA+ R LV EP V LLDEPLSNLDA +R +R+EI R+
Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K LG T +YVTHDQ EAM ++D+I V++ GR+ QVG+PLELY+ P FVA F+G+
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGS 236
>sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|2052275|emb|CAA38188.1| (X54292) malK [Salmonella
typhimurium]
Length = 369
Score = 225 bits (568), Expect = 5e-58
Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+LR V K + + D L++ DGE + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ +PP R +G VFQ YAL+PH++V +N++FGL++ ++ + ++V +V E+
Sbjct: 61 FIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVMNQRVNQVAEV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L R P+ LSGGQ+Q VA+ R LV EP V LLDEPLSNLDA +R +R+EI R+
Sbjct: 121 LQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K LG T +YVTHDQ EAM ++D+I V++ GR+ QVG+PLELY+ P FVA F+G+
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGS 236
>sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
Length = 371
Score = 224 bits (566), Expect = 9e-58
Identities = 112/236 (47%), Positives = 161/236 (67%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+L+ V K + + D L++ +GE + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ + PP R +G VFQ YAL+PH++V +N++FGL+ ++ I ++V +V E+
Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRVNQVAEV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L +R P+ LSGGQ+QRVA+ R LV EP V LLDEPLSNLDA +R +R+EI R+
Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K LG T +YVTHDQ EAM ++D+I V++ GR+ QVG+PLELY+ P FVA F+G+
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGS 236
>pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1000120|gb|AAB41280.1| (U32936) orf 363
[Synechocystis PCC6803] >gi|1653830|dbj|BAA18741.1|
(D90916) ATP binding protein responsible for multiple
sugar import [Synechocystis sp.]
Length = 363
Score = 224 bits (566), Expect = 9e-58
Identities = 112/236 (47%), Positives = 159/236 (66%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V V K+F + ++LE++DGE + +GPSGCGKTT+LR++AGLE +G +
Sbjct: 1 MASVSFEQVTKQFDDYVAVNNLNLEIEDGEFLVFVGPSGCGKTTSLRLLAGLETVSQGQI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
R V L P R+I VFQ YAL+PHM+V++N+AF L+++ P++EI ++V EL
Sbjct: 61 CIGDRRVNELSPKDRDIAMVFQSYALYPHMSVYENMAFSLDLQGKPKEEIRQRVCSAAEL 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+G++ +R P++LSGGQ+QRVA+ RA+V +P V L+DEPLSNLDA +R R EI ++
Sbjct: 121 LGIEKLLHRKPKELSGGQRQRVAVGRAIVRKPSVFLMDEPLSNLDAMLRVQARKEISKLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
+L T +YVTHDQ EAM + DRIAVM G ++QV P LY P FVA F+G+
Sbjct: 181 SDLATTFIYVTHDQVEAMTMGDRIAVMKDGILQQVDSPANLYNQPANLFVAGFIGS 236
>gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC18650.1|
(AF242881) motB [Agrobacterium tumefaciens]
Length = 394
Score = 224 bits (566), Expect = 9e-58
Identities = 111/247 (44%), Positives = 167/247 (66%), Gaps = 2/247 (0%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ + GV K + K+ D L ++ GE +++LGPSG GKTT L +AG RPD G++ F
Sbjct: 44 ISIAGVTKSYGPVKVLSDINLHIRSGEFMTLLGPSGSGKTTLLMTLAGFIRPDFGSLKFG 103
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
+V P+ R +G +FQ+YALFPHM+V N+A+ L++R R+ I+ +VR+VLE V L
Sbjct: 104 EEEVILRAPHLRGVGMMFQNYALFPHMSVEANIAYPLKIRGEDRETIKARVRDVLETVQL 163
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
G+ +R +LSGGQ+QR+ALARA+V +P++LL+DEPLS LD +RE +++E++ + ++L
Sbjct: 164 GGYGSRRISELSGGQRQRIALARAIVFKPKILLMDEPLSALDKNLRELMQLELRTMHEQL 223
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
G+TT+ VTHDQ EA+ +SDRIAV+ G+I Q+ LY P +EFVA F+G + L +
Sbjct: 224 GMTTVLVTHDQREALTMSDRIAVLRNGKIAQIDTSETLYSEPNSEFVAAFMGESSFLTVE 283
Query: 242 STNGVAC 248
C
Sbjct: 284 HDGASFC 290
>gb|AAA93151.1| (U12007) MsiK [Streptomyces lividans]
Length = 314
Score = 222 bits (560), Expect = 4e-57
Identities = 119/266 (44%), Positives = 169/266 (62%), Gaps = 12/266 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
+D+++ DGE + ++GPSGCGK+T+LR++AGLE + G + RDVT LPP R+I VF
Sbjct: 24 LDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDIAMVF 83
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+YAL+PHM+V N+ F L++ + + EI +KV E +++ L + +R P+ LSGGQ+QR
Sbjct: 84 QNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKPKALSGGQRQR 143
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VA+ RA+V EP+V L+DEPLSNLDAK+R S R +I +Q+ LGITT+YVTHDQ EAM +
Sbjct: 144 VAMGRAIVREPQVFLMDEPLSNLDAKLRLSTRTQIASLQRRLGITTVYVTHDQVEAMTMG 203
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--NLLKLRSTNGVACLGELCFNVG 257
DR+A QV P +Y P FVA F+G+ NL+++ T+G G V
Sbjct: 204 DRVASSRTVCSRQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFGNSVVPVN 263
Query: 258 VDG----------PVKVFFRPESVEI 273
D V V RPE ++
Sbjct: 264 RDALKAASDKGDRTVTVGVRPEHFDV 289
>sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCJV
>gi|7442507|pir||A64881 probable ABC-type transport
protein b1318 - Escherichia coli
>gi|1742155|dbj|BAA14893.1| (D90769) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1742163|dbj|BAA14900.1| (D90770) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1787577|gb|AAC74400.1| (AE000229) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 322
Score = 222 bits (560), Expect = 4e-57
Identities = 108/223 (48%), Positives = 157/223 (69%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQ 80
+LE+ D E I +GPSGCGK+TTLR+IAGLE G++L DG+ + +P +RNI VFQ
Sbjct: 24 NLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQ 83
Query: 81 DYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRV 140
+YAL+PHM V+ N+AFGL+++K+ ++ I+ +V +++GL+ + R P LSGGQ+QRV
Sbjct: 84 NYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRV 143
Query: 141 ALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISD 200
AL RA+V E V L+DEPLSNLDAK+R +R EI ++ ++L T +YVTHDQ EAM ++
Sbjct: 144 ALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMAT 203
Query: 201 RIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRST 243
RI +M G ++QVG P +Y P FV+ F+G+ + +R T
Sbjct: 204 RIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNFIRGT 246
>pir||E83248 probable ATP-binding component of ABC transporter PA3187 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949305|gb|AAG06575.1|AE004742_11 (AE004742)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 386
Score = 222 bits (560), Expect = 4e-57
Identities = 116/247 (46%), Positives = 164/247 (65%), Gaps = 6/247 (2%)
Query: 1 MVRVELRGVEKKFPGF---KLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M +ELR + K + LR + L++ GE + ++GPSGCGK+T + IAGLE G
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGG 60
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
+L DG+D++ + P R+I VFQ YAL+P M+V +N+AFGL++RK+P+ I+ +V V
Sbjct: 61 AILVDGQDISGMSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVA 120
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
L+ ++ R P QLSGGQQQRVA+ RAL P+V L DEPLSNLDAK+R +R E+K
Sbjct: 121 RLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEPLSNLDAKLRVEMRTELKL 180
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG- 235
+ + L TT+YVTHDQ EAM + D++AVM G I+Q G P ++Y +P FVA F+G+
Sbjct: 181 MHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPANLFVASFIGSPP 240
Query: 236 -NLLKLR 241
N + LR
Sbjct: 241 MNFIPLR 247
>gb|AAC12799.1| (U67851) ChtG [Agrobacterium sp.] >gi|3153868|gb|AAC17431.1|
(AF065242) putative ABC type transporter ChtG
[Agrobacterium tumefaciens]
Length = 324
Score = 221 bits (558), Expect = 7e-57
Identities = 120/267 (44%), Positives = 169/267 (62%), Gaps = 5/267 (1%)
Query: 31 SILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNV 90
++LG SG GKTT L ++AG ++P +G VL G VT +PP+ R+IG VFQ+YALFPHM
Sbjct: 2 ALLGSSGSGKTTLLMLLAGFDQPSEGKVLMSGTSVTEVPPHRRSIGVVFQNYALFPHMTA 61
Query: 91 FKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEP 150
+NVA+ L++R + R E + +V+ L LV L P Q+SGGQQQRVALAR+LV P
Sbjct: 62 AENVAYPLKMRGVGRSERDERVKAALSLVNLTDRGASYPIQMSGGQQQRVALARSLVFGP 121
Query: 151 EVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
++LL+DEPL LD ++R+ ++ E+KRIQ ELGIT +YVTHDQ EAMA++DRI +M+ G +
Sbjct: 122 DILLMDEPLGALDRRLRDQMQHELKRIQHELGITVIYVTHDQSEAMAMADRIGIMSGGEL 181
Query: 211 EQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNG----VACLGELCFNVGVDGPVKVFF 266
QV P +Y P FVA+F+G ++L++ + + G P +
Sbjct: 182 LQVADPETIYAAPSNHFVARFIGDCSILRVTNLDEGRGYEIAGGRQLLPSPAKTPFDIVV 241
Query: 267 RPESVEIGKEGVEAEVMDYEILPGRIR 293
RPESV I + EA + +P IR
Sbjct: 242 RPESVSI-RSVAEANSDEGFAVPATIR 267
>gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPase [Pseudomonas aeruginosa]
Length = 269
Score = 220 bits (555), Expect = 2e-56
Identities = 116/251 (46%), Positives = 164/251 (65%), Gaps = 6/251 (2%)
Query: 1 MVRVELRGVEKKFPGF---KLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M +ELR + K + LR + L++ GE + ++GPSGCGK+T + IAGLE G
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGG 60
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
+L DG+D++ + P R+I VFQ YAL+P M+V +N+AFGL++RK+P+ I+ +V V
Sbjct: 61 AILVDGQDISGMSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVA 120
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKR 176
L+ ++ R P QLSGGQQQRVA+ RAL P+V L DE LSNLDAK+R +R E+K
Sbjct: 121 RLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEQLSNLDAKLRVEMRTELKL 180
Query: 177 IQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG- 235
+ + L TT+YVTHDQ EAM + D++AVM G I+Q G P ++Y +P FVA F+G+
Sbjct: 181 MHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPDNLFVASFIGSPP 240
Query: 236 -NLLKLRSTNG 245
N + LR G
Sbjct: 241 MNFIPLRLQRG 251
>pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106014|gb|AAF83877.1|AE003943_8 (AE003943) sugar
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 364
Score = 220 bits (555), Expect = 2e-56
Identities = 112/236 (47%), Positives = 157/236 (66%), Gaps = 3/236 (1%)
Query: 1 MVRVELRGVEKKFPGFKL---RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M +V+L + K + ++ V EV DGEL+ ++GPSGCGK+T LR+IAGLE G
Sbjct: 1 MAKVQLEAIRKVYDNGQVVVPGVSFEVADGELMVLVGPSGCGKSTLLRMIAGLEDISSGT 60
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ R V +PP RN+ VFQ YAL+PHM +N+AFGL++R + I +++ V E
Sbjct: 61 LRIGERVVNDVPPKDRNVAMVFQSYALYPHMTAAENLAFGLKLRGYSTEAIAERIKNVAE 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
++GL + +P+ +SGGQ+QRVAL RA+V E V LLDEPLSNLDAK+R S+R +I R+
Sbjct: 121 MLGLTSLLDTLPKAMSGGQRQRVALGRAMVRESAVFLLDEPLSNLDAKLRNSVRSDITRL 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
++LG T +YVTHDQ EAM + RI ++ G I+Q+ P+ LY +P FVA FLG
Sbjct: 181 HRKLGTTMIYVTHDQVEAMTLGHRIVLLKDGVIQQIDTPMVLYDHPANLFVAGFLG 236
>pir||T47062 hypothetical protein [imported] - Yersinia pestis
>gi|4106650|emb|CAA21405.1| (AL031866) ORF80, len=296
aa, 59.6% identity in 265 aa overlap with MalK E. coli
(371 aa), Fasta scores: opt: 1024, E(): 0 [Yersinia
pestis]
Length = 296
Score = 220 bits (554), Expect = 2e-56
Identities = 114/243 (46%), Positives = 160/243 (64%), Gaps = 9/243 (3%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + L V K+F ++ +VDLE+K+GE +GPSGCGK+T LR+IAGLE G +
Sbjct: 1 MSGIRLSNVFKRFHDTQVINQVDLEIKNGEFCVFIGPSGCGKSTLLRMIAGLETISSGEI 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ V L P R + VFQ YAL+PHM ++ N+AF L++ K EIER+V ++
Sbjct: 61 SIGDKVVNKLAPADRGVAMVFQSYALYPHMTIYDNMAFNLKLAKTEPAEIERRVLNAAKI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L+ R+P+ LSGGQ+QRVA+ RA+V P+V L DEPLSNLDA +R + R+EI ++
Sbjct: 121 LQLELLLQRLPKALSGGQRQRVAIGRAIVRNPDVFLFDEPLSNLDASLRVATRVEIAKLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRI-------AVMNFGRIEQVGRPLELYYNPKTEFVAKF 231
+LG T +YVTHDQ EAM ++D+I A++N G I Q G PLELY++P EFVA F
Sbjct: 181 HQLGNTMVYVTHDQVEAMTLADKIVLLNSGAAMLNEGSIAQTGHPLELYHHPVNEFVAGF 240
Query: 232 LGT 234
+G+
Sbjct: 241 IGS 243
>pir||S05329 inner membrane protein malK - Salmonella typhimurium
Length = 369
Score = 219 bits (553), Expect = 3e-56
Identities = 110/236 (46%), Positives = 157/236 (65%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+LR V K + + D L++ DGE + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ +PP R +G VFQ YAL+PH++V +N++F + ++ + ++V +V E+
Sbjct: 61 FIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFRPQAAGAKKEVMNQRVNQVAEV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L R P+ LSGGQ+Q VA+ R LV EP V LLDEPLSNLDA +R +R+EI R+
Sbjct: 121 LQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K LG T +YVTHDQ EAM ++D+I V++ GR+ QVG+PLELY+ P FVA F+G+
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGS 236
>sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK >gi|420867|pir||S34734
ATP-binding protein lacK - Agrobacterium radiobacter
Length = 363
Score = 219 bits (551), Expect = 5e-56
Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 2/236 (0%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V L + K + ++ V+LEV GE + +GPSGCGK+T LR+IAGLE G +
Sbjct: 1 MAEVRLTDIRKSYGSLEVIKGVNLEVSSGEFVVFVGPSGCGKSTLLRMIAGLEDISSGEL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
G + + P R I VFQ YAL+PHM V +N+ F L + + EIER+V ++
Sbjct: 61 TIGGTVMNDVDPSKRGIAMVFQTYALYPHMTVRENMGFALRFAGMAKDEIERRVNAAAKI 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L +R P+ LSGGQ+QRVA+ RA+V +P+V L DEPLSNLDA++R +R+EI R+
Sbjct: 121 LELDALMDRKPKALSGGQRQRVAIGRAIVRQPDVFLFDEPLSNLDAELRVHMRVEIARLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
KEL T +YVTHDQ EAM ++D+I VM G +EQVG PL LY +P FVA F+G+
Sbjct: 181 KELNATIVYVTHDQVEAMTLADKIVVMRGGIVEQVGAPLALYDDPDNMFVAGFIGS 236
>sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|78246|pir||S05328 inner membrane protein malK -
Enterobacter aerogenes (fragment)
Length = 294
Score = 217 bits (548), Expect = 1e-55
Identities = 113/236 (47%), Positives = 159/236 (66%), Gaps = 3/236 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+LR V K + + D LE++DGE + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLEIQDGEFVVFVGPSGCGKSTLLRMIAGLETVTSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ +PP R IG VFQ YAL+PH++V +N++FGL++ ++ I ++V +V E+
Sbjct: 61 FIGDTRMNDVPPAERGIGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVTQVAEV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L R + LSGGQ+ VA+ R LV EP V LLDEPLSNLDA +R +R+EI R+
Sbjct: 121 LQLAHLLERNRKALSGGQRPGVAI-RTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 179
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K LG T +YVTHDQ EAM ++D+I V++ GR+ QVG+PLELY+ P FVA F+G+
Sbjct: 180 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGS 235
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 217 bits (546), Expect = 2e-55
Identities = 109/238 (45%), Positives = 157/238 (65%), Gaps = 5/238 (2%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT-----FLPPYSRN 74
V + + G +LGPSG GKTT LR+IAGLE P G + FD V+ + P R
Sbjct: 26 VSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPTSGYIYFDNEAVSSPRRVMMSPEKRG 85
Query: 75 IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSG 134
I VFQ++AL+P+M VF N+AF L++ K+P+ +IE KV+EV E +GL G NR P++LSG
Sbjct: 86 IAMVFQNWALYPNMTVFDNIAFPLKLAKVPKDKIENKVKEVSEELGLSGVLNRYPKELSG 145
Query: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
GQ QR A+ARALV +P+VLLLDEP SNLDA++RES R +++IQ+E +TT+ V+HD +
Sbjct: 146 GQMQRTAIARALVKDPKVLLLDEPFSNLDAQIRESARALVRKIQRERKLTTLIVSHDPAD 205
Query: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGEL 252
AI+++ V+ G+ Q+G P E+Y P T+ +A+ G NL++ + A + L
Sbjct: 206 IFAIANKAGVIVNGKFAQIGTPTEIYEYPATDLIARLTGEINLIQAKIIENNAIIANL 263
>gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other inner membrane ATP
binding transport proteins [Escherichia coli]
Length = 322
Score = 217 bits (546), Expect = 2e-55
Identities = 106/223 (47%), Positives = 155/223 (68%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQ 80
+LE+ D E I + SGCGK+TTLR+IAGLE G++L DG+ + +P +RNI VFQ
Sbjct: 24 NLEIADKEFIVFVAASGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQ 83
Query: 81 DYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRV 140
+YAL+PHM V+ N+AFGL+++K+ ++ I+ +V +++GL+ + R P LSGGQ+QRV
Sbjct: 84 NYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRV 143
Query: 141 ALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISD 200
AL RA+V E V L+DEPLSNLDAK+R +R EI ++ ++L T +YVTHDQ EAM ++
Sbjct: 144 ALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMAT 203
Query: 201 RIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRST 243
RI +M G ++QVG P +Y P FV+ F+G+ + +R T
Sbjct: 204 RIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNFIRGT 246
>pir||F83203 probable ATP-binding component of ABC transporter PA3538 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949688|gb|AAG06926.1|AE004774_4 (AE004774) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 360
Score = 215 bits (542), Expect = 6e-55
Identities = 130/291 (44%), Positives = 171/291 (58%), Gaps = 16/291 (5%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT----FLPPYSRNI 75
+DL + G++ +LGPSGCGKTTTLR IAG E G + G ++ L P R I
Sbjct: 25 LDLHLNAGDIGCLLGPSGCGKTTTLRAIAGFEPVLAGQIELGGEVISRPGFTLAPEKRRI 84
Query: 76 GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGG 135
G VFQDYALFPH++V NV FG +RK P++E R VRE+LELV L R P +LSGG
Sbjct: 85 GMVFQDYALFPHLSVADNVGFG--IRKHPQRE--RLVRELLELVKLDHLAARHPHELSGG 140
Query: 136 QQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEA 195
QQQRVALARAL EP +LLLDEP SNLD ++R SL E++ I K G + + VTHDQEEA
Sbjct: 141 QQQRVALARALAPEPLLLLLDEPFSNLDVELRRSLSQEVREILKARGTSAILVTHDQEEA 200
Query: 196 MAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK--LRSTNGV-----AC 248
A+ D I V G +EQ P LY+ P T FVA F+G G ++ L S + V
Sbjct: 201 FAVCDHIGVFKEGHLEQWDTPYNLYHEPLTPFVASFVGQGYFIRGQLLSPDTVQTELGVI 260
Query: 249 LGELCFNVGVDGPVKVFFRPESVEIGKEG-VEAEVMDYEILPGRIRFRLSV 298
G +++ V V RP+ + +G ++A ++ L +RL +
Sbjct: 261 RGNRAYSLPSGSAVDVLLRPDDLVHAPQGELKARIVGKTFLGAATLYRLQL 311
>gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter; PotA2
[Halobacterium sp. NRC-1]
Length = 374
Score = 215 bits (541), Expect = 7e-55
Identities = 134/315 (42%), Positives = 175/315 (55%), Gaps = 20/315 (6%)
Query: 4 VELRGVEKKFPGFKLRVDLEV--KDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V L GV K + DL + + EL +++GPSGCGKTTTLR+I+G E P +G + +
Sbjct: 25 VRLDGVRKTYGDTTAVADLTLTLRRNELFTLVGPSGCGKTTTLRLISGFESPTEGTIRIN 84
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRK-LPRKEIERKVREVLELVG 120
G T +PP R+ VFQ +ALF HM+V +NV +GLE + E+ R+V L+LV
Sbjct: 85 GEPATGVPPERRDTNLVFQQHALFSHMSVAENVGYGLEKDPDVGADEVARRVESALDLVN 144
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L R P LSGGQQQRVALARALV EP VLLLDEPLS+LD +R+ ++ E++R+
Sbjct: 145 LTESGERSPGALSGGQQQRVALARALVNEPAVLLLDEPLSSLDRTLRKQMQAELRRLSDA 204
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
+ + YVTHDQE AMA+SDRI VM G + QVG P +Y NP + FVA F+G L+
Sbjct: 205 VEGSFCYVTHDQELAMAVSDRIGVMRDGELVQVGTPAAVYRNPASPFVASFIGDTTLVD- 263
Query: 241 RSTNGVACLGELCFNVG----------VDGPVKVFFRPESV-----EIGKEGVEAEVMDY 285
T A G VG G V RPE V EA V +
Sbjct: 264 -GTVEPAAGGAPTLTVGDWVTVPVATDATGTVTASIRPEMVARTDDAAADHAFEAVVRER 322
Query: 286 EILPGRIRFRLSVQG 300
+R+RL+ G
Sbjct: 323 TFQGEAVRYRLAPVG 337
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 214 bits (539), Expect = 1e-54
Identities = 132/342 (38%), Positives = 202/342 (58%), Gaps = 20/342 (5%)
Query: 1 MVRVELRGVEKKFPGFKLRV------DLEVKDGELISILGPSGCGKTTTLRIIAGLERPD 54
M V+L + K++ K +V +LE++ GE + ILGPSG GKTT L+IIAGL R D
Sbjct: 2 MSYVKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQD 61
Query: 55 KGNVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVRE 114
KG+V G V LPP R + V Q+YA++P M+V+ N+AF L+V L + EI+++V E
Sbjct: 62 KGHVYLRGEVVDDLPPKDRRVAMVPQNYAIYPFMSVYDNIAFPLKVMHLSKDEIKKRVLE 121
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
V ++ + R P QLSGGQ QRVA+ARALV +++L+DEPLSNLDA+VR R E+
Sbjct: 122 VARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRVVAREEL 181
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
K++Q++L T +YVTHDQ EA++++ ++A+++ G ++ G P+E+Y P + +V FLG
Sbjct: 182 KQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKRPNSAWVGSFLGN 241
Query: 235 GNLLKLRSTNGVACLGELCFNVGVDGPVK----------VFFRPESVEIGKEG-VEAEVM 283
+ +R + + +G+ K V RPE +EI G +E +V
Sbjct: 242 PPMNIIRGEIEGDSIIIDSYRIGLPEEYKNLVKNGQKVLVGVRPEDMEIRNSGEIEGKVE 301
Query: 284 DYEILP--GRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKV 323
E L I +++ + + E SL+R E +KV I +
Sbjct: 302 MVEDLGPYSIIHLKINEETTIRVIEKSLSRRER-GEKVRISI 342
>gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]
Length = 336
Score = 214 bits (539), Expect = 1e-54
Identities = 124/294 (42%), Positives = 180/294 (61%), Gaps = 9/294 (3%)
Query: 22 LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQD 81
L V E+I +LG SGCGKTT L+ IAGL ++G++ G + R IG +FQD
Sbjct: 24 LAVNQNEIICLLGASGCGKTTLLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIGLIFQD 83
Query: 82 YALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVA 141
YALFPH+ V N+ FGL KLP+ + + ++L +V L+GFE+R P +LSGGQQQRVA
Sbjct: 84 YALFPHLTVADNIQFGLS--KLPKVQQKAITEKMLSVVHLQGFESRFPHELSGGQQQRVA 141
Query: 142 LARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDR 201
+ARAL +PE+LLLDEP SN+D++ R ++ EIK+I K + ++VTH +EEA A +D+
Sbjct: 142 IARALACQPELLLLDEPFSNIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADK 201
Query: 202 IAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRST-NGVAC--LGELCFNVGV 258
IAVM+ G+I Q G+P ELY++P FVA FLG N L T + V C +GE +
Sbjct: 202 IAVMDQGKIIQFGKPNELYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEFRLFPEM 261
Query: 259 D---GPVKVFFRPESVEIGKEGVE-AEVMDYEILPGRIRFRLSVQGKEIIAEDS 308
+ G + RPE + + + +V+ L R+++ ++G EI+ S
Sbjct: 262 NVQKGRYRWLLRPEQIILKPNELGLGKVVGKLFLGLYYRYQVEIKGIEIVTYQS 315
>pir||T35450 ABC transporter ATP binding protein - Streptomyces coelicolor
>gi|3319738|emb|CAA19904.1| (AL031035) ABC transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 348
Score = 210 bits (530), Expect = 1e-53
Identities = 112/236 (47%), Positives = 151/236 (63%), Gaps = 2/236 (0%)
Query: 4 VELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ L G +F G + D L V + E++ +LGPSG GK+T LR +AGL+ D G V D
Sbjct: 6 LSLEGATVRFGGRAVLDDVGLGVAEHEVVCVLGPSGSGKSTLLRAVAGLQPLDAGRVTLD 65
Query: 62 GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
GRD + +P + R +G +FQD+ LFP +V N+AFG +R R E + +V E+L+LVGL
Sbjct: 66 GRDQSGVPAHKREVGLMFQDHQLFPQRDVAGNIAFGPRMRGASRAEQQARVAELLQLVGL 125
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
G R LSGG+QQRVALARAL P +L+LDEPL LD +RE L +E++ + L
Sbjct: 126 PGAARRSVAALSGGEQQRVALARALAPRPRLLMLDEPLGQLDRSLRERLVVELRELFGRL 185
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
G T + VTHDQ EA A++DR+ VM GRI Q G PLE++ P FVA+FLG N+
Sbjct: 186 GTTVLAVTHDQGEAFALADRVVVMRDGRIAQSGTPLEVWQRPADAFVARFLGFENV 241
>pir||T36808 probable sugar transport system ATP-binding chain - Streptomyces
coelicolor >gi|5441781|emb|CAB46805.1| (AL096811)
putative ABC sugar transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 445
Score = 206 bits (519), Expect = 3e-52
Identities = 105/239 (43%), Positives = 152/239 (62%), Gaps = 1/239 (0%)
Query: 19 RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFV 78
R+ L++ GE + +LGPSGCGK+T LR+IAGLE +G + DG L P R + V
Sbjct: 23 RLSLDIAPGEFLVLLGPSGCGKSTVLRMIAGLEEITEGELTLDGAYANDLLPAERRMAMV 82
Query: 79 FQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQ 138
FQ++AL+P+M N+ F L V P+ + +V ++G++ +R+P QLSGG++Q
Sbjct: 83 FQNFALYPNMTTRGNIGFPLRVED-PQTDHTPRVDATARMLGIEDLLDRLPAQLSGGERQ 141
Query: 139 RVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAI 198
RVA+ RA+ P L+DEPLSNLDAK+R LR EI R+ +ELG+TT+YVTHDQ EAM++
Sbjct: 142 RVAMGRAISRHPTAFLMDEPLSNLDAKLRNHLRAEITRLTRELGVTTIYVTHDQSEAMSL 201
Query: 199 SDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVG 257
DR+AV+ G ++QV P +Y P+ FVA F+GT + LR G + ++G
Sbjct: 202 GDRVAVLRGGVLQQVDTPRAVYALPRNVFVAAFIGTPRINLLRGLVRAPLDGAMTISLG 260
>gb|AAB59057.1| (J01648) malK [Escherichia coli]
Length = 370
Score = 206 bits (518), Expect = 4e-52
Identities = 103/219 (47%), Positives = 149/219 (68%), Gaps = 2/219 (0%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M V+L+ V K + + D L++ +GE + +GPSGCGK+T LR+IAGLE G++
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
+ + PP R +G VFQ YAL+PH++V +N++FGL+ ++ I ++V +V E+
Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRVNQVAEV 120
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
+ L +R P+ LSGGQ+QRVA+ R LV EP V LLDEPLSNLDA +R +R+EI R+
Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPL 217
K LG T +YVTHDQ EAM ++D+I V++ GR+ QVG+PL
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPL 219
>sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFUC >gi|72462|pir||QRSEUC
nucleotide-binding protein sfuC - Serratia marcescens
>gi|152862|gb|AAA26575.1| (M33815) iron transport
protein (sufC) [Serratia marcescens]
Length = 345
Score = 205 bits (516), Expect = 6e-52
Identities = 119/284 (41%), Positives = 170/284 (58%), Gaps = 13/284 (4%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +EL G+ K + ++ +DL+V G +I+GPSG GKTT LRIIAG E PD G +
Sbjct: 1 MSTLELHGIGKSYNAIRVLEHIDLQVAAGSRTAIVGPSGSGKTTLLRIIAGFEIPDGGQI 60
Query: 59 LFDGRDVT----FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVRE 114
L G+ + ++P + R IGFV QD ALFPH V N+ FGL+ K +E +R++
Sbjct: 61 LLQGQAMGNGSGWVPAHLRGIGFVPQDGALFPHFTVAGNIGFGLKGGK---REKQRRIEA 117
Query: 115 VLELVGL-KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
++E+V L + P +LSGGQQQRVALARAL +P ++LLDEP S LD +R + R
Sbjct: 118 LMEMVALDRRLAALWPHELSGGQQQRVALARALSQQPRLMLLDEPFSALDTGLRAATRKA 177
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
+ + E + ++ VTHDQ EA++ +D++AVM GR+ QVG P +LY P E A FLG
Sbjct: 178 VAELLTEAKVASILVTHDQSEALSFADQVAVMRSGRLAQVGAPQDLYLRPVDEPTASFLG 237
Query: 234 TGNLLKLRSTNGVA--CLGELCFNVGV-DGPVKVFFRPESVEIG 274
+L +G A LG + + GP ++ RPE ++IG
Sbjct: 238 ETLVLTAELAHGWADCALGRIAVDDRQRSGPARIMLRPEQIQIG 281
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 205 bits (515), Expect = 8e-52
Identities = 129/309 (41%), Positives = 177/309 (56%), Gaps = 22/309 (7%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V L V K++ F ++L V+ GEL++++GPSG GKTTTLR+I L PD+G VL +
Sbjct: 9 VVLENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLIN 68
Query: 62 GRDVTFLPPYS--RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
G+D++ + RNIG+V Q LFPHM V++N+ ++ ++I ++V E+L+LV
Sbjct: 69 GQDISEIDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDELLKLV 128
Query: 120 GLK-GFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
L F R P QLSGGQQQRV LARAL + P +LL+DEP LD +R+ L+ E RI+
Sbjct: 129 DLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEFARIK 188
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL 238
+ELG T ++VTHD EEA + DRIA+MN GR+ QVG P EL NP EFV G
Sbjct: 189 EELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPANEFVEDITGARRKF 248
Query: 239 KLRSTNGV-----ACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIR 293
+ T V + L N+ V +K E K GVE +D GR
Sbjct: 249 RHLDTLKVKDFMISAEKYLIQNMEVAEALK--------EFRKRGVEVGFLD----SGRAV 296
Query: 294 FRLSVQGKE 302
F + G+E
Sbjct: 297 FLKDIAGRE 305
>emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding protein
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 205 bits (515), Expect = 8e-52
Identities = 122/280 (43%), Positives = 162/280 (57%), Gaps = 9/280 (3%)
Query: 4 VELRGVEKKFPGFKLRV----DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
+ L + +PG + V DL+V DG L+++LGPSGCGKTTT+++ +GL P +G V
Sbjct: 12 LRLEQITVTYPGHREPVLDGLDLDVADGRLLALLGPSGCGKTTTVQVASGLLTPGRGAVH 71
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
G +VT +PP R VFQ L PH NVAF +R R++ LE V
Sbjct: 72 LRGTEVTRVPPEHRGAAVVFQQPMLLPHRTALDNVAFPARMRGRSRRDARTSALAHLERV 131
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
GL R P QLSGGQ QRVALARAL EP VLLLDEP S LD +R ++R + +Q+
Sbjct: 132 GLGALAARYPRQLSGGQAQRVALARALAAEPAVLLLDEPFSALDPSLRHTMRDLLTTVQR 191
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
EL +TT+ VTHDQ EA +++D IA+++ G + Q +P +LY P + VA FLG L
Sbjct: 192 ELAVTTVLVTHDQTEAASVADTIALLDRGGLLQQAQPADLYARPASLAVAHFLGCPTALP 251
Query: 240 LRST--NGVAC-LGELCF--NVGVDGPVKVFFRPESVEIG 274
T AC LGEL V GP + RPE+V++G
Sbjct: 252 GHVTPQGRFACPLGELDLPDTVTHRGPGHLVIRPEAVQLG 291
>pir||G81012 spermidine/putrescine ABC transporter, ATP-binding protein NMB2042
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7227304|gb|AAF42363.1| (AE002554)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 312
Score = 204 bits (514), Expect = 1e-51
Identities = 114/237 (48%), Positives = 155/237 (65%), Gaps = 6/237 (2%)
Query: 4 VELRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+EL G+ K+F G K D L V G+++++LG SGCGK+T L IIAG+ RPD G +
Sbjct: 2 LELNGLCKRF-GNKTVADNICLTVGRGKILAVLGRSGCGKSTLLNIIAGIVRPDGGEIWL 60
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
+G ++T +PP R I +FQDYALFPHM+ +N AFGL+++K+P+ E ER L VG
Sbjct: 61 NGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEAERLAMAALAEVG 120
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESL-RMEIKRIQK 179
L+ +R PE+LSGG++QR+ALARALV+ P +LLLDE S+LD +R +L RM +RI+
Sbjct: 121 LENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRGTLRRMTAERIRN 180
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGN 236
GI + VTH EEA +D IAVM+ GRI Q G P L P VA+ +G N
Sbjct: 181 G-GIPAVLVTHSPEEACTTADEIAVMHKGRILQYGTPETLVKTPSCVQVARLMGLPN 236
>pir||T10888 iron utilization protein C - Haemophilus influenzae
>gi|619400|gb|AAB32112.1| (S72674) HitC=iron utilization
protein [Haemophilus influenzae, type b, DL42, NTHI
TN106, Peptide, 356 aa]
Length = 356
Score = 190 bits (478), Expect = 2e-47
Identities = 103/265 (38%), Positives = 160/265 (59%), Gaps = 9/265 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTF----LPPYSRNI 75
+ ++ GE++ +LG SGCGKTT LR IAG E+P G + R + LP R++
Sbjct: 30 ISFSLQRGEILFLLGASGCGKTTLLRAIAGFEQPSNGEIWLKERLIFGENFNLPTQQRHL 89
Query: 76 GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGG 135
G+V Q+ LFPH+NV++N+A+GL K E + ++ ++++L G+ +R P QLSGG
Sbjct: 90 GYVVQEGILFPHLNVYRNIAYGLGNGKGKNSEEKTRIEQIMQLTGIFELADRFPHQLSGG 149
Query: 136 QQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEA 195
QQQRVALARAL PE++LLDEP S LD +R+ +R E+ + ++ G + ++VTHD++EA
Sbjct: 150 QQQRVALARALAPNPELILLDEPFSALDEHLRQQIRQEMLQALRQSGASAIFVTHDRDEA 209
Query: 196 MAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--KLRSTNGVAC-LGEL 252
+ +D+IA++ G+I Q+ P LY++P AKF+G +L L N C LG +
Sbjct: 210 LRYADKIAIIQQGKILQIDTPRTLYWSPNHLETAKFMGESIVLPANLLDENTAQCQLGNI 269
Query: 253 CF-NVGV-DGPVKVFFRPESVEIGK 275
N + ++ RPE + K
Sbjct: 270 PIKNKSISQNQGRILLRPEQFSLFK 294
>sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HITC
>gi|1075080|pir||E64048 nucleotide-binding protein sfuC
homolog - Haemophilus influenzae (strain Rd KW20)
Length = 356
Score = 189 bits (476), Expect = 3e-47
Identities = 102/265 (38%), Positives = 160/265 (59%), Gaps = 9/265 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTF----LPPYSRNI 75
+ ++ GE++ +LG SGCGKTT LR IAG E+P G + R + LP R++
Sbjct: 30 ISFSLQRGEILFLLGSSGCGKTTLLRAIAGFEQPSNGEIWLKERLIFGENFNLPTQQRHL 89
Query: 76 GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGG 135
G+V Q+ LFPH+NV++N+A+GL K E + ++ ++++L G+ +R P QLSGG
Sbjct: 90 GYVVQEGVLFPHLNVYRNIAYGLGNGKGKNSEEKTRIEQIMQLTGIFELADRFPHQLSGG 149
Query: 136 QQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEA 195
QQQRVALARAL PE++LLDEP S LD +R+ +R E+ + ++ G + ++VTHD++E+
Sbjct: 150 QQQRVALARALAPNPELILLDEPFSALDEHLRQQIRQEMLQALRQSGASAIFVTHDRDES 209
Query: 196 MAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--KLRSTNGVAC-LGEL 252
+ +D+IA++ G+I Q+ P LY++P AKF+G +L L N C LG +
Sbjct: 210 LRYADKIAIIQQGKILQIDTPRTLYWSPNHLETAKFMGESIVLPANLLDENTAQCQLGNI 269
Query: 253 CF-NVGV-DGPVKVFFRPESVEIGK 275
N + ++ RPE + K
Sbjct: 270 PIKNKSISQNQGRILLRPEQFSLFK 294
>gb|AAC21775.1| (U32695) iron(III) ABC transporter, ATP-binding protein (hitC)
[Haemophilus influenzae Rd]
Length = 351
Score = 189 bits (476), Expect = 3e-47
Identities = 102/265 (38%), Positives = 160/265 (59%), Gaps = 9/265 (3%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTF----LPPYSRNI 75
+ ++ GE++ +LG SGCGKTT LR IAG E+P G + R + LP R++
Sbjct: 25 ISFSLQRGEILFLLGSSGCGKTTLLRAIAGFEQPSNGEIWLKERLIFGENFNLPTQQRHL 84
Query: 76 GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGG 135
G+V Q+ LFPH+NV++N+A+GL K E + ++ ++++L G+ +R P QLSGG
Sbjct: 85 GYVVQEGVLFPHLNVYRNIAYGLGNGKGKNSEEKTRIEQIMQLTGIFELADRFPHQLSGG 144
Query: 136 QQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEA 195
QQQRVALARAL PE++LLDEP S LD +R+ +R E+ + ++ G + ++VTHD++E+
Sbjct: 145 QQQRVALARALAPNPELILLDEPFSALDEHLRQQIRQEMLQALRQSGASAIFVTHDRDES 204
Query: 196 MAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLL--KLRSTNGVAC-LGEL 252
+ +D+IA++ G+I Q+ P LY++P AKF+G +L L N C LG +
Sbjct: 205 LRYADKIAIIQQGKILQIDTPRTLYWSPNHLETAKFMGESIVLPANLLDENTAQCQLGNI 264
Query: 253 CF-NVGV-DGPVKVFFRPESVEIGK 275
N + ++ RPE + K
Sbjct: 265 PIKNKSISQNQGRILLRPEQFSLFK 289
>gb|AAD29279.1|AF112365_2 (AF112365) ProVL [Streptomyces coelicolor A3(2)]
Length = 429
Score = 187 bits (471), Expect = 1e-46
Identities = 110/273 (40%), Positives = 157/273 (57%), Gaps = 10/273 (3%)
Query: 4 VELRGVEKKFPGFKL----RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
+EL + K++PG V +E+K GE + +GPSGCGK+TTL++I L P G +
Sbjct: 27 IELEALTKRYPGSPQPAVENVSMEIKAGETVIFVGPSGCGKSTTLKMITRLIEPSGGRIR 86
Query: 60 FDGRDVTFLPPYS--RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+G DVT + P R +G+ Q LFPHMN +N+A + + I +V E+L+
Sbjct: 87 INGEDVTDIDPVKLRRKVGYAIQSSGLFPHMNRRQNIALVPRMIGWSKARIRERVEEMLD 146
Query: 118 LVGLKG--FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LVGL F R P QLSGGQQQRV +ARAL +P VLL+DEP +D R+ L+ E+
Sbjct: 147 LVGLDAGEFHGRYPRQLSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRDHLQDELI 206
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVM-NFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
R+Q EL T ++VTHD +EA+ + DRIAV+ I Q P + NP +FV+ F+G
Sbjct: 207 RLQHELHKTIVFVTHDFDEAIKLGDRIAVLRERSHIAQFDTPEAILTNPADDFVSGFVGA 266
Query: 235 GNLLKLRSTNGVACLGELCF-NVGVDGPVKVFF 266
G LK + V +G + V V+ P++ F
Sbjct: 267 GAALKRLNLTRVRDVGITDYPTVTVEDPLQDIF 299
>pir||T36641 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5019356|emb|CAB44409.1| (AL078610)
putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 374
Score = 187 bits (471), Expect = 1e-46
Identities = 103/270 (38%), Positives = 150/270 (55%), Gaps = 14/270 (5%)
Query: 15 GFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRN 74
GF+L V L G+++++LGP+G GKTT LR +AGL G++ DG ++ PP SR
Sbjct: 42 GFRLDVALTAAPGDVVALLGPNGAGKTTALRALAGLVPLSDGHLRLDGAELDRTPPESRP 101
Query: 75 IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSG 134
+G VFQDY LFPH+ NVAFG R + + + LE +GL G P +LSG
Sbjct: 102 VGVVFQDYLLFPHLTALDNVAFGPRCRGATKAQARTQAAAWLERLGLAGHAAAKPRRLSG 161
Query: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
GQ QRVALARAL P +LLLDEPL+ LDA+ R +R +++R + + VTHD +
Sbjct: 162 GQAQRVALARALATRPRLLLLDEPLAALDARTRLDVRAQLRRHLADFEAVAVLVTHDPLD 221
Query: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG--------TGNLLKLRSTNGV 246
AM ++D + V+ G + Q G P + P+T+++A +G G+ ++L +
Sbjct: 222 AMVLADHLVVVEDGHVVQEGTPSHIARRPRTDYIAHLVGLNLYRGRAEGHTVRLEGGPAI 281
Query: 247 ACLGELCFNVGVDGPVKVFFRPESVEIGKE 276
EL GP V F P +V + +E
Sbjct: 282 TTTEEL------TGPAFVAFPPSAVTLHRE 305
>pir||T36154 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531380|emb|CAB51012.1|
(AL096852) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 424
Score = 187 bits (471), Expect = 1e-46
Identities = 110/273 (40%), Positives = 157/273 (57%), Gaps = 10/273 (3%)
Query: 4 VELRGVEKKFPGFKL----RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
+EL + K++PG V +E+K GE + +GPSGCGK+TTL++I L P G +
Sbjct: 22 IELEALTKRYPGSPQPAVENVSMEIKAGETVIFVGPSGCGKSTTLKMINRLIEPSGGRIR 81
Query: 60 FDGRDVTFLPPYS--RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+G DVT + P R +G+ Q LFPHM V +N+A + + I +V E+L+
Sbjct: 82 INGEDVTDIDPVKLRRKVGYAIQSSGLFPHMTVAQNIALVPRMIGWSKARIRERVEEMLD 141
Query: 118 LVGLKG--FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LVGL F R P QLSGGQQQRV +ARAL +P VLL+DEP +D R+ L+ E+
Sbjct: 142 LVGLDAGEFHGRYPRQLSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRDHLQDELI 201
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVM-NFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
R+Q EL T ++VTHD +EA+ + DRIAV+ I Q P + NP +FV+ F+G
Sbjct: 202 RLQHELHKTIVFVTHDFDEAIKLGDRIAVLRERSHIAQFDTPEAILTNPADDFVSGFVGA 261
Query: 235 GNLLKLRSTNGVACLGELCF-NVGVDGPVKVFF 266
G LK + V +G + V V+ P++ F
Sbjct: 262 GAALKRLNLTRVRDVGITDYPTVTVEDPLQDIF 294
>pir||C69223 anion permease - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2622017|gb|AAB85418.1| (AE000867) anion
permease [Methanobacterium thermoautotrophicum]
Length = 357
Score = 185 bits (466), Expect = 5e-46
Identities = 103/281 (36%), Positives = 163/281 (57%), Gaps = 9/281 (3%)
Query: 4 VELRGVEKKFPGFKLRVD-LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDG 62
+++ +E F +RVD L + G+ + I+GP+G GK+ L I G P G + DG
Sbjct: 4 LDIDNLEIDLGEFVVRVDELHLSRGDYLVIIGPTGSGKSIFLETIMGFFEPISGTISLDG 63
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLK 122
D+T LPP R++ V+QD+ LFPHM V +N+A+GL + ++ I R+V E+ ++G+
Sbjct: 64 ADLTTLPPEERDVSIVYQDHCLFPHMTVEENIAYGLRKQTEMKENIHRQVHEIAAMMGID 123
Query: 123 GFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELG 182
NR P LSGG+ QR ++ARA+++ P +LL+DEP S LD + + SLR I I+
Sbjct: 124 HVLNRYPGTLSGGELQRASIARAIIVNPRLLLMDEPFSALDQRTKISLRKLIADIRDNFE 183
Query: 183 ITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRS 242
T ++VTHD ++ +S+++AVMN G+I Q+G+ E+ P FVA FLG N+L+
Sbjct: 184 TTVIHVTHDLDDIWWLSNKVAVMNHGKIIQMGKKEEVINKPSPYFVADFLG-ANILEGTV 242
Query: 243 TNGVACLGELCFNVGV-------DGPVKVFFRPESVEIGKE 276
V L + N + +G V + RPE++ I +
Sbjct: 243 KGQVNGLTSVNVNSNIFRTVDCGEGSVILSIRPENIMIAAD 283
>pir||T43920 YfuC protein [imported] - Yersinia enterocolitica
>gi|619575|emb|CAA87396.1| (Z47200) YfuC protein
[Yersinia enterocolitica]
Length = 349
Score = 185 bits (464), Expect = 8e-46
Identities = 109/262 (41%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDV----TFLPPYSRNI 75
+DL+V G +I+GPSG GKTT LRIIAG E PD G V+ G + T +P + R I
Sbjct: 22 IDLQVTAGSRTAIVGPSGSGKTTLLRIIAGFETPDSGKVILQGNPLFDQSTHVPAHKRGI 81
Query: 76 GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL-KGFENRMPEQLSG 134
GFV QD ALFPH N+A+GL+ K ++ R++ +++E+V L + P ++SG
Sbjct: 82 GFVPQDGALFPHFTAAGNIAYGLKGSK---QDKARRIDKLMEMVALDRRLAQLWPHEISG 138
Query: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
GQQQRVALARAL P ++LL EP S LD +R S R + + + I ++ VTHDQ E
Sbjct: 139 GQQQRVALARALGQRPALMLLVEPFSTLDTALRASTRKAVAELLSQANIASILVTHDQSE 198
Query: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNG--VACLGEL 252
A++ +D++AVM G++ VG P ELY P E A FLG +L G LG +
Sbjct: 199 ALSFADQVAVMRAGKLVHVGAPQELYLRPIDEPTATFLGETLILSPNIEPGWPDCALGRV 258
Query: 253 CFNVGV-DGPVKVFFRPESVEI 273
+ G ++ RPE V I
Sbjct: 259 KVDDATRQGQTRIMLRPEQVTI 280
>gb|AAF40473.1|AF184955_1 (AF184955) OpuAA [Lactococcus lactis]
Length = 407
Score = 181 bits (454), Expect = 1e-44
Identities = 93/259 (35%), Positives = 153/259 (58%), Gaps = 7/259 (2%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT------FLPPYSRN 74
+ E+ +GE+ I+G SG GK+T LR++ L P G + D +DV L ++
Sbjct: 48 NFEINEGEIFVIMGLSGSGKSTLLRLLNRLIEPTSGKIFIDDQDVATLNKEDLLQVRRKS 107
Query: 75 IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSG 134
+ VFQ++ LFPH + +N +GLEV+ +P++E ++ + L+ L F+++ P+QLSG
Sbjct: 108 MSMVFQNFGLFPHRTILENTEYGLEVQNVPKEERRKRAEKALDNANLLDFKDQYPKQLSG 167
Query: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
G QQRV LARAL +PE+LL+DE S LD +R ++ E+ +Q + T ++V+HD E
Sbjct: 168 GMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLELQAKFQKTIIFVSHDLNE 227
Query: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCF 254
A+ I DRIA+M G+I Q+G E+ NP ++V F+ +L K+ + + + L
Sbjct: 228 ALRIGDRIAIMKDGKIMQIGTGEEILTNPANDYVKTFVEDVDLAKVITAENI-MIPALTT 286
Query: 255 NVGVDGPVKVFFRPESVEI 273
N+ VDGP + ++ E+
Sbjct: 287 NIDVDGPSVALKKMQTEEV 305
>pir||F64204 spermidine/putrescine transport ATP-binding protein potA homolog -
Mycoplasma genitalium
Length = 486
Score = 178 bits (448), Expect = 6e-44
Identities = 91/184 (49%), Positives = 131/184 (70%), Gaps = 8/184 (4%)
Query: 101 RKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLS 160
RKL + E +KV +V+E+VGLKG E+R+P++LSGG +QRVALAR+LV+EPE+LLLDEPLS
Sbjct: 244 RKLTKAEQNKKVSDVIEMVGLKGKEDRLPDELSGGMKQRVALARSLVVEPEILLLDEPLS 303
Query: 161 NLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELY 220
LDAKVR++L+ E+++I K+ G+T + VTHDQEEA+ +SDRI VMN G I QVG P+++Y
Sbjct: 304 ALDAKVRKNLQKELQQIHKKSGLTFILVTHDQEEALVLSDRIVVMNEGNILQVGNPVDIY 363
Query: 221 YNPKTEFVAKFLGTGNLL--------KLRSTNGVACLGELCFNVGVDGPVKVFFRPESVE 272
+PKTE++A F+G N+ K++ +G ++ N V K+ RPE +
Sbjct: 364 DSPKTEWIANFIGQANIFKGTYLGEKKIQLQSGEIIQTDVDNNYVVGKQYKILIRPEDFD 423
Query: 273 IGKE 276
+ E
Sbjct: 424 LVPE 427
>sp|P47288|POTA_MYCGE SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA HOMOLOG
>gi|3844651|gb|AAC71258.1| (U39684)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Mycoplasma genitalium]
Length = 559
Score = 178 bits (448), Expect = 6e-44
Identities = 91/184 (49%), Positives = 131/184 (70%), Gaps = 8/184 (4%)
Query: 101 RKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLS 160
RKL + E +KV +V+E+VGLKG E+R+P++LSGG +QRVALAR+LV+EPE+LLLDEPLS
Sbjct: 317 RKLTKAEQNKKVSDVIEMVGLKGKEDRLPDELSGGMKQRVALARSLVVEPEILLLDEPLS 376
Query: 161 NLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELY 220
LDAKVR++L+ E+++I K+ G+T + VTHDQEEA+ +SDRI VMN G I QVG P+++Y
Sbjct: 377 ALDAKVRKNLQKELQQIHKKSGLTFILVTHDQEEALVLSDRIVVMNEGNILQVGNPVDIY 436
Query: 221 YNPKTEFVAKFLGTGNLL--------KLRSTNGVACLGELCFNVGVDGPVKVFFRPESVE 272
+PKTE++A F+G N+ K++ +G ++ N V K+ RPE +
Sbjct: 437 DSPKTEWIANFIGQANIFKGTYLGEKKIQLQSGEIIQTDVDNNYVVGKQYKILIRPEDFD 496
Query: 273 IGKE 276
+ E
Sbjct: 497 LVPE 500
Score = 105 bits (259), Expect = 9e-22
Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 29/255 (11%)
Query: 4 VELRGVEKKFPGFKLRV---DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+E+ G+ K F + + L +K GE I+ILGPSGCGKTT LR++AG E P G +
Sbjct: 7 IEIEGLNKTFDDGYVSIRDISLNIKKGEFITILGPSGCGKTTLLRLLAGFEDPTYGKIKV 66
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
+G D+ + + R VFQDYALF H+ V+KN+A+GL+V EI + V + + +
Sbjct: 67 NGIDIKDMAIHKRPFATVFQDYALFSHLTVYKNIAYGLKVMWTKLDEIPKLVSDYQKQLA 126
Query: 121 LKGFE-NRMPEQL--SGGQQQRV-----ALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
LK + R EQL + QR+ L + L I + ++ N + RE +
Sbjct: 127 LKHLKLERKIEQLQKNNSNAQRIKKLKEKLQKLLEINKQKVI---EFENKEKLRREDIYK 183
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRP-----------LELYY 221
++++ KE + + + E+ D+ +F ++E + L+ Y
Sbjct: 184 NLEQLTKEWDLLSQKKLKEVEQQKQAIDK----SFEKVENKYKKDPWFFQHSEIRLKQYQ 239
Query: 222 NPKTEFVAKFLGTGN 236
KTE A T N
Sbjct: 240 KKKTELKADIKATKN 254
>gb|AAF04258.1|AF139575_1 (AF139575) BusAA [Lactococcus lactis]
Length = 407
Score = 178 bits (448), Expect = 6e-44
Identities = 102/291 (35%), Positives = 164/291 (56%), Gaps = 16/291 (5%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT------FLPPYSRN 74
+ E+ +GE+ I+G SG GK+T LR++ L P G + D +DV L ++
Sbjct: 48 NFEINEGEIFVIMGLSGSGKSTLLRLLNRLIEPTSGKIFIDDQDVATLNKEDLLQVRRKS 107
Query: 75 IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSG 134
+ VFQ++ LFPH + +N +GLEV+ +P++E ++ + L+ L F+++ P+QLSG
Sbjct: 108 MSMVFQNFGLFPHRTILENTEYGLEVQNVPKEERRKRAEKALDNANLLDFKDQYPKQLSG 167
Query: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
G QQRV LARAL +PE+LL+DE S LD +R ++ E+ +Q + T ++V+HD E
Sbjct: 168 GMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLELQAKFQKTIIFVSHDLNE 227
Query: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCF 254
A+ I DRIA+M G+I Q+G E+ NP ++V F+ + K+ + + + L
Sbjct: 228 ALRIGDRIAIMKDGKIMQIGTGEEILTNPANDYVKTFVEDVDRAKVITAENI-MIPALTT 286
Query: 255 NVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQGKEIIA 305
N+ VDGP SV + K E EV + + +FR V ++ IA
Sbjct: 287 NIDVDGP--------SVALKKMKTE-EVSSLMAVDRKRQFRGVVTSEQAIA 328
>gb|AAF37878.1|AF234619_1 (AF234619) OpuAA [Lactococcus lactis]
Length = 408
Score = 178 bits (448), Expect = 6e-44
Identities = 102/291 (35%), Positives = 163/291 (55%), Gaps = 16/291 (5%)
Query: 21 DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVT------FLPPYSRN 74
+ E+ +GE+ I+G SG GK+T LR++ L P G + D +DV L +
Sbjct: 48 NFEINEGEIFVIMGLSGSGKSTLLRLLNRLIEPTSGKIFIDNQDVATLNKEDLLQVRRKT 107
Query: 75 IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSG 134
+ VFQ++ LFPH + +N +GLEV+ +P++E ++ + L+ L F+++ P+QLSG
Sbjct: 108 MSMVFQNFGLFPHRTILENTEYGLEVQNVPKEERRKRAEKALDNANLLDFKDQYPKQLSG 167
Query: 135 GQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEE 194
G QQRV LARAL +PE+LL+DE S LD +R ++ E+ +Q + T ++V+HD E
Sbjct: 168 GMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLELQAKFQKTIIFVSHDLNE 227
Query: 195 AMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCF 254
A+ I DRIA+M G+I Q+G E+ NP ++V F+ + K+ + + + L
Sbjct: 228 ALRIGDRIAIMKDGKIMQIGTGEEILTNPANDYVKTFVEDVDRAKVITAENI-MIPALTT 286
Query: 255 NVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSVQGKEIIA 305
N+ VDGP SV + K E EV + + +FR V ++ IA
Sbjct: 287 NIDVDGP--------SVALKKMKTE-EVSSLMAVDKKRQFRGVVTSEQAIA 328
>sp|P75059|POTA_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA HOMOLOG
>gi|2146654|pir||S73425 spermidine/putrescine transport
ATP-binding protein potA - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|1673754|gb|AAB95747.1| (AE000011)
spermidine/putrescine transport ATP-binding prot
[Mycoplasma pneumoniae]
Length = 560
Score = 175 bits (440), Expect = 5e-43
Identities = 91/181 (50%), Positives = 130/181 (71%), Gaps = 8/181 (4%)
Query: 101 RKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLS 160
RKL ++E +KV V+ELVGLKG E+++PE+LSGG +QRVALAR+LVIEP++LLLDEPLS
Sbjct: 318 RKLTKQEQHQKVCAVIELVGLKGNEDKLPEELSGGMKQRVALARSLVIEPDILLLDEPLS 377
Query: 161 NLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELY 220
LDAKVR++L+ E+++I ++ G+T + VTHDQEEA+ +S+RI VMN G I QVG P ++Y
Sbjct: 378 ALDAKVRKNLQKELQKIHQQSGLTFILVTHDQEEALVLSNRIVVMNEGNILQVGSPADIY 437
Query: 221 YNPKTEFVAKFLGTGNL--------LKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVE 272
+PKTE++A F+G N+ LK++ +G ++ N V K+ RPE +
Sbjct: 438 DSPKTEWIANFIGQANIFKGTYLGDLKIKLHSGEVIKTDVDNNYVVGKEYKILIRPEDFD 497
Query: 273 I 273
I
Sbjct: 498 I 498
Score = 104 bits (256), Expect = 2e-21
Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 4 VELRGVEKKFP-GF-KLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+E+ G+ K F GF +R ++L++K GE I+ILGPSGCGKTTTLR++AG E P G +
Sbjct: 7 IEIEGLNKTFDDGFVSVRDINLKIKKGEFITILGPSGCGKTTTLRLLAGFEDPTYGKIKV 66
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVRE 114
+G D+ LP + R VFQDYALF H+ V+KN+A+GL+ I++ V +
Sbjct: 67 NGLDIKDLPIHKRPFATVFQDYALFSHLTVYKNIAYGLKAMYTKLDPIDKLVEQ 120
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 174 bits (436), Expect = 2e-42
Identities = 110/302 (36%), Positives = 178/302 (58%), Gaps = 25/302 (8%)
Query: 4 VELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+EL G+ K + K+ V+L+V++GE + I+GP+G GK+T LRI+ LERPD G +LF
Sbjct: 5 IELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEILFM 64
Query: 62 GRDVTFLPPYS--RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
G +V L P R +G VFQ+ +F V +++ +G +R + E +V++VLE +
Sbjct: 65 GENVDDLKPLEVRRRMGMVFQNTPVF-RGTVAESILYGPRIRG--ERPHESEVKDVLETM 121
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
GLKG+ +R +LSGG++QR+ALA+ L+ PEV+LLDE S+LD R RME +
Sbjct: 122 GLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRS--RME--DVIA 177
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
EL +T ++ THD + ++DRIA++N I Q G P E++ P + FVA+F+G N+L+
Sbjct: 178 ELDVTVIFTTHDLLQGQKLADRIAILN-RSILQTGEPREIFKKPASRFVAEFVGARNMLR 236
Query: 240 LR---STNGVACLGELCFNVGV------DGPVKVFFRPESVEIGKEGVEAEVMDYEILPG 290
R + G++ + C + + G V RPE + + + ++ ++ L G
Sbjct: 237 GRAHITAEGISLIE--CDGISIYSSERATGDVSATIRPEDITVSWQRTDSSALNQ--LEG 292
Query: 291 RI 292
R+
Sbjct: 293 RV 294
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 166 bits (415), Expect = 4e-40
Identities = 93/239 (38%), Positives = 147/239 (60%), Gaps = 8/239 (3%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++E+ + K+F ++ V ++V+ GE++ I+GPSG GK+T LR I LE P G +
Sbjct: 1 MAQLEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKI 60
Query: 59 LFDGRDVTF----LPPYSRNIGFVFQDYALFPHMNVFKNVAFG-LEVRKLPRKEIERKVR 113
L DG D+T + + IG VFQ + LFPH+ +NV ++++K+ ++E E
Sbjct: 61 LLDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGM 120
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
+LE VGL+ + P QLSGGQQQRVA+ARAL + PEV+L DE S LD ++ + +
Sbjct: 121 RLLEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLDV 180
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+K++ ++ G+T + VTH+ A + DR+ M+ G I + G+P +++ NPK E KFL
Sbjct: 181 MKQLARD-GMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSNPKHERTRKFL 238
>gi|11498246 nitrate ABC transporter, ATP-binding protein (nrtC-2)
[Archaeoglobus fulgidus] >gi|7445947|pir||F69329 nitrate
ABC transporter, ATP-binding protein (nrtC-2) homolog -
Archaeoglobus fulgidus >gi|2649976|gb|AAB90598.1|
(AE001060) nitrate ABC transporter, ATP-binding protein
(nrtC-2) [Archaeoglobus fulgidus]
Length = 235
Score = 163 bits (408), Expect = 3e-39
Identities = 87/207 (42%), Positives = 132/207 (63%), Gaps = 16/207 (7%)
Query: 2 VRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V + + G++K + ++ V V+ GE + ++G SGCGKTT L+IIAGLE+PD G V
Sbjct: 5 VALIVEGLKKSYGNLRVLDGVTFSVEKGEFVCLIGESGCGKTTILKIIAGLEKPDGGRVE 64
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
F G +GFVFQD L P V+ N+ F L + + VRE+++ V
Sbjct: 65 FAG---------GARMGFVFQDDRLLPWKTVYGNILFALRASGIEDGGV---VREIIDAV 112
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
GL+GFEN P+QLSGG +QRV +ARAL + P++LL+DEP ++LDA+ RE ++ E+ RI +
Sbjct: 113 GLRGFENYYPKQLSGGMRQRVGIARALAVNPDLLLMDEPFASLDARTRERMQEELLRIVE 172
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMN 206
G T ++VTH +EA+ ++DR+ V++
Sbjct: 173 --GKTVVFVTHSIDEAVYLADRVVVLS 197
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 161 bits (403), Expect = 1e-38
Identities = 97/249 (38%), Positives = 148/249 (58%), Gaps = 18/249 (7%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +E++ + KKF G + +DLEVK GE+++I+GPSG GKTT LR I LE+P+ G +
Sbjct: 1 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI 60
Query: 59 LFD----------GRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFG-LEVRKLPRKE 107
+ + + +++GFVFQ++ LFPH V +N+ G + V+ P++E
Sbjct: 61 TVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEE 120
Query: 108 IERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVR 167
+ RE+L VGL G E P +LSGGQQQRVA+ARAL + PEV+L DEP S LD ++
Sbjct: 121 ATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELV 180
Query: 168 ESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPK--- 224
+ I+++ +E T + VTH+ A ++DR M+ GRI + G L+ +P+
Sbjct: 181 GEVLNTIRQLAQEKR-TMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPEQPR 239
Query: 225 -TEFVAKFL 232
+F+ KFL
Sbjct: 240 TRQFLEKFL 248
>sp|P95155|MODC_MYCTU MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MODC
>gi|7430359|pir||C70666 probable membrane-bound ABC
transporter modC - Mycobacterium tuberculosis (strain
H37RV) >gi|1781188|emb|CAB06128.1| (Z83859) modC
[Mycobacterium tuberculosis]
Length = 369
Score = 158 bits (396), Expect = 7e-38
Identities = 91/243 (37%), Positives = 134/243 (54%), Gaps = 13/243 (5%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
M +++LR V +L V+ V GE++++LGP+G GK+T L +IAGL RPD G V
Sbjct: 1 MSKLQLRAV---VADRRLDVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRL 57
Query: 61 DGRDVTF------LPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRK----LPRKEIER 110
R +T + + R +G + QD LFPH++V KNVAFG + R+ R
Sbjct: 58 GDRVLTDTEAGVNVATHDRRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRA 117
Query: 111 KVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESL 170
L V + F +R P QLSGGQ QRVA+ARAL EP+VLLLDEPL+ LD +
Sbjct: 118 SALRWLREVNAEQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGI 177
Query: 171 RMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAK 230
R ++ + G + THD + ++DR+ V+ G I ++G ++ P++ F A+
Sbjct: 178 RSVLRSVVARSGCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGAR 237
Query: 231 FLG 233
G
Sbjct: 238 IAG 240
>pir||T44856 molybdenum transport ATPase (EC 3.6.1.-) [imported] - Arthrobacter
nicotinovorans plasmid pAO1 >gi|2288881|emb|CAA71778.1|
(Y10817) ATPase [Arthrobacter nicotinovorans]
Length = 349
Score = 158 bits (396), Expect = 7e-38
Identities = 99/260 (38%), Positives = 140/260 (53%), Gaps = 21/260 (8%)
Query: 28 ELISILGPSGCGKTTTLRIIAGLERPDKGNVLF--------DGRDVTFLPPYSRNIGFVF 79
E +++LGP+G GK+T L I+AGL RPD GN + DG FLPP++R +
Sbjct: 24 ETVAVLGPNGAGKSTLLGILAGLIRPDSGNAMLGRKRCFKLDGGTNNFLPPHTRGTALLA 83
Query: 80 QDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQR 139
Q+ LFPHM+V +NVAFG R + + R L V GF +R P QLSGGQ QR
Sbjct: 84 QEPLLFPHMSVLENVAFGPRAAGANRSKALQTGRHWLTEVEAAGFADRRPGQLSGGQAQR 143
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
VA+ARAL +PE+LLLDEP++ LD LR +KR+ + +THD +A+ ++
Sbjct: 144 VAIARALATDPELLLLDEPMAALDIHAAPMLRRLLKRVLSNR--RAIIITHDVLDALVLA 201
Query: 200 DRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVD 259
DR V+ GRI + G + P+++F A G NLL T + + D
Sbjct: 202 DRAVVLEGGRITEEGPTRRVLEKPRSKFAAGLAGM-NLLPGTITG---------YGLTSD 251
Query: 260 GPVKVFFRPESVEI-GKEGV 278
G + + PE + G+ GV
Sbjct: 252 GGLDITAHPEDGAVPGQNGV 271
>pir||H83207 probable ATP-binding component of ABC transporter PA3514 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949661|gb|AAG06902.1|AE004771_11 (AE004771)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 283
Score = 151 bits (377), Expect = 1e-35
Identities = 92/233 (39%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 2 VRVELRGVEKKFPGFKLR--------VDLEVKDGELISILGPSGCGKTTTLRIIAGLERP 53
+ +E RGV K FPG +DL ++ GE++SI+GPSGCGK+T L + AGL P
Sbjct: 25 LEIEFRGVAKHFPGRGKSAATLAVQGLDLAIRRGEVVSIIGPSGCGKSTLLNMGAGLYAP 84
Query: 54 DKGNVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVR 113
+G V G V+ R + F+ Q L P ++ +N+ GLE+ E
Sbjct: 85 SEGEVRVGGERVS---GPVRKVSFMLQKDLLMPWRSIRRNIELGLEIDGRAAGERRAIAE 141
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
E+LE L GF P QLSGG +QR ALAR L +P+VL LDEP S LDA+ + L+ +
Sbjct: 142 EMLEKCHLAGFAEHYPFQLSGGMRQRAALARTLATDPQVLFLDEPFSALDAQTKMILQQD 201
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGR---IEQVGRPLELYYNP 223
+ R+ E T +++THD EA+A+SDRI VM+ +E++ L L NP
Sbjct: 202 LARMLCEQRKTALFITHDLVEAIAMSDRILVMSARPGTIVEEIEVGLPLRDNP 254
>dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 264
Score = 150 bits (376), Expect = 2e-35
Identities = 85/213 (39%), Positives = 131/213 (60%), Gaps = 12/213 (5%)
Query: 1 MVRVELRGVEKKFPGFKLR--------VDLEVKDGELISILGPSGCGKTTTLRIIAGLER 52
M V ++ V K F G + + ++LE+ GE +S+LGPSGCGK+T L I+AGLE+
Sbjct: 1 MASVMIKDVGKTFEGKEEQSSYQVFENINLEIHSGEFVSLLGPSGCGKSTLLNIVAGLEK 60
Query: 53 PDKGNVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
G V + G++ P R G VFQ+ AL P + V NV F + ++ ++E +++
Sbjct: 61 ASNGAV-YVGQNKVIEPGPDR--GVVFQEAALMPWLTVLDNVVFAIR-KQYNKEEAKKRA 116
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
E L+LV L F + P +LSGG +QRVA+ARAL ++P+VLL+DEP LD + R L
Sbjct: 117 LEYLKLVHLSKFTHSYPHELSGGMKQRVAIARALALDPDVLLMDEPFGALDEQTRSMLHR 176
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVM 205
E++ I ++ T ++VTH+ EA+ +SD+I +M
Sbjct: 177 ELQAIWQQTKKTIIFVTHNIREAILLSDKIFLM 209
>pir||H81448 probable molybdenum transport ATP-binding protein Cj0300c
[imported] - Campylobacter jejuni (strain NCTC 11168)
>gi|6967774|emb|CAB72767.1| (AL139074) putative
molybdenum transport ATP-binding protein [Campylobacter
jejuni]
Length = 294
Score = 150 bits (375), Expect = 2e-35
Identities = 91/220 (41%), Positives = 130/220 (58%), Gaps = 21/220 (9%)
Query: 1 MVRVELRGVEKKFPGFKLRVDL----EVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M+R+++ G R+DL +++ G++ ++ G SG GKTT L+IIAGL +P G
Sbjct: 1 MIRIDINHPMNTAKG---RLDLNFKKDIESGKITALFGESGAGKTTLLKIIAGLIKPKLG 57
Query: 57 NV------LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIER 110
+ FD L R IGFVFQDYALFP+MN+ +N+A+ +
Sbjct: 58 RIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIAYAASSKA-------- 109
Query: 111 KVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESL 170
KV E+L L+ L+ P+ LSGGQ QRVALARAL EP++LLLDEPLS LD K+R +L
Sbjct: 110 KVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSALDFKMRANL 169
Query: 171 RMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
+ E+ +I + I+T+ V+HD E +S RI + G+I
Sbjct: 170 QDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKI 209
>sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187 HOMOLOG
(E07_ORF586) >gi|2146652|pir||S73346
sn-glycerol-3-phosphate transport system permease ugpC -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673667|gb|AAB95668.1| (AE000003)
sn-glycerol-3-phosphate transport system permease
protein [Mycoplasma pneumoniae]
Length = 586
Score = 148 bits (370), Expect = 8e-35
Identities = 81/177 (45%), Positives = 112/177 (62%), Gaps = 12/177 (6%)
Query: 108 IERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVR 167
I R +EV E + + ++ P +SGGQQQRVA+ARA+V P+VLL+DEPLSNLDAK+R
Sbjct: 340 INRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMDEPLSNLDAKLR 399
Query: 168 ESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEF 227
R I++ Q++L ITT++VTHDQEEAM+ISD I M+ G+++Q+G P ELY P EF
Sbjct: 400 VQTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSPSELYLKPANEF 459
Query: 228 VAKFLGTGNLLKLRSTNGVACLGELCFNVG---------VDGPVKVFFRPESVEIGK 275
VA FLG+ ++ N G+L +N DG ++V FR + V K
Sbjct: 460 VATFLGSP---EMNIVNATVKAGQLLWNENPLVKTKFDLPDGAIRVGFRYDEVTAPK 513
Score = 104 bits (256), Expect = 2e-21
Identities = 47/79 (59%), Positives = 61/79 (76%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVF 79
++L VK EL+++LGPSGCGKTT+L +IAGL P G VLF+G DVT PP R +G VF
Sbjct: 31 INLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFNGYDVTKKPPQQRKLGLVF 90
Query: 80 QDYALFPHMNVFKNVAFGL 98
Q+YAL+PHM+VF+N+ F L
Sbjct: 91 QNYALYPHMSVFENIVFPL 109
>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
>gi|1075335|pir||G64181 ABC-type transport protein
HI1078 - Haemophilus influenzae
>gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 257
Score = 147 bits (367), Expect = 2e-34
Identities = 92/245 (37%), Positives = 140/245 (56%), Gaps = 14/245 (5%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +++ ++K F G + +D E+ GE+++ILGPSG GKTT LR + LERP++G +
Sbjct: 1 MSMLKVSNIQKNFNGNHVLKGIDFEINKGEVVAILGPSGSGKTTFLRCLNLLERPEQGIL 60
Query: 59 LF-DGR-DVTFLPPYS--------RNIGFVFQDYALFPHMNVFKNVAFGLEV-RKLPRKE 107
F DG + F S R VFQ Y LFPH + +NV G+ V +K + +
Sbjct: 61 EFTDGSLKIDFSQKISKADELKLRRRSSMVFQQYNLFPHRSALENVMEGMVVVQKQDKAQ 120
Query: 108 IERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVR 167
K +LE VGLK + P QLSGGQQQRV +ARAL ++P+++LLDEP S LD ++
Sbjct: 121 AREKALSLLEKVGLKNKADLFPSQLSGGQQQRVGIARALAVKPDIILLDEPTSALDPELV 180
Query: 168 ESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEF 227
+ +K + +E G T + VTH+ + A ++DR+ +M G I + + + P+ E
Sbjct: 181 GEVLQTLKMLAQE-GWTMIIVTHEMQFAKDVADRVILMADGHIVEQNTADKFFTCPQHER 239
Query: 228 VAKFL 232
+FL
Sbjct: 240 TKQFL 244
>sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING PROTEIN AAPP
>gi|1154897|emb|CAA57936.1| (X82596) general amino acid
ABC type transporter [Rhizobium leguminosarum]
Length = 257
Score = 146 bits (366), Expect = 2e-34
Identities = 86/238 (36%), Positives = 137/238 (57%), Gaps = 8/238 (3%)
Query: 2 VRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V VE+ + K + F + ++L+V GE I I GPSG GK+T +R I LE KG ++
Sbjct: 16 VAVEIVNMNKWYGDFHVLRDINLKVMRGERIVIAGPSGSGKSTMIRCINRLEEHQKGKIV 75
Query: 60 FDGRDVTF----LPPYSRNIGFVFQDYALFPHMNVFKNVAFG-LEVRKLPRKEIERKVRE 114
DG ++T + R +G VFQ + LFPH+ + +N + VRK+P+K+ E
Sbjct: 76 VDGTELTNDLKKIDEVRREVGMVFQHFNLFPHLTILENCTLAPIWVRKMPKKQAEEVAMH 135
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
L+ V + N+ P QLSGGQQQRVA+AR+L + P+++L DEP S LD ++ + + +
Sbjct: 136 FLKRVKIPEQANKYPGQLSGGQQQRVAIARSLCMNPKIMLFDEPTSALDPEMIKEVLDTM 195
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+ +E G+T + VTH+ A +++R+ M+ G+I + P + NP+ E FL
Sbjct: 196 VGLAEE-GMTMLCVTHEMGFARQVANRVIFMDQGQIVEQNEPAAFFDNPQHERTKLFL 252
>pir||S75100 ABC transport protein - Synechocystis sp. (strain PCC 6803)
>gi|1653045|dbj|BAA17962.1| (D90910) ABC transporter
[Synechocystis sp.]
Length = 218
Score = 146 bits (364), Expect = 4e-34
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 10/222 (4%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M+RVE V K + + ++ L + G +ILG SG GKTT LR+IAGL+R D G +
Sbjct: 1 MIRVEQ--VSKTYGSVAVLRQLCLTIPPGGKTAILGRSGSGKTTLLRLIAGLDRLDGGEI 58
Query: 59 LFDGRDVT----FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVRE 114
R V+ +LPP+ R IGFVFQ AL+PH+ V +N+AFGL L + E + ++
Sbjct: 59 YLGDRQVSCPQHYLPPHQRGIGFVFQSPALWPHLTVQQNIAFGLA--HLSKTEQQERIEP 116
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
+L + + +R P QLSGG+ +RVA AR L P LLLDEPLSNLD ++E L +
Sbjct: 117 LLARLAIAPLIDRYPHQLSGGEAKRVAFARTLAPRPPFLLLDEPLSNLDQGLKEELLTYL 176
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRP 216
+ T+YVTHD EA ++ I ++ G++ P
Sbjct: 177 QDYLDFTQACTLYVTHDLAEAQFLTSDIQLLRDGQLVPHSNP 218
>pir||G83214 probable ATP-binding component of ABC transporter PA3442 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949583|gb|AAG06830.1|AE004765_3 (AE004765) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 274
Score = 146 bits (364), Expect = 4e-34
Identities = 89/220 (40%), Positives = 128/220 (57%), Gaps = 12/220 (5%)
Query: 2 VRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
+ + LRGV ++F ++ +DL V G+ ++I+G SGCGK+T LR++AGL++P +G +L
Sbjct: 19 IPLALRGVARRFGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSRGELL 78
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
L + +FQD L P V NV GL R + K + L V
Sbjct: 79 AGS---AALAEAREDTRLMFQDSRLLPWKRVIDNVGLGL------RGDWRAKALQALRAV 129
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
GL N P LSGGQ+QRVALARAL+ EP +LLLDEPL LDA R ++ I+ + +
Sbjct: 130 GLAERANEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQQLIEGLWR 189
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
E G T + VTHD EA+A++DR+ ++ G I + P+EL
Sbjct: 190 EHGFTVLLVTHDVSEAVAVADRVILIEDGEI-GLDLPVEL 228
>emb|CAA71848.1| (Y10908) sulfate transport ATP-binding protein [Bacillus cereus]
Length = 233
Score = 145 bits (362), Expect = 7e-34
Identities = 80/167 (47%), Positives = 105/167 (61%), Gaps = 7/167 (4%)
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
+ GF R P QLSGGQ+QR+ALARAL +EP++LLLDEP LDAKVR+ LR ++++ E
Sbjct: 2 MDGFAKRYPAQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLRKLHDE 61
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKL 240
IT+++VTHDQEEA+ ++DRI VMN GRIEQ+G P E+Y NP + FV FLG NL
Sbjct: 62 FQITSVFVTHDQEEALDVADRIVVMNEGRIEQMGTPEEVYENPASPFVYDFLGNVNLFHG 121
Query: 241 RSTNGVACLGELCFNV-------GVDGPVKVFFRPESVEIGKEGVEA 280
R G +G + VDG V S+ K+ V+A
Sbjct: 122 RVHKGKLNVGSVELEAPEHKHISNVDGVAYVRPHHLSISRTKQSVDA 168
>pir||C64666 glutamine transport protein glnQ - Helicobacter pylori (strain
26695) >gi|2314330|gb|AAD08217.1| (AE000623) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Helicobacter pylori 26695]
Length = 248
Score = 145 bits (361), Expect = 9e-34
Identities = 81/244 (33%), Positives = 147/244 (60%), Gaps = 8/244 (3%)
Query: 2 VRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V +E +G++K + + ++ + GE+ ILGPSGCGK+T L+ + GLE+ ++G +L
Sbjct: 3 VILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKINEGEIL 62
Query: 60 FDGRDV----TFLPPYSRNIGFVFQDYALFPHMNVFKNVAFG-LEVRKLPRKEIERKVRE 114
F+ ++ T + IG VFQ+Y LFPH+NV N+ ++V+K + E+ + E
Sbjct: 63 FENTNLNNKATNWNQMRQKIGMVFQNYELFPHLNVLDNILLAPMKVQKRSKDEVISQAIE 122
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
+L+ VGL+ + P++LSGGQ+QRVA+ R+L + P+++L DE ++LD ++ + + +E+
Sbjct: 123 LLKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEV-LEV 181
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGT 234
G++ + VTH+ + A I+ +I + G+I + E + +PK++ KFL T
Sbjct: 182 ILELATTGMSMVIVTHEMKFAQKIAHKIVFFDSGKIAEENNAKEFFNHPKSQRAQKFLET 241
Query: 235 GNLL 238
+ L
Sbjct: 242 FHFL 245
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 144 bits (359), Expect = 2e-33
Identities = 80/214 (37%), Positives = 128/214 (59%), Gaps = 10/214 (4%)
Query: 1 MVRVELRGVEKKFPGFKLR----VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M +E+R + K F ++R V+LEV GE ISI+GPSG GK+T L +I L+ PD G
Sbjct: 1 MKAIEVRDLRKSFDSGRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVPDSG 60
Query: 57 NVLFDGRDVTFLPPYSR----NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
+ GRD++ SR IGFVFQ + L P++ +NV + K + +E +
Sbjct: 61 TICVAGRDLSRERDLSRLRAEEIGFVFQLHNLIPNLTALENVEIPMFAVK--HENMEERA 118
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
E+LE V L +R P +LSGG++QRVA+ARAL +P ++L DEP +LD++ + +
Sbjct: 119 MELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSRTSQRVLR 178
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMN 206
+++ +Q++ G+T + VTH+ + A S I +++
Sbjct: 179 KLRELQEDEGVTLVVVTHEPDVAAMASRTIRILD 212
>pir||B72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980543|gb|AAD35151.1|AE001692_8 (AE001692)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 338
Score = 143 bits (358), Expect = 2e-33
Identities = 90/258 (34%), Positives = 144/258 (54%), Gaps = 26/258 (10%)
Query: 1 MVRVELRGVEKKFP----------GFKLRVD---LEVKDGELISILGPSGCGKTTTLRII 47
M +E++G++K FP G+ VD ++K GE ++++G SGCGKTTT + I
Sbjct: 1 MKLLEVKGLKKYFPLTKGFFKKVVGYVRAVDDVSFDIKQGETLALVGESGCGKTTTAKSI 60
Query: 48 AGLERPDKGNVLF--DGRDVTF-------LPPYSRNIGFVFQD--YALFPHMNVFKNVAF 96
P G+V+ DG+DV L PY R + +FQ+ +L P M V + V
Sbjct: 61 LRAIDPTDGDVILHLDGKDVNIAKLSRDELKPYRRYMQMIFQNPYTSLNPRMKVKEIVGE 120
Query: 97 GLEVRKLPR-KEIERKVREVLELVGLKG-FENRMPEQLSGGQQQRVALARALVIEPEVLL 154
L V + + KE+E +V E+L+ VGL+ + R P SGGQ+QR+ +ARA+ + P++++
Sbjct: 121 PLLVNGIAKGKELEDRVAELLKAVGLRPEYMIRYPHAFSGGQRQRIVIARAIALRPKLVV 180
Query: 155 LDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVG 214
DEP S LD +R + + +Q+E +T +++THD ISDR+AVM G+I ++
Sbjct: 181 CDEPTSALDVSIRAQILNLLMDLQEEFALTYLFITHDLSVVEHISDRVAVMYLGKIVELS 240
Query: 215 RPLELYYNPKTEFVAKFL 232
E++ NPK + L
Sbjct: 241 STEEIFENPKHPYTETLL 258
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 139 bits (348), Expect = 3e-32
Identities = 79/222 (35%), Positives = 127/222 (56%), Gaps = 3/222 (1%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +E+ + KK+ F + +VK GE+ + LGP+G GKTTT+ ++ L +P G
Sbjct: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
Query: 59 LFDGRDVTFLPPYSRN-IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ G DV P R IG VFQD +L + ++N+ + L +E++ K+ E+L+
Sbjct: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
V L F++R + SGG Q+R+ +ARAL+ EPE+L LDEP LD + R + I+ +
Sbjct: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
++E +T TH +EA ++DRIA+++ G+I G EL
Sbjct: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
>emb|CAB92896.1| (AL356992) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 343
Score = 137 bits (342), Expect = 2e-31
Identities = 86/240 (35%), Positives = 133/240 (54%), Gaps = 9/240 (3%)
Query: 2 VRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
+ V + G+ K F + V L + GE+ +LGPSG GKT L+ + GL +P+KG VL
Sbjct: 10 IEVVVEGLTKSFGKQSIWRDVSLTLPAGEVSVMLGPSGTGKTVFLKSLIGLLKPEKGRVL 69
Query: 60 FDGRDVTFLPPYS-----RNIGFVFQDYALFPHMNVFKNVAFGL-EVRKLPRKEIERKVR 113
+G D+ P + G +FQD ALF M++F N+AF L E + EI R V
Sbjct: 70 INGVDMVNSPERDIYETRKLFGLMFQDGALFGSMSLFDNIAFPLREHTRKKESEIRRIVM 129
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
E +E+VGL G E ++P ++SGG ++R LARALV++P+++L DEP S LD +
Sbjct: 130 ERIEVVGLLGAEGKLPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTAYISQL 189
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLG 233
+ + +L T + VTH+ + A + D + ++ ++ G P E+ VA+FLG
Sbjct: 190 LIDLNAQLDATMLIVTHNLDIAATVPDNMGMLFLRQLVTFG-PREVLLTSDEPVVAQFLG 248
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 136 bits (340), Expect = 3e-31
Identities = 86/251 (34%), Positives = 134/251 (53%), Gaps = 13/251 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +E+ + KKF F+ V +VK GE+ + LGP+G GKTTT+ I+ L +P G
Sbjct: 77 MYAIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKA 136
Query: 59 LFDGRDVTF-LPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
G DV R IG VFQD ++ + ++N+ V L KE++ K+ +L+
Sbjct: 137 FVAGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLK 196
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
V L F +++ + SGG Q+R+ +AR+L+ PEVL LDEP LD + R + I+ +
Sbjct: 197 FVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYIEAM 256
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
++E +T TH EEA ++DR+A+++ GRI G EL K L ++
Sbjct: 257 KEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEEL----------KRLVGSDV 306
Query: 238 LKLRSTNGVAC 248
+ L+ NG C
Sbjct: 307 VYLKVENGAEC 317
>pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumoniae (strain
CWL029) >gi|4376554|gb|AAD18429.1| (AE001613) Dipeptide
Transporter ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163441|gb|AAF73675.1| (AE002208) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978654|dbj|BAA98490.1| (AP002546) dipeptide
transporter ATPase [Chlamydophila pneumoniae J138]
Length = 341
Score = 136 bits (338), Expect = 5e-31
Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 23/334 (6%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
+ ++ V KK L +V V GE+ I+G SG GKTT LR + L+ P G++
Sbjct: 9 ISVQDVSKKLGDHILLSKVSFSVYPGEVFGIVGHSGSGKTTLLRCLDFLDMPTSGSISVA 68
Query: 62 GRDVTFLPP-------YSRNIGFVFQDYALFPHMNVFKNVAFGLEVR--KLPRKEIERKV 112
G D + LP +S+ + ++ Q+Y LF VF+N+A+ L + ++ + E+E +V
Sbjct: 69 GFDNS-LPTQKFSRRNFSKKVAYISQNYGLFSSKTVFENIAYPLRIHHSEMSKSEVEEQV 127
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
+ L + L + P LSGGQ+Q+VA+ARA+V +PEV+L DE S LD K E++
Sbjct: 128 YDTLNFLNLYHRHDAYPGNLSGGQKQKVAIARAIVCQPEVVLCDEITSALDPKSTENIIE 187
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+ ++ +E GIT + V+H+ + I + VM+ G +E++G EL+ N + +
Sbjct: 188 RLLQLNQERGITLVLVSHEIDVVKKICSHVLVMHQGAVEELGTTEELFLNSENSITNEL- 246
Query: 233 GTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIG--KEGVEAEVMDYEILPG 290
+A L F + +++ F E G + ++ ++ IL G
Sbjct: 247 -------FHEDINIAALSSCYFAEDREEVLRLNFSKELAIQGIISKVIQTGLVSINILSG 299
Query: 291 RIR-FRLSVQGKEIIAEDSLARYEEIPKKVYIKV 323
I FR S G II + + K++ I++
Sbjct: 300 NINLFRKSPMGFLIIVLEGEVEQRKKAKELLIEL 333
>sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PROTEIN AOTP
>gi|11277315|pir||T44458 histidine/ornithine transport
protein aotP [imported] - Pseudomonas aeruginosa
>gi|11347446|pir||A83535 arginine/ornithine transport
protein AotP PA0892 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|2668599|gb|AAC71074.1| (AF012537)
ATPase [Pseudomonas aeruginosa]
>gi|9946792|gb|AAG04281.1|AE004523_9 (AE004523)
arginine/ornithine transport protein AotP [Pseudomonas
aeruginosa]
Length = 254
Score = 134 bits (333), Expect = 2e-30
Identities = 82/250 (32%), Positives = 140/250 (55%), Gaps = 19/250 (7%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++E++ + K++ ++ V L K G++ISI+G SG GK+T LR I LE+P G +
Sbjct: 1 MYKLEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKI 60
Query: 59 LFDGRDVTFLPPYS---------------RNIGFVFQDYALFPHMNVFKNVAFG-LEVRK 102
L +G ++ +P + VFQ + L+ HM+ +NV + V
Sbjct: 61 LLNGEELKLVPGRDGALKAADSRQLQRMRSRLSMVFQHFNLWSHMSALENVIEAPVHVLG 120
Query: 103 LPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNL 162
+ +KE K L VG+ ++ P +SGG+QQRVA+ARAL +EPEV+L DEP S L
Sbjct: 121 VSKKEAIEKAEHYLAKVGVAHRKDAYPAHMSGGEQQRVAIARALAVEPEVMLFDEPTSAL 180
Query: 163 DAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYN 222
D ++ + ++ + +E G T + VTH+ A +S+++ ++ G +E+ G P E+ N
Sbjct: 181 DPELVGEVLKVMQDLAQE-GRTMVVVTHEMGFAREVSNQLVFLHKGLVEEHGCPKEVLAN 239
Query: 223 PKTEFVAKFL 232
P+++ + +FL
Sbjct: 240 PQSDRLKQFL 249
>pir||B82020 ABC transporter ATP-binding protein NMA0254 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7379016|emb|CAB83562.1| (AL162752) ABC transporter
ATP-binding protein [Neisseria meningitidis Z2491]
Length = 216
Score = 133 bits (332), Expect = 2e-30
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 11/218 (5%)
Query: 1 MVRVELRGVEKKFPG-FKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M+R E V K +PG F+ V ++ GE+I I G SG GK+T L++I+G+ +P +G
Sbjct: 1 MIRFEQ--VSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTVLKLISGITKPSRGK 58
Query: 58 VLFDGRDVTFLPPYS-----RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
+LF+G+D+ L ++IG VFQD+ + NV +NV L + P ++ E +
Sbjct: 59 ILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVILPLRIIGYPPRKAEERA 118
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
R +E VGLKG E P LSGG+QQR+ +ARA+V +P +L+ DEP +NLD + M
Sbjct: 119 RIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPSLLIADEPSANLDRAYALDI-M 177
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
E+ + E G T + HD+ RI ++ GR+
Sbjct: 178 ELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRL 215
>sp|P30769|MKL_MYCLE POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDING PROTEIN MKL
>gi|419681|pir||S31144 mkl protein - Mycobacterium
leprae >gi|581333|emb|CAA78667.1| (Z14314) E.coli malK
homologue; start codon gtg [Mycobacterium leprae]
Length = 347
Score = 132 bits (330), Expect = 4e-30
Identities = 86/239 (35%), Positives = 128/239 (52%), Gaps = 9/239 (3%)
Query: 2 VRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V +E++G+ K F ++ D L++ GE+ +LGPSG GK+ L+ + GL RP++G++L
Sbjct: 14 VAIEVKGLTKSFGSSRIWEDVTLDIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIL 73
Query: 60 FDGRDVTF-----LPPYSRNIGFVFQDYALFPHMNVFKNVAFGL-EVRKLPRKEIERKVR 113
DG D+ L G +FQD ALF MN++ N AF L E K EI V
Sbjct: 74 IDGTDIIECSAKELYEIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVM 133
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
E L+LVGL G E + P ++SGG + LARALV++P+++L DEP S LD L
Sbjct: 134 EKLQLVGLGGDEKKFPGEISGGMRNVPGLARALVLDPQIILCDEPDSGLDPVRTAYLSQL 193
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
I I ++ T + VTH+ A + D + ++ + G P E+ V +FL
Sbjct: 194 IMDINAQIDATILIVTHNVNIARTVPDNMGMLFRKHLVMFG-PREVLLTSDEPVVRQFL 251
>sp|O06784|MKL_MYCTU POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDING PROTEIN MKL
>gi|7445958|pir||B70534 probable ribonucleotide
transport atp- - Mycobacterium tuberculosis (strain
H37RV) >gi|2143306|emb|CAB09379.1| (Z95972) hypothetical
protein Rv0655 [Mycobacterium tuberculosis]
Length = 359
Score = 132 bits (330), Expect = 4e-30
Identities = 86/239 (35%), Positives = 127/239 (52%), Gaps = 9/239 (3%)
Query: 2 VRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V +E+ G+ K F ++ D L + GE+ +LGPSG GK+ L+ + GL RP++G+++
Sbjct: 26 VSIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSII 85
Query: 60 FDGRDVTF-----LPPYSRNIGFVFQDYALFPHMNVFKNVAFGL-EVRKLPRKEIERKVR 113
DG D+ L G +FQD ALF MN++ N AF L E K EI V
Sbjct: 86 IDGTDIIECSAKELYEIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVM 145
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
E L LVGL G E + P ++SGG ++R LARALV++P+++L DEP S LD L
Sbjct: 146 EKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTAYLSQL 205
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
I I ++ T + VTH+ A + D + ++ + G P E+ V +FL
Sbjct: 206 IMDINAQIDATILIVTHNINIARTVPDNMGMLFRKHLVMFG-PREVLLTSDEPVVRQFL 263
>pir||E81247 cell division ATP-binding protein FtsE NMB0007 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7225232|gb|AAF40486.1| (AE002359) cell division
ATP-binding protein FtsE [Neisseria meningitidis MC58]
Length = 216
Score = 132 bits (329), Expect = 5e-30
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 11/218 (5%)
Query: 1 MVRVELRGVEKKFPG-FKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M+R E V K +PG F+ V ++ GE+I I G SG GK+T L++I+G+ +P +G
Sbjct: 1 MIRFEQ--VSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTILKLISGITKPSRGK 58
Query: 58 VLFDGRDVTFLPPYS-----RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
+LF+G+D+ L ++IG VFQD+ + NV +NV L + P ++ E +
Sbjct: 59 ILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVILPLRIIGYPPRKAEERA 118
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
R +E VGLKG E P LSGG+QQR+ +ARA+V +P +L+ DEP +NLD + M
Sbjct: 119 RIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLIADEPSANLDRAYALDI-M 177
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
E+ + E G T + HD+ RI ++ GR+
Sbjct: 178 ELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRL 215
>pir||H71718 probable ribonucleotide transport ATP-binding protein mkl (mkl)
RP097 - Rickettsia prowazekii
>gi|3860666|emb|CAA14567.1| (AJ235270) POSSIBLE
RIBONUCLEOTIDE TRANSPORT ATP-BINDING PROTEIN MKL (mkl)
[Rickettsia prowazekii]
Length = 252
Score = 132 bits (328), Expect = 7e-30
Identities = 84/238 (35%), Positives = 129/238 (53%), Gaps = 11/238 (4%)
Query: 3 RVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
++++R + K F K+ +DL+VK G + ILG SG GK+ ++ I GL +PDKG +
Sbjct: 8 KIKIRSLYKSFAHHKVLDGIDLDVKKGSSLVILGGSGSGKSVLIKSIVGLIKPDKGQIFI 67
Query: 61 DGRDV-----TFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREV 115
D ++ T + +GF+FQ ALF +NV N+ F +KL +KE
Sbjct: 68 DNLEIQDISNTHKFEIMKGVGFLFQGGALFDSLNVRDNITFN--TKKLSKKEKNDLAGAK 125
Query: 116 LELVGLKG-FENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
L VGL + P +LSGG Q+RVALARA+ P +L LDEP + LD + + I
Sbjct: 126 LNSVGLSTRILDLYPSELSGGMQKRVALARAICSTPSILFLDEPTTGLDPIMANVINELI 185
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+IQ+EL TT+ +THD I+ IA++ G+I+ G E+ N ++ +F+
Sbjct: 186 IKIQEELCATTITITHDMISTEKIAKEIAMIYHGKIQWYGSKEEM-RNSDNPYLTQFI 242
>gb|AAG35385.1| (AF030414) ModC [Gluconacetobacter diazotrophicus]
Length = 254
Score = 132 bits (328), Expect = 7e-30
Identities = 77/220 (35%), Positives = 131/220 (59%), Gaps = 13/220 (5%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG---- 56
++RV +G F G+ +D + + ++ GPSGCGK+T LR IAGL+RP G
Sbjct: 6 LLRVAFQGRAGTF-GYDFALDAPAQG--VTALFGPSGCGKSTILRCIAGLDRPAAGYCAL 62
Query: 57 --NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVRE 114
V D + F+P + R IG+VFQ+ +LFPH++V N+ +G VR L R + + +
Sbjct: 63 GDTVWQDAK--RFVPAWRRPIGYVFQEPSLFPHLSVRGNLLYGAGVRSLRR--LPPDLAD 118
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
++ ++ L+ R LSGG++QRVA+ RAL+ P +LL+DEPLS LD+ + + +
Sbjct: 119 IIAMLELETLLERGVAHLSGGERQRVAIGRALLRRPALLLMDEPLSALDSARKNEILPFL 178
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVG 214
+ + +++ I +YV+HD E +++D + ++ GR+ + G
Sbjct: 179 QMLHRQIRIPILYVSHDIGEIASLADHVVLLAPGRVVESG 218
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 131 bits (326), Expect = 1e-29
Identities = 80/227 (35%), Positives = 126/227 (55%), Gaps = 6/227 (2%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++E+ +EK K+ + LEV GE++ +LGP+G GKTTT +I GL P G V
Sbjct: 1 MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKV 60
Query: 59 LFDGRDVTFLPPYSR---NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREV 115
L DG DVT P R IG++ Q+ ++F ++V N+ ++ +K + KV ++
Sbjct: 61 LLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQIFYKDKKILHDKVEQM 120
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LEL+ ++ R LSGG+++R +AR+L+ EP+ LLLDEP + +D ++ IK
Sbjct: 121 LELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTLIK 180
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYN 222
+ K LGI + H+ E +AI DR V+ G + G E+ N
Sbjct: 181 EL-KRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEIATN 226
>pir||B83629 probable ATP-binding component of ABC transporter PA0136 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9945965|gb|AAG03526.1|AE004451_7 (AE004451) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 523
Score = 131 bits (325), Expect = 2e-29
Identities = 73/213 (34%), Positives = 124/213 (57%), Gaps = 6/213 (2%)
Query: 3 RVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
R+ELRG+ K++PG R+DL + GE+ ++LG +G GK+T ++II G+ RPD G + +
Sbjct: 11 RLELRGISKRYPGCLANDRIDLCIDAGEIHALLGENGAGKSTLMKIIYGVTRPDAGEIRW 70
Query: 61 DGRDVTFLPPY---SRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
G V P + IG VFQ ++LF ++V +N+A L + +E ++REV +
Sbjct: 71 QGEPVQVRDPARARALGIGMVFQHFSLFETLSVAENIALALGAEAGSPRRLEARIREVSQ 130
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
G+ R+ LS G++QRV + R L+ + +L+LDEP S L + E L + ++R+
Sbjct: 131 RYGMPLEPRRLVHGLSIGERQRVEIVRCLMQDIRLLILDEPTSVLTPREAEDLFVTLRRL 190
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
+E G + ++++H E A+ R V+ GR+
Sbjct: 191 AEE-GCSVLFISHKLAEVRALCQRATVLRGGRV 222
>gi|11498996 iron (III) ABC transporter, ATP-binding protein (hemV-3)
[Archaeoglobus fulgidus] >gi|7430360|pir||H69424
probable iron(III) ABC transporter hemV-3 -
Archaeoglobus fulgidus >gi|2649168|gb|AAB89842.1|
(AE001007) iron (III) ABC transporter, ATP-binding
protein (hemV-3) [Archaeoglobus fulgidus]
Length = 405
Score = 130 bits (323), Expect = 3e-29
Identities = 89/266 (33%), Positives = 145/266 (54%), Gaps = 16/266 (6%)
Query: 2 VRVELRGVEKKFPGFKLRVDL--EVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
+R+ ++GV K ++ D+ EV +GEL+++LGP+G GKTT LR I G+ +P KG VL
Sbjct: 1 MRLVVKGVSVKLGSREVLKDVTFEVGEGELLALLGPNGSGKTTMLRTIFGMLKPLKGVVL 60
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFG----LEVRKLPRKEIERKVREV 115
DGR+V +R +GF+ QD + ++ V V G L K P++E R E
Sbjct: 61 LDGREVGSAEEAARKLGFLPQDTPM-TNLKVIDVVMLGRTPYLSGLKRPKEEDYRAAMEA 119
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
L+ VG++ +R+ +LSGG++Q+V LAR +PE++LLDEP ++LD + + MEI
Sbjct: 120 LKEVGMEKMADRLFSELSGGERQKVMLARVFAQQPEIMLLDEPTAHLDIAAQIEI-MEIV 178
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPK------TEFVA 229
R + E G + HD A + + +I ++ G + GRP ++ + V
Sbjct: 179 RSKVEQGKAAIVAIHDINLASSFATKILMVKDGVVVYAGRPEDVITEESIRDVFGADVVV 238
Query: 230 KFLGTGNLL--KLRSTNGVACLGELC 253
+ G G + KL+ NG+ + +C
Sbjct: 239 RKYGRGVYIAPKLKVPNGLRRVHVIC 264
>pir||F83598 cell division protein FtsE PA0374 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946226|gb|AAG03763.1|AE004475_5 (AE004475) cell
division protein FtsE [Pseudomonas aeruginosa]
Length = 223
Score = 129 bits (322), Expect = 4e-29
Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 11/218 (5%)
Query: 1 MVRVELRGVEKKFPGFKL---RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M+R E G K++P + V V GE++ + G SG GK+T LR+I +ERP G
Sbjct: 1 MIRFEQVG--KRYPNGHVGLHEVSFRVHRGEILFVTGHSGAGKSTLLRLILAMERPTSGK 58
Query: 58 VLFDGRDV-----TFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
+L G+D+ +P R IG VFQ++ L V N+A L++ +P+ EI ++V
Sbjct: 59 LLLGGQDLGRITTAQIPFLRRQIGVVFQNHQLLTDRTVADNIALPLQILGMPKPEIAKRV 118
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
LE V LK +P LS GQQQRV +ARA+V +P +LL DEP NLD ++ +
Sbjct: 119 ASALERVNLKEKGEALPSDLSTGQQQRVGIARAIVHQPALLLADEPTGNLDPRLASEIMG 178
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
+ I + LG T + +HD + R+ + GRI
Sbjct: 179 VFEDINR-LGTTVLIASHDLALIARMRHRMLTLQRGRI 215
>gb|AAB36524.1| (U76418) FtsE-like protein [Neisseria gonorrhoeae]
Length = 216
Score = 129 bits (320), Expect = 6e-29
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 11/218 (5%)
Query: 1 MVRVELRGVEKKFPG-FKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M+R E V K +PG F+ V ++ GE+I I G SG GK+T L++I+G+ +P
Sbjct: 1 MIRFEQ--VSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTVLKLISGITKPSMAK 58
Query: 58 VLFDGRDVTFLPPYS-----RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
VLF+G+D+ L ++IG VFQD+ + NV +NV L + P ++ E +
Sbjct: 59 VLFNGQDLGTLSDNQIGIMRQHIGIVFQDHKILNDRNVLQNVILPLRIIGYPPRKAEERA 118
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
R +E VGLKG E P LSGG+QQR+ +ARA+V +P +L+ DEP +NLD + M
Sbjct: 119 RIAIEKVGLKGRELDDPVTLSGGEQQRLWIARAVVHQPGLLIADEPSANLDRAYALDI-M 177
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
E+ + E G T + HD+ RI ++ GR+
Sbjct: 178 ELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRL 215
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 127 bits (317), Expect = 1e-28
Identities = 72/221 (32%), Positives = 123/221 (55%), Gaps = 3/221 (1%)
Query: 2 VRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V ++ + K+F F ++ EV +GE+ LGP+G GK+TT++++ + +P +G
Sbjct: 10 VAIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTAT 69
Query: 60 FDGRDVTFLPPYSR-NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
G DV P R +IG V Q+Y + ++N+ + +P++ E + +E+LE+
Sbjct: 70 VSGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEM 129
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
V L R E SGG ++R+ +A +L+ P +L LDEP LDA+ R ++ I +++
Sbjct: 130 VELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLK 189
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
+E +T TH EEA DRIA+++ G+I +G P EL
Sbjct: 190 EEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKEL 230
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 127 bits (317), Expect = 1e-28
Identities = 72/221 (32%), Positives = 123/221 (55%), Gaps = 3/221 (1%)
Query: 2 VRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V ++ + K+F F ++ EV +GE+ LGP+G GK+TT++++ + +P +G
Sbjct: 10 VAIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTAT 69
Query: 60 FDGRDVTFLPPYSR-NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
G DV P R +IG V Q+Y + ++N+ + +P++ E + +E+LE+
Sbjct: 70 VSGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEM 129
Query: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
V L R E SGG ++R+ +A +L+ P +L LDEP LDA+ R ++ I +++
Sbjct: 130 VELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLK 189
Query: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
+E +T TH EEA DRIA+++ G+I +G P EL
Sbjct: 190 EEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKEL 230
>pir||T02364 hypothetical protein T8F5.19 - Arabidopsis thaliana
>gi|3335345|gb|AAC27147.1| (AC004512) Contains
similarity to ABC transporter gb|1651790 from
Synechocystis sp. gb|D90900. [Arabidopsis thaliana]
Length = 364
Score = 127 bits (317), Expect = 1e-28
Identities = 97/255 (38%), Positives = 129/255 (50%), Gaps = 25/255 (9%)
Query: 2 VRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V +E R V K F + V +++ GE + ++GPSG GK+T L+I+AGL PDKG V
Sbjct: 83 VLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVY 142
Query: 60 FDGRDVTFLPPYSR----NIGFVFQDYALFPHMNVFKNVAFGLEVR-KLPRKEIERKVRE 114
G+ L IG VFQ ALF ++V +NV F L R K+ +I V +
Sbjct: 143 IRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQ 202
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARAL-------VIEPEVLLLDEPLSNLD---A 164
L VGLKG ENR+P +LSGG ++RVALAR+L VIEPEVLL DEP + LD +
Sbjct: 203 TLAAVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIAS 262
Query: 165 KVRESLRMEIKRIQKEL----GITTMY--VTHDQEEAMAISDRIAVMNFGRIEQVGRPLE 218
V E L + ++ G Y VTH DR+ + G+I G E
Sbjct: 263 TVVEDLIRSVHMTDEDAVGKPGKIASYLVVTHQHSTIQRAVDRLLFLYEGKIVWQGMTHE 322
Query: 219 L--YYNPKTEFVAKF 231
NP + V F
Sbjct: 323 FTTSTNPIVQQVPSF 337
>pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC - Bacillus
subtilis >gi|2293177|gb|AAC00255.1| (AF008220)
transporter [Bacillus subtilis]
>gi|2635522|emb|CAB15016.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 253
Score = 126 bits (314), Expect = 3e-28
Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 14/204 (6%)
Query: 1 MVRVELRGVEKKFPGFKLR-------VDLEVKDGELISILGPSGCGKTTTLRIIAGLERP 53
MV +E + K + G KL +D+ ++ GE +SI+G SG GKTT L +++ +++
Sbjct: 1 MVILEANKIRKSY-GNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLLNVLSSIDQV 59
Query: 54 DKGNVLFDGRDVTFLPPYS------RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE 107
G + +G D+T + +++GF+FQDY L + V +N+ L + KL +KE
Sbjct: 60 SHGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTLTVKENILLPLSITKLSKKE 119
Query: 108 IERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVR 167
RK EV + +G+ ++ P ++SGGQ+QR + RA + +P ++ DEP LD+K
Sbjct: 120 ANRKFEEVAKELGIYELRDKYPNEISGGQKQRTSAGRAFIHDPSIIFADEPTGALDSKSA 179
Query: 168 ESLRMEIKRIQKELGITTMYVTHD 191
L ++ ++ ++ T + VTHD
Sbjct: 180 SDLLNKLSQLNQKRNATIIMVTHD 203
>pir||H70788 probable peptidetransport system ABC-transporter ATP-binding
protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2960087|emb|CAA17985.1| (AL022121) dppD
[Mycobacterium tuberculosis]
Length = 548
Score = 124 bits (309), Expect = 1e-27
Identities = 83/240 (34%), Positives = 132/240 (54%), Gaps = 18/240 (7%)
Query: 3 RVELRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDG 62
RVE R V+ V + ++I+G SG GK+T R++ GL +P G V+FDG
Sbjct: 301 RVESRAVDG--------VSFRLPRASTLAIVGESGSGKSTLARMVLGLLQPTSGTVVFDG 352
Query: 63 R-DVTFLP-----PYSRNIGFVFQD--YALFPHMNVFKNVAFGLEVRKL-PRKEIERKVR 113
DV L + R + VFQ+ +L P +VF+ + L V + R++ +R VR
Sbjct: 353 TYDVGALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVR 412
Query: 114 EVLELVGL-KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
E+++ V L R P +LSGGQ+QRVA+ARAL + PEVL+ DE +S LD V+ +
Sbjct: 413 ELVDQVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQILD 472
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFL 232
+ +Q +LG+T ++++HD I+D + VM GR+ + E++ P+ E+ + L
Sbjct: 473 LLADLQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQLL 532
Score = 103 bits (254), Expect = 3e-21
Identities = 74/241 (30%), Positives = 114/241 (46%), Gaps = 22/241 (9%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGL----ERPDKGNVLFDGRDVTFLPPY---- 71
VDL V+ G+ ++++G SG GK+TT I GL R G V+FDGRD+T
Sbjct: 28 VDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGGRITAGRVVFDGRDITGADAKRLRS 87
Query: 72 --SRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV--REVLELVGLKGFEN- 126
R IG+V QD P N+ G +V + R + + R +EL+ G +
Sbjct: 88 IRGREIGYVPQD----PMTNLNPVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDP 143
Query: 127 -----RMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
R P QLSGG QR +A L P +L+ DEP S LD V+ + ++ + EL
Sbjct: 144 AKQAGRYPHQLSGGMCQRALIAIGLAGRPRLLIADEPTSALDVTVQRQVLDHLQGLTDEL 203
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
G + +THD A ++ + V+ G + + G + +P+ E+ + + L R
Sbjct: 204 GTALLLITHDLALAAQRAEAVVVVRRGVVVESGAAQSILQSPQHEYTRRLVAAAPSLTAR 263
Query: 242 S 242
S
Sbjct: 264 S 264
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 123 bits (307), Expect = 2e-27
Identities = 70/233 (30%), Positives = 129/233 (55%), Gaps = 6/233 (2%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++++ + K + + D L +K GE++ + GP+G GKTT II GL RPD G +
Sbjct: 15 MDSLQIKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQL 74
Query: 59 LFDGRDVTFLPPYSR---NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREV 115
L + ++T LP Y R IG++ Q+ ++F ++V N+ +E+ + ++ IE+K +
Sbjct: 75 LLNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQKTHNL 134
Query: 116 LELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIK 175
LE + ++ LSGG+++R+ +AR+ VIEP+ ++LDEPL+ +D ++ I
Sbjct: 135 LEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIKKLIT 194
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFV 228
+ +E I + H+ + + I DR V+ G++ G E+ + K + V
Sbjct: 195 YL-REFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEIANSKKVKEV 246
>pir||F72405 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980701|gb|AAD35296.1|AE001705_7 (AE001705)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 233
Score = 123 bits (307), Expect = 2e-27
Identities = 79/220 (35%), Positives = 128/220 (57%), Gaps = 28/220 (12%)
Query: 2 VRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
V +++ G+ K F G K+ + V GE +++LGPSGCGKTT LRI++GLE
Sbjct: 6 VILKVEGLRKDFNGVKVIENWGFSVGKGERVALLGPSGCGKTTFLRIVSGLED------- 58
Query: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
+ G+ F + IG+VFQ+ L P + +N+ L R++ +R + +LE V
Sbjct: 59 YQGKVKVF----TDKIGYVFQEPRLIPWKTITENLM-------LIRRDTDR-IASLLEKV 106
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
LKGFEN P QLS G +QRV RAL+++P++LLLDEP LD K + + + + +
Sbjct: 107 ELKGFENHYPWQLSEGMKQRVNFVRALLVDPDLLLLDEPFDALDLKTKMKVMDLLVDLWQ 166
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
+ + ++VTH+ +EA+ +S+RI +++ GRP ++
Sbjct: 167 KRRFSIVFVTHNVKEAVFLSERIFLLS-------GRPSKI 199
>pir||H81784 probable ABC transporter ATP-binding protein NMA2131 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380752|emb|CAB85343.1| (AL162758) putative ABC
transporter ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 254
Score = 123 bits (306), Expect = 3e-27
Identities = 69/231 (29%), Positives = 131/231 (55%), Gaps = 6/231 (2%)
Query: 3 RVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
R+ ++ ++K F ++ LE++ GE++ +LGP+G GKTT+ +I GL D G+V+
Sbjct: 17 RLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGAGKTTSFYMIVGLIAADAGSVML 76
Query: 61 DGRDVTFLPPYSR---NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
DG+++ LP + R +G++ Q+ ++F M V +N+ LE+R + +I+R++ ++L
Sbjct: 77 DGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEIRTKDKNQIDREIEKLLA 136
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + LSGG+++RV +AR L ++P +LLDEP + +D ++ +I
Sbjct: 137 DLNIGHLRRSPTPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIAVIDIQ-KIIGF 195
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFV 228
K GI + H+ E ++I DR +++ G + G+P +L N + V
Sbjct: 196 LKSRGIGVLITDHNVRETLSICDRAYIISDGAVLASGKPDDLVGNEQVRSV 246
>dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 332
Score = 123 bits (306), Expect = 3e-27
Identities = 77/244 (31%), Positives = 134/244 (54%), Gaps = 22/244 (9%)
Query: 2 VRVELRGVEKKFP---GFKLR----------VDLEVKDGELISILGPSGCGKTTTLRIIA 48
V +E +G+ K F GF R VDL + GE + I+G SGCGK+T +++
Sbjct: 4 VLLEAKGLTKHFDVSEGFFKRKKAVLRAVDGVDLTIYAGETLGIVGESGCGKSTLGQLLM 63
Query: 49 GLERPDKGNVLFDGRDVTFLPPYS-----RNIGFVFQD--YALFPHMNVFKNVAFGLEVR 101
L P +G + F G D L + +I +FQD +L P M V + + L+
Sbjct: 64 RLLEPTRGTLSFAGSDFLALKGEALRQKRSDIQIIFQDPFSSLNPRMTVREIIGEPLKTH 123
Query: 102 KLPR-KEIERKVREVLELVGL-KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPL 159
+L + ++ ++V E+++ VGL + + R P + SGGQ+QR+ +ARA+ ++P++++ DEP+
Sbjct: 124 RLAKGNDLIKRVDELMDAVGLDRSYAKRYPHEFSGGQRQRIGIARAIALKPKLIICDEPV 183
Query: 160 SNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
S LD ++ + + R+QKE +T +++ H ISDR+AVM G++ ++ L
Sbjct: 184 SALDVSIQAQILNLMVRLQKEFQLTFLFIAHGLPAVKHISDRMAVMYLGKVVELASKDAL 243
Query: 220 YYNP 223
+ P
Sbjct: 244 FAQP 247
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 123 bits (305), Expect = 3e-27
Identities = 70/228 (30%), Positives = 131/228 (56%), Gaps = 13/228 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + + + K + G ++ V L V GE++ +LGP+G GKTTT ++ G+ D GN+
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI 60
Query: 59 LFDGRDVTFLPPYS---RNIGFVFQDYALFPHMNVFKNVAFGLEVR-KLPRKEIERKVRE 114
+ D D++ LP ++ R IG++ Q+ ++F ++V+ N+ L++R L ++ E + E
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE 120
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
++E ++ + M + LSGG+++RV +ARAL P+ +LLDEP + +D ++I
Sbjct: 121 LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVD----PISVIDI 176
Query: 175 KRIQKEL---GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
KRI + L G+ + H+ E +A+ +R +++ G + G P E+
Sbjct: 177 KRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 122 bits (304), Expect = 5e-27
Identities = 73/222 (32%), Positives = 124/222 (54%), Gaps = 8/222 (3%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++E+ + K F GF+ + L V+ GE+ LGP+G GKTTT+ GL +P G+V
Sbjct: 1 MAQIEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSV 60
Query: 59 LFDGRDVTFLPPYSRNI-GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
G DV P + I G++ ++Y +P++ +N+ + E P+ ++ E+L
Sbjct: 61 RIAGMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNVD----ELLA 116
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
LVGL+ ++ + S G +QR+ALA+AL+ +PEV+ LDEP + LD + R I+ +
Sbjct: 117 LVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIREL 176
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
++ G T + +H E + + ++N GRI +VG+ EL
Sbjct: 177 NQK-GKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISEL 217
>pir||C81208 ABC transporter, ATP-binding protein NMB0356 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225578|gb|AAF40799.1| (AE002392) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 254
Score = 122 bits (304), Expect = 5e-27
Identities = 70/231 (30%), Positives = 130/231 (55%), Gaps = 6/231 (2%)
Query: 3 RVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
R+ ++ ++K F ++ LE++ GE+I +LGP+G GKTT+ +I GL D G+V
Sbjct: 17 RLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAADAGSVTL 76
Query: 61 DGRDVTFLPPYSR---NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
DG+++ LP + R +G++ Q+ ++F M V +N+ LE+R + +I+R++ ++L
Sbjct: 77 DGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEIRTKDKNQIDREIEKLLA 136
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + LSGG+++RV +AR L ++P +LLDEP + +D ++ +I
Sbjct: 137 DLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIAVIDIQ-KIIGF 195
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFV 228
K GI + H+ E ++I DR +++ G + G+P +L N + V
Sbjct: 196 LKSRGIGVLITDHNVRETLSICDRAYIISDGTVLASGKPDDLVGNEQVRSV 246
>pir||D83281 histidine transport protein HisP PA2926 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949020|gb|AAG06314.1|AE004718_11 (AE004718)
histidine transport protein HisP [Pseudomonas
aeruginosa]
Length = 255
Score = 122 bits (304), Expect = 5e-27
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 21/256 (8%)
Query: 1 MVRVELRGVEKKFPGFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +++ + K++ ++ V L G++ISI+G SG GK+T LR + LE+P G++
Sbjct: 1 MYSLQVEDIHKRYGSHEVLRGVSLRAGKGDVISIIGSSGSGKSTFLRCVNFLEKPCAGHI 60
Query: 59 LFDGRDVTFLPP---------------YSRNIGFVFQDYALFPHMNVFKNVA-FGLEVRK 102
++ P + VFQ + L+ H+ V +NV + V +
Sbjct: 61 RVGDEELRTRPGALGELRAADPRQLQRIRSRLAMVFQHFNLWSHLTVLENVVECPVNVLR 120
Query: 103 LPRKEIERKVREVLELVGL-KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSN 161
+ R + + R L VGL + E + P +LSGGQQQRVA+ARAL +EP+V+L DEP S
Sbjct: 121 MNRDDAVARARHYLAKVGLAEKVERQYPCELSGGQQQRVAIARALAMEPQVMLFDEPTSA 180
Query: 162 LDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYY 221
LD ++ + ++++ +E G T + VTH+ A +S + ++ G IE+ G P +++
Sbjct: 181 LDPELVGEVLKVMQQLAEE-GRTMVLVTHEMAFARQVSSHVIFLHQGVIEEEGTPDQVFG 239
Query: 222 NPKTEFVAKFLGTGNL 237
P++E + +FL GNL
Sbjct: 240 APRSERLRQFL-AGNL 254
>dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacillus halodurans]
Length = 247
Score = 121 bits (300), Expect = 1e-26
Identities = 83/237 (35%), Positives = 128/237 (53%), Gaps = 22/237 (9%)
Query: 1 MVRVELRGVEKKFP----GFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
++RVE G++K +P G K ++ ++ GELIS++GPSG GK+T LR I L P G
Sbjct: 5 ILRVE--GLKKVYPDGTVGIK-EINTSIRRGELISVIGPSGAGKSTFLRSINRLVEPTSG 61
Query: 57 NVLFDGRDVTF-----LPPYSRNIGFVFQDYALFPHMNVFKNVAFGL---------EVRK 102
+ +G ++ L R IG VFQ Y L +V +NV G + +
Sbjct: 62 AIFVEGENICNARGKKLRQMRRKIGMVFQHYNLIKRSSVLQNVLHGRLGYMSTIKGGLGR 121
Query: 103 LPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNL 162
+ +R + +L+ VGL+ + ++LSGGQQQRV +ARA+ P ++L DEP+++L
Sbjct: 122 FHESDTKRAL-SILKRVGLEEQALKRADELSGGQQQRVGIARAIAQNPTLILADEPIASL 180
Query: 163 DAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
D E++ +K I +E GITT+ H E A +DR+ + G+I G P EL
Sbjct: 181 DPTASENVLHYMKTICQEEGITTVVNLHQVEFAKKFADRMIGIKAGKIVFDGTPREL 237
>gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius]
Length = 245
Score = 121 bits (300), Expect = 1e-26
Identities = 71/220 (32%), Positives = 124/220 (56%), Gaps = 11/220 (5%)
Query: 1 MVRVELRGVEKKFPG---FKL-RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
M ++ L+ V KK+P + L ++L V+ GE ++++G SG GKTT L + + +++ D G
Sbjct: 1 MKQLVLKDVCKKYPNQLNYALDHINLIVEKGEFVAVMGRSGSGKTTLLNVTSIIDKIDSG 60
Query: 57 NVLFDGRDV-TFLPPYSRN-----IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIER 110
N+ +++ TF + N IGFVFQDY L + + +N++ L ++ + +I+
Sbjct: 61 NIYCADKEISTFSDKEATNFRKNDIGFVFQDYMLLDSLTIRENISVALSLKNVDSSKIDD 120
Query: 111 KVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESL 170
+ + L + P QLSGGQ+QRV++ RA++ +PE++ DEP LD K E
Sbjct: 121 LINSYAKRFNLYEQLKKYPYQLSGGQRQRVSIIRAIIKDPEIIFADEPTGALDLKSSEET 180
Query: 171 RMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
M + I K +T + VTHD A + +DR+ ++ G++
Sbjct: 181 MMILSEINKTEKVTILMVTHDVLSA-SYADRVILLKDGKL 219
>gi|11498429 branched-chain amino acid ABC transporter, ATP-binding protein
(braG-2) [Archaeoglobus fulgidus]
>gi|7445760|pir||G69352 branched-chain amino acid ABC
transporter, ATP-binding protein (braG-2) homolog -
Archaeoglobus fulgidus >gi|2649778|gb|AAB90412.1|
(AE001047) branched-chain amino acid ABC transporter,
ATP-binding protein (braG-2) [Archaeoglobus fulgidus]
Length = 248
Score = 120 bits (299), Expect = 2e-26
Identities = 79/248 (31%), Positives = 133/248 (52%), Gaps = 20/248 (8%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M++VE GV +F G V E++ GE++ I+GP+G GKTT +I+GL +PD+G +
Sbjct: 1 MLKVE--GVGIRFGGLIALNNVTFEIRKGEVLGIIGPNGAGKTTLFNVISGLYKPDEGVI 58
Query: 59 LFDGRDVTFLPPYS---RNIGFVFQDYALFPHMNVFKNVAFGL----------EVRKLPR 105
+F+G+++T +PP+ I FQ +L+ ++ N+ L +R+
Sbjct: 59 IFEGKNITTMPPHKIVRLGISRTFQTVSLYFNLPAIGNLLITLTAWYRSGVLSALREENG 118
Query: 106 KEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAK 165
E ++ E+L VGL + L Q+R+++A AL +P++LLLDEP + L+ +
Sbjct: 119 DETFKEAMELLNFVGLDEKAFTPVKNLPQEAQRRLSIAIALATKPKLLLLDEPTAGLNLE 178
Query: 166 VRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKT 225
+ + +EI R KE G+T + H M +SDRI V++ G I G P E+ N +
Sbjct: 179 ETDRI-LEIIRTLKERGVTVAIIEHKMRFIMGVSDRIVVLDSGEIIAEGSPKEIVENERV 237
Query: 226 EFVAKFLG 233
+ +LG
Sbjct: 238 --IKAYLG 243
>pir||G72578 probable ABC transporter ATP-binding protein APE1911 - Aeropyrum
pernix (strain K1) >gi|5105603|dbj|BAA80916.1|
(AP000062) 284aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 284
Score = 120 bits (299), Expect = 2e-26
Identities = 92/279 (32%), Positives = 140/279 (49%), Gaps = 13/279 (4%)
Query: 11 KKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFL 68
KK+ G + RVDLEV GE + ++GP+G GKTT +++ GL R D G VL +G D
Sbjct: 2 KKYRGQPVLDRVDLEVGRGEAVGLVGPNGAGKTTLIKVSLGLARRDGGRVLLNGLDPWRE 61
Query: 69 PPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRM 128
P +G VF+ L M V + + + ++ +R GL+G E +
Sbjct: 62 PRAREGVGVVFERPNLPSSMPVVEFLESAAAIIGSSPSRVDWAIRAA----GLEGHEWKT 117
Query: 129 PEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYV 188
QLS G +QR A+A AL+ EP L+ DEP SNLD R + + R+ +E G++ +
Sbjct: 118 FPQLSAGLKQRAAIAHALLGEPRFLVADEPTSNLDPLERREVLRLLARLNREHGLSLLVS 177
Query: 189 THDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK---LRSTNG 245
+H E + ++ RI V+ GR+ G P +L+ + +A+ + L LRS
Sbjct: 178 SHVIVELLRVATRIYVLAGGRLAAEGSPEDLF---RRAGLARLRTSNPSLAAELLRSLGF 234
Query: 246 VACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMD 284
A L V VDGP+ F+ +G+EGVE +D
Sbjct: 235 EAREDGLGVVVRVDGPLHRFYE-ALARLGREGVEVLGVD 272
>gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stutzeri]
Length = 341
Score = 120 bits (297), Expect = 3e-26
Identities = 77/234 (32%), Positives = 120/234 (50%), Gaps = 19/234 (8%)
Query: 2 VRVELRGVEKKFPGFKL---RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
V ++L+ V K + G K+ +D EV+ G ++++LG SG GK+T R + GLE D G++
Sbjct: 4 VALQLKNVGKSY-GNKVVLESIDFEVRHGSMVALLGTSGAGKSTLFRCLTGLEPIDSGSI 62
Query: 59 LFDGRDVTFLPP-----YSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK-- 111
+ G + L P IGFVFQ L + +NV G + ++P + K
Sbjct: 63 VALGESIHELSPARLRAVRGQIGFVFQQLHLVKRFSALENV-LGARLAEMPIWRVTLKSF 121
Query: 112 -------VREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDA 164
E L+ VG+ + N + LSGGQQQR+A+ARAL +P++++ DEP+S+LD
Sbjct: 122 SRADKVLAFECLDRVGMLDYANTPTQLLSGGQQQRIAIARALAQKPKIIIADEPVSSLDP 181
Query: 165 KVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLE 218
S+ +K +L + + H + A DRI M GR+ G P E
Sbjct: 182 LTARSVLQTLKAAATDLNVAVLCSLHQVDLAREFGDRIVGMRDGRVVFDGTPAE 235
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 119 bits (296), Expect = 4e-26
Identities = 69/228 (30%), Positives = 130/228 (56%), Gaps = 13/228 (5%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + + + K + G ++ V L V GE++ +LGP+G GKTTT ++ G+ GN+
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNI 60
Query: 59 LFDGRDVTFLPPYS---RNIGFVFQDYALFPHMNVFKNVAFGLEVR-KLPRKEIERKVRE 114
+ D D++ LP ++ R IG++ Q+ ++F ++V+ N+ L++R L ++ E + E
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE 120
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
++E ++ + M + LSGG+++RV +ARAL P+ +LLDEP + +D ++I
Sbjct: 121 LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVD----PISVIDI 176
Query: 175 KRIQKEL---GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
KRI + L G+ + H+ E +A+ +R +++ G + G P E+
Sbjct: 177 KRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>sp|P39326|YTFR_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN PPA-FBP
INTERGENIC REGION >gi|1361180|pir||S56454 hypothetical
ABC transporter (ppa-fbp intergenic region) -
Escherichia coli >gi|537070|gb|AAA97125.1| (U14003)
ORF_o417a [Escherichia coli] >gi|1790675|gb|AAC77185.1|
(AE000494) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 417
Score = 119 bits (296), Expect = 4e-26
Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 26/293 (8%)
Query: 8 GVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDV 65
G+ K FPG K VD ++ GE++++LG +G GK+T ++ + G+ D+G + +G+ +
Sbjct: 14 GLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAI 73
Query: 66 T---FLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRK---LPRKEIERKVREVLELV 119
+ IG V+Q+ L P+M+V N+ G E ++ L RKE+E++ E++
Sbjct: 74 SPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASY 133
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
G + S QQ VA+ RA+ + +VL+LDEP ++LD + E L ++ R +
Sbjct: 134 GFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVE-LLFDLMRQLR 192
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
+ G++ ++VTH ++ +SDRI V+ G EL P+ E V LG +
Sbjct: 193 DRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCEL---PQIELVKMMLG-----R 244
Query: 240 LRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRI 292
T+ + G + D PV F GK+G A D E+ PG I
Sbjct: 245 ELDTHALQRAGRTLLS---DKPVAAF-----KNYGKKGTIAP-FDLEVRPGEI 288
>pir||G72687 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE0919 - Aeropyrum pernix (strain
K1) >gi|5104588|dbj|BAA79903.1| (AP000060) 254aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 254
Score = 118 bits (294), Expect = 7e-26
Identities = 77/242 (31%), Positives = 132/242 (53%), Gaps = 21/242 (8%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
++RVE +EK+F G +V+LE++ G++ ++GP+G GKTT + +I+G +PD G V
Sbjct: 6 ILRVE--DLEKRFGGIVALDKVNLEIERGKVTLLIGPNGSGKTTLVNVISGFYKPDGGRV 63
Query: 59 LFDGRDVTFLPPYS-RNIGFV--FQDYALFPHMNVFKNVAFGLE-----------VRKLP 104
LF GRD+T + P+ +G V FQ F ++ V +NV + R+L
Sbjct: 64 LFKGRDITGMSPHEISKLGLVRTFQIPKPFTNLTVLENVLTAADSPGENVYLAGLARRLW 123
Query: 105 ---RKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSN 161
K + E+L VGL +R +LSGGQ + + +ARA++ E++++DEP +
Sbjct: 124 LGFEKRAAARAFEILGWVGLDHMWDRRSGELSGGQMKLLEIARAIMKGAEMIIMDEPAAG 183
Query: 162 LDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYY 221
++ ++ S+ IK + +E GIT + + H DR+ M+ G++ G+P E+
Sbjct: 184 VNPRLAGSIMERIKYLAREKGITFLIIEHRIGLVKEYVDRVYAMSMGKVIASGKPDEVLN 243
Query: 222 NP 223
NP
Sbjct: 244 NP 245
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 116 bits (289), Expect = 3e-25
Identities = 67/217 (30%), Positives = 125/217 (56%), Gaps = 4/217 (1%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLE--VKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M +E+ + K + FK +L V +G + LGP+G GKTTT+ + G+ PD G+V
Sbjct: 1 MYAIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDV 60
Query: 59 LFDGRDVTFLPPYSRN-IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
G D+ P ++ +GF+ ++ ++ + ++N+ F ++ ++E E+++ E+L+
Sbjct: 61 RILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLK 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
LVGL R + S G +QR+ LA+AL+ +PE+L+LDEP S LD + ++ +I R
Sbjct: 121 LVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVK-DIIRE 179
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVG 214
Q++ G T + +H E ++D++ ++ G++ VG
Sbjct: 180 QRKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVG 216
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 116 bits (289), Expect = 3e-25
Identities = 83/277 (29%), Positives = 141/277 (49%), Gaps = 19/277 (6%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTF-LPPYSRNIGFV 78
+ VK GEL +LGP+G GKTTT++I+ L P G G D+ + I V
Sbjct: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
Query: 79 FQ-DYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQ 137
+ + L+ + ++N+ + + +P+K E ++R +L +VGL ++ + S G +
Sbjct: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
Query: 138 QRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMA 197
QR+A+A+AL+ +PEVL LDEP LD + +R IK++ +E T + TH EA
Sbjct: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
Query: 198 ISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTN-------GVACLG 250
+ DRIA+++ GRI + P E + K + ++++R N G+A +
Sbjct: 213 LCDRIAIIDHGRIIALDTP---------EGLKKLVRKDTIVEVRVKNYNGENPFGLAKIK 263
Query: 251 ELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEI 287
E V + GP+ P+ VE + A+V+ E+
Sbjct: 264 EEGEKVVLRGPLDEEDIPKLVEFLVKN-NAKVLSVEV 299
>gb|AAC69841.1| (AF076683) oligopeptide transporter putative ATPase domain
[Staphylococcus aureus]
Length = 251
Score = 115 bits (284), Expect = 1e-24
Identities = 74/227 (32%), Positives = 126/227 (54%), Gaps = 16/227 (7%)
Query: 1 MVRVELRGVEKKFPG---FKLR-------VDLEVKDGELISILGPSGCGKTTTLRIIAGL 50
M ++++ VEK + FK R V E G I+I+G SG GK+T R+I G+
Sbjct: 1 MYMIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGI 60
Query: 51 ERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDY--ALFPHMNVFKNVAFGL--EVRKLPRK 106
E+PDKG V + + + IG VFQDY +L P V + + F + + P+
Sbjct: 61 EKPDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTV-REILFEVMCQCDGQPKD 119
Query: 107 EIERKVREVLELVGL-KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAK 165
+E + +LE VGL K + ++ P LSGG+ QRVA+ARA+ I P+ +L DE +S+LD
Sbjct: 120 VMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMS 179
Query: 166 VRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQ 212
++ + + +++ ++ +++THD + A + D++ + G+IE+
Sbjct: 180 IQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEE 226
>pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) PAB0303 -
Pyrococcus abyssi (strain Orsay)
>gi|5457885|emb|CAB49375.1| (AJ248284) ribose ABC
transporter, ATP-binding protein (rbsA) [Pyrococcus
abyssi]
Length = 498
Score = 115 bits (284), Expect = 1e-24
Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 9/218 (4%)
Query: 1 MVRVELRGVEKKFPG--FKLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M VE+ G+ K +P LR V+L+V++GE+ +LG +G GK+T +RI+ G +P KG
Sbjct: 1 MTAVEMSGIVKVYPDGVVALRGVNLKVEEGEIHGLLGENGAGKSTLMRILYGEIKPTKGE 60
Query: 58 VLFDGRDVTFLPPYS---RNIGFVFQDYALFPHMNVFKNVAFG-LEVRK-LPRKEIERKV 112
+ G++V+F P+ I V+Q + L P V +N+ L + + ++E+
Sbjct: 61 IKVFGKEVSFNGPWDAIREGIAMVYQHFTLVPTFTVLENLYLAMLSINPGIKISDVEKLA 120
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
+E + VG + N + E L G QQRV + +AL++ ++L+LDEP S L + L
Sbjct: 121 KEKMREVGFEVPLNEIVEDLPVGIQQRVEIIKALMLNAKILILDEPTSVLTPIEVKELFK 180
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
++ + KE GIT +++TH +E I+DR+ V+ G +
Sbjct: 181 TLRNL-KERGITVIFITHKLKEVKEITDRVTVLRRGEV 217
Score = 94.4 bits (231), Expect = 2e-18
Identities = 67/218 (30%), Positives = 109/218 (49%), Gaps = 28/218 (12%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLP---------- 69
V E+++GE++ I G G G+ +AG+ P+KG + G+DVT LP
Sbjct: 275 VSFELREGEILGIAGVQGNGQRELAEALAGIRIPEKGKIELLGKDVTKLPAHERYKSGLA 334
Query: 70 --PYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEI-----ERKVREVLELVGLK 122
P SR +G V MNV +NV R L + I EV+E +
Sbjct: 335 YVPDSRRVGLVLD-------MNVVENVVLTNLSRVLHKGRISWDKANEMTNEVVEKFEVL 387
Query: 123 GFENRMP-EQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE- 180
+ P + LSGG QQ+V + R ++ EP+V+++ EP LD E +R + +++ E
Sbjct: 388 LSSTKAPIKHLSGGNQQKVMVGREIIREPKVIVVSEPTQGLDIGATEFIRKTLLKLRDER 447
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLE 218
GI + ++ D +E + +SDR+AV+ G+I +G+ E
Sbjct: 448 KGI--LLISTDLDEILQLSDRVAVIYEGKIMSIGKTEE 483
>pir||A72282 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981772|gb|AAD36294.1|AE001778_15 (AE001778)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 315
Score = 114 bits (282), Expect = 2e-24
Identities = 81/245 (33%), Positives = 132/245 (53%), Gaps = 25/245 (10%)
Query: 1 MVRVELRGVEKKFP-GF----KLR----VDLEVKDGELISILGPSGCGKTTTLRIIAGLE 51
M ++++ + K+FP GF +L+ V E++ ++S++G SG GKTT ++I L
Sbjct: 1 MSLLKVQNLTKEFPLGFFGKERLKAVDDVSFEIERSRIVSLIGESGSGKTTVGKLILKLI 60
Query: 52 RPDKGNVLFDGRDVT-----FLPPYSRNIGFVFQDYALFPHMN-VFK-----NVAFGLEV 100
RP G +L +GRD+T L Y R + VFQD F N ++K ++ F
Sbjct: 61 RPSSGQILLNGRDITQIKGRELREYYRKVQGVFQD--PFSSFNPIYKIDRVLDMVFEEFF 118
Query: 101 RKLPRKEIERKVREVLELVGLKGFE--NRMPEQLSGGQQQRVALARALVIEPEVLLLDEP 158
P E K+ EV+ VG+ E + P QLSGGQ QR+ +AR L++ E+L+ DE
Sbjct: 119 PDTPASERRTKMEEVIASVGMNPREILGKYPHQLSGGQLQRILIARTLLLNVELLIADEI 178
Query: 159 LSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLE 218
+S LDA R + + + +E G++ +++THD ISD +M G I ++G +
Sbjct: 179 ISMLDASTRVDI-LNLLGDLRERGMSVIFITHDLSLGYYISDETFIMYRGNIVEMGDTEK 237
Query: 219 LYYNP 223
+++NP
Sbjct: 238 VFHNP 242
>pir||D71179 probable sugar ABC transporter - Pyrococcus horikoshii
>gi|3258144|dbj|BAA30827.1| (AP000007) 498aa long
hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 498
Score = 111 bits (274), Expect = 1e-23
Identities = 71/227 (31%), Positives = 121/227 (53%), Gaps = 9/227 (3%)
Query: 1 MVRVELRGVEKKFPGFKLR---VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
M+ VE+R + K +P + VD V++GE+ +LG +G GK+T +RI+ G +P KG
Sbjct: 1 MLAVEMRRIYKVYPDGVVALKGVDFTVEEGEIHGLLGENGAGKSTLMRILYGEIKPTKGE 60
Query: 58 VLFDGRDVTFLPPYS---RNIGFVFQDYALFPHMNVFKNVAFGLEV--RKLPRKEIERKV 112
V G V F P+ + I V+Q + L P V +N+ + + E+ +
Sbjct: 61 VKVFGDKVEFNGPWDAIRKGIAMVYQHFTLIPTFTVLENLYLSMLTINPNITINEVRKLA 120
Query: 113 REVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRM 172
+E ++ +G + + E L G QQRV + +AL+ ++L+LDEP S L E L
Sbjct: 121 KEKMKDIGFSVPLDDVVEDLPIGIQQRVEIIKALMANAKILILDEPTSVLTPLEVEELFK 180
Query: 173 EIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
++++ KE GIT +++TH +E I+DR+ V+ G + V + E+
Sbjct: 181 TLRKL-KENGITVIFITHKLKEVKEITDRVTVLRRGEVVGVAKTKEV 226
Score = 91.7 bits (224), Expect = 1e-17
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLP---------- 69
V E+K+GE++ I G G G+ +AG+ R +KG + GRDVT L
Sbjct: 275 VSFELKEGEILGIAGVQGNGQKELAEALAGIRRIEKGRIELLGRDVTELSADKRYKAGLA 334
Query: 70 --PYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENR 127
P SR +G V D ++ ++ + N+ + R++ ++ + +E++E +
Sbjct: 335 YVPDSRKVGLVL-DMSVVENV-ILTNLPSVMRGRRISWEKANKIGKEIVERFDVLVSSLS 392
Query: 128 MP-EQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTM 186
P + LSGG QQ+V + R ++ EP+V+++ EP LD E +R + + ++ G +
Sbjct: 393 TPIKHLSGGNQQKVMVGREIIREPKVVIVSEPTQGLDIGATEFIRKTLVSL-RDQGKGIL 451
Query: 187 YVTHDQEEAMAISDRIAVMNFGRIEQVGR 215
++ D +E + +SDRIAVM G+I +G+
Sbjct: 452 LISTDLDEILQLSDRIAVMYEGKIMAIGK 480
>gb|AAF58271.1| (AE003815) Mdr50 gene product [Drosophila melanogaster]
Length = 1313
Score = 110 bits (273), Expect = 2e-23
Identities = 74/233 (31%), Positives = 130/233 (55%), Gaps = 20/233 (8%)
Query: 1 MVRVELRGVEKKFP-----GFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDK 55
+ +E + VE ++P +++L++ G+ ++++GPSGCGK+T ++++ P
Sbjct: 428 LTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQA 487
Query: 56 GNVLFDGRDVTFLPP--YSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVR 113
GN+LF+G ++ L IG V Q+ LF ++++N+ +G E R+EIE
Sbjct: 488 GNLLFNGTNLKDLDINWLRSRIGVVGQEPILFA-TSIYENIRYGRE--DATREEIEAAAA 544
Query: 114 EVLELVGLK----GFENRMPE---QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKV 166
+ +K G++ + E QLSGGQ+QR+A+ARAL+ +PE+LLLDE S LD
Sbjct: 545 AANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTAS 604
Query: 167 RESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
++ ++++ G TT+ V H + + +DRI V+N G + + G EL
Sbjct: 605 EAKVQAALEKV--SAGRTTIIVAH-RLSTVRRADRIVVINKGEVVESGTHQEL 654
Score = 96.0 bits (235), Expect = 6e-19
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 15/213 (7%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDV--TFLPPYSRNIGF 77
++L V G+ I+++GPSGCGK+T +++I D+G L D DV + +G
Sbjct: 1091 LELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGI 1150
Query: 78 VFQDYALFPHMNVFKNVAFGLEVRKLPRKEI-----ERKVREVLELVGLKGFENRMPE-- 130
V Q+ LF + +N+++G R + +EI + + E + + L G++ RM E
Sbjct: 1151 VSQEPILFDR-TIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPL-GYDTRMGEKG 1208
Query: 131 -QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVT 189
QLSGGQ+QR+A+ARAL+ P+++LLDE S LDA+ + ++ + + G TT+ +
Sbjct: 1209 AQLSGGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASE--GRTTISIA 1266
Query: 190 HDQEEAMAISDRIAVMNFGRIEQVGRPLELYYN 222
H + + SD I V G + + G +L N
Sbjct: 1267 H-RLSTVVHSDVIFVFENGLVCEAGDHKQLLAN 1298
>pir||E69098 phosphate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622862|gb|AAB86201.1| (AE000929) phosphate
transport system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 253
Score = 108 bits (266), Expect = 1e-22
Identities = 76/242 (31%), Positives = 126/242 (51%), Gaps = 23/242 (9%)
Query: 1 MVRVELRGVEKKFPGFKLRVDLEVK--DGELISILGPSGCGKTTTLR-------IIAGLE 51
M R+E+ + F + D+ +K + +++GPSGCGK+T +R +I+G
Sbjct: 4 MYRIEVEDLNVYFDEAHILKDINLKIPKNTVTALIGPSGCGKSTFIRTLNRMNDVISGFR 63
Query: 52 RPDKGNVLFDGRDV----TFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKE 107
+G+V DG+D+ + + +G VFQ FP ++F+NVA+GL V ++
Sbjct: 64 H--EGHVYLDGKDIYDPDMDVVELRKKVGMVFQKPNPFPK-SIFENVAYGLRVHGYDDRD 120
Query: 108 -IERKVREVLELVGL----KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNL 162
IE +V E L L K ++ LSGGQQQR+ +AR + IEPEV+L+DEP S L
Sbjct: 121 FIEERVEESLRAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAIEPEVILMDEPCSAL 180
Query: 163 DAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYN 222
D + I +++ + T + VTH+ ++A +S A G I + G +++
Sbjct: 181 DPISTTKIEDLIHKLKND--YTIIIVTHNMQQATRVSKYTAFFLHGEIVESGLTEQIFIE 238
Query: 223 PK 224
P+
Sbjct: 239 PR 240
>gb|AAA16186.1| (L07065) P-glycoprotein/multidrug resistance protein [Drosophila
melanogaster]
Length = 1283
Score = 106 bits (262), Expect = 4e-22
Identities = 74/234 (31%), Positives = 131/234 (55%), Gaps = 21/234 (8%)
Query: 1 MVRVELRGVEKKFP-----GFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDK 55
+ +E + VE ++P +++L++ G+ ++++GPSGCGK+T ++++ P
Sbjct: 397 LTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQA 456
Query: 56 GNVLFDGRDVTFLP-PYSR--NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
GN+LF+G ++ L + R IG V Q+ LF ++++N+ +G E R+EIE
Sbjct: 457 GNLLFNGTNLKDLDINWLRFLRIGVVGQEPILFA-TSIYENIRYGRE--DATREEIEAAR 513
Query: 113 REVLELVGLK----GFENRMPE---QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAK 165
+ +K G++ + E QLSGGQ+QR+A+ RAL+ +PE+LLLDE S LD
Sbjct: 514 AAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIRRALIRDPEILLLDEATSALDTA 573
Query: 166 VRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
++ ++++ G TT+ V H + + +DRI V+N G + + G EL
Sbjct: 574 SEAKVQAALEKV--SAGRTTIIVAH-RLSTVRRADRIVVINKGEVVESGTHQEL 624
Score = 96.7 bits (237), Expect = 3e-19
Identities = 71/228 (31%), Positives = 122/228 (53%), Gaps = 15/228 (6%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDV--TFLPPYSRNIGF 77
++L V G+ I+++GPSGCGK+T +++I D+G L D DV + +G
Sbjct: 1061 LELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGI 1120
Query: 78 VFQDYALFPHMNVFKNVAFGLEVRKLPRKEI-----ERKVREVLELVGLKGFENRMPE-- 130
V Q+ LF + +N+++G R + +EI + + E + + L G++ RM E
Sbjct: 1121 VSQEPILFDR-TIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPL-GYDTRMGEKG 1178
Query: 131 -QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVT 189
QLSGGQ+QR+A+ARAL+ P+++LLDE S LDA+ + ++ + + G TT+ +
Sbjct: 1179 AQLSGGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASE--GRTTISIA 1236
Query: 190 HDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
H + + SD I V G + + G +L N + L +G++
Sbjct: 1237 H-RLSTVVHSDVIFVFENGLVCEAGDHKQLLANRGLYYTLYKLQSGSM 1283
>pir||A47377 multidrug resistance protein Mdr50 - fruit fly (Drosophila
melanogaster)
Length = 1283
Score = 106 bits (262), Expect = 4e-22
Identities = 74/234 (31%), Positives = 131/234 (55%), Gaps = 21/234 (8%)
Query: 1 MVRVELRGVEKKFP-----GFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDK 55
+ +E + VE ++P +++L++ G+ ++++GPSGCGK+T ++++ P
Sbjct: 397 LTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQA 456
Query: 56 GNVLFDGRDVTFLP-PYSR--NIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKV 112
GN+LF+G ++ L + R IG V Q+ LF ++++N+ +G E R+EIE
Sbjct: 457 GNLLFNGTNLKDLDINWLRFLRIGVVGQEPILFA-TSIYENIRYGRE--DATREEIEAAR 513
Query: 113 REVLELVGLK----GFENRMPE---QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAK 165
+ +K G++ + E QLSGGQ+QR+A+ RAL+ +PE+LLLDE S LD
Sbjct: 514 AAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIRRALIRDPEILLLDEATSALDTA 573
Query: 166 VRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
++ ++++ G TT+ V H + + +DRI V+N G + + G EL
Sbjct: 574 SEAKVQAALEKV--SAGRTTIIVAH-RLSTVRRADRIVVINKGEVVESGTHQEL 624
Score = 96.3 bits (236), Expect = 4e-19
Identities = 71/228 (31%), Positives = 121/228 (52%), Gaps = 15/228 (6%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDV--TFLPPYSRNIGF 77
++L V G+ I+++GPSGCGK+T +++I D+G L D DV + +G
Sbjct: 1061 LELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGI 1120
Query: 78 VFQDYALFPHMNVFKNVAFGLEVRKLPRKEI-----ERKVREVLELVGLKGFENRMPE-- 130
V Q+ LF + +N+++G R + +EI + + E + + L G++ RM E
Sbjct: 1121 VSQEPILFDR-TIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPL-GYDTRMGEKG 1178
Query: 131 -QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVT 189
QLSGGQ+QR+A+ARAL+ P+++LLDE S LDA+ + ++ + + G TT+ +
Sbjct: 1179 AQLSGGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASE--GRTTISIA 1236
Query: 190 HDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
H + + SD I V G + + G +L N + L +G +
Sbjct: 1237 H-RLSTVVHSDVIFVFENGLVCEAGDHKQLLANRGLYYTLYKLQSGRM 1283
>gb|AAK42946.1| ABC transporter, ATP binding protein (branched chain amino acid)
[Sulfolobus solfataricus]
Length = 248
Score = 106 bits (261), Expect = 5e-22
Identities = 65/242 (26%), Positives = 127/242 (51%), Gaps = 21/242 (8%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++L V K F G K V LE+++ + ++GP+G GK+T + ++ G+ +PD G++
Sbjct: 1 MSLLKLDSVSKYFGGIKALDSVTLEIENSKFTLLIGPNGSGKSTLINVVTGIYKPDSGSI 60
Query: 59 LFDGRDVTFLPP---YSRNIGFVFQDYALFPHMNVFKNVAFGLE-------VRKL----- 103
+ R++T P Y I FQ+ +FP+++V NV G+ +R L
Sbjct: 61 FLEDRNITGKKPHELYKLGIVRTFQNPQIFPNLSVLDNVILGISPIKGESILRSLFKPIW 120
Query: 104 --PRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSN 161
+E+ K +L++V L +R +LSGGQ + + +AR+L+ P +L++DEPL+
Sbjct: 121 LREEEELAEKAYNILKIVKLDRLWDRPARELSGGQLKLLEIARSLMTRPRLLVMDEPLAG 180
Query: 162 LDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYY 221
++ ++ + + + +++++GI V H + +D + M G++ G ++
Sbjct: 181 VNPQLAKEILNILTDLKRDIGI--FVVEHRLDIVANYADYVYAMFMGKVIAKGSVNDVLN 238
Query: 222 NP 223
NP
Sbjct: 239 NP 240
>pir||D69180 ABC transporter - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621685|gb|AAB85111.1| (AE000842) ABC
transporter [Methanobacterium thermoautotrophicum]
Length = 250
Score = 105 bits (260), Expect = 7e-22
Identities = 79/241 (32%), Positives = 131/241 (53%), Gaps = 19/241 (7%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M+ +E+ + G ++ ++L+V GEL++++GP+G GKTT LR+I G +P +G V
Sbjct: 3 MLAIEMEDLSYCINGREILRNINLKVPMGELLAVIGPNGGGKTTLLRLITGQIKPTRGTV 62
Query: 59 LFDGRDVTFLPPYSRN-IGFVFQDYAL---FPHMNVFKNVAFGLEVR-KLPRKEIERKVR 113
R + P SR+ IG++ Q FP +N+ + V G R + P + +K
Sbjct: 63 ----RVLGMKPEDSRSRIGYLPQRSHFETDFP-INILQTVLIGTYRRFEAPTDDDRKKAL 117
Query: 114 EVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRME 173
L++VG+ + +R +LSGG+ QRV LARALV EP++LLLDEP +++D R S
Sbjct: 118 RALKMVGMLEYRDRKIGELSGGELQRVFLARALVREPDLLLLDEPTASVDPAFRGSFYRI 177
Query: 174 IKRIQKELGITTMYVTHDQEEAMAISDRIAVMN-----FGRIEQVGRPLELYYNPKTEFV 228
I ++ E+ T + V+HD D +A +N G +E+ + ++ Y E +
Sbjct: 178 IDELRDEM--TIVIVSHDIGTVARHVDSVACLNHRLFVHGTVEEALKCIDDAYGCPVELL 235
Query: 229 A 229
A
Sbjct: 236 A 236
>emb|CAA51349.1| (X72832) ABC transporter [Streptococcus equisimilis]
Length = 110
Score = 102 bits (253), Expect = 4e-21
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 1 MVRVELRGVEKKFPGFKLRV----DLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
MV + L + KK+P DL++KD E I +GPSGCGK+TTLR+IAGLE +G
Sbjct: 1 MVELNLNHIYKKYPNTTHYAVEDFDLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISEG 60
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRK 106
+ DG V P R+I VFQ+YAL+PHM V+ N+AFGL++RK ++
Sbjct: 61 ELKIDGEVVNDKSPKDRDIAMVFQNYALYPHMTVYDNMAFGLKLRKYKKR 110
>pir||C81187 ABC transporter, ATP-binding protein NMB0549 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225775|gb|AAF40978.1| (AE002410) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 644
Score = 102 bits (253), Expect = 4e-21
Identities = 71/222 (31%), Positives = 111/222 (49%), Gaps = 14/222 (6%)
Query: 1 MVRVELRGVEKKFPGFKLRV------DLEVKDGELISILGPSGCGKTTTLRIIAGLERPD 54
M +E + + + F + RV L ++ G+ ++I+G SG GK+T + I+ L+
Sbjct: 1 MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGSGKSTLMNILGCLDTAG 60
Query: 55 KGNVLFDGRDVTFLPPYS------RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEI 108
G+ DG + + P GF+FQ Y L + NVA KE
Sbjct: 61 SGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTARDNVALPAVYMGAGGKER 120
Query: 109 ERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRE 168
+ ++L+ +GL E P +LSGGQQQRV++ARAL+ E++ DEP LD +
Sbjct: 121 SARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMNGGEIIFADEPTGALDTASGK 180
Query: 169 SLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
++ MEI R E G T + VTHD + A A ++R+ + G I
Sbjct: 181 NV-MEIIRRLHEAGHTVIMVTHDPDIA-ANANRVIEIRDGEI 220
>gb|AAG19337.1| (AE005028) ribose ABC transporter ATP-binding; RbsA [Halobacterium
sp. NRC-1]
Length = 506
Score = 102 bits (253), Expect = 4e-21
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 1 MVRVELRGVEKKFPGFKLRVD--LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M + L G+ K+FPG D L V++G + ++LG +G GKTT + ++ GL PD+G V
Sbjct: 1 MTSISLSGITKRFPGVVANDDVTLTVEEGTVHALLGENGAGKTTLMNVLYGLYEPDEGTV 60
Query: 59 LFDGRDVTFLPP---YSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVRE- 114
DG + F P IG + Q + L M V +NV G E RK ++R+
Sbjct: 61 SVDGTERAFDSPRDAIDAGIGMIHQHFMLVDSMTVAENVVLGNEPRKWRGLRVDREAARA 120
Query: 115 -VLELVGLKGFE---NRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESL 170
V +L GF+ +S G QQRV + +AL +VL+LDEP + L + + L
Sbjct: 121 AVDDLCDRYGFDVDPTARVADVSVGVQQRVEILKALYRGADVLILDEPTAVLTPQEVDDL 180
Query: 171 RMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGR 209
+ + E G T +++TH EA+ +D + V+ G+
Sbjct: 181 FEVLGELTAE-GKTIIFITHKLGEALHAADDVTVLRDGK 218
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 102 bits (252), Expect = 6e-21
Identities = 64/221 (28%), Positives = 118/221 (52%), Gaps = 6/221 (2%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M+ + + V K++ RV V + +LGP+G GKTT ++I+ + RP +GNV
Sbjct: 1 MMGISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNV 60
Query: 59 LFDGRDVTFLPPYS-RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+G +V P + +G + + +P++ ++ + F +R + +++ +V+ V
Sbjct: 61 SINGFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVST 120
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
L + + NR ++ S G +QRV LA AL+ +P +++LDEP LD +R I ++
Sbjct: 121 LTHCRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKM 180
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLE 218
+KE I + TH EA ++D I +++ GR+ G P+E
Sbjct: 181 KKEKLI--VLSTHLISEAELLADYIGIIDHGRLMHFG-PVE 218
>pir||E83087 probable ATP-binding component of ABC transporter PA4461 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950697|gb|AAG07849.1|AE004860_5 (AE004860) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 241
Score = 101 bits (249), Expect = 1e-20
Identities = 63/216 (29%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Query: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
M ++ + + K + G ++ V + + G+++ +LGP+G GKTT +I GL + D+G V
Sbjct: 1 MATLKAQHLAKSYKGRQVVRDVSMSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGVV 60
Query: 59 LFDGRDVTFLPPYSR---NIGFVFQDYALFPHMNVFKNVAFGLEVRK-LPRKEIERKVRE 114
D ++VT LP + R IG++ Q+ ++F ++V N+ LE R L R + +
Sbjct: 61 RIDEQNVTHLPMHGRARAGIGYLPQEASIFRKLSVSDNIMAILETRSDLDRNGRKEALEG 120
Query: 115 VLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEI 174
+L+ + + + LSGG+++RV +ARAL P+ +LLDEP + +D ++ I
Sbjct: 121 LLQEFHIHHIRDNLGMSLSGGERRRVEIARALASAPKFILLDEPFAGVDPISVGDIKQII 180
Query: 175 KRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
+ K GI + H+ E + I + ++N G++
Sbjct: 181 HHL-KAKGIGILITDHNVRETLDICETAYIVNDGQL 215
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 101 bits (248), Expect = 2e-20
Identities = 96/325 (29%), Positives = 158/325 (48%), Gaps = 32/325 (9%)
Query: 4 VELRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+E+ + + + G VD V GE+ +LG +G GKTTT+R + + G V
Sbjct: 6 IEVEHLRQTYDGRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILPVHYGKVRI 65
Query: 61 DGRDVTF-LPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
G DV+ R IG V Q+ + F +V +N+ + +PR+ ++ ++ EVLE+
Sbjct: 66 LGMDVSENAEKIRRRIGVVLQNES-FDFASVERNLKVYGMLWDVPREVLKARIEEVLEVF 124
Query: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
L +LSGGQ++R+ +AR + + ++L LDEP LD +R S+ + R +
Sbjct: 125 DLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLDPIMRRSV-LNYIRDKA 183
Query: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
G+T +Y T EEA + DRIA+MN G+I G +L K+++ G+L
Sbjct: 184 RKGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDL----KSKY-------GDL-- 230
Query: 240 LRSTNGVACLGELCF-NVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLSV 298
T V GE+ + ++ P V F E + I + VE +ILP I + L
Sbjct: 231 --KTIHVVVSGEIDYEDLRAKFPEDVLFDNEEIRIVSKNVE------DILPDLIIY-LKT 281
Query: 299 QGKEIIAEDSLARYEEIPKKVYIKV 323
+G I + ++ E V++KV
Sbjct: 282 KGIRI---ERISVEESSLDDVFLKV 303
>emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 866
Score = 100 bits (247), Expect = 2e-20
Identities = 84/292 (28%), Positives = 138/292 (46%), Gaps = 17/292 (5%)
Query: 2 VRVELRGVEKKFPGFKLR-----VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKG 56
V +++ G+ K++ G R + V+ G+++ +LGP+G GKTTTLR++ GL +PD G
Sbjct: 563 VPLQITGLSKRYAGSAERYAVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIKPDDG 622
Query: 57 NVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVL 116
+ G + P +G + PH++ +N+ L R R + E L
Sbjct: 623 EIRVFGHAIRPGAPVLSRVGAFVEGAGFLPHLSGRENLE--LYWRATGRPPENAHLDEAL 680
Query: 117 ELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLD-AKVRESLRMEIK 175
E+ GL R S G +QR+A+A+A++ P++L+LDEP + LD ++RE + I+
Sbjct: 681 EIAGLGDALARAVRTYSQGMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIR 740
Query: 176 RIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG 235
G T + +H E + VM+ GR+ Q G E+ + T V GTG
Sbjct: 741 --YAAAGRTVIVSSHLLAEVEQSCTHLVVMDRGRLVQAGPVAEIIGSGDTLLV----GTG 794
Query: 236 NLLKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEI 287
+ + VA L + V D + V P G+ AE++ EI
Sbjct: 795 LPVDEPLVDKVAALPGVASVVHTDDGLLVRLDPGGT---APGLVAELVRLEI 843
>sp|P21449|MDR2_CRIGR MULTIDRUG RESISTANCE PROTEIN 2 (P-GLYCOPROTEIN 2)
>gi|191167|gb|AAA68884.1| (M60041) p-glycoprotein isoform
II [Cricetulus griseus]
Length = 1276
Score = 100 bits (246), Expect = 3e-20
Identities = 66/213 (30%), Positives = 118/213 (54%), Gaps = 21/213 (9%)
Query: 20 VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPY--SRNIGF 77
+ LEVK G+ ++++G SGCGK+T ++++ P G V DG+++ L ++G
Sbjct: 1054 LSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVFLDGKEIKQLNVQWLRAHLGI 1113
Query: 78 VFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPE------- 130
V Q+ LF ++ +N+A+G R + + EIER +E + F +P+
Sbjct: 1114 VSQEPILFD-CSIAENIAYGDNSRVVSQDEIERAAKEA----NIHQFIESLPDKYNTRVG 1168
Query: 131 ----QLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTM 186
QLSGGQ+QR+A+ARALV +P +LLLDE S LD + + ++ + + ++ G T +
Sbjct: 1169 DKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE--GRTCI 1226
Query: 187 YVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
+ H + + +D I V+ G++++ G +L
Sbjct: 1227 VIAH-RLSTIQNADLIVVIQNGKVKEHGTHQQL 1258
Score = 99.1 bits (243), Expect = 6e-20
Identities = 80/239 (33%), Positives = 129/239 (53%), Gaps = 32/239 (13%)
Query: 1 MVRVELRGVEKKFP---GFKLR--VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDK 55
M +E + V +P G K+ ++L+V+ G+ ++++G SGCGK+TT++++ L P +
Sbjct: 388 MGNLEFKNVHFSYPSRSGIKILKGLNLKVQSGQTVALVGKSGCGKSTTVQLLQRLYDPTE 447
Query: 56 GNVLFDGRDV-TFLPPYSRNI-GFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVR 113
G V DG+D+ T Y R I G V Q+ LF + +N+ +G E + EIE+ V+
Sbjct: 448 GVVSIDGQDIRTINVRYLREIIGVVSQEPVLFA-TTIAENIRYGRE--NVTMDEIEKAVK 504
Query: 114 EVLE-------------LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLS 160
E LVG +G QLSGGQ+QR+A+ARALV P++LLLDE S
Sbjct: 505 EANAYDFIMKLPHKFDTLVGERG------AQLSGGQKQRIAIARALVRNPKILLLDEATS 558
Query: 161 NLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
LD + ++ + + ++ G TT+ + H + + +D IA + G I + G EL
Sbjct: 559 ALDTESEAVVQAALDKARE--GRTTIVIAH-RLSTVRNADVIAGFDGGVIVEQGNHEEL 614
>pir||C81916 probable ABC transporter ATP-binding protein NMA0729 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379451|emb|CAB84013.1| (AL162754) putative ABC
transporter ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 644
Score = 100 bits (246), Expect = 3e-20
Identities = 70/222 (31%), Positives = 109/222 (48%), Gaps = 14/222 (6%)
Query: 1 MVRVELRGVEKKFPGFKLRV------DLEVKDGELISILGPSGCGKTTTLRIIAGLERPD 54
M +E + + + F + RV L ++ G+ ++I+G SG GK+T + I+ L+
Sbjct: 1 MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGSGKSTLMNILGCLDTAG 60
Query: 55 KGNVLFDGRDVTFLPPYS------RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEI 108
G+ DG + + P GF+FQ Y L + NVA KE
Sbjct: 61 SGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTARDNVALPAVYMGAGGKER 120
Query: 109 ERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRE 168
+ ++L+ +GL E P +LSGGQQQRV++ARAL+ E++ DEP LD +
Sbjct: 121 SARADKLLQDLGLASKEGNKPSELSGGQQQRVSIARALMNGGEIIFADEPTGALDTASGK 180
Query: 169 SLRMEIKRIQKELGITTMYVTHDQEEAMAISDRIAVMNFGRI 210
++ MEI E G T + VTHD A A ++R+ + G I
Sbjct: 181 NV-MEIIHKLHEAGHTVIMVTHDPGIA-ANANRVIEIRDGEI 220
>gi|11497906 polysaccharide ABC transporter, ATP-binding protein (rfbB-2)
[Archaeoglobus fulgidus] >gi|7445635|pir||B69286
polysaccharide ABC transporter, ATP-binding protein
(rfbB-2) homolog - Archaeoglobus fulgidus
>gi|2650347|gb|AAB90943.1| (AE001085) polysaccharide ABC
transporter, ATP-binding protein (rfbB-2) [Archaeoglobus
fulgidus]
Length = 243
Score = 99.8 bits (245), Expect = 4e-20
Identities = 69/216 (31%), Positives = 105/216 (47%), Gaps = 37/216 (17%)
Query: 1 MVRVELRGVEKKFP-------------------GFKLR-------VDLEVKDGELISILG 34
M V++ GV KKF G K R V EV+ GE+ I+G
Sbjct: 1 MTAVKVEGVSKKFRIPVERADTLFERIVSAFSGGLKYREFWALKDVSFEVEKGEIFGIIG 60
Query: 35 PSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNV 94
P+G GKTT L IIAG+ PD G+V +G+ V L +G F P + V N+
Sbjct: 61 PNGGGKTTLLSIIAGIMHPDSGSVEVNGKVVPIL-----GLGVGFN-----PELPVRDNI 110
Query: 95 AFGLEVRKLPRKEIERKVREVLELVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLL 154
+ L R+EIERK E++E L+ F N + LS G + R+A A + P+VL+
Sbjct: 111 IIYGTIMGLKRQEIERKYEEIIEFAELEDFRNAKLKNLSSGMKARLAFATVINTNPDVLI 170
Query: 155 LDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTH 190
+DE L+ D ++ ++ + ++ G+T + V+H
Sbjct: 171 VDEVLAVGDVNFKKKCYKRLREMNED-GVTILLVSH 205
>gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melanogaster]
Length = 1463
Score = 96.7 bits (237), Expect = 3e-19
Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V++RG+ K F ++ V ++ +G++ ++G +G GKTT + ++AG P G L +
Sbjct: 339 VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALIN 398
Query: 62 GRDVTFLPPYS-RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
G D+ + R IG Q LF H++ ++ +R L E++ +V+ L+ +
Sbjct: 399 GFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLN 458
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L+ + LSGG Q+R+++A +L +VL+ DEP + LD R L I ++ +
Sbjct: 459 LQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLI--LEAK 516
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVG 214
G T + TH ++ + DR+ +++ G++ +G
Sbjct: 517 EGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIG 550
Score = 70.2 bits (169), Expect = 3e-11
Identities = 66/296 (22%), Positives = 128/296 (42%), Gaps = 28/296 (9%)
Query: 6 LRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDG 62
+ GV KK+ +L V+ +K + +LGP+G GKTTT ++I G DKGN+ G
Sbjct: 1052 VNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISG 1111
Query: 63 RDVTFLPPYS-RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
+ + + +G+ Q + F + + + L + P K++ ++ ++ + G
Sbjct: 1112 YSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGF 1171
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ ++ SGG ++++ A A ++ LDEP + +D R + I + ++
Sbjct: 1172 RKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDPASRRHVWTIINEVAQQ- 1229
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
G + +H+ +E A+ + ++ G I +G + V + G LK
Sbjct: 1230 GKAVLLTSHNMDEINALCSKSVILVDGSIYAMG---------SVQHVKNKIAKGMTLK-- 1278
Query: 242 STNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLS 297
L NV D V + + E +I AE+ + GR+ F++S
Sbjct: 1279 ----------LVVNVQPDNMVAMLTKIED-DIYMTYPNAELKEKYEFSGRLTFQIS 1323
>gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanogaster]
Length = 1981
Score = 96.7 bits (237), Expect = 3e-19
Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
Query: 4 VELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFD 61
V++RG+ K F ++ V ++ +G++ ++G +G GKTT + ++AG P G L +
Sbjct: 857 VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALIN 916
Query: 62 GRDVTFLPPYS-RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
G D+ + R IG Q LF H++ ++ +R L E++ +V+ L+ +
Sbjct: 917 GFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLN 976
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L+ + LSGG Q+R+++A +L +VL+ DEP + LD R L I ++ +
Sbjct: 977 LQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLI--LEAK 1034
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVG 214
G T + TH ++ + DR+ +++ G++ +G
Sbjct: 1035 EGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIG 1068
Score = 70.2 bits (169), Expect = 3e-11
Identities = 66/296 (22%), Positives = 128/296 (42%), Gaps = 28/296 (9%)
Query: 6 LRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLFDG 62
+ GV KK+ +L V+ +K + +LGP+G GKTTT ++I G DKGN+ G
Sbjct: 1570 VNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISG 1629
Query: 63 RDVTFLPPYS-RNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVGL 121
+ + + +G+ Q + F + + + L + P K++ ++ ++ + G
Sbjct: 1630 YSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGF 1689
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
+ ++ SGG ++++ A A ++ LDEP + +D R + I + ++
Sbjct: 1690 RKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDPASRRHVWTIINEVAQQ- 1747
Query: 182 GITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLR 241
G + +H+ +E A+ + ++ G I +G + V + G LK
Sbjct: 1748 GKAVLLTSHNMDEINALCSKSVILVDGSIYAMG---------SVQHVKNKIAKGMTLK-- 1796
Query: 242 STNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPGRIRFRLS 297
L NV D V + + E +I AE+ + GR+ F++S
Sbjct: 1797 ----------LVVNVQPDNMVAMLTKIED-DIYMTYPNAELKEKYEFSGRLTFQIS 1841
>emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 96.0 bits (235), Expect = 6e-19
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 35/301 (11%)
Query: 4 VELRGVEKKFPGFKLRVD---LEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVLF 60
+EL G+ K++ G K+ V+ V+ G + LGP+G GK+TT+R++ GL+RP G+V
Sbjct: 18 IELEGLTKRY-GEKVAVNNLSFTVRPGIITGFLGPNGAGKSTTMRMVLGLDRPTAGDVRI 76
Query: 61 DGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELVG 120
DG+ L IG + + A + + ++ + +P +VR+VL+ VG
Sbjct: 77 DGKHYDELKDPLTYIGALLEAKAWHGGRSAYNHLLCLAQSNGIPAS----RVRQVLDTVG 132
Query: 121 LKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKE 180
L + + S G QR+ +A AL+ +P +L+ DEP++ LD + +R +K + +
Sbjct: 133 LSAVARKKTKGFSLGMGQRLGIAGALLGDPRILMFDEPVNGLDPEGIHWIRNLMKTLASQ 192
Query: 181 LGITTMYVTHDQEEAMAISDRIAVMNFGR----------IEQVGRPLELYYNPKTEFVAK 230
G T +H E +D + V+ GR I + R P+ E +
Sbjct: 193 -GRTVFVSSHLMSEMALTADHLVVIGQGRLLADTSMAEFIAENSRSYVRIRTPQREQLLD 251
Query: 231 FLGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVEAEVMDYEILPG 290
L + + S GV + VDG +S +G+ +V+ YE+ P
Sbjct: 252 ALHAAGVTVVESGEGV---------LEVDG-------DKSETVGELAARHQVVLYELSPQ 295
Query: 291 R 291
R
Sbjct: 296 R 296
>gi|8051575 ATP-binding cassette sub-family G member 1 isoform b; ATP-binding
cassette 8 (homolog of Drosophila white); ABC
transporter 8; white protein homolog (ATP-binding
cassette transporter 8) [Homo sapiens]
>gi|1160186|emb|CAA62631.1| (X91249) white [Homo
sapiens]
Length = 674
Score = 90.1 bits (220), Expect = 3e-17
Identities = 94/350 (26%), Positives = 156/350 (43%), Gaps = 54/350 (15%)
Query: 6 LRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGL-ERPDKGNVLFDG-- 62
L+G+ KF GEL++I+GPSG GK+T + I+AG E KG VL +G
Sbjct: 97 LKGISGKF-----------NSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGLP 145
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK-VREVLELVGL 121
RD+ S ++ QD L PH+ V + + ++ + E R+ V+E+L +GL
Sbjct: 146 RDLRCFRKVSC---YIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGL 202
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
N LSGGQ++R+A+A LV P V+ DEP S LD+ + ++ + K L
Sbjct: 203 LSCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDS----ASCFQVVSLMKGL 258
Query: 182 --GITTMYVTHDQEEA--MAISDRIAVMNFGR-------------IEQVGRPLELYYNPK 224
G ++ T Q A + D++ V++ G+ + +G Y+NP
Sbjct: 259 AQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHNPA 318
Query: 225 ---TEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFF--RPESVEIGKEGVE 279
E + G N +R+ C + ++G D V F RP
Sbjct: 319 DFVMEVASGEYGDQNSRLVRAVREGMCDSDHKRDLGGDAEVNPFLWHRPSE--------- 369
Query: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
EV + L G + S++G + L ++ + K+ ++ + R S+L
Sbjct: 370 -EVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVL 418
>pir||G02068 white homolog - human >gi|1314277|gb|AAC51098.1| (U34919) white
homolog [Homo sapiens]
Length = 638
Score = 90.1 bits (220), Expect = 3e-17
Identities = 94/350 (26%), Positives = 156/350 (43%), Gaps = 54/350 (15%)
Query: 6 LRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGL-ERPDKGNVLFDG-- 62
L+G+ KF GEL++I+GPSG GK+T + I+AG E KG VL +G
Sbjct: 61 LKGISGKF-----------NSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGLP 109
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK-VREVLELVGL 121
RD+ S ++ QD L PH+ V + + ++ + E R+ V+E+L +GL
Sbjct: 110 RDLRCFRKVSC---YIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGL 166
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
N LSGGQ++R+A+A LV P V+ DEP S LD+ + ++ + K L
Sbjct: 167 LSCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDS----ASCFQVVSLMKGL 222
Query: 182 --GITTMYVTHDQEEA--MAISDRIAVMNFGR-------------IEQVGRPLELYYNPK 224
G ++ T Q A + D++ V++ G+ + +G Y+NP
Sbjct: 223 AQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHNPA 282
Query: 225 ---TEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFF--RPESVEIGKEGVE 279
E + G N +R+ C + ++G D V F RP
Sbjct: 283 DFVMEVASGEYGDQNSRLVRAVREGMCDSDHKRDLGGDAEVNPFLWHRPSE--------- 333
Query: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
EV + L G + S++G + L ++ + K+ ++ + R S+L
Sbjct: 334 -EVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVL 382
>sp|P45844|WHIT_HUMAN WHITE PROTEIN HOMOLOG (ATP-BINDING CASSETTE TRANSPORTER 8)
>gi|7768742|dbj|BAA95530.1| (AP001746) white protein
homolog (ATP-binding cassette transporter 8) [Homo
sapiens] >gi|9665220|emb|CAC00730.1| (AJ289137)
ATP-binding cassette transporter, sub-family G member 1
[Homo sapiens]
Length = 674
Score = 90.1 bits (220), Expect = 3e-17
Identities = 94/350 (26%), Positives = 156/350 (43%), Gaps = 54/350 (15%)
Query: 6 LRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGL-ERPDKGNVLFDG-- 62
L+G+ KF GEL++I+GPSG GK+T + I+AG E KG VL +G
Sbjct: 97 LKGISGKF-----------NSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGLP 145
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK-VREVLELVGL 121
RD+ S ++ QD L PH+ V + + ++ + E R+ V+E+L +GL
Sbjct: 146 RDLRCFRKVSC---YIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGL 202
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
N LSGGQ++R+A+A LV P V+ DEP S LD+ + ++ + K L
Sbjct: 203 LSCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDS----ASCFQVVSLMKGL 258
Query: 182 --GITTMYVTHDQEEA--MAISDRIAVMNFGR-------------IEQVGRPLELYYNPK 224
G ++ T Q A + D++ V++ G+ + +G Y+NP
Sbjct: 259 AQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHNPA 318
Query: 225 ---TEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFF--RPESVEIGKEGVE 279
E + G N +R+ C + ++G D V F RP
Sbjct: 319 DFVMEVASGEYGDQNSRLVRAVREGMCDSDHKRDLGGDAEVNPFLWHRPSE--------- 369
Query: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
EV + L G + S++G + L ++ + K+ ++ + R S+L
Sbjct: 370 -EVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVL 418
>dbj|BAB13728.1| (AB038161) ABC transporter [Homo sapiens]
Length = 638
Score = 90.1 bits (220), Expect = 3e-17
Identities = 94/350 (26%), Positives = 156/350 (43%), Gaps = 54/350 (15%)
Query: 6 LRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGL-ERPDKGNVLFDG-- 62
L+G+ KF GEL++I+GPSG GK+T + I+AG E KG VL +G
Sbjct: 61 LKGISGKF-----------NSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGLP 109
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK-VREVLELVGL 121
RD+ S ++ QD L PH+ V + + ++ + E R+ V+E+L +GL
Sbjct: 110 RDLRCFRKVSC---YIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGL 166
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
N LSGGQ++R+A+A LV P V+ DEP S LD+ + ++ + K L
Sbjct: 167 LSCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDS----ASCFQVVSLMKGL 222
Query: 182 --GITTMYVTHDQEEA--MAISDRIAVMNFGR-------------IEQVGRPLELYYNPK 224
G ++ T Q A + D++ V++ G+ + +G Y+NP
Sbjct: 223 AQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHNPA 282
Query: 225 ---TEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFF--RPESVEIGKEGVE 279
E + G N +R+ C + ++G D V F RP
Sbjct: 283 DFVMEVASGEYGDQNSRLVRAVREGMCDSDHKRDLGGDAEVNPFLWHRPSE--------- 333
Query: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
EV + L G + S++G + L ++ + K+ ++ + R S+L
Sbjct: 334 -EVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVL 382
>gi|11423559 ATP-binding cassette sub-family G member 1 isoform a [Homo sapiens]
Length = 656
Score = 90.1 bits (220), Expect = 3e-17
Identities = 94/350 (26%), Positives = 156/350 (43%), Gaps = 54/350 (15%)
Query: 6 LRGVEKKFPGFKLRVDLEVKDGELISILGPSGCGKTTTLRIIAGL-ERPDKGNVLFDG-- 62
L+G+ KF GEL++I+GPSG GK+T + I+AG E KG VL +G
Sbjct: 79 LKGISGKF-----------NSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGLP 127
Query: 63 RDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERK-VREVLELVGL 121
RD+ S ++ QD L PH+ V + + ++ + E R+ V+E+L +GL
Sbjct: 128 RDLRCFRKVSC---YIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGL 184
Query: 122 KGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKEL 181
N LSGGQ++R+A+A LV P V+ DEP S LD+ + ++ + K L
Sbjct: 185 LSCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDS----ASCFQVVSLMKGL 240
Query: 182 --GITTMYVTHDQEEA--MAISDRIAVMNFGR-------------IEQVGRPLELYYNPK 224
G ++ T Q A + D++ V++ G+ + +G Y+NP
Sbjct: 241 AQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHNPA 300
Query: 225 ---TEFVAKFLGTGNLLKLRSTNGVACLGELCFNVGVDGPVKVFF--RPESVEIGKEGVE 279
E + G N +R+ C + ++G D V F RP
Sbjct: 301 DFVMEVASGEYGDQNSRLVRAVREGMCDSDHKRDLGGDAEVNPFLWHRPSE--------- 351
Query: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
EV + L G + S++G + L ++ + K+ ++ + R S+L
Sbjct: 352 -EVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVL 400
>pir||I76773 ATP binding component of ABC-transporter - Escherichia coli
>gi|598468|dbj|BAA07748.1| (D43637) putative ATP binding
component of ABC-transporter [Escherichia coli]
Length = 431
Score = 84.7 bits (206), Expect = 1e-15
Identities = 80/313 (25%), Positives = 133/313 (41%), Gaps = 37/313 (11%)
Query: 7 RGVEKKFPGFKLR---------VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
R +EK PG K R ++ ++ GE + I+G +G GK+T L+++ G +P KG+
Sbjct: 21 RVIEKLLPGDKPRHSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGS 80
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ GR L +G F P +NV + L R+EIER + E+
Sbjct: 81 IEIQGRVAALL-----ELGMGFH-----PDFTGRQNVYMSGLMMGLGREEIERLMPEIEA 130
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + S G Q R+A A A P++L++DE LS D++ + I
Sbjct: 131 FADIGDYIEEPVRIYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADF 190
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVA---KFLGT 234
KE G T + V+H + + DR + G I G ++ E K T
Sbjct: 191 -KEQGTTLLLVSHSAGDIVKHCDRAIFLKNGDICMDGTARDVTNRYLDELFGKPDKDSAT 249
Query: 235 GNLLKLRSTNGVACLGELCFNVGVDGPVKVF-----FRPESVEIGKEGVEAEVMDYEILP 289
+ + S +G + + +D V+ +RPE G+ G A+++DY I
Sbjct: 250 KSATAISSASGES-------QMSLDEIEDVYHTRPGYRPEEYRWGQGG--AKIIDYHIQS 300
Query: 290 GRIRFRLSVQGKE 302
+ F S+ G +
Sbjct: 301 AGVDFPPSLTGNQ 313
>dbj|BAA28332.1| (AB010293) ATP binding component of ABC-transporter [Escherichia
coli]
Length = 431
Score = 84.7 bits (206), Expect = 1e-15
Identities = 80/313 (25%), Positives = 133/313 (41%), Gaps = 37/313 (11%)
Query: 7 RGVEKKFPGFKLR---------VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
R +EK PG K R ++ ++ GE + I+G +G GK+T L+++ G +P KG+
Sbjct: 21 RVIEKLLPGDKPRHSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGS 80
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ GR L +G F P +NV + L R+EIER + E+
Sbjct: 81 IEIQGRVAALL-----ELGMGFH-----PDFTGRQNVYMSGLMMGLGREEIERLMPEIEA 130
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + S G Q R+A A A P++L++DE LS D++ + I
Sbjct: 131 FADIGDYIEEPVRIYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADF 190
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVA---KFLGT 234
KE G T + V+H + + DR + G I G ++ E K T
Sbjct: 191 -KEQGTTLLLVSHSAGDIVKHCDRAIFLKNGDICMDGTARDVTNRYLDELFGKPDKDSAT 249
Query: 235 GNLLKLRSTNGVACLGELCFNVGVDGPVKVF-----FRPESVEIGKEGVEAEVMDYEILP 289
+ + S +G + + +D V+ +RPE G+ G A+++DY I
Sbjct: 250 KSATAISSASGES-------QMSLDEIEDVYHTRPGYRPEEYRWGQGG--AKIIDYHIQS 300
Query: 290 GRIRFRLSVQGKE 302
+ F S+ G +
Sbjct: 301 AGVDFPPSLTGNQ 313
>dbj|BAA28340.1| (AB010295) ATP binding component of ABC-transporter [Klebsiella
pneumoniae] >gi|3142235|dbj|BAA28344.1| (AB010296) ATP
binding component of ABC-transporter [Klebsiella
pneumoniae]
Length = 431
Score = 84.7 bits (206), Expect = 1e-15
Identities = 79/313 (25%), Positives = 134/313 (42%), Gaps = 37/313 (11%)
Query: 7 RGVEKKFPGFKLR---------VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
R +EK PG K R ++ ++ GE + I+G +G GK+T L+++ G +P KG+
Sbjct: 21 RVIEKLLPGDKPRHSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGS 80
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ GR L +G F P +NV + L R+EIER + E+
Sbjct: 81 IEIQGRVAALL-----ELGMGFH-----PDFTGRQNVYMSGLMMGLGREEIERLMPEIEA 130
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + S G Q R+A A A P++L++DE LS D++ + I
Sbjct: 131 FADIGDYIEEPVRIYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADF 190
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVA---KFLGT 234
+K+ G T + V+H + + DR + G I G ++ E K T
Sbjct: 191 KKQ-GTTLLLVSHSAGDIVKHCDRAIFLKNGDICMDGTARDVTNRYLDELFGKPDKDSAT 249
Query: 235 GNLLKLRSTNGVACLGELCFNVGVDGPVKVF-----FRPESVEIGKEGVEAEVMDYEILP 289
+ + S +G + + +D V+ +RPE G+ G A+++DY I
Sbjct: 250 KSATAISSASGES-------QMSLDEIEDVYHTRPGYRPEEYRWGQGG--AKIIDYHIQS 300
Query: 290 GRIRFRLSVQGKE 302
+ F S+ G +
Sbjct: 301 AGVDFPPSLTGNQ 313
>sp|P25371|ADP1_YEAST PROBABLE ATP-DEPENDENT PERMEASE PRECURSOR >gi|83202|pir||S19421
ATP-dependent permease ADP1 precursor - yeast
(Saccharomyces cerevisiae) >gi|1907154|emb|CAA42328.1|
(X59720) YCR011c, len:1049 [Saccharomyces cerevisiae]
Length = 1049
Score = 84.3 bits (205), Expect = 2e-15
Identities = 74/265 (27%), Positives = 125/265 (46%), Gaps = 23/265 (8%)
Query: 24 VKDGELISILGPSGCGKTTTLRIIAGLERPD--KGNVLFDGRDVTFLPPYSRNIGFVFQD 81
VK G++++I+G SG GKTT L I+A + G++ +G + +S+ IGFV QD
Sbjct: 413 VKPGQILAIMGGSGAGKTTLLDILAMKRKTGHVSGSIKVNGISMD-RKSFSKIIGFVDQD 471
Query: 82 YALFPHMNVFKNVAFGLEVRKLPR-------KEIERKVREVLELVGLKG--FENRMPEQL 132
L P + VF+ V +R LP+ K KV E L ++ +K N +
Sbjct: 472 DFLLPTLTVFETVLNSALLR-LPKALSFEAKKARVYKVLEELRIIDIKDRIIGNEFDRGI 530
Query: 133 SGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHD- 191
SGG+++RV++A LV P VL LDEP S LDA ++ + R+ + T + H
Sbjct: 531 SGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSDYNRTLVLSIHQP 590
Query: 192 QEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGE 251
+ + D++ +++ G E+ Y+ + V++FL + + N L +
Sbjct: 591 RSNIFYLFDKLVLLSKG---------EMVYSGNAKKVSEFLRNEGYICPDNYNIADYLID 641
Query: 252 LCFNVGVDGPVKVFFRPESVEIGKE 276
+ F G G + +E G +
Sbjct: 642 ITFEAGPQGKRRRIRNISDLEAGTD 666
>dbj|BAA28336.1| (AB010294) ATP binding component of ABC-transporter [Escherichia
coli]
Length = 431
Score = 84.3 bits (205), Expect = 2e-15
Identities = 80/310 (25%), Positives = 132/310 (41%), Gaps = 31/310 (10%)
Query: 7 RGVEKKFPGFKLR---------VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGN 57
R +EK PG K R ++ ++ GE + I+G +G GK+T L+++ G +P KG+
Sbjct: 21 RVIEKLLPGDKPRHSKKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTTQPTKGS 80
Query: 58 VLFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
+ GR L +G F P +NV + L R+EIE + E+
Sbjct: 81 IEIQGRVAALL-----ELGMGFH-----PDFTGRQNVYMSGLMMGLSREEIECLMPEIEA 130
Query: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
+ + S G Q R+A A A P++L++DE LS D++ + I
Sbjct: 131 FADIGDYIEEPVRVYSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARIADF 190
Query: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNL 237
+K+ G T + V+H + + DR + G I G ++ E K N
Sbjct: 191 KKQ-GTTLLLVSHSAGDIVKHCDRAIFLKNGDICMDGTARDVTNRYLDELFGK--TDKNS 247
Query: 238 LKLRSTNGVACLGELCFNVGVDGPVKVF-----FRPESVEIGKEGVEAEVMDYEILPGRI 292
T ++ GE + +D V+ +RPE G+ G A+++DY I I
Sbjct: 248 TPKSETATLSVSGE--SQMSLDEIEDVYHTRPGYRPEEYRWGQGG--AKIIDYHIQSAGI 303
Query: 293 RFRLSVQGKE 302
F S+ G +
Sbjct: 304 NFPPSLTGNQ 313
>gi|10383780 Active transport ATPase; Adp1p [Saccharomyces cerevisiae]
Length = 1049
Score = 84.3 bits (205), Expect = 2e-15
Identities = 74/265 (27%), Positives = 125/265 (46%), Gaps = 23/265 (8%)
Query: 24 VKDGELISILGPSGCGKTTTLRIIAGLERPD--KGNVLFDGRDVTFLPPYSRNIGFVFQD 81
VK G++++I+G SG GKTT L I+A + G++ +G + +S+ IGFV QD
Sbjct: 413 VKPGQILAIMGGSGAGKTTLLDILAMKRKTGHVSGSIKVNGISMD-RKSFSKIIGFVDQD 471
Query: 82 YALFPHMNVFKNVAFGLEVRKLPR-------KEIERKVREVLELVGLKG--FENRMPEQL 132
L P + VF+ V +R LP+ K KV E L ++ +K N +
Sbjct: 472 DFLLPTLTVFETVLNSALLR-LPKALSFEAKKARVYKVLEELRIIDIKDRIIGNEFDRGI 530
Query: 133 SGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHD- 191
SGG+++RV++A LV P VL LDEP S LDA ++ + R+ + T + H
Sbjct: 531 SGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSDYNRTLVLSIHQP 590
Query: 192 QEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACLGE 251
+ + D++ +++ G E+ Y+ + V++FL + + N L +
Sbjct: 591 RSNIFYLFDKLVLLSKG---------EMVYSGNAKKVSEFLRNEGYICPDNYNIADYLID 641
Query: 252 LCFNVGVDGPVKVFFRPESVEIGKE 276
+ F G G + +E G +
Sbjct: 642 ITFEAGPQGKRRRIRNISDLEAGTD 666
>pir||C72615 probable transport ATP-binding protein APE1380 - Aeropyrum pernix
(strain K1) >gi|5105063|dbj|BAA80377.1| (AP000061) 316aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 316
Score = 80.8 bits (196), Expect = 2e-14
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 34/273 (12%)
Query: 29 LISILGPSGCGKTTTLRIIAGLERPDKGNVLFDGRDVTFLPPYSR---NIGFVFQDYALF 85
++ +LGP+G GKTT L+ I GL +P G +L +G + P + + IG+V +
Sbjct: 35 ILGVLGPNGAGKTTLLKTILGLVKPSAGEILVEGVNPRS-PGFEKLLPRIGYVPE----L 89
Query: 86 PHMNVFKNVAFGLEVRKLPRKE----IERKVR--EVLELVGLKGFENRMPEQLSGGQQQR 139
P + ++ LE L R E +E +VR E LE+VGL G +LS G ++R
Sbjct: 90 PVVPLWTTPCILLET--LARLEGYTSVEARVRAREALEVVGLAGECETPIGKLSKGARKR 147
Query: 140 VALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQKELGITTMYVTHDQEEAMAIS 199
V +A+A + E E+L+LDEP S LD + +R ++ + +E G T + +H E I+
Sbjct: 148 VLVAQAFIGERELLVLDEPYSGLDPEWVYRVRELLRTVARE-GATVIVSSHILRELEDIA 206
Query: 200 DRIAVMN-----FGRIEQV-----GRPLELYYNPKTEFVAKFLGTGNLLKLRSTNGVACL 249
+ V+ +G IE++ G P + + E + L G G
Sbjct: 207 THVLVLKTDQLFYGSIEELRAWLSGTPRIILSVAEPERAVEVLRRGGFNAYTINKG---- 262
Query: 250 GELCFNV-GVDGPVKV--FFRPESVEIGKEGVE 279
G+L V G D P +V E++EI + VE
Sbjct: 263 GQLVVAVEGADDPARVLSLLLAENIEISEYRVE 295
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.143 0.402
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117646694
Number of Sequences: 2977
Number of extensions: 4894656
Number of successful extensions: 23378
Number of sequences better than 1.0e-10: 2258
Number of HSP's better than 0.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 1559
Number of HSP's that attempted gapping in prelim test: 18754
Number of HSP's gapped (non-prelim): 2714
length of query: 329
length of database: 189,106,746
effective HSP length: 55
effective length of query: 274
effective length of database: 156,189,961
effective search space: 42796049314
effective search space used: 42796049314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)