BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0577 (PAB0577) DE:Hypothetical protein
(314 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75132 hypothetical protein PAB0577 - Pyrococcus abyssi (st... 630 e-180
pir||H71089 hypothetical protein PH0981 - Pyrococcus horikoshii ... 519 e-146
sp|Q58708|YD12_METJA HYPOTHETICAL PROTEIN MJ1312 >gi|2128783|pir... 384 e-106
emb|CAC12584.1| (AL445067) conserved hypothetical protein [Therm... 314 7e-85
gi|11500018 conserved hypothetical protein [Archaeoglobus fulgidus] 282 3e-75
pir||G72271 conserved hypothetical protein - Thermotoga maritima... 189 5e-47
pir||F81331 hypothetical protein Cj1244 [imported] - Campylobact... 131 1e-29
sp|Q9ZMV6|Y117_HELPJ HYPOTHETICAL PROTEIN HP0117/JHP0109 >gi|746... 125 6e-28
sp|P56080|Y117_HELPY HYPOTHETICAL PROTEIN HP0117 >gi|7463962|pir... 121 1e-26
sp|P74557|YE64_SYNY3 HYPOTHETICAL 29.3 KD PROTEIN SLR1464 >gi|74... 112 6e-24
>pir||F75132 hypothetical protein PAB0577 - Pyrococcus abyssi (strain Orsay)
>gi|5458286|emb|CAB49775.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 314
Score = 630 bits (1608), Expect = e-180
Identities = 314/314 (100%), Positives = 314/314 (100%)
Query: 1 MIAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
MIAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER
Sbjct: 1 MIAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
Query: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDD 120
KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDD
Sbjct: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDD 120
Query: 121 LQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLININY 180
LQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLININY
Sbjct: 121 LQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLININY 180
Query: 181 GNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEYL 240
GNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEYL
Sbjct: 181 GNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEYL 240
Query: 241 IGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIELEY 300
IGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIELEY
Sbjct: 241 IGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIELEY 300
Query: 301 NGVKFYMRRLKSRV 314
NGVKFYMRRLKSRV
Sbjct: 301 NGVKFYMRRLKSRV 314
>pir||H71089 hypothetical protein PH0981 - Pyrococcus horikoshii
>gi|3257395|dbj|BAA30078.1| (AP000004) 309aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 309
Score = 519 bits (1322), Expect = e-146
Identities = 249/313 (79%), Positives = 285/313 (90%), Gaps = 4/313 (1%)
Query: 1 MIAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
M+AFGPVPSRRLGRSLGVNNIP K+CSYACVYCQIGKT+KM+VER++FY+P +I+ +V
Sbjct: 1 MLAFGPVPSRRLGRSLGVNNIPAKICSYACVYCQIGKTLKMEVERRKFYEPERIYNDVSA 60
Query: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDD 120
KV+ GERIDY+TFVPDGEPTLDINLGKEA +L+D GIKLAILTNSSL+WREDVR+D
Sbjct: 61 KVKS----GERIDYITFVPDGEPTLDINLGKEAEMLRDFGIKLAILTNSSLIWREDVRED 116
Query: 121 LQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLININY 180
L NFDL+SLKLDAV++ IWR+V+RPHKSL LEKILEGML R EF+G +ITETMLINI+Y
Sbjct: 117 LMNFDLVSLKLDAVSDDIWRKVNRPHKSLSLEKILEGMLDFRKEFKGTIITETMLINIDY 176
Query: 181 GNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEYL 240
G ELE+IA FL+ELKPDKAYIAIPTRPPAE WVKPASE +I+ AYQLF+EA+G E+VEYL
Sbjct: 177 GEELEKIATFLKELKPDKAYIAIPTRPPAESWVKPASEVIINKAYQLFSEALGEERVEYL 236
Query: 241 IGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIELEY 300
IGYEGNAFAFTGNVEEDLLSITAVHPMRE+AV+ELLRKA ASWDVVEK+I+EGKLIELEY
Sbjct: 237 IGYEGNAFAFTGNVEEDLLSITAVHPMREEAVRELLRKAGASWDVVEKMIKEGKLIELEY 296
Query: 301 NGVKFYMRRLKSR 313
NG KFYMR+L SR
Sbjct: 297 NGKKFYMRKLGSR 309
>sp|Q58708|YD12_METJA HYPOTHETICAL PROTEIN MJ1312 >gi|2128783|pir||G64463 hypothetical
protein MJ1312 - Methanococcus jannaschii
>gi|1591951|gb|AAB99319.1| (U67571) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 321
Score = 384 bits (976), Expect = e-106
Identities = 181/314 (57%), Positives = 243/314 (76%), Gaps = 4/314 (1%)
Query: 2 IAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVERK 61
IAFGPVPSRRLG+SLG+N+IP K CSY CVYCQ+G+TI +ER+EFY P IF+ VE +
Sbjct: 3 IAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEER 62
Query: 62 VREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDDL 121
+ + E+IDY+TFV DGEPTLDINL KE +L+D I +AI+TNSSL+WREDVR+D+
Sbjct: 63 IGKLNN--EKIDYLTFVADGEPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDI 120
Query: 122 QNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLI-NINY 180
NFDL+S K+D+V EKIWR ++RPHK L L+KILEGM+ RD ++G+LITETM++ +I Y
Sbjct: 121 LNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFRDNYKGELITETMILGSIKY 180
Query: 181 GNE-LERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEY 239
E + + A+FL+EL P+K Y+ P RPP+EK++KP EVI +F E IG K++
Sbjct: 181 TEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL 240
Query: 240 LIGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIELE 299
L +EGN F F+ NVEED+L+IT+VHPMRE+ +KELL K+N S+D++ K++ EGKLI+LE
Sbjct: 241 LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLE 300
Query: 300 YNGVKFYMRRLKSR 313
Y+G FYM+ +KSR
Sbjct: 301 YDGKVFYMKNIKSR 314
>emb|CAC12584.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 325
Score = 314 bits (797), Expect = 7e-85
Identities = 156/309 (50%), Positives = 224/309 (72%), Gaps = 4/309 (1%)
Query: 2 IAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVERK 61
+ FGPVPSRRLG SLGVNNIP K+CSY+CVYCQIG+TI ++RQEFY + I + + RK
Sbjct: 6 LLFGPVPSRRLGFSLGVNNIPRKICSYSCVYCQIGRTINFSIKRQEFYSTDDILDALTRK 65
Query: 62 VREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDDL 121
+ E G RIDYVTFVPDGEPTLD+NLGK +K G+K+A+++N+SL+ EDV DL
Sbjct: 66 IEEVRTGGGRIDYVTFVPDGEPTLDVNLGKHIEAIKSTGMKVAVISNASLIDNEDVASDL 125
Query: 122 QNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLIN-INY 180
+ D +SLK+DA+ + W+ +DRPH SL IL+G+ +++ G L TETML++ I
Sbjct: 126 MDADWVSLKVDAIDDVKWKIIDRPHGSLNHSIILDGIRKFSEKYHGILATETMLVDGIQD 185
Query: 181 GNELERIADFLREL-KPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEY 239
E+ IA++L L K D AYI++PTRPPAE++VKP S+E+I+ A+Q+F +G+ KV
Sbjct: 186 LGEIHIIAEYLSSLRKLDLAYISVPTRPPAEEYVKPPSDELINAAFQVFNNHLGNTKVSL 245
Query: 240 LIGYEGNAFAFTG-NVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIEL 298
L GYEG+ F FTG ++E+++L+I AVHPMREDA+ E++ ++ S + V+ +++ GK+ ++
Sbjct: 246 LTGYEGSEF-FTGESLEDEILNILAVHPMREDALLEVIERSGESAEFVDHMVKYGKISKV 304
Query: 299 EYNGVKFYM 307
Y G FY+
Sbjct: 305 PYMGKFFYI 313
>gi|11500018 conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 281
Score = 282 bits (715), Expect = 3e-75
Identities = 151/279 (54%), Positives = 201/279 (71%), Gaps = 10/279 (3%)
Query: 1 MIAFGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
M+ FGPVPSRRLG SLGVNNIP K CSY+CVYCQ+G+T K VER EFY+P I + V R
Sbjct: 1 MLVFGPVPSRRLGNSLGVNNIPFKHCSYSCVYCQLGRTPKTTVERGEFYEPKDILDSVRR 60
Query: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLAILTNSSLVWREDVRDD 120
++ R E++DY+TFVPDGEPTLD NLG E +LKDLG ++A++TNSSL++ EDVR +
Sbjct: 61 RIDAV--RKEKVDYITFVPDGEPTLDKNLGAEISMLKDLG-RVAVVTNSSLLFMEDVRLE 117
Query: 121 LQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLIN-IN 179
L +L+SLK+DAV E +WRRV+RPH +LKLE IL+G+ +++ G LITETMLI+ +
Sbjct: 118 LNLANLVSLKVDAVDELLWRRVNRPHPALKLEDILDGISKFAEDYNGTLITETMLIDGLT 177
Query: 180 YGNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEY 239
E+ERIA+FL + PDKAY+AIPTRPPAE V+ A + + A ++F + + VE
Sbjct: 178 TLEEVERIAEFLESVSPDKAYLAIPTRPPAEN-VRGAEIDFVLEAGRIFKKHV---DVEL 233
Query: 240 LIGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRK 278
LI E F +ED+L+I +VHP+RED +K L+K
Sbjct: 234 LIEPEKGEFEIKN--KEDILAIASVHPIREDILKSYLKK 270
>pir||G72271 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981846|gb|AAD36362.1|AE001784_4 (AE001784)
conserved hypothetical protein [Thermotoga maritima]
Length = 308
Score = 189 bits (474), Expect = 5e-47
Identities = 113/305 (37%), Positives = 171/305 (56%), Gaps = 12/305 (3%)
Query: 4 FGPVPSRRLGRSLGVNNIPDKVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVERKVR 63
+G VPS+RLGRSLGV+ IP K C+Y+CVYCQ+G+T V+RQ F+ P K+FEE E K
Sbjct: 8 YGIVPSKRLGRSLGVSPIPFKTCTYSCVYCQLGRTTNFTVKRQTFF-PLKVFEE-ELKGF 65
Query: 64 EATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDL-GIKLAILTNSSLVWREDVRDDLQ 122
R + D V+ V +GEPTL L L K + G + ++TN SL W E VR + +
Sbjct: 66 VKRHRYD-FDVVSIVGEGEPTLYTPLDALIDLCKSITGKPVVLITNGSLFWSEKVRKEAK 124
Query: 123 NFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLININYGN 182
D+I L A EK +R + +PHK+L +K+ EG+ R E+ G++ E ML+
Sbjct: 125 LSDIIMPTLSAWDEKSFRTIHKPHKNLSFQKVFEGLKKFRREYSGEIWLEVMLVKGLNDF 184
Query: 183 ELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEKVEYLIG 242
LE + + + +++ D+ Y+ +P RPPAE WV+P EE I A +LF A
Sbjct: 185 ALEELKEKISQVESDRVYVNVPVRPPAEGWVEPPDEETIEKAKELFNAASIETPA----- 239
Query: 243 YEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLIE-LEYN 301
+ F G + +L++ HPM E+ V++LL V + +R K ++ +EY+
Sbjct: 240 --ASRFIAAGEGIDAVLNVIKRHPMNEEEVRDLLTSQKIDPKPVLEKLRSCKNVKIIEYS 297
Query: 302 GVKFY 306
G ++Y
Sbjct: 298 GRRYY 302
>pir||F81331 hypothetical protein Cj1244 [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6968677|emb|CAB73498.1|
(AL139077) hypothetical protein Cj1244 [Campylobacter
jejuni]
Length = 300
Score = 131 bits (325), Expect = 1e-29
Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 19/310 (6%)
Query: 2 IAFGPVPSRRLGRSLGVNNIPDKV-CSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
I FGPV SRR GRSLG++ P K C++ CVYC++ K Q ++ E +KI EV+
Sbjct: 3 ILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPK-KAQEKQDEIISIDKIISEVKA 61
Query: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGI--KLAILTNSSLVWREDVR 118
+ E+ D++T +GEP+L L + L+ + KL IL+N + V ED
Sbjct: 62 ML----EKNVEFDFLTLTANGEPSLYPYLNELILSLRSIAKDKKLLILSNGTAVLDEDKF 117
Query: 119 DDLQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLINI 178
+ L D++ LD+ K + R+DR K++ LEK++E M R F G LI E +++
Sbjct: 118 NALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADFRARFNGDLIMEILVVKD 177
Query: 179 NYGN--ELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAIGSEK 236
N E E + L+++ P + ++ RPPA K + E+++ L+ + + + K
Sbjct: 178 LNDNEEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSEEKLLELSKLIDSTPVLLAK 237
Query: 237 VEYLIGYEGNAFAFTGNVEEDLLSITAVHPMREDAVKELLRKANASWDVVEKLIREGKLI 296
YEG +F EE+LL + +H + + ++ S ++ +LI+E K+
Sbjct: 238 RH----YEGEKLSFN---EEELLKM--LHLRSQSEIDIEVKFDEQSKTLLNQLIKEKKVK 288
Query: 297 ELEYNGVKFY 306
L+ GVKFY
Sbjct: 289 ILDLAGVKFY 298
>sp|Q9ZMV6|Y117_HELPJ HYPOTHETICAL PROTEIN HP0117/JHP0109 >gi|7464609|pir||C71972
hypothetical protein jhp0109 - Helicobacter pylori
(strain J99) >gi|4154625|gb|AAD05696.1| (AE001450)
putative [Helicobacter pylori J99]
Length = 308
Score = 125 bits (311), Expect = 6e-28
Identities = 82/236 (34%), Positives = 130/236 (54%), Gaps = 12/236 (5%)
Query: 2 IAFGPVPSRRLGRSLGVNNIPDKV-CSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
I FGPV SRR G+SLGV+ P K C+Y C+YC++GK ++ +E + ++
Sbjct: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIE-RMEEVIKVETLISTIQN 66
Query: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDL--GIKLAILTNSSLVWREDVR 118
+ T ID +T +GEPTL +L + +K G+K IL+N SL + V+
Sbjct: 67 ALNNLTTP---IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQ 123
Query: 119 DDLQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLIN- 177
L+ FD++ LDA+ K + RVD+P+ S + KILEG+L +QG+L+ E +LI
Sbjct: 124 QALKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILSFSQIYQGQLVAEVLLIKG 182
Query: 178 -INYGNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAI 232
+ N L+ IADFL+++ + ++ RP + K K + +E+ L LF E +
Sbjct: 183 VNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDEL--LKCSLFFEGL 236
>sp|P56080|Y117_HELPY HYPOTHETICAL PROTEIN HP0117 >gi|7463962|pir||E64534 conserved
hypothetical protein HP0117 - Helicobacter pylori
(strain 26695) >gi|2313199|gb|AAD07185.1| (AE000533)
conserved hypothetical protein [Helicobacter pylori
26695]
Length = 308
Score = 121 bits (301), Expect = 1e-26
Identities = 81/236 (34%), Positives = 129/236 (54%), Gaps = 12/236 (5%)
Query: 2 IAFGPVPSRRLGRSLGVNNIPDKV-CSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
I FGPV SRR G+SLGV+ P K C+Y C+YC++GK ++ +E + ++
Sbjct: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIE-RMEEVIKVETLINAIQN 66
Query: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDL--GIKLAILTNSSLVWREDVR 118
+ T ID +T +GEPTL +L + +K G+K IL+N SL + V+
Sbjct: 67 ALNNLTTP---IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQ 123
Query: 119 DDLQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLIN- 177
L+ FD++ LDA+ K + RVD+P+ S + KILEG+L +QG+L+ E +LI
Sbjct: 124 QALKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQGQLVAEVLLIKG 182
Query: 178 -INYGNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAI 232
+ N L+ IA FL+++ + ++ RP + K K + +E+ L LF E +
Sbjct: 183 VNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDEL--LKCSLFFEGL 236
>sp|P74557|YE64_SYNY3 HYPOTHETICAL 29.3 KD PROTEIN SLR1464 >gi|7469730|pir||S76752
hypothetical protein - Synechocystis sp. (strain PCC
6803) >gi|1653753|dbj|BAA18664.1| (D90916) hypothetical
protein [Synechocystis sp.]
Length = 265
Score = 112 bits (277), Expect = 6e-24
Identities = 74/206 (35%), Positives = 111/206 (52%), Gaps = 8/206 (3%)
Query: 4 FGPVPSRRLGRSLGVNNIPD-KVCSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVERKV 62
+GPV S R GRSLG++ I CS+ CVYCQ+G+ + +RQ F I E+
Sbjct: 9 YGPVNSWRYGRSLGIDPIGAISTCSFNCVYCQLGEIEHLSGDRQIFIPTADILREL---- 64
Query: 63 REATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDLGIKLA-ILTNSSLVWREDVRDDL 121
A +D +T GEPTL NLG+ +K L KL +LTN++L+ VR++L
Sbjct: 65 --AQFAPWEVDVITLSGSGEPTLAKNLGEILEGIKKLTGKLTLVLTNATLLNDAQVREEL 122
Query: 122 QNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLININYG 181
D IS+KLD + +R++RP ++LE+IL G+ + EF G+L +TM++
Sbjct: 123 SLADKISVKLDGLWPDQLQRINRPIAGIELEQILTGIQTFQQEFTGELSVQTMVLQPWDQ 182
Query: 182 NELERIADFLRELKPDKAYIAIPTRP 207
R + L +KP + + PTRP
Sbjct: 183 TTENRYLELLSLIKPTEVQLNRPTRP 208
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.400
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118331594
Number of Sequences: 2977
Number of extensions: 5074660
Number of successful extensions: 13691
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 13658
Number of HSP's gapped (non-prelim): 10
length of query: 314
length of database: 189,106,746
effective HSP length: 56
effective length of query: 258
effective length of database: 155,591,474
effective search space: 40142600292
effective search space used: 40142600292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)