BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0568 (aif2A) DE:translation initiation factor aIF-2, subunit
alpha (aif2A)
(275 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9V0E4|IF2A_PYRAB PROBABLE TRANSLATION INITIATION FACTOR 2 AL... 552 e-156
sp|O58655|IF2A_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 AL... 538 e-152
sp|Q57581|IF2A_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 AL... 274 7e-73
sp|O27363|IF2A_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 AL... 249 4e-65
gi|11498138 translation initiation factor eIF-2, subunit alpha (... 215 3e-55
gb|AAK41314.1| Translation initiation factor aif-2 (eiF2A) [Sulf... 189 4e-47
sp|Q9YF02|IF2A_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 AL... 177 1e-43
emb|CAC12328.1| (AL445066) translation initiation factor eIF-2, ... 175 5e-43
pir||F72737 probable translation initiation factor aIF-2 alpha c... 164 1e-39
gb|AAG19070.1| (AE005006) translation initiation factor eIF-2 su... 163 2e-39
gi|6322466 Translation initiation factor eIF-2 alpha subunit; Su... 125 4e-28
sp|P56286|IF2A_SCHPO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 107 2e-22
gb|AAG37960.1| (AC087079) Hypothetical protein Y37E3.p [Caenorha... 90 2e-17
dbj|BAB11536.1| (AB005241) eukaryotic translation initiation fac... 89 6e-17
sp|P41374|IF2A_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 85 6e-16
gb|AAD25944.1|AF085279_17 (AF085279) hypothetical EIF-2-Alpha [A... 84 1e-15
gb|AAF68997.1|AF257517_1 (AF257517) eIF2 alpha subunit [Danio re... 83 3e-15
gi|4758256 eukaryotic translation initiation factor 2, subunit 1... 82 6e-15
gi|9506571 eukaryotic translation initiation factor 2, subunit 1... 82 1e-14
gb|AAF43476.1|AC012381_12 (AC012381) Elongation Initiation Facto... 78 1e-13
prf||1710307A initiation factor 2 [Artemia sp.] 76 6e-13
dbj|BAB06126.1| (AP001515) polynucleotide phosphorylase [Bacillu... 68 9e-11
>sp|Q9V0E4|IF2A_PYRAB PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|7443485|pir||G75130 translation
initiation factor aif-2, subun it alpha (aif2a) PAB0568
- Pyrococcus abyssi (strain Orsay)
>gi|5458271|emb|CAB49760.1| (AJ248285) translation
initiation factor aIF-2, subun it alpha (aif2A)
[Pyrococcus abyssi]
Length = 275
Score = 552 bits (1408), Expect = e-156
Identities = 275/275 (100%), Positives = 275/275 (100%)
Query: 1 MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE
Sbjct: 1 MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
Query: 61 GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET
Sbjct: 61 GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
Query: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA
Sbjct: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
Query: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL
Sbjct: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
Query: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK 275
ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK
Sbjct: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK 275
>sp|O58655|IF2A_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|7443481|pir||D71087 probable
translation initiation factor eIF-2 alpha chain -
Pyrococcus horikoshii >gi|3257375|dbj|BAA30058.1|
(AP000004) 275aa long hypothetical translation
initiation factor eIF-2 alpha chain [Pyrococcus
horikoshii]
Length = 275
Score = 538 bits (1371), Expect = e-152
Identities = 264/275 (96%), Positives = 272/275 (98%)
Query: 1 MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
MPR+AREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE
Sbjct: 1 MPRKAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
Query: 61 GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLL+LAAEKLGKDFE
Sbjct: 61 GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLRLAAEKLGKDFEA 120
Query: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
AWREVWVPLEEEWGEVYAAFEDAAKDGI+VLKGHVPDEWLPVLKEI++NYVEVPTVTIDA
Sbjct: 121 AWREVWVPLEEEWGEVYAAFEDAAKDGIEVLKGHVPDEWLPVLKEIVENYVEVPTVTIDA 180
Query: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
EFEITVPKPNGVEIIKEALIRARDRANKEKD+EVKFTY GAPRYRIDITAPDYYKAEEVL
Sbjct: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDIEVKFTYQGAPRYRIDITAPDYYKAEEVL 240
Query: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKVKKRKK 275
E IAEEILRVIK+AGGEATLLRKEKRI+KVKKRKK
Sbjct: 241 EDIAEEILRVIKQAGGEATLLRKEKRIRKVKKRKK 275
>sp|Q57581|IF2A_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|2129323|pir||E64314 translation
initiation factor aIF-2 alpha chain - Methanococcus
jannaschii >gi|1592263|gb|AAB98098.1| (U67469)
translation initiation factor aIF-2, subunit alpha
(aif2A) [Methanococcus jannaschii]
Length = 266
Score = 274 bits (694), Expect = 7e-73
Identities = 137/262 (52%), Positives = 187/262 (71%), Gaps = 2/262 (0%)
Query: 6 REYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVV 65
RE+PEEG+ V+ TVK + YGAF+EL EYPGKE +HISEV S WV+NIRD++K GQ+VV
Sbjct: 6 REFPEEGDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVV 65
Query: 66 AKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREV 125
AKV+RVD RKGHIDLSL+RVT+QQ++AK+QE+KR Q+A +L+ AAEKLGK E AW EV
Sbjct: 66 AKVLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEV 125
Query: 126 WVPLEEEWGEVYAAFEDAAKDGIDVLKG-HVPDEWLPVLKEIIDNYVEVPTVTIDAEFEI 184
LE+E+GE+Y AFE +G +VL + +EW VL E+ +E+ V ++ E+
Sbjct: 126 GYLLEDEFGELYNAFETMVIEGKEVLDDLEISEEWKNVLYEVAKESIELTNVEVEGVIEM 185
Query: 185 TVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIA 244
P+G++ IK+AL A +AN +DVEVK TY+GAP+YR+ + APDY EEV + +
Sbjct: 186 KSYAPDGIKQIKKALTTAL-KANPYEDVEVKITYIGAPKYRVVVIAPDYKSGEEVFKKVC 244
Query: 245 EEILRVIKEAGGEATLLRKEKR 266
E+ + IK+ GGE T R+ K+
Sbjct: 245 EKAVATIKKLGGEGTYYRESKK 266
>sp|O27363|IF2A_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|7443482|pir||G69040 translation
initiation factor eIF-2, alpha subunit -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622413|gb|AAB85786.1| (AE000895) translation
initiation factor eIF-2, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 262
Score = 249 bits (628), Expect = 4e-65
Identities = 123/264 (46%), Positives = 181/264 (67%), Gaps = 8/264 (3%)
Query: 1 MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
M RR E+PEEGE VV TV ++ NYGAF L+EYPGKEAF+HISEV+S WV+NIRD+++E
Sbjct: 4 MVRRKNEWPEEGELVVGTVHKVLNYGAFATLEEYPGKEAFIHISEVSSGWVKNIRDFVRE 63
Query: 61 GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
QK+VA+V+RV+PRKGH+D+S++R+ + QR K+Q +K QKAE L+LAA LGKD +T
Sbjct: 64 NQKIVARVLRVNPRKGHVDVSMKRIREDQRTKKIQAWKIEQKAEKFLELAARDLGKDLDT 123
Query: 121 AWREVWVPLEEEWGEVYAAFEDAAKDG-IDVLKGHVPDEWLPVLKEIIDNYVEVPTVTID 179
A+ EV L + +G++Y AFE AA++G +++ VP++W V+ E+ + P V I
Sbjct: 124 AYEEVGYELMDIFGDLYGAFETAAEEGEKSLIEEGVPEDWAAVITEVAKRNITPPEVQIT 183
Query: 180 AEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEV 239
+I PNGVEII++AL A+D + +GAPRYR+ + + DY KAE+
Sbjct: 184 GYVDIKSYAPNGVEIIRKALKSAQDEG-------ITVQAVGAPRYRLIVKSTDYLKAEKQ 236
Query: 240 LESIAEEILRVIKEAGGEATLLRK 263
L+ A++ + ++++ GGE LR+
Sbjct: 237 LKEAAQKCIEIVEKEGGEGEFLRE 260
>gi|11498138 translation initiation factor eIF-2, subunit alpha (eif2A)
[Archaeoglobus fulgidus]
>gi|3122240|sp|O29723|IF2A_ARCFU PROBABLE TRANSLATION
INITIATION FACTOR 2 ALPHA SUBUNIT (EIF-2-ALPHA)
>gi|7443483|pir||G69315 translation initiation factor
eIF-2, subunit alpha (eif2A) homolog - Archaeoglobus
fulgidus >gi|2650097|gb|AAB90710.1| (AE001068)
translation initiation factor eIF-2, subunit alpha
(eif2A) [Archaeoglobus fulgidus]
Length = 267
Score = 215 bits (543), Expect = 3e-55
Identities = 109/256 (42%), Positives = 169/256 (65%), Gaps = 3/256 (1%)
Query: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
YP +GE V+ TVKR+ ++GAF+ LDEY G+E +HISEVAS W+++IR+++K+GQKV+ K
Sbjct: 13 YPSKGEIVIGTVKRVLDFGAFVSLDEYEGREGMVHISEVASGWIKDIREHVKKGQKVICK 72
Query: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWV 127
V+ V+P++GHIDLS++ V ++QR+ KLQ++K KA L++ EKL DF+ ++
Sbjct: 73 VLDVNPKRGHIDLSIKDVNERQRREKLQQWKNEMKAFKWLEIIGEKLNIDFKEL-EKIGK 131
Query: 128 PLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVP 187
L +E+ VY+AFE+AA +G +VL V +E+ + EI ++ V + FE+
Sbjct: 132 KLMKEYDSVYSAFEEAAFEGYEVLAPIVGEEFAKEMAEIARENIKPKRVKVRGYFELKSS 191
Query: 188 KPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEI 247
+G+E IK+AL+ A+ VE+K Y+GAP+YRI + A DY AE VL+ E +
Sbjct: 192 ASDGIERIKKALLEAKKAL--VNGVEMKLEYVGAPKYRIVVEADDYKTAENVLKKATENV 249
Query: 248 LRVIKEAGGEATLLRK 263
L+ IK+ GGE +R+
Sbjct: 250 LKAIKKLGGEGNFIRE 265
>gb|AAK41314.1| Translation initiation factor aif-2 (eiF2A) [Sulfolobus
solfataricus]
Length = 266
Score = 189 bits (474), Expect = 4e-47
Identities = 100/260 (38%), Positives = 161/260 (61%), Gaps = 7/260 (2%)
Query: 9 PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKV 68
P EGE ++ATVK++ +YG+++ LDEY G +AF+ SEV+S WV+NIRD LKE +KV+ KV
Sbjct: 9 PSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENRKVIVKV 68
Query: 69 IRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVP 128
IRVD RKG +D+SL++VT +R+ K ++K+ Q+ + +L+L ++KL + AW +V
Sbjct: 69 IRVDRRKGTVDVSLKKVTDDERRKKNLQWKKIQRLDKILELVSQKLKLSEKDAWEQVAWK 128
Query: 129 LEEEWGEVYAAFEDAAKDGIDVL-KGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVP 187
LE ++G+ A E A K+G +L VP+ W+ L E + E V + +
Sbjct: 129 LEAKYGDPITAIEKAVKEGEKILIDAGVPEIWVKPLLEEASKHAEERKVKMSGLITVRTN 188
Query: 188 KPNGVEIIKEALIRARDRANKEKDVE----VKFTYLGAPRYRIDITAPDYYKAEEVLESI 243
+P GVE IKE + +A + N E+D E +K +GAPRYR+D+ + +A E L I
Sbjct: 189 EPLGVEKIKEVISKALE--NIEQDYESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQI 246
Query: 244 AEEILRVIKEAGGEATLLRK 263
++++ KE + ++++K
Sbjct: 247 ISNLIKIGKEENVDISVVKK 266
>sp|Q9YF02|IF2A_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA)
Length = 266
Score = 177 bits (445), Expect = 1e-43
Identities = 102/259 (39%), Positives = 151/259 (57%), Gaps = 3/259 (1%)
Query: 9 PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKV 68
P+ GE VV TV+ +H+YGA+L LDEY G AF+ SE+AS VRNI LK QKVV KV
Sbjct: 8 PDVGEIVVGTVQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKV 67
Query: 69 IRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVP 128
IRV ++G +D+SL+RV ++K K+ +KR KA L++L AEKLGK + A+REV
Sbjct: 68 IRVYKKRGQVDVSLKRVMDSEKKRKMMFYKRYLKAATLVELIAEKLGKSVDEAYREVLWK 127
Query: 129 LEEEWGEVYAAFEDAAKDGIDVL-KGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVP 187
LE+ +G+ E A G + L K VP+EW+ L E +V V TV I +
Sbjct: 128 LEDAYGDPMKGLEAAVLQGREALEKAGVPEEWIEPLLETAKTHVRVKTVKITFYLTLRSM 187
Query: 188 KPNGVEIIKEALIRARDRANKEKDVEV--KFTYLGAPRYRIDITAPDYYKAEEVLESIAE 245
+GVE +++ L A+ + KD +V + +GAP+YR+++ +Y E+ LE + E
Sbjct: 188 AGDGVERVRKVLEAAKSQIESFKDSKVVARIYTVGAPKYRVELQGYNYKTLEKALEKMVE 247
Query: 246 EILRVIKEAGGEATLLRKE 264
+ + G E + R++
Sbjct: 248 AARKTASKLGVEFSFERED 266
>emb|CAC12328.1| (AL445066) translation initiation factor eIF-2, alpha subunit
related protein [Thermoplasma acidophilum]
Length = 254
Score = 175 bits (439), Expect = 5e-43
Identities = 94/237 (39%), Positives = 142/237 (59%), Gaps = 7/237 (2%)
Query: 9 PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKV 68
P+ G+ VV + + N+GA L+EYPG E ++HISEVA+ WV++IR YL+EGQ+VV KV
Sbjct: 7 PDNGDLVVVKITEVKNFGANGVLEEYPGVEGYIHISEVATGWVKHIRSYLREGQRVVCKV 66
Query: 69 IRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVP 128
I V+P + +DLSL+RV Q Q + K+ E+K QKA+ L ++ +L ++ E +
Sbjct: 67 IGVNPERKVVDLSLKRVNQHQSREKIAEWKNEQKADKLFEIVCSRLNRNPEECKEQFGRR 126
Query: 129 LEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVPK 188
L E +G ++AAFE AA+ + L + +W V EI + +P V++ FE+
Sbjct: 127 LVELFGTLFAAFESAAQSNGEWLP-EMNGDWKNVFVEIAKENITIPEVSVSGYFEVYSLA 185
Query: 189 PNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAE 245
+GVE IKE L D +V+ Y+GAPRYRI + DY KAEE+L+ + +
Sbjct: 186 SDGVERIKEVLTIPEDTG------KVELEYVGAPRYRIVVKDKDYKKAEEILKKVVQ 236
>pir||F72737 probable translation initiation factor aIF-2 alpha chain APE0436
[imported] - Aeropyrum pernix (strain K1)
>gi|5104078|dbj|BAA79394.1| (AP000059) 249aa long
hypothetical eukaryotic translation initiation factor
eIF-2 alpha chain [Aeropyrum pernix]
Length = 249
Score = 164 bits (411), Expect = 1e-39
Identities = 95/249 (38%), Positives = 144/249 (57%), Gaps = 3/249 (1%)
Query: 19 VKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHI 78
++ +H+YGA+L LDEY G AF+ SE+AS VRNI LK QKVV KVIRV ++G +
Sbjct: 1 MQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKVIRVYKKRGQV 60
Query: 79 DLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVPLEEEWGEVYA 138
D+SL+RV ++K K+ +KR KA L++L AEKLGK + A+REV LE+ +G+
Sbjct: 61 DVSLKRVMDSEKKRKMMFYKRYLKAATLVELIAEKLGKSVDEAYREVLWKLEDAYGDPMK 120
Query: 139 AFEDAAKDGIDVL-KGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVPKPNGVEIIKE 197
E A G + L K VP+EW+ L E +V V TV I + +GVE +++
Sbjct: 121 GLEAAVLQGREALEKAGVPEEWIEPLLETAKTHVRVKTVKITFYLTLRSMAGDGVERVRK 180
Query: 198 ALIRARDRANKEKDVEV--KFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAG 255
L A+ + KD +V + +GAP+YR+++ +Y E+ LE + E + + G
Sbjct: 181 VLEAAKSQIESFKDSKVVARIYTVGAPKYRVELQGYNYKTLEKALEKMVEAARKTASKLG 240
Query: 256 GEATLLRKE 264
E + R++
Sbjct: 241 VEFSFERED 249
>gb|AAG19070.1| (AE005006) translation initiation factor eIF-2 subunit alpha; Eif2a
[Halobacterium sp. NRC-1]
Length = 267
Score = 163 bits (408), Expect = 2e-39
Identities = 92/260 (35%), Positives = 143/260 (54%), Gaps = 5/260 (1%)
Query: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
+P+EGE VV V I ++G F++L++Y K +H+SEVAS W++N+RD++ E Q VVAK
Sbjct: 6 WPDEGELVVGKVDDIEDFGVFVDLEQYQDKRGLVHVSEVASGWIKNVRDHVNEDQTVVAK 65
Query: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDF-ETAWREVW 126
V+ VD IDLSL+ V Q +QE+K QKA+ L LA G+D + +R +
Sbjct: 66 VLGVDESAQQIDLSLKDVNDHQHSDTIQEWKNEQKADKWLTLA---FGEDMADDQFRRIA 122
Query: 127 VPLEEEWGEVYAAFEDAAKDGIDVLKG-HVPDEWLPVLKEIIDNYVEVPTVTIDAEFEIT 185
L ++G +Y FE AA G + L + D+ + + E + V VP VT+ +
Sbjct: 123 NGLLADFGSLYDGFEQAAIHGHEALADTALEDDEIDAIVETARDNVSVPYVTVTGYVSLQ 182
Query: 186 VPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAE 245
P +GV+ IK+AL A +V++ TY+GAP YR+ + AP+Y AE LE+ +
Sbjct: 183 SPDGDGVDTIKDALQAAEGNGEVPDEVDLDVTYVGAPEYRLRVQAPNYKTAESALEAAGD 242
Query: 246 EILRVIKEAGGEATLLRKEK 265
+ + G R+ +
Sbjct: 243 RAVDSVTAHDGSGAFHRERQ 262
>gi|6322466 Translation initiation factor eIF-2 alpha subunit; Sui2p
[Saccharomyces cerevisiae]
>gi|124203|sp|P20459|IF2A_YEAST EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 ALPHA SUBUNIT (EIF-2-ALPHA)
>gi|101413|pir||A32108 translation initiation factor
eIF-2 alpha chain - yeast (Saccharomyces cerevisiae)
>gi|854580|emb|CAA60929.1| (X87611) translation
initiation factor [Saccharomyces cerevisiae]
>gi|903889|gb|AAA70332.1| (M25552) translation
initiation factor 2 alpha subunit [Saccharomyces
cerevisiae] >gi|1015632|emb|CAA89529.1| (Z49507) ORF
YJR007w [Saccharomyces cerevisiae]
Length = 304
Score = 125 bits (312), Expect = 4e-28
Identities = 82/266 (30%), Positives = 140/266 (51%), Gaps = 11/266 (4%)
Query: 7 EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
+YPE + V+ V++I GA+++L EY E + +SE++ +R+I+ ++ G+ VA
Sbjct: 12 KYPEIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKNDVA 71
Query: 67 KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVW 126
V+RVD KG+IDLS RRV+ + +++++++ ++L+ AEK E ++ +
Sbjct: 72 VVLRVDKEKGYIDLSKRRVSSEDIIKCEEKYQKSKTVHSILRYCAEKFQIPLEELYKTIA 131
Query: 127 VPLEEEWGEVYAAF-----EDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAE 181
PL ++G Y AF ++ +GI+ V DE LK I + V I A+
Sbjct: 132 WPLSRKFGHAYEAFKLSIIDETVWEGIEPPSKDVLDE----LKNYISKRLTPQAVKIRAD 187
Query: 182 FEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLE 241
E++ G++ IK+AL A D + ++ V+VK + AP Y + A D K E LE
Sbjct: 188 VEVSCFSYEGIDAIKDALKSAEDMSTEQMQVKVKL--VAAPLYVLTTQALDKQKGIEQLE 245
Query: 242 SIAEEILRVIKEAGGEATLLRKEKRI 267
S E+I VI + GG + K +
Sbjct: 246 SAIEKITEVITKYGGVCNITMPPKAV 271
>sp|P56286|IF2A_SCHPO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|7443486|pir||T11645 translation
initiation factor eIF-2 alpha chain - fission yeast
(Schizosaccharomyces pombe) >gi|2706460|emb|CAA15918.1|
(AL021046) eukaryotic translation initiation factor 2
alpha subunit [Schizosaccharomyces pombe]
Length = 306
Score = 107 bits (264), Expect = 2e-22
Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 6/265 (2%)
Query: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
+PE E VV V++I GA+++L EY E + +SE++ +R+++ +++ G+ V
Sbjct: 13 FPEVDELVVVNVRQIQEMGAYVKLLEYDNIEGMVLLSELSRRRIRSVQKHIRVGRNEVVV 72
Query: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWV 127
V+RVD KG+IDLS RRV+ + + F +++ ++++ AEK ET + +
Sbjct: 73 VLRVDKEKGYIDLSKRRVSPEDVVKCEERFNKSKAVHSIMRHIAEKHNVPLETMYTTIGW 132
Query: 128 PLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEI---IDNYVEVPTVTIDAEFEI 184
PL ++G Y AF+ A + V +G P + V+ ++ I + + I A+ E+
Sbjct: 133 PLYRKYGHAYDAFKLAISNPDHVFEGLEPPK-SGVINDLLAQISRRLTPQPIKIRADVEV 191
Query: 185 TVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIA 244
T G+ IK AL A D +E ++VK + P Y + A D + LE
Sbjct: 192 TCFGYEGINAIKAALKAAEDVHTEEVPIKVKL--VAPPLYVLLTNALDKSLGLKKLEEAI 249
Query: 245 EEILRVIKEAGGEATLLRKEKRIKK 269
I + I + G T+ K K + +
Sbjct: 250 GAIEKSITASNGTCTVKMKPKAVSE 274
>gb|AAG37960.1| (AC087079) Hypothetical protein Y37E3.p [Caenorhabditis elegans]
Length = 421
Score = 90.5 bits (221), Expect = 2e-17
Identities = 65/219 (29%), Positives = 113/219 (50%), Gaps = 11/219 (5%)
Query: 7 EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
++P+ E VVA VK I + GA++ L EY KE + +SE++ +R++ ++ G+
Sbjct: 31 QFPDVEETVVANVKMIADMGAYVRLSEYNDKEGMILLSELSRRRIRSVNKLIRVGRSESV 90
Query: 67 KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLG-------KDF- 118
VIRVD KG+IDLS RRV Q+ K + F A+ ++L+ AE++G +D
Sbjct: 91 VVIRVDKDKGYIDLSKRRVYQKDLKQCDERFANAKMVNSILRHVAEQVGYTTDEELEDLY 150
Query: 119 -ETAWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVT 177
+TAW + E+ Y AF+ A + + + + + L E I + V
Sbjct: 151 QKTAWH--FDRKEKRKAASYDAFKKAITEPTILDECDISADIKEKLLEDIRKKLTPQAVK 208
Query: 178 IDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKF 216
I A+ E++ +G++ +K ALI ++ +N ++V F
Sbjct: 209 IRADIEVSCFDYDGIDAVKAALIAGKNCSNGTFPIKVSF 247
>dbj|BAB11536.1| (AB005241) eukaryotic translation initiation factor 2 alpha
subunit-like protein [Arabidopsis thaliana]
Length = 344
Score = 88.9 bits (217), Expect = 6e-17
Identities = 72/272 (26%), Positives = 128/272 (46%), Gaps = 26/272 (9%)
Query: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
YP+ V+ VK I + GA++ L EY E + SE++ +R+I +K G+
Sbjct: 17 YPDVDMAVMIQVKTIADMGAYVSLLEYNNIEGMILFSELSRRRIRSISSLIKVGRTEPVM 76
Query: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWV 127
V+RVD +G+IDLS RRV+ + ++A + + +++ ++++ AE +G D E + +
Sbjct: 77 VLRVDRERGYIDLSKRRVSDEDKEACEERYNKSKLVHSIMRHVAETVGVDLEELYVNIGW 136
Query: 128 PLEEEWGEVYAAF------------------EDAAKDGIDVLK--GHVPDEWLPVLKEII 167
PL ++ G + AF ++ DG++V K V +E + I
Sbjct: 137 PLYKKHGHAFEAFKIVVTDPDSVFDALTREVKETGPDGVEVTKVVPAVSEELKDAFLKDI 196
Query: 168 DNYVEVPTVTIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRID 227
+ + I A+ E+ + +GV IKEA+ +A A D VK + P Y
Sbjct: 197 RRRMTPQPMKIRADIELKCFQFDGVLHIKEAMKKA--EAVGTDDCPVKIKLVAPPLY--V 252
Query: 228 ITAPDYYKAEEV--LESIAEEILRVIKEAGGE 257
+T +YK + + L E + I+E G+
Sbjct: 253 LTTHTHYKEKGIVTLNKAIEACITAIEEHKGK 284
>sp|P41374|IF2A_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|304674|gb|AAA53627.1| (L19196) eIF-2
alpha-subunit [Drosophila melanogaster]
>gi|5052556|gb|AAD38608.1|AF145633_1 (AF145633)
eukaryotic translation initiation factor 2 Alpha subunit
[Drosophila melanogaster] >gi|7293233|gb|AAF48615.1|
(AE003502) eIF-2alpha gene product [Drosophila
melanogaster]
Length = 341
Score = 85.4 bits (208), Expect = 6e-16
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
YPE + V+ V I GA++ L EY E + +SE++ +R+I ++ G+
Sbjct: 12 YPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVV 71
Query: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLG----KDFETAWR 123
VIRVD KG+IDLS RRV+ + + + F +A+ +LL+ A+ LG + E ++
Sbjct: 72 VIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKLEDLYQ 131
Query: 124 EVWVPLEEEWGE---VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDA 180
+ E+++ Y F+ + D + ++ E VL I + PTV I A
Sbjct: 132 KTAWHFEKKYNNKTVAYDIFKQSVTDPTVFDECNLEPETKEVLLSNIKRKLVSPTVKIRA 191
Query: 181 EFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVL 240
+ E + G++ +K +L + + + +E + ++ + P Y + + + L
Sbjct: 192 DIECSCYGYEGIDAVKASLTKGLELSTEE--LPIRINLIAPPLYVMTTSTTKKTDGLKAL 249
Query: 241 ESIAEEILRVIKEAGGEATLLRKEKRIKKV 270
E E I E GE ++ K + +
Sbjct: 250 EVAIEHIRAKTSEYDGEFKVIMAPKLVTAI 279
>gb|AAD25944.1|AF085279_17 (AF085279) hypothetical EIF-2-Alpha [Arabidopsis thaliana]
Length = 370
Score = 84.3 bits (205), Expect = 1e-15
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Query: 7 EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
+YPE V+ VK I + GA++ L EY E + SE++ +R++ +K G+
Sbjct: 16 KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPV 75
Query: 67 KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVW 126
V+RVD KG+IDLS RRV+++ + + + +++ ++++ AE L D E + +
Sbjct: 76 MVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLSIDLEDLYVNIG 135
Query: 127 VPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITV 186
PL G + AF+ D VL G + E +KE+ + EV T+ +T
Sbjct: 136 WPLYRRHGHAFEAFKILVTDPDSVL-GPLTRE----IKEVGPDGQEVYTLFSGIVLAVTK 190
Query: 187 PKPNGVEIIKEALIR 201
P E +K+AL++
Sbjct: 191 VVPAVTEEVKDALVK 205
>gb|AAF68997.1|AF257517_1 (AF257517) eIF2 alpha subunit [Danio rerio]
Length = 315
Score = 83.1 bits (202), Expect = 3e-15
Identities = 71/258 (27%), Positives = 124/258 (47%), Gaps = 12/258 (4%)
Query: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAK 67
+PE + V+ V+ I GA++ L EY E + +SE++ +R+I ++ G+
Sbjct: 13 FPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVV 72
Query: 68 VIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKL----GKDFETAW- 122
VIRVD KG+IDLS RRV+ ++ +F +++ ++L+ AE L + E+ +
Sbjct: 73 VIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQ 132
Query: 123 REVWVPLEEEWGE----VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTI 178
R WV +E++ + Y F+ A D + + +E VL + I+ + V I
Sbjct: 133 RTAWV-FDEKYKKPGYGAYDVFKQAVSDPAILDGLDLTEEERNVLIDNINRRLTPQAVKI 191
Query: 179 DAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEE 238
A+ E+ G++ +KEAL RA + E + +K + PRY + T + +
Sbjct: 192 RADIEVACYGYEGIDAVKEAL-RAGLNCSTEA-MPIKINLIAPPRYVMTTTTLERTEGLS 249
Query: 239 VLESIAEEILRVIKEAGG 256
VL I I+E G
Sbjct: 250 VLNQAMAAIKERIEEKRG 267
>gi|4758256 eukaryotic translation initiation factor 2, subunit 1 (alpha, 35kD
) [Homo sapiens] >gi|11435186|ref|XP_007451.1|
eukaryotic translation initiation factor 2, subunit 1
(alpha, 35kD ) [Homo sapiens]
>gi|124200|sp|P05198|IF2A_HUMAN EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 ALPHA SUBUNIT (EIF-2-ALPHA)
>gi|181995|gb|AAA52373.1| (J02645) translational
initiation factor eIF-2, alpha subunit [Homo sapiens]
Length = 315
Score = 82.3 bits (200), Expect = 6e-15
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 7 EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
++PE + V+ V+ I GA++ L EY E + +SE++ +R+I ++ G+
Sbjct: 12 KFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECV 71
Query: 67 KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKL----GKDFETAW 122
VIRVD KG+IDLS RRV+ ++ +F +++ ++L+ AE L + E+ +
Sbjct: 72 VVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLF 131
Query: 123 -REVWVPLEEEWGE----VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVT 177
R WV ++++ Y AF+ A D + + ++ VL I+ + V
Sbjct: 132 QRTAWV-FDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVK 190
Query: 178 IDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAE 237
I A+ E+ G++ +KEAL RA + E ++ +K + PRY + T + +
Sbjct: 191 IRADIEVACYGYEGIDAVKEAL-RAGLNCSTE-NMPIKINLIAPPRYVMTTTTLERTEGL 248
Query: 238 EVLESIAEEILRVIKEAGG 256
VL I I+E G
Sbjct: 249 SVLSQAMAVIKEKIEEKRG 267
>gi|9506571 eukaryotic translation initiation factor 2, subunit 1 (alpha )
[Rattus norvegicus] >gi|124202|sp|P05199|IF2A_RAT
EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT
(EIF-2-ALPHA) >gi|92416|pir||A26711 translation
initiation factor eIF-2 alpha chain - rat
>gi|108753|pir||S18461 translation initiation factor
eIF-2 alpha chain - bovine >gi|325|emb|CAA37728.1|
(X53689) initiation factor 2 alpha [Bos taurus]
>gi|204002|gb|AAA41110.1| (J02646) translational
initiation factor eIF-2, alpha subunit [Rattus
norvegicus]
Length = 315
Score = 81.5 bits (198), Expect = 1e-14
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 7 EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVA 66
++PE + V+ V+ I GA++ L EY E + +SE++ +R+I ++ G+
Sbjct: 12 KFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECV 71
Query: 67 KVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKL----GKDFETAW 122
VIRVD KG+IDLS RRV+ ++ +F +++ ++L+ AE L + E+ +
Sbjct: 72 VVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLF 131
Query: 123 -REVWVPLEEEWGE----VYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVT 177
R WV ++++ Y AF+ A D + + ++ VL I+ + V
Sbjct: 132 QRTAWV-FDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVK 190
Query: 178 IDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAE 237
I A+ E+ G++ +KEAL RA + E + +K + PRY + T + +
Sbjct: 191 IRADIEVACYGYEGIDAVKEAL-RAGLNCSTE-TMPIKINLIAPPRYVMTTTTLERTEGL 248
Query: 238 EVLESIAEEILRVIKEAGG 256
VL I I+E G
Sbjct: 249 SVLNQAMAVIKEKIEEKRG 267
>gb|AAF43476.1|AC012381_12 (AC012381) Elongation Initiation Factor 2, alpha subunit
[Leishmania major]
Length = 319
Score = 77.6 bits (188), Expect = 1e-13
Identities = 66/267 (24%), Positives = 124/267 (45%), Gaps = 14/267 (5%)
Query: 1 MPRRAREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKE 60
+P P+ + V + ++++ A ++L EY +E + +EV VR++ +K
Sbjct: 26 IPFYVETMPKINDVVWVKITQVNDTSAVVQLLEYGKREGIIPYTEVTRRRVRSMGKLIKV 85
Query: 61 GQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFET 120
G+ A+VIR+D KG+IDLS + VT + KA F++ + +++ AE
Sbjct: 86 GRTEPAQVIRIDKDKGYIDLSKKLVTPNEAKACEAHFRQGNEVRSIVCHVAELCDIPAMD 145
Query: 121 AWREVWVPLEEEWGEVYA---AFEDAAKDGIDVLKGHVPDEWL--PVLKEIIDNYVEVPT 175
A + PL + +A +E + ++ + G + E L + N + +
Sbjct: 146 AMEMIAYPLYQREPGKHAWTWLYELNQTEDVERILGPLKLEKAISDCLMLTLKNAMRLKV 205
Query: 176 VTIDAEFEITVPKPNGVEIIKEALIRARDRA-NKEKDVEVKFTYLGAPRY----RIDITA 230
+T+ AE EIT +GVE I++ LI R + + + +G P+Y R D+
Sbjct: 206 LTLFAEVEITCFACDGVEAIRDVLILGRSYGEGSDPQIHLSVNIIGPPKYGIRARTDMKE 265
Query: 231 PDYYKAEEVLESIAEEILRVIKEAGGE 257
+ +E +E++ E IK+ GG+
Sbjct: 266 EGIQRMKEAIEAMTAE----IKKRGGQ 288
>prf||1710307A initiation factor 2 [Artemia sp.]
Length = 335
Score = 75.7 bits (183), Expect = 6e-13
Identities = 68/274 (24%), Positives = 127/274 (45%), Gaps = 13/274 (4%)
Query: 5 AREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKV 64
A ++PE + V+ V+ I + GA++ L EY E + +SE++ +R+I ++ G+
Sbjct: 9 AEKFPETEDVVMVKVRSIADMGAYVNLLEYDDIEGMILLSELSRRRIRSINKLIRIGKTE 68
Query: 65 VAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAA--------EKLGK 116
VIRVD KG+IDLS RRV+ + ++F +A+ ++L+ A E+L +
Sbjct: 69 PVVVIRVDKDKGYIDLSKRRVSAEDIDKCTEKFSKAKAVNSILRHVAFMLDYQTNEQLEE 128
Query: 117 DFE-TAWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPT 175
++ TAW ++ + Y AF+ A KD + + + ++ L I +
Sbjct: 129 LYQKTAW--LFDKKAKRQSAAYEAFKQAVKDPSLLDECGLDEKTKETLLNQIKQKLTPQA 186
Query: 176 VTIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYK 235
V I A E + G+ +K AL RA + E ++ +K + +P + I+ +
Sbjct: 187 VKIRAYVECSCYGYEGINAVKRAL-RAGMSVSTE-EIPIKINLVASPIFVINTHTQEKED 244
Query: 236 AEEVLESIAEEILRVIKEAGGEATLLRKEKRIKK 269
+ L + I ++ GG + K + K
Sbjct: 245 GMKALTLALKAIEEAAEKEGGTFRIKSAPKVVTK 278
>dbj|BAB06126.1| (AP001515) polynucleotide phosphorylase [Bacillus halodurans]
Length = 704
Score = 68.3 bits (164), Expect = 9e-11
Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 10/105 (9%)
Query: 1 MPRRAREYPEE-------GEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRN 53
M +ARE E+ G+ + TVKRI +GAF+EL + GK+ +HIS++A V
Sbjct: 603 MNNKAREIIEDIVREVEVGQMYLGTVKRIEKFGAFVEL--FKGKDGLVHISQLAEERVNK 660
Query: 54 IRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFK 98
+ D +K G +++ KV+ +D +G ++LS + V ++Q+KA+ Q K
Sbjct: 661 VEDVVKIGDEILVKVMEID-NQGRVNLSRKAVLKEQKKAEEQNQK 704
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.136 0.387
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102589517
Number of Sequences: 2977
Number of extensions: 4289654
Number of successful extensions: 14548
Number of sequences better than 1.0e-10: 22
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 14502
Number of HSP's gapped (non-prelim): 22
length of query: 275
length of database: 189,106,746
effective HSP length: 57
effective length of query: 218
effective length of database: 154,992,987
effective search space: 33788471166
effective search space used: 33788471166
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)