BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0562 (PAB0562) DE:Hypothetical protein
(229 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75129 hypothetical protein PAB0562 - Pyrococcus abyssi (st... 457 e-128
pir||G71001 probable phosphoesterase (EC 3.1.-.-) PHLF004 - Pyro... 341 5e-93
sp|Q60344|Y037_METJA HYPOTHETICAL PROTEIN MJ0037 >gi|2128091|pir... 146 2e-34
gi|11498755 conserved hypothetical protein [Archaeoglobus fulgid... 131 6e-30
gb|AAK41226.1| Conserved hypothetical protein [Sulfolobus solfat... 129 3e-29
pir||A69108 probable phosphoesterase (EC 3.1.-.-) MTH1803 - Meth... 120 1e-26
pir||E72572 hypothetical protein APE1861 - Aeropyrum pernix (str... 118 7e-26
emb|CAC11677.1| (AL445064) phosphoesterase related protein [Ther... 111 7e-24
pir||B71109 probable phosphoesterase (EC 3.1.-.-) PHAE027 - Pyro... 95 6e-19
gi|11498793 conserved hypothetical protein [Archaeoglobus fulgid... 73 2e-12
>pir||F75129 hypothetical protein PAB0562 - Pyrococcus abyssi (strain Orsay)
>gi|5458262|emb|CAB49751.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 229
Score = 457 bits (1163), Expect = e-128
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MKIKLLPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDTTRRIIERERPKVL 60
MKIKLLPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDTTRRIIERERPKVL
Sbjct: 1 MKIKLLPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDTTRRIIERERPKVL 60
Query: 61 VINGDLKHSFTPLKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESL 120
VINGDLKHSFTPLKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESL
Sbjct: 61 VINGDLKHSFTPLKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESL 120
Query: 121 EIRGWTIAHGHLKVEGGKVIIGHEHPSIRLRDEVGASVKVPVFLKGSNILVLPAFSPWAY 180
EIRGWTIAHGHLKVEGGKVIIGHEHPSIRLRDEVGASVKVPVFLKGSNILVLPAFSPWAY
Sbjct: 121 EIRGWTIAHGHLKVEGGKVIIGHEHPSIRLRDEVGASVKVPVFLKGSNILVLPAFSPWAY 180
Query: 181 GNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDLIRAMRLLG 229
GNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDLIRAMRLLG
Sbjct: 181 GNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDLIRAMRLLG 229
>pir||G71001 probable phosphoesterase (EC 3.1.-.-) PHLF004 - Pyrococcus
horikoshii >gi|3257732|dbj|BAA30415.1| (AP000006) 228aa
long hypothetical protein [Pyrococcus horikoshii]
Length = 228
Score = 341 bits (865), Expect = 5e-93
Identities = 159/228 (69%), Positives = 190/228 (82%)
Query: 1 MKIKLLPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDTTRRIIERERPKVL 60
MKIKLLP KA+V+G +V+AD+HIGFEES Q G+YIPKLLR++I + I E K L
Sbjct: 1 MKIKLLPGKAIVIGKVLVLADIHIGFEESAIQGGMYIPKLLRDVIRDVKSIAMHENAKTL 60
Query: 61 VINGDLKHSFTPLKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESL 120
+INGDLKHSFTPLKREF EVG FLREVKE+VDEV+LVKGNHDTGI WI+++F V+I+ES+
Sbjct: 61 IINGDLKHSFTPLKREFFEVGTFLREVKEVVDEVILVKGNHDTGIEWIKDRFNVDIMESI 120
Query: 121 EIRGWTIAHGHLKVEGGKVIIGHEHPSIRLRDEVGASVKVPVFLKGSNILVLPAFSPWAY 180
EI WTI HGH ++EG K IIGHEHP+IRLRDEVGA VKVPVFL+G +I+VLPAFSPWAY
Sbjct: 121 EIGNWTIVHGHKEIEGNKFIIGHEHPAIRLRDEVGAIVKVPVFLRGEDIIVLPAFSPWAY 180
Query: 181 GNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDLIRAMRLL 228
GNDLT+N PISP+LR D+ NL V+ TTG+ELLNFG+F LI AM+ L
Sbjct: 181 GNDLTLNGPISPILRGKDISNLEVLVTTGDELLNFGRFSQLIEAMKRL 228
>sp|Q60344|Y037_METJA HYPOTHETICAL PROTEIN MJ0037 >gi|2128091|pir||E64304 probable
phosphoesterase (EC 3.1.-.-) MJ0037 - Methanococcus
jannaschii >gi|1498797|gb|AAB98018.1| (U67462) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 238
Score = 146 bits (366), Expect = 2e-34
Identities = 90/232 (38%), Positives = 136/232 (57%), Gaps = 17/232 (7%)
Query: 1 MKIK---LLPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLR-EIIDTTRRIIERER 56
+KIK + ++ +V + +IAD HIGF+ + G P L + E+I T II++ +
Sbjct: 5 LKIKDFYITVDRCLVYKDYAIIADTHIGFDVFFGEGGANFPLLQKDEVIKRTLNIIDKYK 64
Query: 57 PKVLVINGDLKHSFTPLKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEI 116
L+INGD+KH+F P +E + F+ ++E ++ V+L+KGNHDT I+ G EI
Sbjct: 65 INNLIINGDIKHNFKPYPKEIKFLKEFIEFLREYIN-VILIKGNHDTFIS----SAGYEI 119
Query: 117 VESLEIRGWTIAHG--HLKVEGGKV-----IIGHEHPSIRLRDEVGASVKVPVFLKGSNI 169
+ E+ + I HG +K++ + I+GHEHPSI+LRD+VGA +K P +L N
Sbjct: 120 FDYFELGNYLIFHGDKEIKIDRDLLKEKFWILGHEHPSIKLRDDVGAILKFPTYLLNKNY 179
Query: 170 LVLPAFSPWAYGNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDL 221
+VLPAF+P + GNDL N S +++ LE V+A T LLNFG DL
Sbjct: 180 IVLPAFNPLSPGNDLINNSASSKIIKKSYLE-AEVIAITDIGLLNFGTLRDL 230
>gi|11498755 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7428108|pir||B69394 probable phosphoesterase (EC
3.1.-.-) AF1155 - Archaeoglobus fulgidus
>gi|2649433|gb|AAB90090.1| (AE001024) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 222
Score = 131 bits (327), Expect = 6e-30
Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 10/222 (4%)
Query: 3 IKLLPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKL-LREIIDTTRRIIERERPKVLV 61
+ L PE+A ++GN VIADLH+GFE + + G +P++ + EI I+E+ +V
Sbjct: 4 VLLTPERAAIVGNTAVIADLHLGFENVLQERGYAVPRMQVEEIKARVASIVEKYGIAKIV 63
Query: 62 INGDLKHSFTP-LKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESL 120
+ GDLKH F+ L E+ +V F+ V E+ +V+GNHD + I ++G+E+ ES+
Sbjct: 64 VAGDLKHEFSKNLPYEWEDVREFIESVNV---ELEVVRGNHDNYLAAILAEYGIELKESV 120
Query: 121 EIRGWTIAHGHLKVEGGKVIIGHEHPSIRLRDEVGASVKVPVFLKGSNI-LVLPAFSPWA 179
+ + + HGH E KVI+GHEHP++++R GA P +L +VLPAFSP
Sbjct: 121 RVGDYLVVHGHKDCEEEKVIMGHEHPAVKVRVR-GALYTFPCYLVADGAKIVLPAFSPLM 179
Query: 180 YGNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDL 221
G+D+ +SP+L+ + V A EE++ G DL
Sbjct: 180 SGSDVLQGNFLSPILQK--ARKIEVYAIE-EEVVYLGSIEDL 218
>gb|AAK41226.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 251
Score = 129 bits (321), Expect = 3e-29
Identities = 74/194 (38%), Positives = 119/194 (61%), Gaps = 13/194 (6%)
Query: 6 LPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDT-TRRIIERERPKVLVING 64
LP V N++V++D+HIG+EE ++++G+YIP++ ++ T T R++ K L++NG
Sbjct: 14 LPALYVKQANSVVLSDVHIGYEEEMSRKGIYIPRIQKKRFFTITNRVLSVFNTKKLIVNG 73
Query: 65 DLKHSFTPLKR-EFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKF-GVEIVESLEI 122
D KH+F L R E E+ L+ +K+ EV +V+GNHD I+ + E+F V++V+ L++
Sbjct: 74 DFKHTFEKLTRQEKEELNEILKYLKDNGVEVTIVRGNHDNYISLVTERFDNVKLVDELDL 133
Query: 123 RGWTIAHGHLKVE---GGKVIIGHEHPSIRLRDEVGASVKVPVFL-------KGSNILVL 172
I HGH VE IIGHEHP I +RD++G S K+ FL + S ++VL
Sbjct: 134 GEILITHGHKVVEPRNNTTYIIGHEHPRISIRDKLGFSRKLQCFLSIPIKERENSQVIVL 193
Query: 173 PAFSPWAYGNDLTV 186
PA + GND+++
Sbjct: 194 PAIGIYQAGNDISL 207
>pir||A69108 probable phosphoesterase (EC 3.1.-.-) MTH1803 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622935|gb|AAB86269.1| (AE000934) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 247
Score = 120 bits (299), Expect = 1e-26
Identities = 73/230 (31%), Positives = 129/230 (55%), Gaps = 12/230 (5%)
Query: 10 AVVLGNAMVIADLHIGFEESVAQEGVYIPKL-LREIIDTTRRIIERERPKVLVINGDLKH 68
++++ ++MVIADLH+G+E+ + +GV +P R II+ I + ++INGDLKH
Sbjct: 16 SLIIEDSMVIADLHLGYEQYLNTQGVMVPGFQFRRIIERIDAIRDVSGASGIIINGDLKH 75
Query: 69 SFTPLK-REFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESLEIRGWTI 127
F + +E E+ ++ ++E ++ +++GNHD I ++ + + + E+L+I + +
Sbjct: 76 EFGRVSWQENREIIRMMQYLEENFRDITIIRGNHDALIPYMSQVSHLSVTETLKISCFLL 135
Query: 128 AHGHL---KVEGGKVIIGHEHPSIRLRDEVGASV-KVPVFLKGS----NILVLPAFSPWA 179
AHGH+ ++ +IIGHEHP + LR G V K+ FL G +LV+P+F+
Sbjct: 136 AHGHVVPEDLDAETIIIGHEHPCVGLRS--GERVEKIKCFLLGPFRDMKLLVMPSFNFVT 193
Query: 180 YGNDLTVNEPISPVLRNFDLENLSVVATTGEELLNFGKFGDLIRAMRLLG 229
G+D+ + +SP LR +L V E+ FG GDL++ + G
Sbjct: 194 EGSDILHEDILSPFLRESELTEFLVYGVEDFEIFEFGTVGDLLKFQQKTG 243
>pir||E72572 hypothetical protein APE1861 - Aeropyrum pernix (strain K1)
>gi|5105553|dbj|BAA80866.1| (AP000062) 262aa long
hypothetical protein [Aeropyrum pernix]
Length = 262
Score = 118 bits (292), Expect = 7e-26
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 15/195 (7%)
Query: 15 NAMVIADLHIGFEESVAQEGVYIPKL-LREIIDTTRRIIERERPKVLVINGDLKHSFTP- 72
+ ++ +DLH+G+E+++A+ GV++P++ LR I T R++ +PK VI GD+KH+F
Sbjct: 36 STILFSDLHLGYEQAMAEAGVFLPRVQLRRAILTLDRVVMGLKPKKAVIVGDIKHAFDRL 95
Query: 73 LKREFLEVGAFLREVKEL-VDEVVLVKGNHDTGINWIREKFGVEIVES-LEI-RGWTIAH 129
LK+E LE L + VD+V++++GNHD I + K G E VE L++ +G H
Sbjct: 96 LKQEALETAKLLEWLSSRGVDKVIVIRGNHDNYIPGVVTKSGGEFVEDYLDVDKGIVAVH 155
Query: 130 GHLKVE--GGKVIIGHEHPSIRLRDEVGASVKVPVFL-----KGSNILVLPAFSPWAYGN 182
GH K E +IIGHEHP+I++ + G+ VK P FL G I+VLPA + GN
Sbjct: 156 GHKKAEFDADIIIIGHEHPAIKI-NVAGSRVKYPAFLIVPREDGGTIVVLPALGVYQTGN 214
Query: 183 DLTVNEP--ISPVLR 195
+T++ +SP +R
Sbjct: 215 PVTLDRSLYLSPYIR 229
>emb|CAC11677.1| (AL445064) phosphoesterase related protein [Thermoplasma
acidophilum]
Length = 230
Score = 111 bits (275), Expect = 7e-24
Identities = 71/216 (32%), Positives = 121/216 (55%), Gaps = 12/216 (5%)
Query: 16 AMVIADLHIGFEESVAQEGVYIPKLLREIIDTTR-RIIERERPKVLVINGDLKHSFTP-L 73
A+V++DLH+G+EE + G+++P++ R+ I + RIIER P+ ++INGD K F+ L
Sbjct: 6 AVVVSDLHLGYEEEMNLHGLFLPRIQRDHITSVMDRIIERYNPQRIIINGDFKQEFSKNL 65
Query: 74 KREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESLEIRGWTIAHGHLK 133
E+ +V F+ + +++ ++GNHD + I K + +++ E + I HG
Sbjct: 66 PSEWTDVLYFIDRYDDR--DLIFIRGNHDNYLATILSKKNIGMMDFYEDDRYFIYHGDRN 123
Query: 134 VEGGKV-IIGHEHPSIRLRDEVGASVKVPVFLKG--SNILVLPAFSPWAYGNDLTVN--- 187
+ K+ I+GHEHPS+ LRD VG K+P F N+++ P+ S ++ G DL+ +
Sbjct: 124 MGIKKITILGHEHPSLVLRDRVGGVYKLPAFAFNFRRNVIITPSMSFFSSGTDLSQSLLS 183
Query: 188 -EPISPVLRNFDLENLSVVATTGE-ELLNFGKFGDL 221
E +P L+ + A T E L++FG DL
Sbjct: 184 EEHFTPALKGMKPSCFRIFAITDEFGLVDFGYLDDL 219
>pir||B71109 probable phosphoesterase (EC 3.1.-.-) PHAE027 - Pyrococcus
horikoshii >gi|3257049|dbj|BAA29732.1| (AP000003) 213aa
long hypothetical protein [Pyrococcus horikoshii]
Length = 213
Score = 95.2 bits (233), Expect = 6e-19
Identities = 66/192 (34%), Positives = 98/192 (50%), Gaps = 18/192 (9%)
Query: 13 LGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDTTRRIIERERPKVLVINGDLKHSFTP 72
LG +V AD H+GFE G+ + L + + I E+P ++I GD+K
Sbjct: 15 LGKTLVFADPHLGFERF---RGINVRSKLEIKL---AKFINEEKPDAVIILGDVKEDIGL 68
Query: 73 LK---REFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKF-GVEIVESLEIRGWTIA 128
K + L+ + LR+V +V++ KGNHD I + KF V +VE +G
Sbjct: 69 SKFTEKILLDFFSLLRDV-----QVIITKGNHDGKIEEVTTKFENVNVVEFFLDKGLLFV 123
Query: 129 HGHLK---VEGGKVIIGHEHPSIRLRDEVGASVKVPVFLKGSNILVLPAFSPWAYGNDLT 185
HGH V+ KVI+GH HPSI + E G KV FL+ S+ILV P +P+ G +
Sbjct: 124 HGHKNLPNVKFKKVIMGHIHPSILISTESGVRRKVKCFLRTSDILVFPTINPFYEGINFR 183
Query: 186 VNEPISPVLRNF 197
+SP+L+N+
Sbjct: 184 DGIKMSPILKNY 195
>gi|11498793 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7428110|pir||H69398 probable phosphoesterase (EC
3.1.-.-) AF1193 - Archaeoglobus fulgidus
>gi|2649393|gb|AAB90052.1| (AE001022) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 193
Score = 73.4 bits (177), Expect = 2e-12
Identities = 60/219 (27%), Positives = 101/219 (45%), Gaps = 37/219 (16%)
Query: 6 LPEKAVVLGNAMVIADLHIGFEESVAQEGVYIPKLLREIIDTTRRIIERERPKVLVINGD 65
+ E + +G VIAD+H+G Y +L+ + + R+ + L++ GD
Sbjct: 3 IEEDVLFIGRKAVIADIHLGLVRH------YDNELIEKALSIAERV------EALIVAGD 50
Query: 66 LKHSFTPLKREFLEVGAFLREVKELVDEVVLVKGNHDTGINWIREKFGVEIVESLEIRGW 125
LKH E F+RE+ E+ D ++L++GNHD G++ +S+ I +
Sbjct: 51 LKHIGKKGLHE-----RFIREIGEVTD-LILIRGNHDIGLSG---------EKSIRIGKY 95
Query: 126 TIAHGHL----KVEGGKVII-GHEHPSIRLRDEVGASVKVPVFLKG----SNILVLPAFS 176
I HGH +V KV+I GH HP+ ++D G + VFL G ++VLPAF+
Sbjct: 96 GIFHGHAVPDEEVLDAKVLIFGHAHPAYFVKDSAG-GYRERVFLTGEVEDKRVVVLPAFN 154
Query: 177 PWAYGNDLTVNEPISPVLRNFDLENLSVVATTGEELLNF 215
+ ++ P + R +D + + G L F
Sbjct: 155 DLCASTAVNLDRPAGFMFRRYDYKRWYAIMLDGTLLRIF 193
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.143 0.412
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84200603
Number of Sequences: 2977
Number of extensions: 3587109
Number of successful extensions: 8019
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7985
Number of HSP's gapped (non-prelim): 10
length of query: 229
length of database: 189,106,746
effective HSP length: 53
effective length of query: 176
effective length of database: 157,386,935
effective search space: 27700100560
effective search space used: 27700100560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)