BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0558 (obg-like) DE:GTP-BINDING PROTEIN, GTP1/OBG FAMILY
(357 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75128 GTP-binding protein, gtp1/obg family PAB0558 - Pyroc... 707 0.0
pir||B71003 hypothetical protein PH1320 - Pyrococcus horikoshii ... 641 0.0
gb|AAB99416.1| (U67581) GTP-binding protein, member of GTP1/OBG-... 325 4e-88
pir||G64475 GTP-binding protein, GTP1/OBG-family - Methanococcus... 325 4e-88
pir||E69214 GTP-binding protein, GTP1/OBG family - Methanobacter... 287 2e-76
gi|11498040 GTP-binding protein, GTP1/OBG-family [Archaeoglobus ... 253 3e-66
emb|CAC12070.1| (AL445066) GTP-binding protein related protein, ... 235 8e-61
gb|AAG20635.1| (AE005133) GTP-binding protein homolog; Gbp4 [Hal... 221 8e-57
gb|AAD55439.1|AF181654_1 (AF181654) BcDNA.LD23830 [Drosophila me... 208 8e-53
gi|6325164 (putative) nucleolar G-protein; homologs identified i... 205 5e-52
gi|6912532 GTP-binding protein [Homo sapiens] >gi|4191616|gb|AAD... 201 1e-50
dbj|BAA91752.1| (AK001552) unnamed protein product [Homo sapiens] 201 1e-50
gi|11430129 GTP-binding protein [Homo sapiens] 201 1e-50
pir||T32580 hypothetical protein T07A9.9 - Caenorhabditis elegan... 196 3e-49
gb|AAC24364.1| (AF065393) putative G-binding protein [Homo sapiens] 193 3e-48
gb|AAG29629.1|AC079284_10 (AC079284) GTP-binding protein, putati... 191 9e-48
gb|AAK40935.1| GTP-binding protein [Sulfolobus solfataricus] 189 4e-47
emb|CAB57676.1| (Y18930) probable GTP-binding protein [Sulfolobu... 189 4e-47
pir||T40600 gtp-binding protein - fission yeast (Schizosaccharom... 187 2e-46
gb|AAF01061.1|AF189284_1 (AF189284) nucleolar G-protein NOG1 [Tr... 180 2e-44
pir||G72747 hypothetical protein APE0510 - Aeropyrum pernix (str... 167 2e-40
gb|AAD32880.1|AC005489_18 (AC005489) F14N23.18 [Arabidopsis thal... 156 4e-37
gb|AAF14665.1|AC011713_13 (AC011713) EST gb|AI997445 comes from ... 123 3e-27
pir||E70477 GTP-binding protein obg - Aquifex aeolicus >gi|29842... 93 5e-18
pir||B72418 conserved hypothetical protein - Thermotoga maritima... 82 1e-14
pir||B75563 GTP-binding protein Obg - Deinococcus radiodurans (s... 80 3e-14
pir||A72397 thiophene oxidation protein ThdF-related GTPase - Th... 78 2e-13
sp|O67030|THDF_AQUAE POSSIBLE THIOPHENE AND FURAN OXIDATION PROT... 75 2e-12
sp|Q9WZV1|ERA_THEMA GTP-BINDING PROTEIN ERA HOMOLOG >gi|7438444|... 75 2e-12
gb|AAB81507.1| (AF019407) GTP-binding protein [Caulobacter cresc... 74 2e-12
pir||T42036 obg protein - Streptomyces coelicolor >gi|1783290|db... 73 5e-12
dbj|BAA13501.1| (D87916) Obg [Streptomyces griseus] 71 1e-11
gb|AAF52655.1| (AE003621) CG13390 gene product [Drosophila melan... 69 6e-11
dbj|BAA91783.1| (AK001603) unnamed protein product [Homo sapiens] 69 7e-11
sp|Q57986|FEOB_METJA FERROUS IRON TRANSPORT PROTEIN B HOMOLOG >g... 69 1e-10
>pir||B75128 GTP-binding protein, gtp1/obg family PAB0558 - Pyrococcus abyssi
(strain Orsay) >gi|5458250|emb|CAB49739.1| (AJ248285)
GTP-BINDING PROTEIN, GTP1/OBG FAMILY [Pyrococcus abyssi]
Length = 357
Score = 707 bits (1806), Expect = 0.0
Identities = 357/357 (100%), Positives = 357/357 (100%)
Query: 1 MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN 60
MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN
Sbjct: 1 MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN 60
Query: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK 120
LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK
Sbjct: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK 120
Query: 121 DPNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGK 180
DPNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGK
Sbjct: 121 DPNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGK 180
Query: 181 STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAI 240
STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAI
Sbjct: 181 STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAI 240
Query: 241 LALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRI 300
LALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRI
Sbjct: 241 LALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRI 300
Query: 301 VEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKIAKEKIEEELRRYRRPF 357
VEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKIAKEKIEEELRRYRRPF
Sbjct: 301 VEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKIAKEKIEEELRRYRRPF 357
>pir||B71003 hypothetical protein PH1320 - Pyrococcus horikoshii
>gi|3257743|dbj|BAA30426.1| (AP000006) 357aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 357
Score = 641 bits (1636), Expect = 0.0
Identities = 316/354 (89%), Positives = 340/354 (95%)
Query: 1 MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN 60
MRNPFERMPTVLTADELIDKAFRRAE+AAS+FKPRG+KVKKAR REELR+RTVSNVVRDN
Sbjct: 1 MRNPFERMPTVLTADELIDKAFRRAEKAASSFKPRGNKVKKARLREELRVRTVSNVVRDN 60
Query: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK 120
LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRI+RELEERYVERIRYS
Sbjct: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIIRELEERYVERIRYSN 120
Query: 121 DPNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGK 180
DPNE+AELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLE PTVVIAGHPNVGK
Sbjct: 121 DPNEIAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLEIPTVVIAGHPNVGK 180
Query: 181 STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAI 240
STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQ+IDTPGLLDRP+SERNEIEKQAI
Sbjct: 181 STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQIIDTPGLLDRPISERNEIEKQAI 240
Query: 241 LALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRI 300
LAL+YLGNLIIYIFDPSE+CGFPLEEQIHLF E++ EFKD+PFLVVINKIDVA+E+ I+
Sbjct: 241 LALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLPFLVVINKIDVADEENIKR 300
Query: 301 VEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKIAKEKIEEELRRYR 354
+E+ VKEKG+ +KISALKG G+D V+EEI KTLRPLAEK+A+EKIE ELRRYR
Sbjct: 301 LEKFVKEKGLNPIKISALKGTGIDLVKEEIIKTLRPLAEKVAREKIERELRRYR 354
>gb|AAB99416.1| (U67581) GTP-binding protein, member of GTP1/OBG-family
[Methanococcus jannaschii]
Length = 350
Score = 325 bits (825), Expect = 4e-88
Identities = 172/332 (51%), Positives = 236/332 (70%), Gaps = 8/332 (2%)
Query: 3 NPFERMPTVLTADELIDKAFRRAERAASAFKPRG-DKVKKARQREELRIRTVSNVVRDNL 61
NPF++MPT+L DEL+ KA RR E+ A+ + + + KAR EE ++RT+++VV DNL
Sbjct: 6 NPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASVVADNL 65
Query: 62 RKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKD 121
+KV+++TP + LPKFYQE+V+VLV D F K+M WA +VR+L Y +IR ++
Sbjct: 66 QKVIDKTPPVRKLPKFYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKIRKART 125
Query: 122 PNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKS 181
P + +LR++F GRV S+L I + ++ ARE LKDLP + PTVVIAG+PNVGKS
Sbjct: 126 PQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKLKDLPTFK-DLPTVVIAGYPNVGKS 184
Query: 182 TLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAIL 241
TLLK LT A EI SYPFTT+GINVG + Q++DTPGLLDRPL ERN+IE QAIL
Sbjct: 185 TLLKKLTGADVEINSYPFTTKGINVGYIGE----IQMVDTPGLLDRPLYERNDIELQAIL 240
Query: 242 ALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRIV 301
AL YL NLI++I D SE+CG+ +EEQI+L EI + FK P +V INKID+ +E++++ +
Sbjct: 241 ALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFK-APIVVAINKIDLVDEERVKEI 299
Query: 302 EELVKEKGI-KFLKISALKGEGVDKVREEITK 332
EE +KE GI + LKISA K G+D+++E + K
Sbjct: 300 EEKLKEVGIEEILKISADKDIGLDELKERLKK 331
>pir||G64475 GTP-binding protein, GTP1/OBG-family - Methanococcus jannaschii
Length = 354
Score = 325 bits (825), Expect = 4e-88
Identities = 172/332 (51%), Positives = 236/332 (70%), Gaps = 8/332 (2%)
Query: 3 NPFERMPTVLTADELIDKAFRRAERAASAFKPRG-DKVKKARQREELRIRTVSNVVRDNL 61
NPF++MPT+L DEL+ KA RR E+ A+ + + + KAR EE ++RT+++VV DNL
Sbjct: 10 NPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASVVADNL 69
Query: 62 RKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKD 121
+KV+++TP + LPKFYQE+V+VLV D F K+M WA +VR+L Y +IR ++
Sbjct: 70 QKVIDKTPPVRKLPKFYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKIRKART 129
Query: 122 PNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKS 181
P + +LR++F GRV S+L I + ++ ARE LKDLP + PTVVIAG+PNVGKS
Sbjct: 130 PQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKLKDLPTFK-DLPTVVIAGYPNVGKS 188
Query: 182 TLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAIL 241
TLLK LT A EI SYPFTT+GINVG + Q++DTPGLLDRPL ERN+IE QAIL
Sbjct: 189 TLLKKLTGADVEINSYPFTTKGINVGYIGE----IQMVDTPGLLDRPLYERNDIELQAIL 244
Query: 242 ALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRIV 301
AL YL NLI++I D SE+CG+ +EEQI+L EI + FK P +V INKID+ +E++++ +
Sbjct: 245 ALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFK-APIVVAINKIDLVDEERVKEI 303
Query: 302 EELVKEKGI-KFLKISALKGEGVDKVREEITK 332
EE +KE GI + LKISA K G+D+++E + K
Sbjct: 304 EEKLKEVGIEEILKISADKDIGLDELKERLKK 335
>pir||E69214 GTP-binding protein, GTP1/OBG family - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621950|gb|AAB85356.1| (AE000862) GTP-binding
protein, GTP1/OBG family [Methanobacterium
thermoautotrophicum]
Length = 336
Score = 287 bits (726), Expect = 2e-76
Identities = 158/345 (45%), Positives = 229/345 (65%), Gaps = 24/345 (6%)
Query: 8 MPTVLTADELIDKAFRRAERAASAFKPRGDKV---KKARQREELRIRTVSNVVRDNLRKV 64
+PTV T DEL+DK FRRA +AAS R K+ KKA+ E R++T V+RD L+ +
Sbjct: 3 IPTVPTTDELLDKGFRRARKAASL--KRSSKIPGQKKAKVIESTRVQTACQVIRDRLKMI 60
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
++R P + +LP+FYQ+ +DV V D K++ ++WA+ I+ +LE Y+ RI+ SK P++
Sbjct: 61 IQRIPDIESLPEFYQDYIDVTVGVDELKKSLGALNWAVGILNQLESDYMARIKRSK-PSD 119
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+ LRR+ +GR++SV++ I+ L +L+ A+ L+++P VDL+ TVVIAG PNVGKSTLL
Sbjct: 120 ASHLRREAFGRISSVIKRIEGDLDFLDFAKNKLRNMPTVDLDAFTVVIAGFPNVGKSTLL 179
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+ LT A+PE+A YPFTT+GI +G E + R QVIDTPGLLDRP+ + N IE QA++AL+
Sbjct: 180 RTLTGAEPEVADYPFTTKGIQIGHLERKWKRIQVIDTPGLLDRPVEDMNNIELQAMVALE 239
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAE-----EDKIR 299
+ ++I++IFD SE CG+ LE Q L+ I F D+P + V NK+D+AE E+ I
Sbjct: 240 NIADVIMFIFDASETCGYTLESQYSLYLGIRSVF-DIPVVTVFNKMDLAENVKYLEEYIN 298
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKIAKE 344
+VE+ LK+SA +G GV K I K L L EK +E
Sbjct: 299 MVEDP--------LKVSAFEGRGVSK----IIKKLEGLYEKETRE 331
>gi|11498040 GTP-binding protein, GTP1/OBG-family [Archaeoglobus fulgidus]
>gi|7446917|pir||D69303 GTP-binding protein,
GTP1/OBG-family homolog - Archaeoglobus fulgidus
>gi|2650203|gb|AAB90809.1| (AE001075) GTP-binding
protein, GTP1/OBG-family [Archaeoglobus fulgidus]
Length = 328
Score = 253 bits (639), Expect = 3e-66
Identities = 133/331 (40%), Positives = 211/331 (63%), Gaps = 28/331 (8%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++PTVLTA+ELIDK FRRA R + +++ ++ T+SNV RD K+
Sbjct: 4 FKKLPTVLTAEELIDKIFRRAARVEG---------RNPKEKALNKLATISNVSRDYFGKI 54
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
+ P LP FY+E+VDV+V K++ + WA +++++ R V ++ K+P+
Sbjct: 55 IGAHPSYENLPDFYREMVDVVVGIRQLKKSLVALKWADGMIQKVVSRAVREVKGGKNPSA 114
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+ + YGRVAS++ IDD LR+LN A+ ++++P++ + PT+V+AG+PNVGKS+L+
Sbjct: 115 VV---KSAYGRVASIIEQIDDELRFLNDAKNRMREIPILQ-DLPTIVVAGYPNVGKSSLV 170
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
++T KPE+ASYPFTT+ IN+G E R Q+IDTPGLLDRPLS+RN IE++A+LALK
Sbjct: 171 ARISTVKPEVASYPFTTKKINLGFAEFAGKRVQIIDTPGLLDRPLSKRNRIERRAVLALK 230
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRIVEEL 304
+L ++I+++ DP+E CG+ LE+Q+ L EI F P + V +K D+ + +
Sbjct: 231 HLADIILFVIDPTETCGYSLEKQLSLLEEIKGYFA-KPTVEVYSKADMHDRRDRQ----- 284
Query: 305 VKEKGIKFLKISALKGEGVDKVREEITKTLR 335
SA+ GEG+D++ +EI K ++
Sbjct: 285 ---------AYSAVTGEGIDELIKEIEKMVK 306
>emb|CAC12070.1| (AL445066) GTP-binding protein related protein, GTP1/OBG-family
[Thermoplasma acidophilum]
Length = 326
Score = 235 bits (592), Expect = 8e-61
Identities = 123/321 (38%), Positives = 199/321 (61%), Gaps = 4/321 (1%)
Query: 7 RMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKVLE 66
R+PTVL + ELIDKAF RA R + P DK+++ R+ + RI T+ ++ R L ++++
Sbjct: 9 RIPTVLRSQELIDKAFSRASRIEEPYFP--DKIERIRKEVQDRISTIESISRSFLDRLVK 66
Query: 67 RTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNEMA 126
+ P ++ L FY L+D++ D D + +++ ID +++ ++ ++ R++ +K +
Sbjct: 67 KFPSINNLHPFYSSLIDLMFDIDQYKISLSKIDRTSQMIEQISGEHIRRLKAAKTVEDAN 126
Query: 127 ELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLLKA 186
+ R +YGR AS++ +ID L +L K R+ +K +P +D+ T +IAG PNVGKS+LL A
Sbjct: 127 RIMRSYYGRFASLVHEIDQDLLFLGKCRDYMKKIPDIDVNLRTYIIAGMPNVGKSSLLAA 186
Query: 187 LTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALKYL 246
LTT KPEIA YPFTT+ + +G E GY R Q IDTPG+LDR E N+IEK A+LAL+++
Sbjct: 187 LTTKKPEIAPYPFTTKSVIIGIAEHGYERIQFIDTPGILDRDFDEMNQIEKNAVLALRHI 246
Query: 247 GNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRIVEELVK 306
+I++FD S+ + E Q HL+ +I E + + V K+D++ E + +I +
Sbjct: 247 KGTVIFLFDYSDQSLYDPEMQEHLYQQIREHI-NPDIIRVQTKMDISREKREKIAISVNS 305
Query: 307 EKGIKFLKISALKGEGVDKVR 327
E G+ LK + + G D VR
Sbjct: 306 EGGLDPLK-AIIFGRADDDVR 325
>gb|AAG20635.1| (AE005133) GTP-binding protein homolog; Gbp4 [Halobacterium sp.
NRC-1]
Length = 327
Score = 221 bits (558), Expect = 8e-57
Identities = 114/299 (38%), Positives = 177/299 (59%), Gaps = 18/299 (6%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
FE +PT T++ELID+AF RA RA A K+ + ++ ++T SN++ DNL V
Sbjct: 3 FESLPTTPTSEELIDQAFSRAARAGRA--------KQGVEAQQSMLQTASNILGDNLHNV 54
Query: 65 LERTPGLSTLPKFYQELVDVLVDR--------DTFHKAMAGIDWAIRIVRELEERYVERI 116
+ P + FY EL D ++ D + ++ + WA +L Y+ R+
Sbjct: 55 VTEWPDFDHVDPFYGELADAILREEFASEDGIDELRQHLSELSWASSKTHDLGREYIGRL 114
Query: 117 RYSKDPNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHP 176
D + LR+Q +GR+ SV+ ++D L + AR+ LK LP + + PTVV+AG+P
Sbjct: 115 --PNDAEKARSLRKQGFGRMGSVMDQVEDDLEAVGAARDALKTLPEIQPDVPTVVVAGYP 172
Query: 177 NVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIE 236
NVGKS+ + A+T A E A YPFTT+ +++G FE + +Q++DTPGLLDRP ERNEIE
Sbjct: 173 NVGKSSFVNAVTNASIETAEYPFTTKSVDIGHFERDHITWQLVDTPGLLDRPADERNEIE 232
Query: 237 KQAILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEE 295
QA+ AL ++G++I++ D S CG+P+ +Q L E+ + F D P + V +K D++ E
Sbjct: 233 DQAVSALTHVGDVILFFVDASAACGYPVADQQALRAEVGDRFGDAPLVTVCSKTDLSAE 291
>gb|AAD55439.1|AF181654_1 (AF181654) BcDNA.LD23830 [Drosophila melanogaster]
>gi|7303900|gb|AAF58945.1| (AE003833) BcDNA:LD23830 gene
product [Drosophila melanogaster]
Length = 652
Score = 208 bits (524), Expect = 8e-53
Identities = 115/355 (32%), Positives = 195/355 (54%), Gaps = 7/355 (1%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++ V A + ID + +R +G K+ + R +++ D L ++
Sbjct: 6 FKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHDRLSQI 65
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
++ P L + FY +L++VL D+D + A+ ++ A +V + + YV ++Y
Sbjct: 66 IQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYGDSLYR 125
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+L++ GR+A++++ L YL + R+ L LP +D + T++I G PNVGKS+ +
Sbjct: 126 CKQLKKAALGRMATIMKRQASNLTYLEQVRQHLSRLPTIDPYSRTIIICGFPNVGKSSFI 185
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A E+ Y FTT+ + VG + Y R+QVIDTPG+LD PL ERN IE QAI AL
Sbjct: 186 NKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAITALA 245
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV-----AEEDKIR 299
+L ++Y D SE CG LEEQ+ LF I F + P ++ INKID+ E++
Sbjct: 246 HLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLILAINKIDILTPEDLPEERRA 305
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRP--LAEKIAKEKIEEELRR 352
I+ +L ++K I + +S ++ GV +V+ E + L + +K+ +K++ L R
Sbjct: 306 IITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRVDQKMRTKKVDNILNR 360
>gi|6325164 (putative) nucleolar G-protein; homologs identified in human and
Trypanosoma brucei; Nog1p [Saccharomyces cerevisiae]
>gi|2132184|pir||S61973 hypothetical protein YPL093w -
yeast (Saccharomyces cerevisiae)
>gi|1151233|gb|AAB68206.1| (U43281) Lpg15p
[Saccharomyces cerevisiae]
Length = 647
Score = 205 bits (517), Expect = 5e-52
Identities = 109/360 (30%), Positives = 201/360 (55%), Gaps = 12/360 (3%)
Query: 1 MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN 60
M+ ++ +PTV A++L+D R +R G K+ + R +++ +
Sbjct: 1 MQLSWKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKYTGEGFVEK 60
Query: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK 120
+L+ P ++ + F+++L+D L +++ + ++A I A +V ++ YV +++ +
Sbjct: 61 FEDILKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAISRAKSLVEQVARDYVRLLKFGQ 120
Query: 121 DPNEMAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGK 180
+ +L+R GR+A++++ + D L YL + R+ + LP +D T T++I G+PNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGK 180
Query: 181 STLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAI 240
S+ L+ +T + ++ Y FTT+ + VG F+ Y R+Q IDTPG+LDRP E N IE Q+I
Sbjct: 181 SSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 241 LALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV-----AEE 295
A+ +L + ++Y D SE CGF +E Q+ LF+ I F + +VVINK D+ +E
Sbjct: 241 YAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVINKTDIIRPEDLDE 300
Query: 296 DKIRIVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKIAKEKIEEELRRYRR 355
++ +++E + + G++ + S E V +VR + EK+ +IE +L+ R
Sbjct: 301 ERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNK-------ACEKLLASRIENKLKSQSR 353
>gi|6912532 GTP-binding protein [Homo sapiens] >gi|4191616|gb|AAD09830.1|
(AF120334) GTP-binding protein NGB [Homo sapiens]
Length = 633
Score = 201 bits (505), Expect = 1e-50
Identities = 117/355 (32%), Positives = 187/355 (51%), Gaps = 8/355 (2%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++ V +A + ID + +R + ++ + R +++ D L ++
Sbjct: 6 FKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHDRLSQI 65
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
L P L + FY +L+++L D+D + A+ I+ A +V + + YV ++Y
Sbjct: 66 LTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYGDSLYR 125
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+L+R GR+ +V++ L YL + R+ L LP +D T T+++ G+PNVGKS+ +
Sbjct: 126 CKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVGKSSFI 185
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A ++ Y FTT+ + VG + Y R+QV+DTPG+LD PL +RN IE QAI AL
Sbjct: 186 NKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALA 245
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV-----AEEDKIR 299
+L ++Y+ D SE CG L EQ+ LF I F + P +VV NK DV ED +
Sbjct: 246 HLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDVKRIAELSEDDQK 305
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTL--RPLAEKIAKEKIEEELRR 352
I +L E G ++ S L EGV KV+ E L + K+ K+ E L R
Sbjct: 306 IFTDLQSE-GFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNR 359
>dbj|BAA91752.1| (AK001552) unnamed protein product [Homo sapiens]
Length = 634
Score = 201 bits (505), Expect = 1e-50
Identities = 117/355 (32%), Positives = 187/355 (51%), Gaps = 8/355 (2%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++ V +A + ID + +R + ++ + R +++ D L ++
Sbjct: 6 FKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHDRLSQI 65
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
L P L + FY +L+++L D+D + A+ I+ A +V + + YV ++Y
Sbjct: 66 LTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYGDSLYR 125
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+L+R GR+ +V++ L YL + R+ L LP +D T T+++ G+PNVGKS+ +
Sbjct: 126 CKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVGKSSFI 185
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A ++ Y FTT+ + VG + Y R+QV+DTPG+LD PL +RN IE QAI AL
Sbjct: 186 NKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALA 245
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV-----AEEDKIR 299
+L ++Y+ D SE CG L EQ+ LF I F + P +VV NK DV ED +
Sbjct: 246 HLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDVKRIAELSEDDQK 305
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTL--RPLAEKIAKEKIEEELRR 352
I +L E G ++ S L EGV KV+ E L + K+ K+ E L R
Sbjct: 306 IFTDLQSE-GFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNR 359
>gi|11430129 GTP-binding protein [Homo sapiens]
Length = 634
Score = 201 bits (505), Expect = 1e-50
Identities = 117/355 (32%), Positives = 187/355 (51%), Gaps = 8/355 (2%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++ V +A + ID + +R + ++ + R +++ D L ++
Sbjct: 6 FKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHDRLSQI 65
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
L P L + FY +L+++L D+D + A+ I+ A +V + + YV ++Y
Sbjct: 66 LTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYGDSLYR 125
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+L+R GR+ +V++ L YL + R+ L LP +D T T+++ G+PNVGKS+ +
Sbjct: 126 CKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVGKSSFI 185
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A ++ Y FTT+ + VG + Y R+QV+DTPG+LD PL +RN IE QAI AL
Sbjct: 186 NKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALA 245
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV-----AEEDKIR 299
+L ++Y+ D SE CG L EQ+ LF I F + P +VV NK DV ED +
Sbjct: 246 HLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDVKRIAELSEDDQK 305
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTL--RPLAEKIAKEKIEEELRR 352
I +L E G ++ S L EGV KV+ E L + K+ K+ E L R
Sbjct: 306 IFTDLQSE-GFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNR 359
>pir||T32580 hypothetical protein T07A9.9 - Caenorhabditis elegans
>gi|2702365|gb|AAB92007.1| (AF036706) similar to S.
cerevisiae Lpg15p (GB:U43281) [Caenorhabditis elegans]
Length = 681
Score = 196 bits (494), Expect = 3e-49
Identities = 109/342 (31%), Positives = 185/342 (53%), Gaps = 8/342 (2%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+R+ V A EL D + +R R + + R +I+ + + D L ++
Sbjct: 7 FKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDKLTQI 66
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
+ P + + FY +L+++L DRD + A+ ++ A ++ + YV ++Y+
Sbjct: 67 ITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSLYR 126
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
L+R GR+ +L+ YL + R+ L LP +D T T+++ G PNVGKS+ +
Sbjct: 127 CKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGKSSFI 186
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A E+ Y FTT+ + VG + + R+QVIDTPG+LD+PL +RN IE QA+ AL
Sbjct: 187 NNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLEDRNTIEMQAVTALA 246
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEE-----DKIR 299
+L ++++ D SE C +EEQ+HLF I F + P L+ +NK+D+ +K
Sbjct: 247 HLKASVLFMMDVSEQCDRSIEEQLHLFESIRPLFANKPVLIGLNKVDIRHRSDLPPEKAA 306
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKI 341
++++L KE GI ++ S L EGV +R+ L LA+++
Sbjct: 307 LLDQLEKE-GIPIIETSTLTQEGVMGLRDRACDEL--LAQRV 345
>gb|AAC24364.1| (AF065393) putative G-binding protein [Homo sapiens]
Length = 562
Score = 193 bits (485), Expect = 3e-48
Identities = 113/345 (32%), Positives = 184/345 (52%), Gaps = 10/345 (2%)
Query: 16 ELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKVLERTPGLSTLP 75
+ ID + +R + ++ + R +++ D L ++L P L +
Sbjct: 1 DFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHDRLSQILTDFPKLDDIH 60
Query: 76 KFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNEMAELRRQFYGR 135
FY +L+++L D+D + A+ I+ A +V + + YV ++Y +L+R GR
Sbjct: 61 PFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYGDSLYRCKQLKRAALGR 120
Query: 136 VASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLLKALTTAKPEIA 195
+ ++++ L YL + R+ L LP +D T T+++ G+PNVGKS+ + +T A ++
Sbjct: 121 MCTIIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVGKSSFINKVTRADVDVQ 180
Query: 196 SYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALKYLGNLIIYIFD 255
Y FTT+ + VG + Y R+QV+DTPG+LD PL +RN IE QAI AL +L ++Y+ D
Sbjct: 181 PYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMD 240
Query: 256 PSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV------AEEDKIRIVEELVKEKG 309
SE CG L+EQ+ LF I F + P +VV NK DV +EED+ +I +L E G
Sbjct: 241 LSEQCGHGLKEQLELFQNIRPLFINKPLIVVANKCDVKRITELSEEDQ-KIFTDLQAE-G 298
Query: 310 IKFLKISALKGEGVDKVREEITKTL--RPLAEKIAKEKIEEELRR 352
++ S L EGV +V+ E L + K+ K+ E L R
Sbjct: 299 FPVIETSTLTEEGVIQVKTEACDRLLAHRVETKMKGNKVNEVLNR 343
>gb|AAG29629.1|AC079284_10 (AC079284) GTP-binding protein, putative [Arabidopsis thaliana]
Length = 671
Score = 191 bits (481), Expect = 9e-48
Identities = 114/367 (31%), Positives = 194/367 (52%), Gaps = 20/367 (5%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+R+ V E +D R +R +G K+ + RQ +++ L +
Sbjct: 6 FKRITVVPNGKEFVDIILSRTQRQTPTVVHKGYKINRLRQFYMRKVKYTQTNFHAKLSAI 65
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
++ P L + FY +L+ VL ++D + A+ ++ A ++ ++ + YV+ ++Y
Sbjct: 66 IDEFPRLEQIHPFYGDLLHVLYNKDHYKLALGQVNTARNLISKISKDYVKLLKYGDSLYR 125
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
L+ GR+ +VL+ I L YL + R+ + LP +D T TV+I G+PNVGKS+ +
Sbjct: 126 CKCLKVAALGRMCTVLKRITPSLAYLEQIRQHMARLPSIDPNTRTVLICGYPNVGKSSFM 185
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A ++ Y FTT+ + VG + Y RYQVIDTPG+LDRP +RN IE +I AL
Sbjct: 186 NKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALA 245
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKID------VAEEDKI 298
+L +++ D S CG+ + +Q LF+ I F + P ++V NK D ++EED+
Sbjct: 246 HLRAAVLFFLDISGSCGYTIAQQAALFHSIKSLFMNKPLVIVCNKTDLMPMENISEEDR- 304
Query: 299 RIVEELVKEKGIK----------FLKISALKGEGVDKVREEITKTL--RPLAEKIAKEKI 346
+++EE+ K + +K LK+S L EGV V+ + L + + K+ +KI
Sbjct: 305 KLIEEM-KSEAMKTAMGASEEQVLLKMSTLTDEGVMSVKNAACERLLDQRVEAKMKSKKI 363
Query: 347 EEELRRY 353
+ L R+
Sbjct: 364 NDHLNRF 370
>gb|AAK40935.1| GTP-binding protein [Sulfolobus solfataricus]
Length = 332
Score = 189 bits (475), Expect = 4e-47
Identities = 119/331 (35%), Positives = 189/331 (56%), Gaps = 15/331 (4%)
Query: 1 MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN 60
M NPFE++ A++ ID +R + R RE R++ ++
Sbjct: 1 MLNPFEKLQIPPKANQTIDTMLKRLPKIGGT---------TVRDREIRRLKEYYERIK-K 50
Query: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK 120
+E+ P + L FY E ++ D + ++ I ++ ++Y+ +IR S
Sbjct: 51 YYDFVEQFPKIDELHPFYLEATRIMTDINKLRICLSVTKKTSVISMKILKKYINQIRKSP 110
Query: 121 DPNEMAELRRQFYGRVASVLRDIDDRL-RYLNKAREVLKDLPVVDLETPTVVIAGHPNVG 179
+ NE + RQ +GRV+SVLR + + R ++ A+E LK + +D PT+V+AG PNVG
Sbjct: 111 E-NESNRIMRQAFGRVSSVLRKSSECIDRVIDVAKE-LKKIQGIDPTLPTIVVAGPPNVG 168
Query: 180 KSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQA 239
KSTL+ ++TAKPEIASYPFTT+ ++VG FR QVIDTPG+LDRP +ERN IE++A
Sbjct: 169 KSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQVIDTPGILDRPEAERNRIERKA 228
Query: 240 ILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIR 299
A++ L +I+++FD S +E QI LF E+ + + VINKID E+ +
Sbjct: 229 TNAIRNLNGIIVFMFDSSISSVLSVEGQIELFREV--KLLKKIVIPVINKIDEKYEEYYK 286
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEI 330
+ + + +G ++ +ISA KG G+DK++EE+
Sbjct: 287 KIVDFLLSEGNEWHEISAEKGIGIDKLKEEL 317
>emb|CAB57676.1| (Y18930) probable GTP-binding protein [Sulfolobus solfataricus]
Length = 332
Score = 189 bits (475), Expect = 4e-47
Identities = 119/331 (35%), Positives = 189/331 (56%), Gaps = 15/331 (4%)
Query: 1 MRNPFERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDN 60
M NPFE++ A++ ID +R + R RE R++ ++
Sbjct: 1 MLNPFEKLQIPPKANQTIDTMLKRLPKIGGT---------TVRDREIRRLKEYYERIK-K 50
Query: 61 LRKVLERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSK 120
+E+ P + L FY E ++ D + ++ I ++ ++Y+ +IR S
Sbjct: 51 YYDFVEQFPKIDELHPFYLEATRIMTDINKLRICLSVTKKTSVISMKILKKYINQIRKSP 110
Query: 121 DPNEMAELRRQFYGRVASVLRDIDDRL-RYLNKAREVLKDLPVVDLETPTVVIAGHPNVG 179
+ NE + RQ +GRV+SVLR + + R ++ A+E LK + +D PT+V+AG PNVG
Sbjct: 111 E-NESNRIMRQAFGRVSSVLRKSSECIDRVIDVAKE-LKKIQGIDPTLPTIVVAGPPNVG 168
Query: 180 KSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQA 239
KSTL+ ++TAKPEIASYPFTT+ ++VG FR QVIDTPG+LDRP +ERN IE++A
Sbjct: 169 KSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQVIDTPGILDRPEAERNRIERKA 228
Query: 240 ILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIR 299
A++ L +I+++FD S +E QI LF E+ + + VINKID E+ +
Sbjct: 229 TNAIRNLNGIIVFMFDSSISSVLSVEGQIELFREV--KLLKKIVIPVINKIDEKYEEYYK 286
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEI 330
+ + + +G ++ +ISA KG G+DK++EE+
Sbjct: 287 KIVDFLLSEGNEWHEISAEKGIGIDKLKEEL 317
>pir||T40600 gtp-binding protein - fission yeast (Schizosaccharomyces pombe)
(fragment) >gi|4467273|emb|CAB37597.1| (AL035570)
gtp-binding protein [Schizosaccharomyces pombe]
Length = 340
Score = 187 bits (470), Expect = 2e-46
Identities = 94/335 (28%), Positives = 181/335 (53%), Gaps = 5/335 (1%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+ + + + +D R +R G K+ + R +++ + + + L +
Sbjct: 6 FKNITPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTITEKLDSI 65
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
L+ P L+ + F+ +L+++L DRD A++ + A +V + Y+ ++Y
Sbjct: 66 LQEFPKLNDIHPFHADLLNILYDRDHLKIALSQLSTAKHLVENVARDYIRLLKYGDSLYR 125
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+L+R GR+A++++ L +L + R+ L LP +D T T+++ G+PNVGKS+ +
Sbjct: 126 CKQLKRAALGRMATIIKRQKSSLEFLEQVRQHLSRLPAIDPNTRTLLVCGYPNVGKSSFM 185
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A+ ++ Y FTT+ + VG F+ Y R+QVIDTPG+LD PL + N IE Q+I A+
Sbjct: 186 NKVTRAQVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGILDHPLEQMNTIEMQSITAMA 245
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKI-----R 299
+L + ++Y D SE CG+ + Q+ L++ I F + ++V+NKID + +
Sbjct: 246 HLRSAVLYFMDLSEMCGYSVAAQVKLYHSIKPLFANKVTILVLNKIDAMRPEDLDQKNQE 305
Query: 300 IVEELVKEKGIKFLKISALKGEGVDKVREEITKTL 334
+++ ++ + +K ++ S ++ GV VR + L
Sbjct: 306 LLQTIIDDGNVKVVQTSCVQDIGVMDVRTTACEAL 340
>gb|AAF01061.1|AF189284_1 (AF189284) nucleolar G-protein NOG1 [Trypanosoma brucei]
Length = 655
Score = 180 bits (453), Expect = 2e-44
Identities = 105/335 (31%), Positives = 167/335 (49%), Gaps = 5/335 (1%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+ + V + + ID + +R +G + + RQ +++ + + L +
Sbjct: 7 FKTVTVVPSYKDFIDIVLSKTQRKTPTVVHKGYHISRIRQFYMRKVKFTQKTINEKLTHI 66
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
L P + + FY +L+ VL DRD + A+ + +V + YV ++Y
Sbjct: 67 LTEFPRMDDIHPFYGDLMHVLYDRDHYKVALGQVGAVRHMVDNVGRDYVRLLKYGDSLYR 126
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
+L+R GR+A+ + + L YL K R+ + LP +D T++I G PNVGKS+ +
Sbjct: 127 CKQLKRAALGRMATACKKLTSALVYLEKVRQHMSRLPSIDPNARTLLITGFPNVGKSSFM 186
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A E+ Y FTT+ + VG + Y +QVIDTPG+LD L ERN IE QAI AL
Sbjct: 187 NKVTRADVEVQPYAFTTKSLFVGHTDFKYASWQVIDTPGILDHSLEERNVIEMQAITALA 246
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDVAEEDKIRIVEE- 303
+L I++ D S CG + +Q+ LF I F P +VV NK D+ D I E+
Sbjct: 247 HLRACILFFMDLSTQCGHSIAQQVSLFKSIGPLFTGKPVIVVFNKSDLCTFDDITAEEQS 306
Query: 304 ----LVKEKGIKFLKISALKGEGVDKVREEITKTL 334
++E G K++ S L GV ++ +TL
Sbjct: 307 LVMTAIEECGAKWITTSTLTDAGVGDLKTLACETL 341
>pir||G72747 hypothetical protein APE0510 - Aeropyrum pernix (strain K1)
>gi|5104159|dbj|BAA79475.1| (AP000059) 352aa long
hypothetical protein [Aeropyrum pernix]
Length = 352
Score = 167 bits (419), Expect = 2e-40
Identities = 110/330 (33%), Positives = 172/330 (51%), Gaps = 22/330 (6%)
Query: 11 VLTADELIDKAFRRAERAASAFKPRGDKVKKARQREEL----RIRTVSNVVRDNLRKVLE 66
V T DE++++ RR R A ++A EE+ R+R + D +R+V
Sbjct: 24 VPTYDEILERIGRRPRRRAR---------RRAAYEEEIELLARVRDIVISRTDFVREVAR 74
Query: 67 RTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNEMA 126
GL F++ELV++ DR A++ I A ++ L E+Y + S+ P E
Sbjct: 75 LLDGLHP---FHRELVEIEFDRRDVSSAVSCISRARKMTDRLMEKYKVLLLASESPKEAR 131
Query: 127 ELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLLKA 186
L R+ GR+ S+ + L L + LP +D +PT++++G P+ GKSTL+K
Sbjct: 132 ALAREARGRILSLYKRCSRGLEVLRSLMVFMHRLPAIDPGSPTIIVSGPPSSGKSTLVKN 191
Query: 187 LTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALKYL 246
++ AKP++A YPFTT+ I++G FE G R QV+DTPGLLDR L E N +E++A AL+ L
Sbjct: 192 VSRAKPKVADYPFTTKQIHIGHFEAGEGRVQVVDTPGLLDRSLEEMNPVERRAAAALRLL 251
Query: 247 GNLIIYIFDPSEYCGFPLEEQIHLF-NEIYEEFKDMPFLVVINKIDVAE----EDKIRIV 301
++++FDP L+ Q L N + + VV+NK D + E+ +
Sbjct: 252 DGAVLFLFDPRPDAYMGLDRQASLLENTVAKLVTGRRIYVVVNKEDAVDRGRLEEAVAAA 311
Query: 302 EELVKEKGIKFL-KISALKGEGVDKVREEI 330
EE + G FL SA+ GE +V E+
Sbjct: 312 EEAAERVGAVFLGSTSAVDGEKARRVVGEV 341
>gb|AAD32880.1|AC005489_18 (AC005489) F14N23.18 [Arabidopsis thaliana]
Length = 626
Score = 156 bits (390), Expect = 4e-37
Identities = 83/281 (29%), Positives = 149/281 (52%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++ V + +D R +R +GD++ K R +++ + + L +
Sbjct: 35 FKKITVVPNGKQFVDIVLSRTQRQTPTVVHKGDRICKLRSFYMRKVKFTESNFNEKLSAI 94
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
++ P L + FY++L+ VL ++D + A+ ++ A + ++ YV+ +++
Sbjct: 95 IDEFPRLKEIQPFYEDLLHVLYNKDHYKLALGQVNTAKNKISKIAMDYVKLLKHGDSLYR 154
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
L+ GR+ +V++ I L YL + R+ + LP +D T T++I G PNVGKS+ +
Sbjct: 155 CKCLKVAALGRMCTVMKGIGPSLAYLEQVRQHIARLPSIDPNTRTLLICGCPNVGKSSFM 214
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+T A + Y FTT+ + +G + RYQVIDTPGLLDR + +RN IE +I AL
Sbjct: 215 NKVTRADVAVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLLDREIEDRNIIELCSITALA 274
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLV 285
++ +++ D S CG+ + +Q LF+ I FK+ P V
Sbjct: 275 HIRAAVLFFLDISGSCGYTIAQQASLFHNIKSVFKNKPLRV 315
>gb|AAF14665.1|AC011713_13 (AC011713) EST gb|AI997445 comes from this gene. [Arabidopsis
thaliana]
Length = 437
Score = 123 bits (306), Expect = 3e-27
Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 27/358 (7%)
Query: 5 FERMPTVLTADELIDKAFRRAERAASAFKPRGDKVKKARQREELRIRTVSNVVRDNLRKV 64
F+++P V+ + +L A R+++R K + K+ R R ++ + L+
Sbjct: 92 FQKLPMVMPSIDLYASALRKSKRVQPT-KGIANIAKRERNRGAKQLDAFMKELALPLKGY 150
Query: 65 LERTPGLSTLPKFYQELVDVLVDRDTFHKAMAGIDWAIRIVRELEERYVERIRYSKDPNE 124
+E P L + + L+D+ + + + + +D + V+ + + + + E
Sbjct: 151 MESFPRKKLLHPYERSLIDLTLGDGKYEEVLGKVDVLRKKVQSVGKEHASLCAKALSKKE 210
Query: 125 MAELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLETPTVVIAGHPNVGKSTLL 184
E + ++ V + + L +VL+ +PVVDLE PT+ + G PNVGKS+L+
Sbjct: 211 AEERLSEGVEKLELVFQQQGGAVDDLLTIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLV 270
Query: 185 KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPLSERNEIEKQAILALK 244
+ L+T KPEI E QV DTPGLL R +RN +EK + L
Sbjct: 271 RILSTGKPEI--------------IESSRNALQVTDTPGLLRRCDEDRNNLEKLTLAVLT 316
Query: 245 YLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVVINKIDV--------AEED 296
+L ++Y+ D + CG +Q ++ E+ E FKD ++ ++K D+ A+ED
Sbjct: 317 HLPTAVLYVHDLTGECGTSPSDQFQIYKEMKERFKDYLWIDAVSKCDLLGGSPVMYAKED 376
Query: 297 KIRIVEELVK--EKG-IKFLKISALKGEGVDKVREEITKTLRPLAEKI-AKEKIEEEL 350
+ E++K E+G + + +S +G+++++ ++ + L EKI + EK ++ +
Sbjct: 377 RSSDDAEIIKYRERGPDESIHVSVKTEQGLNELKNKVKEVLSSEMEKIQSGEKTDQSV 434
>pir||E70477 GTP-binding protein obg - Aquifex aeolicus
>gi|2984292|gb|AAC07816.1| (AE000771) GTP-binding
protein [Aquifex aeolicus]
Length = 343
Score = 92.8 bits (227), Expect = 5e-18
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 24/185 (12%)
Query: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE-DGYFRYQVIDTPGLLDRP 228
V + G PN GKSTLL LT AKP+IA YPFTT N+G E D R + D PGL++
Sbjct: 163 VGLVGFPNAGKSTLLSRLTRAKPKIADYPFTTLSPNLGVMELDWERRLVIADIPGLIE-- 220
Query: 229 LSERNEIEKQAILALKYLGNL-----IIYIFDPSEYCGFPLEEQIHLFNEIYEEFK---- 279
+ K A L ++L ++ + ++ D S+ F E + F I E +
Sbjct: 221 -----DAHKGAGLGHEFLRHIERTKFLAHVIDVSD---FREREPVQAFEAINRELELYSP 272
Query: 280 ---DMPFLVVINKID-VAEEDKIRIVEELVKEKGIKFLKISALKGEGVDKVREEITKTLR 335
P +VV NKID +++ + +E+ KEKG +F +SAL GEG+++++E + K
Sbjct: 273 KLAQKPQIVVANKIDALSDRSLLSELEKYFKEKGYEFYAVSALTGEGIEELKEGLWKKYE 332
Query: 336 PLAEK 340
+ +K
Sbjct: 333 EIRDK 337
>pir||B72418 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4980588|gb|AAD35192.1|AE001696_6 (AE001696)
conserved hypothetical protein [Thermotoga maritima]
Length = 435
Score = 81.9 bits (199), Expect = 1e-14
Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 19/190 (10%)
Query: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPL 229
V + G+PNVGKS+L+ ++ A+P+IA+YPFTT N+G + F + V D PGL++
Sbjct: 167 VGLVGYPNVGKSSLISRISNARPKIANYPFTTLIPNLGVVKYDDFSFVVADIPGLIEGA- 225
Query: 230 SERNEIEKQAILALKYLGN--LIIYIFDPSEYCGFPLEEQIHLFNEIYEEFK-------D 280
+E + L+++ LI ++ D S G+ E+ + + I EE K +
Sbjct: 226 ---SEGVGLGNVFLRHVERCYLIAHVIDVS---GYEREDPVRDYFVIREEMKKYSPFLLE 279
Query: 281 MPFLVVINKID-VAEEDKIRIVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAE 339
P +VV NKID + +E+ +I++ L + + +SA+ GEG+D + ++ +R +
Sbjct: 280 KPEIVVANKIDLIGKEELEKILKRLRDATNREVIPVSAVTGEGIDLLVSKLASIVREM-- 337
Query: 340 KIAKEKIEEE 349
K+ K + +EE
Sbjct: 338 KVEKPERKEE 347
>pir||B75563 GTP-binding protein Obg - Deinococcus radiodurans (strain R1)
>gi|6457748|gb|AAF09676.1|AE001871_8 (AE001871)
GTP-binding protein Obg [Deinococcus radiodurans]
Length = 438
Score = 80.4 bits (195), Expect = 3e-14
Identities = 59/180 (32%), Positives = 98/180 (53%), Gaps = 25/180 (13%)
Query: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRG--INVGQFEDGY-----FRYQVIDTP 222
V + G+PN GKS+LL AL+ A P IA YPFTT + V Q ED R+ + D P
Sbjct: 162 VGLVGYPNAGKSSLLAALSRANPAIADYPFTTLSPILGVVQREDEQGVSLDERFTMADIP 221
Query: 223 GLLDRPLSERNEIEKQAILALKYLGN-----LIIYIFDPSEYCGFPLEEQIHLFNEI--Y 275
G+++ + L L++L + L++Y+ D + P+EE L E+ Y
Sbjct: 222 GIIEGASEGKG-------LGLEFLRHISRTRLLVYVLDVTRN---PVEELQQLQAELRAY 271
Query: 276 E-EFKDMPFLVVINKIDVAEEDKIRIVEELVKEKGIKFLKISALKGEGVDKVREEITKTL 334
+ D LV +NK+++ E D ++VE+ + E+G+ L++SA +G G++ +RE + + L
Sbjct: 272 DPSLLDNVALVALNKVELVEPDLAQMVEDELAEQGLPVLQVSAKEGTGLNTLRETLFQLL 331
>pir||A72397 thiophene oxidation protein ThdF-related GTPase - Thermotoga
maritima (strain MSB8)
>gi|4980765|gb|AAD35356.1|AE001709_2 (AE001709)
thiophene oxidation protein ThdF-related GTPase
[Thermotoga maritima]
Length = 450
Score = 78.0 bits (189), Expect = 2e-13
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 19/177 (10%)
Query: 170 VVIAGHPNVGKSTLL-KALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRP 228
+VI G PNVGKSTLL + L + + P TTR + + ++++DT G+
Sbjct: 214 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 273
Query: 229 --LSERNEIEKQAILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLVV 286
L ER IE+ K ++++++ D S PL+E+ +I E K+ +LVV
Sbjct: 274 NDLVERLGIERTLQEIEK--ADIVLFVLDASS----PLDEEDR---KILERIKNKRYLVV 324
Query: 287 INKIDVAEEDKIRIVEELVKEK---GIKFLKISALKGEGVDKVREEITKTLRPLAEK 340
INK+DV E +I EE +K K +KISALKGEG++K+ E I + + + E+
Sbjct: 325 INKVDVVE----KINEEEIKNKLGTDRHMVKISALKGEGLEKLEESIYRETQEIFER 377
>sp|O67030|THDF_AQUAE POSSIBLE THIOPHENE AND FURAN OXIDATION PROTEIN THDF
>gi|7448681|pir||C70375 thiophene and furan oxidation
protein - Aquifex aeolicus >gi|2983408|gb|AAC06992.1|
(AE000711) thiophene and furan oxidation protein
[Aquifex aeolicus]
Length = 448
Score = 74.5 bits (180), Expect = 2e-12
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 42/272 (15%)
Query: 105 VRELEERYVERIRYSKDPNEMAE------LRRQFYGRVASVLRDIDDRLRYLNKAREVLK 158
+R L E +E + Y + E AE + Q V V+ I++ L+ + + +
Sbjct: 155 IRPLRETLLELLAYVEADIEFAEEDIPTLTKEQVIQMVDKVIEGINELLKTAKTGKFIRE 214
Query: 159 DLPVVDLETPTVVIAGHPNVGKSTLLKALTTAKPEIAS-YPFTTRGINVGQFEDGYFRYQ 217
+ + I G PNVGKS+L AL + I + TTR + +
Sbjct: 215 GVKLA--------IVGRPNVGKSSLFNALLKEERAIVTDIAGTTRDFIEETLQIKGVPVR 266
Query: 218 VIDTPGLLD-RPLSERNEIEKQAILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYE 276
++DT G+ + + L ER +E+ + +LI+++ D S+ EE + IYE
Sbjct: 267 LVDTAGIRETKDLVERIGVERSKQKVKE--ADLILFVIDASQEI---TEEDLR----IYE 317
Query: 277 EFKDMPFLVVINKIDVAEEDKIRIVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRP 336
E K+ +VV NK+D+ I L K KG K +K+SALKG G++++ EEI K +
Sbjct: 318 EIKEKDHIVVANKVDLG------IRANLEKFKGEKIVKVSALKGTGLEELSEEILKKVGA 371
Query: 337 LAEKIAK-----------EKIEEELRRYRRPF 357
E+ +K +E L R++ F
Sbjct: 372 NLEESVNIYISVRHETLLKKAKEVLERFKEEF 403
>sp|Q9WZV1|ERA_THEMA GTP-BINDING PROTEIN ERA HOMOLOG >gi|7438444|pir||H72326 conserved
hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981380|gb|AAD35929.1|AE001751_9 (AE001751)
conserved hypothetical protein [Thermotoga maritima]
Length = 300
Score = 74.5 bits (180), Expect = 2e-12
Identities = 70/206 (33%), Positives = 110/206 (52%), Gaps = 29/206 (14%)
Query: 163 VDLETPTVVIAGHPNVGKSTLLKALTTAKPEIAS-YPFTTRGINVGQFEDGYFRYQVIDT 221
+ +++ V +AG PNVGKST + A+ K I S P TTR + D + +DT
Sbjct: 1 MSIKSGFVALAGKPNVGKSTFINAVMGRKVVIVSDKPQTTRNRINCIYTDKDSQIIFVDT 60
Query: 222 PGLLDRPLSERNE-IEKQAILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKD 280
PG + +PL E + K A+ ALK + +L++++ D ++ GF ++ H+ + +
Sbjct: 61 PG-IHKPLHRLGEYMVKAAVQALKGV-DLVLFMLDAAD--GFTKTDE-HVAKIVND--SG 113
Query: 281 MPFLVVINKIDVAEEDKIRIVEELVK---EKGIKFLKISALKGEGV----DKVREEITK- 332
++ +NKIDVA E+K + V EL K E + ISALKGEGV +K++EE+ +
Sbjct: 114 TKTIIAVNKIDVAGEEKAKAVGELAKSMVENVVSVHYISALKGEGVFEVLEKIKEELPEG 173
Query: 333 ---------TLRPL---AEKIAKEKI 346
T RPL A +I +EKI
Sbjct: 174 PQYYPEDMVTDRPLSFMAAEIIREKI 199
>gb|AAB81507.1| (AF019407) GTP-binding protein [Caulobacter crescentus]
Length = 354
Score = 74.1 bits (179), Expect = 2e-12
Identities = 60/189 (31%), Positives = 95/189 (49%), Gaps = 20/189 (10%)
Query: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE-DGYFRYQVIDTPGLLDRP 228
V + G PN GKST L A + AKP+IA YPFTT N+G + R+ + D PGL++
Sbjct: 162 VGLVGLPNAGKSTFLAAASAAKPKIADYPFTTLTPNLGVVDLSSSERFVLADIPGLIEGA 221
Query: 229 LSERNEIEKQAILALKYLGNL-----IIYIFDPSEYCGFPLEEQIHLFNEIY-EEFKDMP 282
+ A L ++LG++ +I++ D ++ E I E Y +E D
Sbjct: 222 -------SEGAGLGTRFLGHVERSATLIHLIDATQDDVAGAYETIRGELEAYGDELADKA 274
Query: 283 FLVVINKIDVAEEDKI-RIVEELVKEKGIKFLKISALKGEGVDKVREEITKTLRPLAEKI 341
++ +NKID +E+ + V EL GIK +S + G+GV ++ K +R I
Sbjct: 275 EILALNKIDALDEETLAEKVAELEAVSGIKPRLVSGVSGQGVTELLRAAYKQVR-----I 329
Query: 342 AKEKIEEEL 350
+ +EEE+
Sbjct: 330 RRGDLEEEI 338
>pir||T42036 obg protein - Streptomyces coelicolor >gi|1783290|dbj|BAA13498.1|
(D87915) Obg [Streptomyces coelicolor A3(2)]
>gi|6983737|emb|CAB75376.1| (AL139298) GTP-binding
protein [Streptomyces coelicolor A3(2)]
Length = 478
Score = 73.0 bits (176), Expect = 5e-12
Identities = 61/207 (29%), Positives = 102/207 (48%), Gaps = 24/207 (11%)
Query: 159 DLPVVDLETPTVV---IAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFR 215
DL + LE TV + G+P+ GKS+L+ L+ AKP+IA YPFTT N+G G
Sbjct: 148 DLQDIHLELKTVADVALVGYPSAGKSSLISVLSAAKPKIADYPFTTLVPNLGVVTAGETV 207
Query: 216 YQVIDTPGLLDRPLSERNEIEKQAILALKYLG-----NLIIYIFDPS--EYCGFPLEEQI 268
Y V D PGL+ + L L++L ++++++ D + E PL +
Sbjct: 208 YTVADVPGLIPGASQGKG-------LGLEFLRHVERCSVLVHVLDTATLESERDPLSDLD 260
Query: 269 HLFNEI--YEEFKDMPFLVVINKIDVAE-EDKIRIVEELVKEKGIKFLKISALKGEGVDK 325
+ E+ Y + P +VV+NKIDV + +D +V ++ +G + ++SA+ G+
Sbjct: 261 VIETELREYGGLDNRPRIVVLNKIDVPDGKDLAEMVRPDLEARGYRVFEVSAVAHMGL-- 318
Query: 326 VREEITKTLRPLAEKIAKEKIEEELRR 352
E++ L L + +EE R
Sbjct: 319 --RELSFALAELVATARAARPKEEATR 343
>dbj|BAA13501.1| (D87916) Obg [Streptomyces griseus]
Length = 478
Score = 71.4 bits (172), Expect = 1e-11
Identities = 55/206 (26%), Positives = 106/206 (50%), Gaps = 21/206 (10%)
Query: 162 VVDLETPT-VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVID 220
V++L+T V + G+P+ GKS+L+ L+ AKP+IA YPFTT N+G G Y + D
Sbjct: 153 VLELKTVADVALVGYPSAGKSSLISVLSAAKPKIADYPFTTLVPNLGVVTAGSTVYTIAD 212
Query: 221 TPGLLDRPLSERNEIEKQAILALKYLG-----NLIIYIFDPS--EYCGFPLEEQIHLFNE 273
PGL+ + L L++L ++++++ D + E P+ + + E
Sbjct: 213 VPGLIPGASQGKG-------LGLEFLRHVERCSVLVHVLDTATLESDRDPVSDLDMIEEE 265
Query: 274 --IYEEFKDMPFLVVINKIDVAE-EDKIRIVEELVKEKGIKFLKISALKGEGVDKVREEI 330
+Y ++ P +V +NK+D+ + +D ++ ++ +G + ++SA+ +G+ ++ +
Sbjct: 266 LRLYGGLENRPRIVALNKVDIPDGQDLADMIRPDLEARGYRVFEVSAIAHKGLKELSFAL 325
Query: 331 TKTLRPLAEKIAKEKIEEELRRYRRP 356
+AE A + EE R RP
Sbjct: 326 AGI---IAEARATKPKEEATRIVIRP 348
>gb|AAF52655.1| (AE003621) CG13390 gene product [Drosophila melanogaster]
Length = 381
Score = 69.5 bits (167), Expect = 6e-11
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE-DGYFRYQVIDTPGLLDRP 228
V + G+PN GKSTLL ALT AKP++A Y FTT ++G + D + + + D PGL+ P
Sbjct: 208 VGLIGYPNAGKSTLLNALTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLV--P 265
Query: 229 LSERNEIEKQAILALKYLGNLIIYIFDPSEYCGFPLEEQI-HLFNEIYEEFKDMPFLVVI 287
+ RN+ L L++++ D S + EQ+ H + P LVV
Sbjct: 266 DAHRNKGLGIQFLKHAERCTLLLFVLDASAPEPWTHYEQLMHELRQFGGRLASRPQLVVA 325
Query: 288 NKIDVAEEDKIRIVEELVKEKGIKFLKISALKGEGVDKVREEITK 332
NK+DV E+ EEL + L ISA G + ++ I +
Sbjct: 326 NKLDV--EEGQNNFEELQRRLQNPVLGISAKMGHNLGQLLNSIRR 368
>dbj|BAA91783.1| (AK001603) unnamed protein product [Homo sapiens]
Length = 401
Score = 69.1 bits (166), Expect = 7e-11
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 162 VVDLETPTVVIAG---HPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE-DGYFRYQ 217
V+ LE TV AG PN GKS+LL+A++ A+P +ASYPFTT +VG +G+ +
Sbjct: 216 VLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIA 275
Query: 218 VIDTPGLLDRPLSERNEIEKQAILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEE 277
V D PG++ + +N A L ++++ D S+ + + + E+YE+
Sbjct: 276 VADIPGIIRG--AHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEK 333
Query: 278 -FKDMPFLVVINKIDVAEEDKIRIVEELVKEKGIKFLKISALKGEGVDKV 326
P +V NKID+ E + +L G + + +SAL GE ++++
Sbjct: 334 GLSARPHAIVANKIDLPEAQ--ANLSQLRDHLGQEVIVLSALTGENLEQL 381
>sp|Q57986|FEOB_METJA FERROUS IRON TRANSPORT PROTEIN B HOMOLOG >gi|2127900|pir||F64370
ferrous iron transport protein B - Methanococcus
jannaschii >gi|1591272|gb|AAB98557.1| (U67505) ferrous
iron transport protein B (feoB) [Methanococcus
jannaschii]
Length = 668
Score = 68.7 bits (165), Expect = 1e-10
Identities = 50/167 (29%), Positives = 91/167 (53%), Gaps = 17/167 (10%)
Query: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLDRPL 229
+ + G+PNVGKST+ ALT I ++P T G+FE +++V+D PG+
Sbjct: 6 IALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLTA 65
Query: 230 SERNEIEKQAILALKYLGN----LIIYIFDPSEYCGFPLEEQIHLFNEIYEEFKDMPFLV 285
+ +E I+A Y+ N L++ I D + LE ++L ++ E ++ L+
Sbjct: 66 NSIDE-----IIARDYIINEKPDLVVNIVDAT-----ALERNLYLTLQLMEMGANL--LL 113
Query: 286 VINKIDVAEEDKIRI-VEELVKEKGIKFLKISALKGEGVDKVREEIT 331
+NK+D+A+ I I V++L K G+K + +SA K G++ +++ I+
Sbjct: 114 ALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEDLKKAIS 160
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.140 0.392
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127984974
Number of Sequences: 2977
Number of extensions: 5491729
Number of successful extensions: 22867
Number of sequences better than 1.0e-10: 35
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 22800
Number of HSP's gapped (non-prelim): 39
length of query: 357
length of database: 189,106,746
effective HSP length: 57
effective length of query: 300
effective length of database: 154,992,987
effective search space: 46497896100
effective search space used: 46497896100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)