BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0578 (PAB0578) DE:Hypothetical protein
(286 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75132 hypothetical protein PAB0578 - Pyrococcus abyssi (st... 577 e-164
pir||A71090 hypothetical protein PH0982 - Pyrococcus horikoshii ... 545 e-154
pir||E69023 cell division inhibitor related protein - Methanobac... 193 2e-48
pir||C72272 hypothetical protein TM1292 - Thermotoga maritima (s... 169 2e-41
pir||H75132 hypothetical protein PAB0579 - Pyrococcus abyssi (st... 159 5e-38
pir||B71090 hypothetical protein PH0983 - Pyrococcus horikoshii ... 152 5e-36
sp|Q57998|Y578_METJA HYPOTHETICAL PROTEIN MJ0578 >gi|2127885|pir... 138 1e-31
pir||D69023 cell division inhibitor related protein - Methanobac... 137 1e-31
pir||B72272 iron-sulfur cluster-binding protein - Thermotoga mar... 136 2e-31
gi|11499957 iron-sulfur cluster binding protein [Archaeoglobus f... 131 1e-29
sp|Q57999|Y579_METJA HYPOTHETICAL PROTEIN MJ0579 >gi|2127804|pir... 129 3e-29
gi|11499958 iron-sulfur cluster binding protein [Archaeoglobus f... 120 2e-26
>pir||G75132 hypothetical protein PAB0578 - Pyrococcus abyssi (strain Orsay)
>gi|5458287|emb|CAB49776.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 286
Score = 577 bits (1472), Expect = e-164
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQF 60
MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQF
Sbjct: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQF 60
Query: 61 MPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR 120
MPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR
Sbjct: 61 MPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR 120
Query: 121 LIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTVS 180
LIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTVS
Sbjct: 121 LIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTVS 180
Query: 181 KAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKYN 240
KAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKYN
Sbjct: 181 KAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKYN 240
Query: 241 AKVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKVYEFLR 286
AKVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKVYEFLR
Sbjct: 241 AKVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKVYEFLR 286
>pir||A71090 hypothetical protein PH0982 - Pyrococcus horikoshii
>gi|3257396|dbj|BAA30079.1| (AP000004) 286aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 286
Score = 545 bits (1389), Expect = e-154
Identities = 266/286 (93%), Positives = 277/286 (96%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQF 60
MQIA+SGGKGGTGKSTVAIN+AVELAKKF LVLADLDVEAPNDHLLLGVELQNEREVHQF
Sbjct: 1 MQIAVSGGKGGTGKSTVAINLAVELAKKFKLVLADLDVEAPNDHLLLGVELQNEREVHQF 60
Query: 61 MPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR 120
MPKFNY+KCIKCRKCAE CEEHAIVTL+DGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR
Sbjct: 61 MPKFNYSKCIKCRKCAEACEEHAIVTLRDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR 120
Query: 121 LIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTVS 180
LIGHTYET TPYGFTLVTGKLREGEERSMPLVVAAKRRAKEL WDLL+VDTAAGTGNTVS
Sbjct: 121 LIGHTYETLTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELKWDLLIVDTAAGTGNTVS 180
Query: 181 KAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKYN 240
KAIEGSQLLIAVTEPTPLGIHDTELIL+LG+LM IETW+VINRSDLGDV EVYRRA+KYN
Sbjct: 181 KAIEGSQLLIAVTEPTPLGIHDTELILKLGELMRIETWIVINRSDLGDVKEVYRRAKKYN 240
Query: 241 AKVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKVYEFLR 286
A+VIAEIPYSENIVKTYV GKPIVTTD PEA +FREIAEKVYEFLR
Sbjct: 241 AEVIAEIPYSENIVKTYVAGKPIVTTDYPEAGIFREIAEKVYEFLR 286
>pir||E69023 cell division inhibitor related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622281|gb|AAB85663.1| (AE000886) cell division
inhibitor related protein [Methanobacterium
thermoautotrophicum]
Length = 291
Score = 193 bits (485), Expect = 2e-48
Identities = 101/272 (37%), Positives = 164/272 (60%), Gaps = 10/272 (3%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQF 60
+ +AI+GGKGGTGKST+A ++A+ LA KF ++L D DVE P+DH++L V+ + EV
Sbjct: 4 LMVAITGGKGGTGKSTIACSLAIALADKFRVLLVDTDVECPDDHIILSVQRRKTDEVTLQ 63
Query: 61 MPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSR 120
+P F+++ C C KC+EVC ++AIV ++ P L+ CSGC C + C AI++
Sbjct: 64 IPSFDFSACSMCGKCSEVCRKNAIVFVEGRHPILVRDRCSGCGTCSLSCR-NNAIKDEDM 122
Query: 121 LIGHTYETKTP--------YGFTLVTGKLREGEERSMPLVVAAKRRAKE-LTWDLLVVDT 171
+ G Y+ K P F L++G+ E S LV + + A+E D +++DT
Sbjct: 123 VAGFLYDGKLPENYDEKIRRNFRLLSGETTVNIESSARLVDSLMKNARENHDMDFIIIDT 182
Query: 172 AAGTGNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNE 231
AAG V AI + L AVTEPTP G HD +LIL+L + + + + +++NR+ +G+ +
Sbjct: 183 AAGVHCNVIHAIMDANLAFAVTEPTPFGSHDLKLILELLERLDVTSSIILNRAGIGNADP 242
Query: 232 VYRRAEKYNAKVIAEIPYSENIVKTYVVGKPI 263
V + + ++AEI YS+++++ Y G+P+
Sbjct: 243 VLEVSRETGRPIVAEIEYSKDLMEAYSGGEPL 274
>pir||C72272 hypothetical protein TM1292 - Thermotoga maritima (strain MSB8)
>gi|4981850|gb|AAD36366.1|AE001784_8 (AE001784)
iron-sulfur cluster-binding protein, putative
[Thermotoga maritima]
Length = 283
Score = 169 bits (425), Expect = 2e-41
Identities = 98/285 (34%), Positives = 152/285 (52%), Gaps = 4/285 (1%)
Query: 2 QIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQFM 61
+I + GKGGTGK+TV++N+A L++ + + L D DVE PNDH+ V++ E VH +
Sbjct: 3 KITVLSGKGGTGKTTVSVNMAKALSESYRVQLLDADVEEPNDHIFFNVDVSFEEPVHLMI 62
Query: 62 PKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGSRL 121
P + + CI+C +CA C+ AI GT F+ +LC GC AC I+CPV AI E +
Sbjct: 63 PVVDNSVCIRCGECASTCQFGAISVFPSGT-FVFESLCHGCGACSIMCPV-NAISERPKE 120
Query: 122 IGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTVSK 181
IG + G L GE +P++ K+ E D+++VD GT V +
Sbjct: 121 IGKIRFGTADGNISFGMGILNIGERTGVPVIRKLKKHIDEKA-DVVIVDAPPGTSCPVVE 179
Query: 182 AIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKYNA 241
++ + + VTEPT G+HD +L ++L K MGI + +V+NR G+ + A++
Sbjct: 180 SLRNTDFALLVTEPTAFGLHDLKLAVELTKEMGIPSGIVVNRYIPGN-TIIEEFADEEGI 238
Query: 242 KVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKVYEFLR 286
V+ +IP+ I GK IV + F E+ EK+ +R
Sbjct: 239 PVLLKIPFKREIASLCAEGKLIVEAFQDMKKDFLELFEKIEVMVR 283
>pir||H75132 hypothetical protein PAB0579 - Pyrococcus abyssi (strain Orsay)
>gi|5458288|emb|CAB49777.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 297
Score = 159 bits (397), Expect = 5e-38
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 9/292 (3%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGV-ELQNERE-VH 58
MQI I+ GKGG GKS+V ++ L ++ L+ D D EAPN LLLGV E + ERE +
Sbjct: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
Query: 59 QFMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEG 118
+ + N CI+C C C I +G + C GC C +VCPVPG I
Sbjct: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
Query: 119 SRLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRA----KELTWDLLVVDTAAG 174
G + T YGF +++ +L G S LV K A KE + ++VD+AAG
Sbjct: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
Query: 175 TGNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLG-DVNEVY 233
G V ++ G+ + I + EPTP + D + + ++ + G +++IN++D+ ++
Sbjct: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
Query: 234 RRAEKYNAKVIAEIPYSENIVKTYVVGKPIVTT--DLPEAELFREIAEKVYE 283
AE ++ EIPY +I ++ + KP + D +E REIAE++ E
Sbjct: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKE 292
>pir||B71090 hypothetical protein PH0983 - Pyrococcus horikoshii
>gi|3257397|dbj|BAA30080.1| (AP000004) 300aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 300
Score = 152 bits (380), Expect = 5e-36
Identities = 93/292 (31%), Positives = 150/292 (50%), Gaps = 9/292 (3%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGV-ELQNERE-VH 58
MQ+ I+ GKGG GKS++ ++ L ++ L+ D D EAPN LLLGV E + ERE +
Sbjct: 4 MQVVIASGKGGVGKSSITASLLYLLKDEYKLIAVDADAEAPNLGLLLGVTEWEIEREHIG 63
Query: 59 QFMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEG 118
+ + N CI+C C C I ++G + C GC C +VCPVPG I
Sbjct: 64 AKIARINPESCIRCGLCQMRCPYECIYVDEEGNYVVNELTCEGCNVCGLVCPVPGTITLE 123
Query: 119 SRLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRA----KELTWDLLVVDTAAG 174
G + T YGF +++ +L G+ S LV K A KE + ++VD+AAG
Sbjct: 124 EVRSGIIRKATTKYGFPIISAQLDVGKPESGKLVTEEKEWASKIMKEEGLEHMIVDSAAG 183
Query: 175 TGNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLG-DVNEVY 233
G V ++ G+ + I + EPTP + D + + ++ + +++IN++D+ ++
Sbjct: 184 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFREPAYLIINKADINPGFTKLR 243
Query: 234 RRAEKYNAKVIAEIPYSENIVKTYVVGKPIVTT--DLPEAELFREIAEKVYE 283
AE ++ E+PY +I ++ + KP V D +E R IAE++ E
Sbjct: 244 EWAESEGIPILGEVPYDSSIPRSMSMLKPFVEAFPDSKASEAIRGIAERIKE 295
>sp|Q57998|Y578_METJA HYPOTHETICAL PROTEIN MJ0578 >gi|2127885|pir||B64372 ferredoxin -
Methanococcus jannaschii >gi|1591285|gb|AAB98569.1|
(U67506) iron-sulfer cluster binding protein
[Methanococcus jannaschii]
Length = 276
Score = 138 bits (343), Expect = 1e-31
Identities = 88/286 (30%), Positives = 149/286 (51%), Gaps = 18/286 (6%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREV-HQ 59
M+IAI GKGG GKS+++ ++A +K+FN+V D DV+APN +L+ V+ + EV ++
Sbjct: 8 MKIAIISGKGGVGKSSISTSLAKLFSKEFNIVALDCDVDAPNFNLMFDVKDKKLLEVIYR 67
Query: 60 FMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGS 119
+ + N CI+C KC +VC+ AI K + P LC GC ACE++C AIE
Sbjct: 68 EIYEIN-DDCIRCGKCLDVCQFDAIGDFK-----INPILCEGCGACELICEF-DAIEPIK 120
Query: 120 RLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTV 179
R G+ YE GF L+ G+L GE S ++ K AK+ +L ++D G G +
Sbjct: 121 RESGYIYEGFV--GFPLIWGELEVGESGSGKIIEHIKNHAKKYKAELGIIDGPPGVGCPL 178
Query: 180 SKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKY 239
++ L + + EPT ++D +++ +E +V N+ + ++N Y
Sbjct: 179 ISTVKDVDLALCIVEPTKSSVNDCLRLIETLNFFNVEYLIVENKKGMNNIN--------Y 230
Query: 240 NAKVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKVYEFL 285
K+ IP+ ++ K + ++ +E +E+ EK+ EF+
Sbjct: 231 PFKIFHSIPFDFDVPKLIANKILLCDSNSKVSESIKELYEKLKEFI 276
>pir||D69023 cell division inhibitor related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622280|gb|AAB85662.1| (AE000886) cell division
inhibitor related protein [Methanobacterium
thermoautotrophicum]
Length = 298
Score = 137 bits (342), Expect = 1e-31
Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 10/289 (3%)
Query: 2 QIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQFM 61
++ I GKGG GKS++ ++AV LA + ++L D DV+ PN L++G E E +
Sbjct: 3 EVCILSGKGGAGKSSIVASMAVLLADRAEIILGDCDVDTPNLALIMGSSGDVECETIRAS 62
Query: 62 PK--FNYAKCIKCRKCAEVCEEHAIV-TLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEG 118
K KC +KC VC +AI + K+ P + LC GC AC +CP AI+
Sbjct: 63 EKAFLMAEKCKSRKKCVRVCRFNAIKWSAKNSKPEINEFLCEGCGACAYICP-DRAIDIK 121
Query: 119 SRLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELT----WDLLVVDTAAG 174
G K+ YGF +V+G L+ GE S +V + +R+ E+ DL ++D+AAG
Sbjct: 122 EVDTGKICYFKSDYGFPVVSGHLKIGERGSGKIVDSLRRKVSEIGRAEGMDLALLDSAAG 181
Query: 175 TGNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGD--VNEV 232
G V +++G I VTEPT I+D++ ++L GI ++IN+ DL E+
Sbjct: 182 IGCPVVSSVKGCDRAIIVTEPTKAAINDSKRAIELVSHFGIPHSIIINKYDLNHEIAAEI 241
Query: 233 YRRAEKYNAKVIAEIPYSENIVKTYVVGKPIVTTDLPEAELFREIAEKV 281
A++ ++ IPY V G P V + +LFR + +++
Sbjct: 242 EDLADRNEIPIMGIIPYDLAFTDALVNGLPAVIFNPHLKKLFRGMVDEL 290
>pir||B72272 iron-sulfur cluster-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981849|gb|AAD36365.1|AE001784_7 (AE001784)
iron-sulfur cluster-binding protein [Thermotoga
maritima]
Length = 288
Score = 136 bits (340), Expect = 2e-31
Identities = 101/293 (34%), Positives = 150/293 (50%), Gaps = 21/293 (7%)
Query: 2 QIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVELQNEREVHQFM 61
QIA+ GKGGTGK+T ++ V L N +LAD DV+A N ++L + E E ++
Sbjct: 3 QIAVVSGKGGTGKTTFTASLGVLLE---NSLLADCDVDASNLYILFPGDPVEEHEYYRGK 59
Query: 62 PK-FNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTL-CSGCRACEIVCPVPGAIEEGS 119
+ KC +C C VC AI+ G + + C GC AC + CP AI
Sbjct: 60 KAVIDQEKCDRCGICERVCRFDAIIP---GEKYGVDQYACEGCNACVVSCP-RNAITLVQ 115
Query: 120 RLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKR----RAKELTWDLLVVDTAAGT 175
L G Y G +V +L GEE S LV ++ +AKEL D +++D A G
Sbjct: 116 SLAGR-YFFAWSGGKPIVYARLSPGEENSGGLVAEVRKLALEKAKELKRDYVIIDGAPGI 174
Query: 176 GNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRR 235
G + + +I G ++ VTEPT G+HD + I++ K + E +VIN+ D+ V V R
Sbjct: 175 GCSATSSIVGVNYVVVVTEPTMSGLHDLKRIVETLKCLKREFGIVINKYDINSV--VSRE 232
Query: 236 AEKY----NAKVIAEIPYSENIVKTYVVGKPIVT-TDLPEAELFREIAEKVYE 283
E Y ++ +IP+ E +V+ V KP+VT + P AE ++I EK+ E
Sbjct: 233 IEDYCLSEGLDLLGKIPFDETVVRASVECKPVVTYENSPAAESIKKIVEKIIE 285
>gi|11499957 iron-sulfur cluster binding protein [Archaeoglobus fulgidus]
>gi|7430152|pir||D69547 iron-sulfur cluster binding
protein homolog - Archaeoglobus fulgidus
>gi|2650716|gb|AAB91285.1| (AE001112) iron-sulfur
cluster binding protein [Archaeoglobus fulgidus]
Length = 262
Score = 131 bits (325), Expect = 1e-29
Identities = 84/262 (32%), Positives = 143/262 (54%), Gaps = 18/262 (6%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLV-LADLDVEAPNDHLLLGVELQNEREVHQ 59
M+IA++ GKGGTGK+TVA+N+AV FN + L DLDVE PND + + E + E ++
Sbjct: 1 MRIAVASGKGGTGKTTVAVNLAV-----FNHIDLFDLDVEEPNDRIFIKGEAE-EWPAYR 54
Query: 60 FMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGS 119
+P+ C C C +VC+ AI + P +P LC C AC +CP A+EE
Sbjct: 55 KVPEVR-ENCNACGVCKDVCQYSAIYVIDKAYP--LPELCHSCGACIYLCPEK-AMEEVD 110
Query: 120 RLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTV 179
G K+ TL G++R GE ++ L+ ++ KEL ++D+ G +
Sbjct: 111 YQTGKIVRVKSD--ITLTYGEMRIGEASAVFLI----KQVKELMGKNAIIDSPPGASCPM 164
Query: 180 SKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKY 239
+++ + +I V EPTP G+HD ++ ++ +G++ VV+N+ L + + R ++
Sbjct: 165 VESVSDADYVILVAEPTPFGLHDLKIAAEVVSDLGLKFGVVVNKHGL-PFDGIERYCKEG 223
Query: 240 NAKVIAEIPYSENIVKTYVVGK 261
+++ +IP+S+ I + Y G+
Sbjct: 224 GVEILGKIPFSKEIAEKYSRGE 245
>sp|Q57999|Y579_METJA HYPOTHETICAL PROTEIN MJ0579 >gi|2127804|pir||C64372 cell division
inhibitor homolog - Methanococcus jannaschii
>gi|1591286|gb|AAB98570.1| (U67506) cell division
inhibitor minD-like [Methanococcus jannaschii]
Length = 269
Score = 129 bits (322), Expect = 3e-29
Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 20/262 (7%)
Query: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGVE-LQNEREVHQ 59
M +A++GGKGGTGKST++ N+ + + L D DVE PN L G E L REV
Sbjct: 5 MIVAVTGGKGGTGKSTLSANLFFYFIENYKTALIDCDVETPNLPYLTGCEDLFLAREVFI 64
Query: 60 FMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGS 119
+P K VC+E A++ + D F+ LCSGC+AC I I
Sbjct: 65 EVPNIEEGKTYNYNN---VCKEGALLKVGDKLIFI-EDLCSGCKACGI----NSNITFKK 116
Query: 120 RLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWDLLVVDTAAGTGNTV 179
+ IG YE K G+ L+ GK GE ++ +V K+ ++ +VDTAAGT V
Sbjct: 117 KSIGKIYEKKFDNGY-LIVGKSNLGERKTAKIVTETKKYGLSKNCEINIVDTAAGTHCNV 175
Query: 180 SKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLGDVNEVYRRAEKY 239
+A+ + ++ VTEPTP G+ D + I+++ + + I +V+NR + D+ Y
Sbjct: 176 VRALINADKVLIVTEPTPFGVSDAKRIIKVVEKLNIPYKIVLNRYGISDLKIGYN----- 230
Query: 240 NAKVIAEIPYSENIVKTYVVGK 261
+IPY + IV+ Y G+
Sbjct: 231 -----FKIPYDKRIVECYCKGE 247
>gi|11499958 iron-sulfur cluster binding protein [Archaeoglobus fulgidus]
>gi|7430150|pir||E69547 iron-sulfur cluster binding
protein homolog - Archaeoglobus fulgidus
>gi|2650715|gb|AAB91284.1| (AE001112) iron-sulfur
cluster binding protein [Archaeoglobus fulgidus]
Length = 283
Score = 120 bits (298), Expect = 2e-26
Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 2 QIAISGGKGGTGKSTVAINV-AVELAKKFNLVLADLDVEAPNDHLLLGVE-LQNEREVHQ 59
Q+A+ GKGGTGK+T + + A+E V+AD DV+APN H+LL + L+ E +
Sbjct: 3 QVAVISGKGGTGKTTFSATIHALEGG-----VVADCDVDAPNLHILLKPQILKAEDFIAS 57
Query: 60 FMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEGS 119
+ KC C C ++C A+V +DG ++ C GC C VCP AIE +
Sbjct: 58 KKARIMPEKCSSCGLCYDLCRFGAVVA-EDGY-YVDEKKCEGCAFCFNVCP-ERAIEMEN 114
Query: 120 RLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRAKELTWD----LLVVDTAAGT 175
G Y +KT +G+ V +L+ GEE + LV K RAKE+ + L+VD+A G
Sbjct: 115 VKTGDLYVSKTEWGY-FVHARLKPGEENTGRLVTEVKNRAKEIAEESNAEFLIVDSAPGV 173
Query: 176 GNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDL--GDVNEVY 233
G V ++ G I VTEPT G+ D IL+L + I +VV+N+ DL +E+
Sbjct: 174 GCPVMASLTGVDAAIIVTEPTVSGLSDMLRILELCEHFRIRPFVVVNKFDLNVNIASEIE 233
Query: 234 RRAEKYNAKVIAEIPYSENI 253
+ + +P+ + I
Sbjct: 234 SYCSENGVEFAGRVPFDKAI 253
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.137 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110111537
Number of Sequences: 2977
Number of extensions: 4687302
Number of successful extensions: 13292
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 13248
Number of HSP's gapped (non-prelim): 12
length of query: 286
length of database: 189,106,746
effective HSP length: 56
effective length of query: 230
effective length of database: 155,591,474
effective search space: 35786039020
effective search space used: 35786039020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)