BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0579 (PAB0579) DE:Hypothetical protein
(297 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75132 hypothetical protein PAB0579 - Pyrococcus abyssi (st... 600 e-171
pir||B71090 hypothetical protein PH0983 - Pyrococcus horikoshii ... 578 e-164
gi|11499958 iron-sulfur cluster binding protein [Archaeoglobus f... 183 3e-45
pir||D69023 cell division inhibitor related protein - Methanobac... 182 4e-45
pir||B72272 iron-sulfur cluster-binding protein - Thermotoga mar... 174 1e-42
sp|Q57998|Y578_METJA HYPOTHETICAL PROTEIN MJ0578 >gi|2127885|pir... 164 1e-39
pir||G75132 hypothetical protein PAB0578 - Pyrococcus abyssi (st... 159 5e-38
pir||A71090 hypothetical protein PH0982 - Pyrococcus horikoshii ... 155 6e-37
pir||C72272 hypothetical protein TM1292 - Thermotoga maritima (s... 145 8e-34
gi|11499957 iron-sulfur cluster binding protein [Archaeoglobus f... 113 2e-24
pir||E69023 cell division inhibitor related protein - Methanobac... 111 8e-24
sp|Q57999|Y579_METJA HYPOTHETICAL PROTEIN MJ0579 >gi|2127804|pir... 103 2e-21
>pir||H75132 hypothetical protein PAB0579 - Pyrococcus abyssi (strain Orsay)
>gi|5458288|emb|CAB49777.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 297
Score = 600 bits (1531), Expect = e-171
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG
Sbjct: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
Query: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE
Sbjct: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
Query: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG
Sbjct: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
Query: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR
Sbjct: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKEEIIKG 297
EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKEEIIKG
Sbjct: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKEEIIKG 297
>pir||B71090 hypothetical protein PH0983 - Pyrococcus horikoshii
>gi|3257397|dbj|BAA30080.1| (AP000004) 300aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 300
Score = 578 bits (1473), Expect = e-164
Identities = 280/297 (94%), Positives = 293/297 (98%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
MQ+VIASGKGGVGKSS+TASLLYLLKDEY+LIAVDADAEAPNLGLLLGVTEWE EREHIG
Sbjct: 4 MQVVIASGKGGVGKSSITASLLYLLKDEYKLIAVDADAEAPNLGLLLGVTEWEIEREHIG 63
Query: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
AKIARIN E+CIRCGLCQMRCPYECIY+D+EGNYVVNELTCEGCNVCGLVCPVPGTITLE
Sbjct: 64 AKIARINPESCIRCGLCQMRCPYECIYVDEEGNYVVNELTCEGCNVCGLVCPVPGTITLE 123
Query: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
EVRSG+IRKATTKYGFPIISAQLDVG+PESGKLVTEEKEWASKIMKE+GLEHMIVDSAAG
Sbjct: 124 EVRSGIIRKATTKYGFPIISAQLDVGKPESGKLVTEEKEWASKIMKEEGLEHMIVDSAAG 183
Query: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHF EPAYLIINKADINPGFTKLR
Sbjct: 184 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFREPAYLIINKADINPGFTKLR 243
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKEEIIKG 297
EWAE+EGIPILGE+PYDSSIPRSMSMLKPF+EAFPDSKASEAIR IAERIKEEI+KG
Sbjct: 244 EWAESEGIPILGEVPYDSSIPRSMSMLKPFVEAFPDSKASEAIRGIAERIKEEILKG 300
>gi|11499958 iron-sulfur cluster binding protein [Archaeoglobus fulgidus]
>gi|7430150|pir||E69547 iron-sulfur cluster binding
protein homolog - Archaeoglobus fulgidus
>gi|2650715|gb|AAB91284.1| (AE001112) iron-sulfur
cluster binding protein [Archaeoglobus fulgidus]
Length = 283
Score = 183 bits (459), Expect = 3e-45
Identities = 105/293 (35%), Positives = 170/293 (57%), Gaps = 16/293 (5%)
Query: 2 QIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIGA 61
Q+ + SGKGG GK++ +A++ L + D D +APNL +LL + E + I +
Sbjct: 3 QVAVISGKGGTGKTTFSATIHALEGG----VVADCDVDAPNLHILLKPQILKAE-DFIAS 57
Query: 62 KIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLEE 121
K ARI E C CGLC C + + +D Y V+E CEGC C VCP I +E
Sbjct: 58 KKARIMPEKCSSCGLCYDLCRFGAVVAED--GYYVDEKKCEGCAFCFNVCP-ERAIEMEN 114
Query: 122 VRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAGI 181
V++G + + T++G+ + A+L G +G+LVTE K A +I +E E +IVDSA G+
Sbjct: 115 VKTGDLYVSKTEWGY-FVHARLKPGEENTGRLVTEVKNRAKEIAEESNAEFLIVDSAPGV 173
Query: 182 GCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGF-TKLR 240
GC V+AS+ G D AI++ EPT + LSD+ R+ ++ +HF ++++NK D+N +++
Sbjct: 174 GCPVMASLTGVDAAIIVTEPTVSGLSDMLRILELCEHFRIRPFVVVNKFDLNVNIASEIE 233
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDS-KASEAIREIAERIKE 292
+ G+ G +P+D +IP ++ L FP S KA++ + EI ++++E
Sbjct: 234 SYCSENGVEFAGRVPFDKAIPEQIANLN-----FPFSGKAADKMVEIWKKLRE 281
>pir||D69023 cell division inhibitor related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622280|gb|AAB85662.1| (AE000886) cell division
inhibitor related protein [Methanobacterium
thermoautotrophicum]
Length = 298
Score = 182 bits (458), Expect = 4e-45
Identities = 99/258 (38%), Positives = 149/258 (57%), Gaps = 3/258 (1%)
Query: 2 QIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIGA 61
++ I SGKGG GKSS+ AS+ LL D +I D D + PNL L++G + E +
Sbjct: 3 EVCILSGKGGAGKSSIVASMAVLLADRAEIILGDCDVDTPNLALIMGSSGDVECETIRAS 62
Query: 62 KIARINSETCIRCGLCQMRCPYECI-YIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
+ A + +E C C C + I + +NE CEGC C +CP I ++
Sbjct: 63 EKAFLMAEKCKSRKKCVRVCRFNAIKWSAKNSKPEINEFLCEGCGACAYICP-DRAIDIK 121
Query: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
EV +G I + YGFP++S L +G SGK+V + S+I + +G++ ++DSAAG
Sbjct: 122 EVDTGKICYFKSDYGFPVVSGHLKIGERGSGKIVDSLRRKVSEIGRAEGMDLALLDSAAG 181
Query: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGF-TKL 239
IGC V++SV G D AI++ EPT A+++D +R ++V HFG P +IINK D+N ++
Sbjct: 182 IGCPVVSSVKGCDRAIIVTEPTKAAINDSKRAIELVSHFGIPHSIIINKYDLNHEIAAEI 241
Query: 240 REWAENEGIPILGEIPYD 257
+ A+ IPI+G IPYD
Sbjct: 242 EDLADRNEIPIMGIIPYD 259
>pir||B72272 iron-sulfur cluster-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981849|gb|AAD36365.1|AE001784_7 (AE001784)
iron-sulfur cluster-binding protein [Thermotoga
maritima]
Length = 288
Score = 174 bits (437), Expect = 1e-42
Identities = 104/294 (35%), Positives = 173/294 (58%), Gaps = 10/294 (3%)
Query: 2 QIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIGA 61
QI + SGKGG GK++ TASL LL++ + D D +A NL +L + EE E+
Sbjct: 3 QIAVVSGKGGTGKTTFTASLGVLLENS---LLADCDVDASNLYILFP-GDPVEEHEYYRG 58
Query: 62 KIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLEE 121
K A I+ E C RCG+C+ C ++ I ++ Y V++ CEGCN C + CP ITL +
Sbjct: 59 KKAVIDQEKCDRCGICERVCRFDAIIPGEK--YGVDQYACEGCNACVVSCP-RNAITLVQ 115
Query: 122 VRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAGI 181
+G A + G PI+ A+L G SG LV E ++ A + KE +++I+D A GI
Sbjct: 116 SLAGRYFFAWSG-GKPIVYARLSPGEENSGGLVAEVRKLALEKAKELKRDYVIIDGAPGI 174
Query: 182 GCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTK-LR 240
GC +S+ G + +++ EPT + L D++R+ + ++ ++INK DIN ++ +
Sbjct: 175 GCSATSSIVGVNYVVVVTEPTMSGLHDLKRIVETLKCLKREFGIVINKYDINSVVSREIE 234
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKEEI 294
++ +EG+ +LG+IP+D ++ R+ KP + + +S A+E+I++I E+I E+I
Sbjct: 235 DYCLSEGLDLLGKIPFDETVVRASVECKPVV-TYENSPAAESIKKIVEKIIEKI 287
>sp|Q57998|Y578_METJA HYPOTHETICAL PROTEIN MJ0578 >gi|2127885|pir||B64372 ferredoxin -
Methanococcus jannaschii >gi|1591285|gb|AAB98569.1|
(U67506) iron-sulfer cluster binding protein
[Methanococcus jannaschii]
Length = 276
Score = 164 bits (410), Expect = 1e-39
Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 25/294 (8%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
M+I I SGKGGVGKSS++ SL L E+ ++A+D D +APN L+ V + ++ E I
Sbjct: 8 MKIAIISGKGGVGKSSISTSLAKLFSKEFNIVALDCDVDAPNFNLMFDVKD-KKLLEVIY 66
Query: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
+I IN + CIRCG C C ++ I G++ +N + CEGC C L+C ++
Sbjct: 67 REIYEINDD-CIRCGKCLDVCQFDAI-----GDFKINPILCEGCGACELICEFDAIEPIK 120
Query: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
SG I + GFP+I +L+VG SGK++ K A K E G I+D G
Sbjct: 121 R-ESGYIYEGFV--GFPLIWGELEVGESGSGKIIEHIKNHAKKYKAELG----IIDGPPG 173
Query: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
+GC +I++V D+A+ I EPT +S++D R+ + + F ++ NK +N
Sbjct: 174 VGCPLISTVKDVDLALCIVEPTKSSVNDCLRLIETLNFFNVEYLIVENKKGMN------- 226
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKEEI 294
N I IP+D +P+ ++ + +SK SE+I+E+ E++KE I
Sbjct: 227 --NINYPFKIFHSIPFDFDVPKLIA--NKILLCDSNSKVSESIKELYEKLKEFI 276
>pir||G75132 hypothetical protein PAB0578 - Pyrococcus abyssi (strain Orsay)
>gi|5458287|emb|CAB49776.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 286
Score = 159 bits (397), Expect = 5e-38
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 9/292 (3%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
MQI I+ GKGG GKS+V ++ L ++ L+ D D EAPN LLLGV E + ERE +
Sbjct: 1 MQIAISGGKGGTGKSTVAINVAVELAKKFNLVLADLDVEAPNDHLLLGV-ELQNERE-VH 58
Query: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
+ + N CI+C C C I +G + C GC C +VCPVPG I
Sbjct: 59 QFMPKFNYAKCIKCRKCAEVCEEHAIVTLKDGTPFLMPTLCSGCRACEIVCPVPGAIEEG 118
Query: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
G + T YGF +++ +L G S LV K A KE + ++VD+AAG
Sbjct: 119 SRLIGHTYETKTPYGFTLVTGKLREGEERSMPLVVAAKRRA----KELTWDLLVVDTAAG 174
Query: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
G V ++ G+ + I + EPTP + D + + ++ + G +++IN++D+ ++
Sbjct: 175 TGNTVSKAIEGSQLLIAVTEPTPLGIHDTELILQLGKLMGIETWVVINRSDLG-DVNEVY 233
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKE 292
AE ++ EIPY +I ++ + KP + D +E REIAE++ E
Sbjct: 234 RRAEKYNAKVIAEIPYSENIVKTYVVGKPIVTT--DLPEAELFREIAEKVYE 283
>pir||A71090 hypothetical protein PH0982 - Pyrococcus horikoshii
>gi|3257396|dbj|BAA30079.1| (AP000004) 286aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 286
Score = 155 bits (388), Expect = 6e-37
Identities = 96/292 (32%), Positives = 148/292 (49%), Gaps = 9/292 (3%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
MQI ++ GKGG GKS+V +L L +++L+ D D EAPN LLLGV E + ERE +
Sbjct: 1 MQIAVSGGKGGTGKSTVAINLAVELAKKFKLVLADLDVEAPNDHLLLGV-ELQNERE-VH 58
Query: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
+ + N CI+C C C I +G + C GC C +VCPVPG I
Sbjct: 59 QFMPKFNYSKCIKCRKCAEACEEHAIVTLRDGTPFLMPTLCSGCRACEIVCPVPGAIEEG 118
Query: 121 EVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSAAG 180
G + T YGF +++ +L G S LV K A KE + +IVD+AAG
Sbjct: 119 SRLIGHTYETLTPYGFTLVTGKLREGEERSMPLVVAAKRRA----KELKWDLLIVDTAAG 174
Query: 181 IGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTKLR 240
G V ++ G+ + I + EPTP + D + + K+ + +++IN++D+ ++
Sbjct: 175 TGNTVSKAIEGSQLLIAVTEPTPLGIHDTELILKLGELMRIETWIVINRSDLG-DVKEVY 233
Query: 241 EWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIKE 292
A+ ++ EIPY +I ++ KP + D + REIAE++ E
Sbjct: 234 RRAKKYNAEVIAEIPYSENIVKTYVAGKPIVTT--DYPEAGIFREIAEKVYE 283
>pir||C72272 hypothetical protein TM1292 - Thermotoga maritima (strain MSB8)
>gi|4981850|gb|AAD36366.1|AE001784_8 (AE001784)
iron-sulfur cluster-binding protein, putative
[Thermotoga maritima]
Length = 283
Score = 145 bits (361), Expect = 8e-34
Identities = 94/294 (31%), Positives = 146/294 (48%), Gaps = 21/294 (7%)
Query: 2 QIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIGA 61
+I + SGKGG GK++V+ ++ L + YR+ +DAD E PN + V EE H+
Sbjct: 3 KITVLSGKGGTGKTTVSVNMAKALSESYRVQLLDADVEEPNDHIFFNVDVSFEEPVHL-- 60
Query: 62 KIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLEE 121
I +++ CIRCG C C + I + G +V L C GC C ++CPV I+
Sbjct: 61 MIPVVDNSVCIRCGECASTCQFGAISVFPSGTFVFESL-CHGCGACSIMCPV-NAISERP 118
Query: 122 VRSGVIRKATT----KYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDS 177
G IR T +G I++ G P KL E A + IVD+
Sbjct: 119 KEIGKIRFGTADGNISFGMGILNIGERTGVPVIRKLKKHIDEKADVV---------IVDA 169
Query: 178 AAGIGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFT 237
G C V+ S+ D A+L+ EPT L D++ ++ + G P+ +++N+ PG T
Sbjct: 170 PPGTSCPVVESLRNTDFALLVTEPTAFGLHDLKLAVELTKEMGIPSGIVVNR--YIPGNT 227
Query: 238 KLREWAENEGIPILGEIPYDSSIPRSMSMLKPFIEAFPDSKASEAIREIAERIK 291
+ E+A+ EGIP+L +IP+ I + K +EAF D K + E+ E+I+
Sbjct: 228 IIEEFADEEGIPVLLKIPFKREIASLCAEGKLIVEAFQDMK--KDFLELFEKIE 279
>gi|11499957 iron-sulfur cluster binding protein [Archaeoglobus fulgidus]
>gi|7430152|pir||D69547 iron-sulfur cluster binding
protein homolog - Archaeoglobus fulgidus
>gi|2650716|gb|AAB91285.1| (AE001112) iron-sulfur
cluster binding protein [Archaeoglobus fulgidus]
Length = 262
Score = 113 bits (281), Expect = 2e-24
Identities = 80/267 (29%), Positives = 123/267 (45%), Gaps = 27/267 (10%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLG--VTEWEEEREH 58
M+I +ASGKGG GK++V +L + D D E PN + + EW R
Sbjct: 1 MRIAVASGKGGTGKTTVAVNLAVF----NHIDLFDLDVEEPNDRIFIKGEAEEWPAYR-- 54
Query: 59 IGAKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTIT 118
K+ + E C CG+C+ C Y IY+ D+ Y + EL C C C +CP
Sbjct: 55 ---KVPEVR-ENCNACGVCKDVCQYSAIYVIDKA-YPLPEL-CHSCGACIYLCPEKA--- 105
Query: 119 LEEVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIVDSA 178
+EEV + K + ++ +G + L+ + KE K + I+DS
Sbjct: 106 MEEVDYQTGKIVRVKSDITLTYGEMRIGEASAVFLIKQVKELMGK--------NAIIDSP 157
Query: 179 AGIGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADINPGFTK 238
G C ++ SV AD IL+AEPTP L D++ +VV G +++NK + F
Sbjct: 158 PGASCPMVESVSDADYVILVAEPTPFGLHDLKIAAEVVSDLGLKFGVVVNKHGL--PFDG 215
Query: 239 LREWAENEGIPILGEIPYDSSIPRSMS 265
+ + + G+ ILG+IP+ I S
Sbjct: 216 IERYCKEGGVEILGKIPFSKEIAEKYS 242
>pir||E69023 cell division inhibitor related protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622281|gb|AAB85663.1| (AE000886) cell division
inhibitor related protein [Methanobacterium
thermoautotrophicum]
Length = 291
Score = 111 bits (276), Expect = 8e-24
Identities = 74/277 (26%), Positives = 131/277 (46%), Gaps = 15/277 (5%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
+ + I GKGG GKS++ SL L D++R++ VD D E P+ ++L V + + +
Sbjct: 4 LMVAITGGKGGTGKSTIACSLAIALADKFRVLLVDTDVECPDDHIILSVQ--RRKTDEVT 61
Query: 61 AKIARINSETCIRCGLCQMRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPGTITLE 120
+I + C CG C C I + + ++ C GC C L C I E
Sbjct: 62 LQIPSFDFSACSMCGKCSEVCRKNAIVFVEGRHPILVRDRCSGCGTCSLSCR-NNAIKDE 120
Query: 121 EVRSGVI--RKATTKY------GFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEH 172
++ +G + K Y F ++S + V S +LV + A + ++
Sbjct: 121 DMVAGFLYDGKLPENYDEKIRRNFRLLSGETTVNIESSARLVDSLMKNA---RENHDMDF 177
Query: 173 MIVDSAAGIGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADI 232
+I+D+AAG+ C VI ++ A++A + EPTP D++ + ++++ + +I+N+A I
Sbjct: 178 IIIDTAAGVHCNVIHAIMDANLAFAVTEPTPFGSHDLKLILELLERLDVTSSIILNRAGI 237
Query: 233 NPGFTKLREWAENEGIPILGEIPYDSSIPRSMSMLKP 269
L E + G PI+ EI Y + + S +P
Sbjct: 238 GNADPVL-EVSRETGRPIVAEIEYSKDLMEAYSGGEP 273
>sp|Q57999|Y579_METJA HYPOTHETICAL PROTEIN MJ0579 >gi|2127804|pir||C64372 cell division
inhibitor homolog - Methanococcus jannaschii
>gi|1591286|gb|AAB98570.1| (U67506) cell division
inhibitor minD-like [Methanococcus jannaschii]
Length = 269
Score = 103 bits (255), Expect = 2e-21
Identities = 68/238 (28%), Positives = 120/238 (49%), Gaps = 24/238 (10%)
Query: 1 MQIVIASGKGGVGKSSVTASLLYLLKDEYRLIAVDADAEAPNLGLLLGVTEWEEEREHIG 60
M + + GKGG GKS+++A+L + + Y+ +D D E PNL L G + RE +
Sbjct: 5 MIVAVTGGKGGTGKSTLSANLFFYFIENYKTALIDCDVETPNLPYLTGCEDLFLARE-VF 63
Query: 61 AKIARINS-ETCIRCGLCQ----MRCPYECIYIDDEGNYVVNELTCEGCNVCGLVCPVPG 115
++ I +T +C+ ++ + I+I+D C GC CG +
Sbjct: 64 IEVPNIEEGKTYNYNNVCKEGALLKVGDKLIFIED---------LCSGCKACG----INS 110
Query: 116 TITLEEVRSGVIRKATTKYGFPIISAQLDVGRPESGKLVTEEKEWASKIMKEQGLEHMIV 175
IT ++ G I + G+ I+ ++G ++ K+VTE K++ + E IV
Sbjct: 111 NITFKKKSIGKIYEKKFDNGYLIVGKS-NLGERKTAKIVTETKKYGLS----KNCEINIV 165
Query: 176 DSAAGIGCQVIASVGGADVAILIAEPTPASLSDVQRVYKVVQHFGEPAYLIINKADIN 233
D+AAG C V+ ++ AD +++ EPTP +SD +R+ KVV+ P +++N+ I+
Sbjct: 166 DTAAGTHCNVVRALINADKVLIVTEPTPFGVSDAKRIIKVVEKLNIPYKIVLNRYGIS 223
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.137 0.402
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113597299
Number of Sequences: 2977
Number of extensions: 4892634
Number of successful extensions: 16779
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 16730
Number of HSP's gapped (non-prelim): 12
length of query: 297
length of database: 189,106,746
effective HSP length: 55
effective length of query: 242
effective length of database: 156,189,961
effective search space: 37797970562
effective search space used: 37797970562
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 165 (68.7 bits)