BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0584 832252 832557 102 !not a gene!
         (102 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||B71088 hypothetical protein PH0967 - Pyrococcus horikoshii ...   145  1e-34

>pir||B71088 hypothetical protein PH0967 - Pyrococcus horikoshii
           >gi|3257381|dbj|BAA30064.1| (AP000004) 113aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 113
           
 Score =  145 bits (362), Expect = 1e-34
 Identities = 72/80 (90%), Positives = 75/80 (93%)

Query: 1   MSYLTSISDSLFRSSRATWSKGAWAGTLITTPVALSGSTNSAGSIITSSPVTGFLTYFPI 60
           MSY +SIS SLF+SSRATWS GAWAGTLITTPVALSGSTNSAG IITSSP+TGFLTYFPI
Sbjct: 34  MSYFSSISVSLFKSSRATWSNGAWAGTLITTPVALSGSTNSAGKIITSSPLTGFLTYFPI 93

Query: 61  SFSPLNSSITSISLSWNESL 80
           SFSPLNSSITSISLSW ESL
Sbjct: 94  SFSPLNSSITSISLSWKESL 113


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.315    0.126    0.362 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35455270
Number of Sequences: 2977
Number of extensions: 1232093
Number of successful extensions: 4483
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4482
Number of HSP's gapped (non-prelim): 1
length of query: 102
length of database: 189,106,746
effective HSP length: 57
effective length of query: 45
effective length of database: 154,992,987
effective search space: 6974684415
effective search space used: 6974684415
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 158 (66.0 bits)