BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0568 (aif2A) DE:translation initiation factor aIF-2, subunit
alpha (aif2A)
         (275 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9V0E4|IF2A_PYRAB PROBABLE TRANSLATION INITIATION FACTOR 2 AL...   552  e-156
sp|O58655|IF2A_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 AL...   538  e-152
sp|Q57581|IF2A_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 AL...   274  7e-73
sp|O27363|IF2A_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 AL...   249  4e-65
gi|11498138 translation initiation factor eIF-2, subunit alpha (...   215  3e-55
gb|AAK41314.1| Translation initiation factor aif-2 (eiF2A) [Sulf...   189  4e-47
sp|Q9YF02|IF2A_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 AL...   177  1e-43
emb|CAC12328.1| (AL445066) translation initiation factor eIF-2, ...   175  5e-43
pir||F72737 probable translation initiation factor aIF-2 alpha c...   164  1e-39
gb|AAG19070.1| (AE005006) translation initiation factor eIF-2 su...   163  2e-39
gi|6322466 Translation initiation factor eIF-2 alpha subunit; Su...   125  4e-28
sp|P56286|IF2A_SCHPO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ...   107  2e-22
gb|AAG37960.1| (AC087079) Hypothetical protein Y37E3.p [Caenorha...    90  2e-17
dbj|BAB11536.1| (AB005241) eukaryotic translation initiation fac...    89  6e-17
sp|P41374|IF2A_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ...    85  6e-16
gb|AAD25944.1|AF085279_17 (AF085279) hypothetical EIF-2-Alpha [A...    84  1e-15
gb|AAF68997.1|AF257517_1 (AF257517) eIF2 alpha subunit [Danio re...    83  3e-15
gi|4758256 eukaryotic translation initiation factor 2, subunit 1...    82  6e-15
gi|9506571 eukaryotic translation initiation factor 2, subunit 1...    82  1e-14
gb|AAF43476.1|AC012381_12 (AC012381) Elongation Initiation Facto...    78  1e-13
prf||1710307A initiation factor 2 [Artemia sp.]                        76  6e-13
dbj|BAB06126.1| (AP001515) polynucleotide phosphorylase [Bacillu...    68  9e-11

>sp|Q9V0E4|IF2A_PYRAB PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|7443485|pir||G75130 translation
           initiation factor aif-2, subun it alpha (aif2a) PAB0568
           - Pyrococcus abyssi (strain Orsay)
           >gi|5458271|emb|CAB49760.1| (AJ248285) translation
           initiation factor aIF-2, subun it alpha (aif2A)
           [Pyrococcus abyssi]
           Length = 275
           
 Score =  552 bits (1408), Expect = e-156
 Identities = 275/275 (100%), Positives = 275/275 (100%)

Query: 1   MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
           MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE
Sbjct: 1   MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60

Query: 61  GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
           GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET
Sbjct: 61  GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120

Query: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
           AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA
Sbjct: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180

Query: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
           EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL
Sbjct: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240

Query: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK 275
           ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK
Sbjct: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK 275


>sp|O58655|IF2A_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|7443481|pir||D71087 probable
           translation initiation factor eIF-2 alpha chain -
           Pyrococcus horikoshii >gi|3257375|dbj|BAA30058.1|
           (AP000004) 275aa long hypothetical translation
           initiation factor eIF-2 alpha chain [Pyrococcus
           horikoshii]
           Length = 275
           
 Score =  538 bits (1371), Expect = e-152
 Identities = 264/275 (96%), Positives = 272/275 (98%)

Query: 1   MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
           MPR+AREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE
Sbjct: 1   MPRKAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60

Query: 61  GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
           GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLL+LAAEKLGKDFE 
Sbjct: 61  GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLRLAAEKLGKDFEA 120

Query: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
           AWREVWVPLEEEWGEVYAAFEDAAKDGI+VLKGHVPDEWLPVLKEI++NYVEVPTVTIDA
Sbjct: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIEVLKGHVPDEWLPVLKEIVENYVEVPTVTIDA 180

Query: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
           EFEITVPKPNGVEIIKEALIRARDRANKEKD+EVKFTY GAPRYRIDITAPDYYKAEEVL
Sbjct: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDIEVKFTYQGAPRYRIDITAPDYYKAEEVL 240

Query: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK 275
           E IAEEILRVIK+AGGEATLLRKEKRI+KVKKRKK
Sbjct: 241 EDIAEEILRVIKQAGGEATLLRKEKRIRKVKKRKK 275


>sp|Q57581|IF2A_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|2129323|pir||E64314 translation
           initiation factor aIF-2 alpha chain - Methanococcus
           jannaschii >gi|1592263|gb|AAB98098.1| (U67469)
           translation initiation factor aIF-2, subunit alpha
           (aif2A) [Methanococcus jannaschii]
           Length = 266
           
 Score =  274 bits (694), Expect = 7e-73
 Identities = 137/262 (52%), Positives = 187/262 (71%), Gaps = 2/262 (0%)

Query: 6   REYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVV 65
           RE+PEEG+ V+ TVK +  YGAF+EL EYPGKE  +HISEV S WV+NIRD++K GQ+VV
Sbjct: 6   REFPEEGDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVV 65

Query: 66  AKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREV 125
           AKV+RVD RKGHIDLSL+RVT+QQ++AK+QE+KR Q+A  +L+ AAEKLGK  E AW EV
Sbjct: 66  AKVLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEV 125

Query: 126 WVPLEEEWGEVYAAFEDAAKDGIDVLKG-HVPDEWLPVLKEIIDNYVEVPTVTIDAEFEI 184
              LE+E+GE+Y AFE    +G +VL    + +EW  VL E+    +E+  V ++   E+
Sbjct: 126 GYLLEDEFGELYNAFETMVIEGKEVLDDLEISEEWKNVLYEVAKESIELTNVEVEGVIEM 185

Query: 185 TVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIA 244
               P+G++ IK+AL  A  +AN  +DVEVK TY+GAP+YR+ + APDY   EEV + + 
Sbjct: 186 KSYAPDGIKQIKKALTTAL-KANPYEDVEVKITYIGAPKYRVVVIAPDYKSGEEVFKKVC 244

Query: 245 EEILRVIKEAGGEATLLRKEKR 266
           E+ +  IK+ GGE T  R+ K+
Sbjct: 245 EKAVATIKKLGGEGTYYRESKK 266


>sp|O27363|IF2A_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|7443482|pir||G69040 translation
           initiation factor eIF-2, alpha subunit -
           Methanobacterium thermoautotrophicum (strain Delta H)
           >gi|2622413|gb|AAB85786.1| (AE000895) translation
           initiation factor eIF-2, alpha subunit
           [Methanobacterium thermoautotrophicum]
           Length = 262
           
 Score =  249 bits (628), Expect = 4e-65
 Identities = 123/264 (46%), Positives = 181/264 (67%), Gaps = 8/264 (3%)

Query: 1   MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
           M RR  E+PEEGE VV TV ++ NYGAF  L+EYPGKEAF+HISEV+S WV+NIRD+++E
Sbjct: 4   MVRRKNEWPEEGELVVGTVHKVLNYGAFATLEEYPGKEAFIHISEVSSGWVKNIRDFVRE 63

Query: 61  GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
            QK+VA+V+RV+PRKGH+D+S++R+ + QR  K+Q +K  QKAE  L+LAA  LGKD +T
Sbjct: 64  NQKIVARVLRVNPRKGHVDVSMKRIREDQRTKKIQAWKIEQKAEKFLELAARDLGKDLDT 123

Query: 121 AWREVWVPLEEEWGEVYAAFEDAAKDG-IDVLKGHVPDEWLPVLKEIIDNYVEVPTVTID 179
           A+ EV   L + +G++Y AFE AA++G   +++  VP++W  V+ E+    +  P V I 
Sbjct: 124 AYEEVGYELMDIFGDLYGAFETAAEEGEKSLIEEGVPEDWAAVITEVAKRNITPPEVQIT 183

Query: 180 AEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEV 239
              +I    PNGVEII++AL  A+D         +    +GAPRYR+ + + DY KAE+ 
Sbjct: 184 GYVDIKSYAPNGVEIIRKALKSAQDEG-------ITVQAVGAPRYRLIVKSTDYLKAEKQ 236

Query: 240 LESIAEEILRVIKEAGGEATLLRK 263
           L+  A++ + ++++ GGE   LR+
Sbjct: 237 LKEAAQKCIEIVEKEGGEGEFLRE 260


>gi|11498138 translation initiation factor eIF-2, subunit alpha (eif2A)
           [Archaeoglobus fulgidus]
           >gi|3122240|sp|O29723|IF2A_ARCFU PROBABLE TRANSLATION
           INITIATION FACTOR 2 ALPHA SUBUNIT (EIF-2-ALPHA)
           >gi|7443483|pir||G69315 translation initiation factor
           eIF-2, subunit alpha (eif2A) homolog - Archaeoglobus
           fulgidus >gi|2650097|gb|AAB90710.1| (AE001068)
           translation initiation factor eIF-2, subunit alpha
           (eif2A) [Archaeoglobus fulgidus]
           Length = 267
           
 Score =  215 bits (543), Expect = 3e-55
 Identities = 109/256 (42%), Positives = 169/256 (65%), Gaps = 3/256 (1%)

Query: 8   YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
           YP +GE V+ TVKR+ ++GAF+ LDEY G+E  +HISEVAS W+++IR+++K+GQKV+ K
Sbjct: 13  YPSKGEIVIGTVKRVLDFGAFVSLDEYEGREGMVHISEVASGWIKDIREHVKKGQKVICK 72

Query: 68  VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWV 127
           V+ V+P++GHIDLS++ V ++QR+ KLQ++K   KA   L++  EKL  DF+    ++  
Sbjct: 73  VLDVNPKRGHIDLSIKDVNERQRREKLQQWKNEMKAFKWLEIIGEKLNIDFKEL-EKIGK 131

Query: 128 PLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVP 187
            L +E+  VY+AFE+AA +G +VL   V +E+   + EI    ++   V +   FE+   
Sbjct: 132 KLMKEYDSVYSAFEEAAFEGYEVLAPIVGEEFAKEMAEIARENIKPKRVKVRGYFELKSS 191

Query: 188 KPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEI 247
             +G+E IK+AL+ A+        VE+K  Y+GAP+YRI + A DY  AE VL+   E +
Sbjct: 192 ASDGIERIKKALLEAKKAL--VNGVEMKLEYVGAPKYRIVVEADDYKTAENVLKKATENV 249

Query: 248 LRVIKEAGGEATLLRK 263
           L+ IK+ GGE   +R+
Sbjct: 250 LKAIKKLGGEGNFIRE 265


>gb|AAK41314.1| Translation initiation factor aif-2 (eiF2A) [Sulfolobus
           solfataricus]
           Length = 266
           
 Score =  189 bits (474), Expect = 4e-47
 Identities = 100/260 (38%), Positives = 161/260 (61%), Gaps = 7/260 (2%)

Query: 9   PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKV 68
           P EGE ++ATVK++ +YG+++ LDEY G +AF+  SEV+S WV+NIRD LKE +KV+ KV
Sbjct: 9   PSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENRKVIVKV 68

Query: 69  IRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVP 128
           IRVD RKG +D+SL++VT  +R+ K  ++K+ Q+ + +L+L ++KL    + AW +V   
Sbjct: 69  IRVDRRKGTVDVSLKKVTDDERRKKNLQWKKIQRLDKILELVSQKLKLSEKDAWEQVAWK 128

Query: 129 LEEEWGEVYAAFEDAAKDGIDVL-KGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVP 187
           LE ++G+   A E A K+G  +L    VP+ W+  L E    + E   V +     +   
Sbjct: 129 LEAKYGDPITAIEKAVKEGEKILIDAGVPEIWVKPLLEEASKHAEERKVKMSGLITVRTN 188

Query: 188 KPNGVEIIKEALIRARDRANKEKDVE----VKFTYLGAPRYRIDITAPDYYKAEEVLESI 243
           +P GVE IKE + +A +  N E+D E    +K   +GAPRYR+D+   +  +A E L  I
Sbjct: 189 EPLGVEKIKEVISKALE--NIEQDYESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQI 246

Query: 244 AEEILRVIKEAGGEATLLRK 263
              ++++ KE   + ++++K
Sbjct: 247 ISNLIKIGKEENVDISVVKK 266


>sp|Q9YF02|IF2A_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA)
           Length = 266
           
 Score =  177 bits (445), Expect = 1e-43
 Identities = 102/259 (39%), Positives = 151/259 (57%), Gaps = 3/259 (1%)

Query: 9   PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKV 68
           P+ GE VV TV+ +H+YGA+L LDEY G  AF+  SE+AS  VRNI   LK  QKVV KV
Sbjct: 8   PDVGEIVVGTVQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKV 67

Query: 69  IRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVP 128
           IRV  ++G +D+SL+RV   ++K K+  +KR  KA  L++L AEKLGK  + A+REV   
Sbjct: 68  IRVYKKRGQVDVSLKRVMDSEKKRKMMFYKRYLKAATLVELIAEKLGKSVDEAYREVLWK 127

Query: 129 LEEEWGEVYAAFEDAAKDGIDVL-KGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVP 187
           LE+ +G+     E A   G + L K  VP+EW+  L E    +V V TV I     +   
Sbjct: 128 LEDAYGDPMKGLEAAVLQGREALEKAGVPEEWIEPLLETAKTHVRVKTVKITFYLTLRSM 187

Query: 188 KPNGVEIIKEALIRARDRANKEKDVEV--KFTYLGAPRYRIDITAPDYYKAEEVLESIAE 245
             +GVE +++ L  A+ +    KD +V  +   +GAP+YR+++   +Y   E+ LE + E
Sbjct: 188 AGDGVERVRKVLEAAKSQIESFKDSKVVARIYTVGAPKYRVELQGYNYKTLEKALEKMVE 247

Query: 246 EILRVIKEAGGEATLLRKE 264
              +   + G E +  R++
Sbjct: 248 AARKTASKLGVEFSFERED 266


>emb|CAC12328.1| (AL445066) translation initiation factor eIF-2, alpha subunit
           related protein [Thermoplasma acidophilum]
           Length = 254
           
 Score =  175 bits (439), Expect = 5e-43
 Identities = 94/237 (39%), Positives = 142/237 (59%), Gaps = 7/237 (2%)

Query: 9   PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKV 68
           P+ G+ VV  +  + N+GA   L+EYPG E ++HISEVA+ WV++IR YL+EGQ+VV KV
Sbjct: 7   PDNGDLVVVKITEVKNFGANGVLEEYPGVEGYIHISEVATGWVKHIRSYLREGQRVVCKV 66

Query: 69  IRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVP 128
           I V+P +  +DLSL+RV Q Q + K+ E+K  QKA+ L ++   +L ++ E    +    
Sbjct: 67  IGVNPERKVVDLSLKRVNQHQSREKIAEWKNEQKADKLFEIVCSRLNRNPEECKEQFGRR 126

Query: 129 LEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVPK 188
           L E +G ++AAFE AA+   + L   +  +W  V  EI    + +P V++   FE+    
Sbjct: 127 LVELFGTLFAAFESAAQSNGEWLP-EMNGDWKNVFVEIAKENITIPEVSVSGYFEVYSLA 185

Query: 189 PNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAE 245
            +GVE IKE L    D        +V+  Y+GAPRYRI +   DY KAEE+L+ + +
Sbjct: 186 SDGVERIKEVLTIPEDTG------KVELEYVGAPRYRIVVKDKDYKKAEEILKKVVQ 236


>pir||F72737 probable translation initiation factor aIF-2 alpha chain APE0436
           [imported] - Aeropyrum pernix (strain K1)
           >gi|5104078|dbj|BAA79394.1| (AP000059) 249aa long
           hypothetical eukaryotic translation initiation factor
           eIF-2 alpha chain [Aeropyrum pernix]
           Length = 249
           
 Score =  164 bits (411), Expect = 1e-39
 Identities = 95/249 (38%), Positives = 144/249 (57%), Gaps = 3/249 (1%)

Query: 19  VKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHI 78
           ++ +H+YGA+L LDEY G  AF+  SE+AS  VRNI   LK  QKVV KVIRV  ++G +
Sbjct: 1   MQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKVIRVYKKRGQV 60

Query: 79  DLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVPLEEEWGEVYA 138
           D+SL+RV   ++K K+  +KR  KA  L++L AEKLGK  + A+REV   LE+ +G+   
Sbjct: 61  DVSLKRVMDSEKKRKMMFYKRYLKAATLVELIAEKLGKSVDEAYREVLWKLEDAYGDPMK 120

Query: 139 AFEDAAKDGIDVL-KGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVPKPNGVEIIKE 197
             E A   G + L K  VP+EW+  L E    +V V TV I     +     +GVE +++
Sbjct: 121 GLEAAVLQGREALEKAGVPEEWIEPLLETAKTHVRVKTVKITFYLTLRSMAGDGVERVRK 180

Query: 198 ALIRARDRANKEKDVEV--KFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAG 255
            L  A+ +    KD +V  +   +GAP+YR+++   +Y   E+ LE + E   +   + G
Sbjct: 181 VLEAAKSQIESFKDSKVVARIYTVGAPKYRVELQGYNYKTLEKALEKMVEAARKTASKLG 240

Query: 256 GEATLLRKE 264
            E +  R++
Sbjct: 241 VEFSFERED 249


>gb|AAG19070.1| (AE005006) translation initiation factor eIF-2 subunit alpha; Eif2a
           [Halobacterium sp. NRC-1]
           Length = 267
           
 Score =  163 bits (408), Expect = 2e-39
 Identities = 92/260 (35%), Positives = 143/260 (54%), Gaps = 5/260 (1%)

Query: 8   YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
           +P+EGE VV  V  I ++G F++L++Y  K   +H+SEVAS W++N+RD++ E Q VVAK
Sbjct: 6   WPDEGELVVGKVDDIEDFGVFVDLEQYQDKRGLVHVSEVASGWIKNVRDHVNEDQTVVAK 65

Query: 68  VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDF-ETAWREVW 126
           V+ VD     IDLSL+ V   Q    +QE+K  QKA+  L LA    G+D  +  +R + 
Sbjct: 66  VLGVDESAQQIDLSLKDVNDHQHSDTIQEWKNEQKADKWLTLA---FGEDMADDQFRRIA 122

Query: 127 VPLEEEWGEVYAAFEDAAKDGIDVLKG-HVPDEWLPVLKEIIDNYVEVPTVTIDAEFEIT 185
             L  ++G +Y  FE AA  G + L    + D+ +  + E   + V VP VT+     + 
Sbjct: 123 NGLLADFGSLYDGFEQAAIHGHEALADTALEDDEIDAIVETARDNVSVPYVTVTGYVSLQ 182

Query: 186 VPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAE 245
            P  +GV+ IK+AL  A        +V++  TY+GAP YR+ + AP+Y  AE  LE+  +
Sbjct: 183 SPDGDGVDTIKDALQAAEGNGEVPDEVDLDVTYVGAPEYRLRVQAPNYKTAESALEAAGD 242

Query: 246 EILRVIKEAGGEATLLRKEK 265
             +  +    G     R+ +
Sbjct: 243 RAVDSVTAHDGSGAFHRERQ 262


>gi|6322466 Translation initiation factor eIF-2 alpha subunit; Sui2p
           [Saccharomyces cerevisiae]
           >gi|124203|sp|P20459|IF2A_YEAST EUKARYOTIC TRANSLATION
           INITIATION FACTOR 2 ALPHA SUBUNIT (EIF-2-ALPHA)
           >gi|101413|pir||A32108 translation initiation factor
           eIF-2 alpha chain - yeast  (Saccharomyces cerevisiae)
           >gi|854580|emb|CAA60929.1| (X87611) translation
           initiation factor [Saccharomyces cerevisiae]
           >gi|903889|gb|AAA70332.1| (M25552) translation
           initiation factor 2 alpha subunit [Saccharomyces
           cerevisiae] >gi|1015632|emb|CAA89529.1| (Z49507) ORF
           YJR007w [Saccharomyces cerevisiae]
           Length = 304
           
 Score =  125 bits (312), Expect = 4e-28
 Identities = 82/266 (30%), Positives = 140/266 (51%), Gaps = 11/266 (4%)

Query: 7   EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
           +YPE  + V+  V++I   GA+++L EY   E  + +SE++   +R+I+  ++ G+  VA
Sbjct: 12  KYPEIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKNDVA 71

Query: 67  KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVW 126
            V+RVD  KG+IDLS RRV+ +      +++++++   ++L+  AEK     E  ++ + 
Sbjct: 72  VVLRVDKEKGYIDLSKRRVSSEDIIKCEEKYQKSKTVHSILRYCAEKFQIPLEELYKTIA 131

Query: 127 VPLEEEWGEVYAAF-----EDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAE 181
            PL  ++G  Y AF     ++   +GI+     V DE    LK  I   +    V I A+
Sbjct: 132 WPLSRKFGHAYEAFKLSIIDETVWEGIEPPSKDVLDE----LKNYISKRLTPQAVKIRAD 187

Query: 182 FEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLE 241
            E++     G++ IK+AL  A D + ++  V+VK   + AP Y +   A D  K  E LE
Sbjct: 188 VEVSCFSYEGIDAIKDALKSAEDMSTEQMQVKVKL--VAAPLYVLTTQALDKQKGIEQLE 245

Query: 242 SIAEEILRVIKEAGGEATLLRKEKRI 267
           S  E+I  VI + GG   +    K +
Sbjct: 246 SAIEKITEVITKYGGVCNITMPPKAV 271


>sp|P56286|IF2A_SCHPO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|7443486|pir||T11645 translation
           initiation factor eIF-2 alpha chain - fission yeast
           (Schizosaccharomyces pombe) >gi|2706460|emb|CAA15918.1|
           (AL021046) eukaryotic translation initiation factor 2
           alpha subunit [Schizosaccharomyces pombe]
           Length = 306
           
 Score =  107 bits (264), Expect = 2e-22
 Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 6/265 (2%)

Query: 8   YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
           +PE  E VV  V++I   GA+++L EY   E  + +SE++   +R+++ +++ G+  V  
Sbjct: 13  FPEVDELVVVNVRQIQEMGAYVKLLEYDNIEGMVLLSELSRRRIRSVQKHIRVGRNEVVV 72

Query: 68  VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWV 127
           V+RVD  KG+IDLS RRV+ +      + F +++   ++++  AEK     ET +  +  
Sbjct: 73  VLRVDKEKGYIDLSKRRVSPEDVVKCEERFNKSKAVHSIMRHIAEKHNVPLETMYTTIGW 132

Query: 128 PLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEI---IDNYVEVPTVTIDAEFEI 184
           PL  ++G  Y AF+ A  +   V +G  P +   V+ ++   I   +    + I A+ E+
Sbjct: 133 PLYRKYGHAYDAFKLAISNPDHVFEGLEPPK-SGVINDLLAQISRRLTPQPIKIRADVEV 191

Query: 185 TVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIA 244
           T     G+  IK AL  A D   +E  ++VK   +  P Y +   A D     + LE   
Sbjct: 192 TCFGYEGINAIKAALKAAEDVHTEEVPIKVKL--VAPPLYVLLTNALDKSLGLKKLEEAI 249

Query: 245 EEILRVIKEAGGEATLLRKEKRIKK 269
             I + I  + G  T+  K K + +
Sbjct: 250 GAIEKSITASNGTCTVKMKPKAVSE 274


>gb|AAG37960.1| (AC087079) Hypothetical protein Y37E3.p [Caenorhabditis elegans]
           Length = 421
           
 Score = 90.5 bits (221), Expect = 2e-17
 Identities = 65/219 (29%), Positives = 113/219 (50%), Gaps = 11/219 (5%)

Query: 7   EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
           ++P+  E VVA VK I + GA++ L EY  KE  + +SE++   +R++   ++ G+    
Sbjct: 31  QFPDVEETVVANVKMIADMGAYVRLSEYNDKEGMILLSELSRRRIRSVNKLIRVGRSESV 90

Query: 67  KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLG-------KDF- 118
            VIRVD  KG+IDLS RRV Q+  K   + F  A+   ++L+  AE++G       +D  
Sbjct: 91  VVIRVDKDKGYIDLSKRRVYQKDLKQCDERFANAKMVNSILRHVAEQVGYTTDEELEDLY 150

Query: 119 -ETAWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVT 177
            +TAW   +   E+     Y AF+ A  +   + +  +  +    L E I   +    V 
Sbjct: 151 QKTAWH--FDRKEKRKAASYDAFKKAITEPTILDECDISADIKEKLLEDIRKKLTPQAVK 208

Query: 178 IDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKF 216
           I A+ E++    +G++ +K ALI  ++ +N    ++V F
Sbjct: 209 IRADIEVSCFDYDGIDAVKAALIAGKNCSNGTFPIKVSF 247


>dbj|BAB11536.1| (AB005241) eukaryotic translation initiation factor 2 alpha
           subunit-like protein [Arabidopsis thaliana]
           Length = 344
           
 Score = 88.9 bits (217), Expect = 6e-17
 Identities = 72/272 (26%), Positives = 128/272 (46%), Gaps = 26/272 (9%)

Query: 8   YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
           YP+    V+  VK I + GA++ L EY   E  +  SE++   +R+I   +K G+     
Sbjct: 17  YPDVDMAVMIQVKTIADMGAYVSLLEYNNIEGMILFSELSRRRIRSISSLIKVGRTEPVM 76

Query: 68  VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWV 127
           V+RVD  +G+IDLS RRV+ + ++A  + + +++   ++++  AE +G D E  +  +  
Sbjct: 77  VLRVDRERGYIDLSKRRVSDEDKEACEERYNKSKLVHSIMRHVAETVGVDLEELYVNIGW 136

Query: 128 PLEEEWGEVYAAF------------------EDAAKDGIDVLK--GHVPDEWLPVLKEII 167
           PL ++ G  + AF                  ++   DG++V K    V +E      + I
Sbjct: 137 PLYKKHGHAFEAFKIVVTDPDSVFDALTREVKETGPDGVEVTKVVPAVSEELKDAFLKDI 196

Query: 168 DNYVEVPTVTIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRID 227
              +    + I A+ E+   + +GV  IKEA+ +A   A    D  VK   +  P Y   
Sbjct: 197 RRRMTPQPMKIRADIELKCFQFDGVLHIKEAMKKA--EAVGTDDCPVKIKLVAPPLY--V 252

Query: 228 ITAPDYYKAEEV--LESIAEEILRVIKEAGGE 257
           +T   +YK + +  L    E  +  I+E  G+
Sbjct: 253 LTTHTHYKEKGIVTLNKAIEACITAIEEHKGK 284


>sp|P41374|IF2A_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|304674|gb|AAA53627.1| (L19196) eIF-2
           alpha-subunit [Drosophila melanogaster]
           >gi|5052556|gb|AAD38608.1|AF145633_1 (AF145633)
           eukaryotic translation initiation factor 2 Alpha subunit
           [Drosophila melanogaster] >gi|7293233|gb|AAF48615.1|
           (AE003502) eIF-2alpha gene product [Drosophila
           melanogaster]
           Length = 341
           
 Score = 85.4 bits (208), Expect = 6e-16
 Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 9/270 (3%)

Query: 8   YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
           YPE  + V+  V  I   GA++ L EY   E  + +SE++   +R+I   ++ G+     
Sbjct: 12  YPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVV 71

Query: 68  VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLG----KDFETAWR 123
           VIRVD  KG+IDLS RRV+ +  +   + F +A+   +LL+  A+ LG    +  E  ++
Sbjct: 72  VIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKLEDLYQ 131

Query: 124 EVWVPLEEEWGE---VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
           +     E+++      Y  F+ +  D     + ++  E   VL   I   +  PTV I A
Sbjct: 132 KTAWHFEKKYNNKTVAYDIFKQSVTDPTVFDECNLEPETKEVLLSNIKRKLVSPTVKIRA 191

Query: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
           + E +     G++ +K +L +  + + +E  + ++   +  P Y +  +        + L
Sbjct: 192 DIECSCYGYEGIDAVKASLTKGLELSTEE--LPIRINLIAPPLYVMTTSTTKKTDGLKAL 249

Query: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKV 270
           E   E I     E  GE  ++   K +  +
Sbjct: 250 EVAIEHIRAKTSEYDGEFKVIMAPKLVTAI 279


>gb|AAD25944.1|AF085279_17 (AF085279) hypothetical EIF-2-Alpha [Arabidopsis thaliana]
           Length = 370
           
 Score = 84.3 bits (205), Expect = 1e-15
 Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 5/195 (2%)

Query: 7   EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
           +YPE    V+  VK I + GA++ L EY   E  +  SE++   +R++   +K G+    
Sbjct: 16  KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPV 75

Query: 67  KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVW 126
            V+RVD  KG+IDLS RRV+++  +   + + +++   ++++  AE L  D E  +  + 
Sbjct: 76  MVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLSIDLEDLYVNIG 135

Query: 127 VPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITV 186
            PL    G  + AF+    D   VL G +  E    +KE+  +  EV T+       +T 
Sbjct: 136 WPLYRRHGHAFEAFKILVTDPDSVL-GPLTRE----IKEVGPDGQEVYTLFSGIVLAVTK 190

Query: 187 PKPNGVEIIKEALIR 201
             P   E +K+AL++
Sbjct: 191 VVPAVTEEVKDALVK 205


>gb|AAF68997.1|AF257517_1 (AF257517) eIF2 alpha subunit [Danio rerio]
           Length = 315
           
 Score = 83.1 bits (202), Expect = 3e-15
 Identities = 71/258 (27%), Positives = 124/258 (47%), Gaps = 12/258 (4%)

Query: 8   YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
           +PE  + V+  V+ I   GA++ L EY   E  + +SE++   +R+I   ++ G+     
Sbjct: 13  FPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVV 72

Query: 68  VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKL----GKDFETAW- 122
           VIRVD  KG+IDLS RRV+ ++      +F +++   ++L+  AE L     +  E+ + 
Sbjct: 73  VIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQ 132

Query: 123 REVWVPLEEEWGE----VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTI 178
           R  WV  +E++ +     Y  F+ A  D   +    + +E   VL + I+  +    V I
Sbjct: 133 RTAWV-FDEKYKKPGYGAYDVFKQAVSDPAILDGLDLTEEERNVLIDNINRRLTPQAVKI 191

Query: 179 DAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEE 238
            A+ E+      G++ +KEAL RA    + E  + +K   +  PRY +  T  +  +   
Sbjct: 192 RADIEVACYGYEGIDAVKEAL-RAGLNCSTEA-MPIKINLIAPPRYVMTTTTLERTEGLS 249

Query: 239 VLESIAEEILRVIKEAGG 256
           VL      I   I+E  G
Sbjct: 250 VLNQAMAAIKERIEEKRG 267


>gi|4758256 eukaryotic translation initiation factor 2, subunit 1 (alpha, 35kD
           ) [Homo sapiens] >gi|11435186|ref|XP_007451.1|
           eukaryotic translation initiation factor 2, subunit 1
           (alpha, 35kD ) [Homo sapiens]
           >gi|124200|sp|P05198|IF2A_HUMAN EUKARYOTIC TRANSLATION
           INITIATION FACTOR 2 ALPHA SUBUNIT (EIF-2-ALPHA)
           >gi|181995|gb|AAA52373.1| (J02645) translational
           initiation factor eIF-2, alpha subunit [Homo sapiens]
           Length = 315
           
 Score = 82.3 bits (200), Expect = 6e-15
 Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 12/259 (4%)

Query: 7   EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
           ++PE  + V+  V+ I   GA++ L EY   E  + +SE++   +R+I   ++ G+    
Sbjct: 12  KFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECV 71

Query: 67  KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKL----GKDFETAW 122
            VIRVD  KG+IDLS RRV+ ++      +F +++   ++L+  AE L     +  E+ +
Sbjct: 72  VVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLF 131

Query: 123 -REVWVPLEEEWGE----VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVT 177
            R  WV  ++++       Y AF+ A  D   +    + ++   VL   I+  +    V 
Sbjct: 132 QRTAWV-FDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVK 190

Query: 178 IDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAE 237
           I A+ E+      G++ +KEAL RA    + E ++ +K   +  PRY +  T  +  +  
Sbjct: 191 IRADIEVACYGYEGIDAVKEAL-RAGLNCSTE-NMPIKINLIAPPRYVMTTTTLERTEGL 248

Query: 238 EVLESIAEEILRVIKEAGG 256
            VL      I   I+E  G
Sbjct: 249 SVLSQAMAVIKEKIEEKRG 267


>gi|9506571 eukaryotic translation initiation factor 2, subunit 1 (alpha )
           [Rattus norvegicus] >gi|124202|sp|P05199|IF2A_RAT
           EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
           (EIF-2-ALPHA) >gi|92416|pir||A26711 translation
           initiation factor eIF-2 alpha chain - rat
           >gi|108753|pir||S18461 translation initiation factor
           eIF-2 alpha chain - bovine >gi|325|emb|CAA37728.1|
           (X53689) initiation factor 2 alpha [Bos taurus]
           >gi|204002|gb|AAA41110.1| (J02646) translational
           initiation factor eIF-2, alpha subunit [Rattus
           norvegicus]
           Length = 315
           
 Score = 81.5 bits (198), Expect = 1e-14
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 12/259 (4%)

Query: 7   EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
           ++PE  + V+  V+ I   GA++ L EY   E  + +SE++   +R+I   ++ G+    
Sbjct: 12  KFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECV 71

Query: 67  KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKL----GKDFETAW 122
            VIRVD  KG+IDLS RRV+ ++      +F +++   ++L+  AE L     +  E+ +
Sbjct: 72  VVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLF 131

Query: 123 -REVWVPLEEEWGE----VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVT 177
            R  WV  ++++       Y AF+ A  D   +    + ++   VL   I+  +    V 
Sbjct: 132 QRTAWV-FDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVK 190

Query: 178 IDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAE 237
           I A+ E+      G++ +KEAL RA    + E  + +K   +  PRY +  T  +  +  
Sbjct: 191 IRADIEVACYGYEGIDAVKEAL-RAGLNCSTE-TMPIKINLIAPPRYVMTTTTLERTEGL 248

Query: 238 EVLESIAEEILRVIKEAGG 256
            VL      I   I+E  G
Sbjct: 249 SVLNQAMAVIKEKIEEKRG 267


>gb|AAF43476.1|AC012381_12 (AC012381) Elongation Initiation Factor 2, alpha subunit
           [Leishmania major]
           Length = 319
           
 Score = 77.6 bits (188), Expect = 1e-13
 Identities = 66/267 (24%), Positives = 124/267 (45%), Gaps = 14/267 (5%)

Query: 1   MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
           +P      P+  + V   + ++++  A ++L EY  +E  +  +EV    VR++   +K 
Sbjct: 26  IPFYVETMPKINDVVWVKITQVNDTSAVVQLLEYGKREGIIPYTEVTRRRVRSMGKLIKV 85

Query: 61  GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
           G+   A+VIR+D  KG+IDLS + VT  + KA    F++  +  +++   AE        
Sbjct: 86  GRTEPAQVIRIDKDKGYIDLSKKLVTPNEAKACEAHFRQGNEVRSIVCHVAELCDIPAMD 145

Query: 121 AWREVWVPLEEEWGEVYA---AFEDAAKDGIDVLKGHVPDEWL--PVLKEIIDNYVEVPT 175
           A   +  PL +     +A    +E    + ++ + G +  E      L   + N + +  
Sbjct: 146 AMEMIAYPLYQREPGKHAWTWLYELNQTEDVERILGPLKLEKAISDCLMLTLKNAMRLKV 205

Query: 176 VTIDAEFEITVPKPNGVEIIKEALIRARDRA-NKEKDVEVKFTYLGAPRY----RIDITA 230
           +T+ AE EIT    +GVE I++ LI  R      +  + +    +G P+Y    R D+  
Sbjct: 206 LTLFAEVEITCFACDGVEAIRDVLILGRSYGEGSDPQIHLSVNIIGPPKYGIRARTDMKE 265

Query: 231 PDYYKAEEVLESIAEEILRVIKEAGGE 257
               + +E +E++  E    IK+ GG+
Sbjct: 266 EGIQRMKEAIEAMTAE----IKKRGGQ 288


>prf||1710307A initiation factor 2 [Artemia sp.]
           Length = 335
           
 Score = 75.7 bits (183), Expect = 6e-13
 Identities = 68/274 (24%), Positives = 127/274 (45%), Gaps = 13/274 (4%)

Query: 5   AREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKV 64
           A ++PE  + V+  V+ I + GA++ L EY   E  + +SE++   +R+I   ++ G+  
Sbjct: 9   AEKFPETEDVVMVKVRSIADMGAYVNLLEYDDIEGMILLSELSRRRIRSINKLIRIGKTE 68

Query: 65  VAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAA--------EKLGK 116
              VIRVD  KG+IDLS RRV+ +      ++F +A+   ++L+  A        E+L +
Sbjct: 69  PVVVIRVDKDKGYIDLSKRRVSAEDIDKCTEKFSKAKAVNSILRHVAFMLDYQTNEQLEE 128

Query: 117 DFE-TAWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPT 175
            ++ TAW  ++    +     Y AF+ A KD   + +  + ++    L   I   +    
Sbjct: 129 LYQKTAW--LFDKKAKRQSAAYEAFKQAVKDPSLLDECGLDEKTKETLLNQIKQKLTPQA 186

Query: 176 VTIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYK 235
           V I A  E +     G+  +K AL RA    + E ++ +K   + +P + I+    +   
Sbjct: 187 VKIRAYVECSCYGYEGINAVKRAL-RAGMSVSTE-EIPIKINLVASPIFVINTHTQEKED 244

Query: 236 AEEVLESIAEEILRVIKEAGGEATLLRKEKRIKK 269
             + L    + I    ++ GG   +    K + K
Sbjct: 245 GMKALTLALKAIEEAAEKEGGTFRIKSAPKVVTK 278


>dbj|BAB06126.1| (AP001515) polynucleotide phosphorylase [Bacillus halodurans]
           Length = 704
           
 Score = 68.3 bits (164), Expect = 9e-11
 Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 10/105 (9%)

Query: 1   MPRRAREYPEE-------GEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRN 53
           M  +ARE  E+       G+  + TVKRI  +GAF+EL  + GK+  +HIS++A   V  
Sbjct: 603 MNNKAREIIEDIVREVEVGQMYLGTVKRIEKFGAFVEL--FKGKDGLVHISQLAEERVNK 660

Query: 54  IRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFK 98
           + D +K G +++ KV+ +D  +G ++LS + V ++Q+KA+ Q  K
Sbjct: 661 VEDVVKIGDEILVKVMEID-NQGRVNLSRKAVLKEQKKAEEQNQK 704


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.316    0.136    0.387 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102589517
Number of Sequences: 2977
Number of extensions: 4289654
Number of successful extensions: 14548
Number of sequences better than 1.0e-10: 22
Number of HSP's better than  0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 14502
Number of HSP's gapped (non-prelim): 22
length of query: 275
length of database: 189,106,746
effective HSP length: 57
effective length of query: 218
effective length of database: 154,992,987
effective search space: 33788471166
effective search space used: 33788471166
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)