BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0589 (PAB0589) DE:Hypothetical protein
         (1109 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G75134 hypothetical protein PAB0589 - Pyrococcus abyssi (st...  2202  0.0
pir||F71079 hypothetical protein PH0902 - Pyrococcus horikoshii ...  1067  0.0
pir||A72311 conserved hypothetical protein - Thermotoga maritima...  1057  0.0
pir||G72734 hypothetical protein APE0415 - Aeropyrum pernix (str...   164  4e-39
gi|11499919 A. fulgidus predicted coding region AF2338 [Archaeog...   106  2e-21

>pir||G75134 hypothetical protein PAB0589 - Pyrococcus abyssi (strain Orsay)
            >gi|5458303|emb|CAB49792.1| (AJ248285) hypothetical
            protein [Pyrococcus abyssi]
            Length = 1109
            
 Score = 2202 bits (5642), Expect = 0.0
 Identities = 1109/1109 (100%), Positives = 1109/1109 (100%)

Query: 1    MRYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRT 60
            MRYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRT
Sbjct: 1    MRYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRT 60

Query: 61   FEGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGER 120
            FEGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGER
Sbjct: 61   FEGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGER 120

Query: 121  ISSLSDVIVVPVYGKGELPRPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTSPTPELI 180
            ISSLSDVIVVPVYGKGELPRPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTSPTPELI
Sbjct: 121  ISSLSDVIVVPVYGKGELPRPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTSPTPELI 180

Query: 181  REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI 240
            REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI
Sbjct: 181  REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI 240

Query: 241  PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI 300
            PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI
Sbjct: 241  PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI 300

Query: 301  DEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRTRDL 360
            DEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRTRDL
Sbjct: 301  DEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRTRDL 360

Query: 361  IRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEKL 420
            IRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEKL
Sbjct: 361  IRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEKL 420

Query: 421  KEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKD 480
            KEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKD
Sbjct: 421  KEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKD 480

Query: 481  AVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFV 540
            AVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFV
Sbjct: 481  AVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFV 540

Query: 541  KERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKIIF 600
            KERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKIIF
Sbjct: 541  KERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKIIF 600

Query: 601  MYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQMS 660
            MYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQMS
Sbjct: 601  MYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQMS 660

Query: 661  MVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVD 720
            MVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVD
Sbjct: 661  MVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVD 720

Query: 721  DFDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIELEI 780
            DFDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIELEI
Sbjct: 721  DFDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIELEI 780

Query: 781  GIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEVVR 840
            GIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEVVR
Sbjct: 781  GIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEVVR 840

Query: 841  KGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVRGE 900
            KGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVRGE
Sbjct: 841  KGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVRGE 900

Query: 901  FQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVTWT 960
            FQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVTWT
Sbjct: 901  FQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVTWT 960

Query: 961  IIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDVDSTE 1020
            IIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDVDSTE
Sbjct: 961  IIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDVDSTE 1020

Query: 1021 TLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVKLDEG 1080
            TLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVKLDEG
Sbjct: 1021 TLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVKLDEG 1080

Query: 1081 ITINDLLFEKLRPLSGRVTFRIKKGEGNE 1109
            ITINDLLFEKLRPLSGRVTFRIKKGEGNE
Sbjct: 1081 ITINDLLFEKLRPLSGRVTFRIKKGEGNE 1109


>pir||F71079 hypothetical protein PH0902 - Pyrococcus horikoshii
            >gi|3257313|dbj|BAA29996.1| (AP000004) 1105aa long
            hypothetical protein [Pyrococcus horikoshii]
            Length = 1105
            
 Score = 1067 bits (2730), Expect = 0.0
 Identities = 544/1110 (49%), Positives = 762/1110 (68%), Gaps = 15/1110 (1%)

Query: 2    RYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRTF 61
            ++EVW+DVLD+ LDE  APEL  ++ G AP IY D  EFFKRTYFT  ++EIL+++++T 
Sbjct: 5    KHEVWEDVLDEKLDEEVAPELYKIVEGNAPTIYLDSVEFFKRTYFTSSIVEILEKVIKTL 64

Query: 62   EGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGERI 121
             G E+ NV LIYSLFGGGK+HT+L++YHA R+P AL ++EVL       REK++E+    
Sbjct: 65   RGDEKNNVILIYSLFGGGKSHTLLSVYHALRNPRALREKEVLEGQRRNIREKLEELSYLA 124

Query: 122  SSLSDVIVVPVYGKGELPRPRKPRDGK-KTIWGYIADLLGEYEKVRVEDETLTSPTPELI 180
             +++  I++ V+G+  + +P  P +GK +T+WGYIA  LG+YE V   D+ LT P  E++
Sbjct: 125  ENINARIII-VHGQTNIGQPSTPLNGKIRTVWGYIAHSLGKYELVEDYDKNLTVPPIEVL 183

Query: 181  REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI 240
             ++     VL LIDEI  ++  + +S +EE+RNY+ NV+ FL +LA AL  ++S+M++T+
Sbjct: 184  VKLFQEENVLLLIDEIAHHVQTLSRSANEEDRNYAENVANFLHNLAKALTVTRSIMILTL 243

Query: 241  PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI 300
            PME EG+V   E  YDR  +  +  AVT+V G  +YSP++  G+ENEL+E+LK+RIFK I
Sbjct: 244  PMEGEGKV---EDLYDRKTVNSIWSAVTKVAGHNLYSPMRTEGRENELIEVLKKRIFKRI 300

Query: 301  DEEEKAKVLSELREAYSNKNVFGENVKF-EEIRKSYPFHPEYVEVLRTIIERVGLQRTRD 359
            DE EK +VL +LRE  SN+ +FG +  F E +  SYPFHPEY+EVLR IIER  LQRTRD
Sbjct: 301  DEGEKERVLLKLREVMSNREIFGISSSFLESLEASYPFHPEYIEVLRNIIERTSLQRTRD 360

Query: 360  LIRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEK 419
            LI+ITRIV+R+L+     P +IMP+HI   D+ IKG  F K T ++DY TV+E DI++EK
Sbjct: 361  LIKITRIVVRKLINA--PPEIIMPYHIDPEDEAIKGLFFGKRTTFADYKTVFEVDISEEK 418

Query: 420  LKEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIK 479
            +K   NPEL +IIL YIFL+TYP+DSP     FPTPE IARGVYEPE F+  NWLP DIK
Sbjct: 419  VKTLSNPELGKIILRYIFLKTYPFDSPRPHPGFPTPESIARGVYEPETFEKNNWLPADIK 478

Query: 480  DAVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRF 539
            D +EEI  SVKFMYL K+D   WFWR ANVS+ V SK  EL++T  G+V   LVK   +F
Sbjct: 479  DTIEEIGKSVKFMYLAKKDKTFWFWRRANVSKFVESKARELIETSYGDVWLSLVKYADKF 538

Query: 540  VKERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKII 599
            ++E KSL   R+  E  + FFK N +IVT++ QE +DTPEYKL V+VRDDV  D L ++I
Sbjct: 539  IREGKSLRRKRSS-EGEIPFFKKNMIIVTKDPQELRDTPEYKLEVIVRDDVSRDTLERLI 597

Query: 600  FMYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQM 659
            F   +  RTY+N++VV Y+A   ++ + +  A ++ACDEV K I+  + K+G+DV  IQ 
Sbjct: 598  FFENTSARTYRNTVVVCYLAEKSLDTLIELTARVLACDEVMKEIKAIYGKFGKDVEEIQK 657

Query: 660  SMVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIV 719
            +MV +I  KALEDLE+Q +  F+ VAYP+ D  K+V A ASS+SV+ENVYSALVS+GKIV
Sbjct: 658  NMVREIMEKALEDLENQFIISFKHVAYPEGDKVKIVDAPASSRSVVENVYSALVSRGKIV 717

Query: 720  DD-FDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIEL 778
            ++  DFEWL D   +V +      GY  SEL  +  +NPRLPM++ + L E I+ AV +L
Sbjct: 718  EEEADFEWLRDVLAEVGID-FPGRGYTFSELRNVFRTNPRLPMIADKVLTEIIRKAVEKL 776

Query: 779  EIGIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEV 838
             IGIER G I+FKK+YKE+P EEEKG+PPA + +KDVILPRE AL RQ+  LL  E + +
Sbjct: 777  MIGIERGGRIFFKKIYKEIPSEEEKGHPPANIEVKDVILPREVALQRQLCSLLNEEKDLI 836

Query: 839  VRKGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVR 898
              K    Y ++ WYE+++P  +  IPLRS+V +     E    +LWGYIVE++E+  I+ 
Sbjct: 837  AEKNGEKYRIKVWYEIHIPEENLAIPLRSIVGEECEVKEDLNRILWGYIVEKREQKKIME 896

Query: 899  GEFQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVT 958
            GEF++ VS   I G+PG+ + +EV VKP+  + FTV L ++FG+L   EV+L+G + +V 
Sbjct: 897  GEFEISVSRASITGKPGEEVEVEVTVKPISDDEFTVSLSSSFGKLEVDEVELKGGKVRVK 956

Query: 959  WT-IIVPEEREIARIEGRS-ESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDV 1016
            W   I+  +RE+  I G+S + +  E ++ +IP L E+++EV E+KEEHKG +LL +  +
Sbjct: 957  WRGRILKVKREVV-IRGKSNKGKEAEAKILLIPKL-EDVIEVKEIKEEHKGYLLLSVHSI 1014

Query: 1017 DSTETLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVK 1076
               ++L+ I  +G   GS+  E+PLW   F  + LEV K+I+KE++E   S   +++ V 
Sbjct: 1015 KDVDSLDRIEFKGSASGSLEFEEPLWRTEFQDVDLEVFKHIVKEMKEFFESNPTINVDVV 1074

Query: 1077 LDEGITINDLLFEKLRPLSGRVTFRIKKGE 1106
              E + INDL+ EKLRPL G+V FR+K+ E
Sbjct: 1075 ASEEVVINDLVIEKLRPLFGKVKFRLKRRE 1104


>pir||A72311 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
            >gi|4981527|gb|AAD36067.1|AE001760_17 (AE001760)
            conserved hypothetical protein [Thermotoga maritima]
            Length = 1123
            
 Score = 1057 bits (2704), Expect = 0.0
 Identities = 549/1129 (48%), Positives = 768/1129 (67%), Gaps = 38/1129 (3%)

Query: 3    YEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRTFE 62
            YEVW+DVLD+S D   APELGDV TG AP IY DP+EFFKRTYFTD  +EIL +IL TFE
Sbjct: 6    YEVWEDVLDESFDSQVAPELGDVYTGEAPEIYRDPKEFFKRTYFTDATVEILKRILDTFE 65

Query: 63   GKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGERIS 122
            GKER+N+FLIYSLFGGGKTH +LT+YHAF+ P AL D EVL  Y PEKRE I+E+ ERI 
Sbjct: 66   GKERRNIFLIYSLFGGGKTHLLLTLYHAFKTPEALEDPEVLEGYIPEKRETIRELAERIK 125

Query: 123  SLSDVI-VVPVYGKGELPRPRKPRD----GKKTIWGYIADLLGEYEKVRVEDETLTSPTP 177
             L + + VVPVYGKG + +P  P +      KTIWGYIA  LG+Y  V   D+ LT P  
Sbjct: 126  LLGESVKVVPVYGKGRVGQPSIPLNVDPYSVKTIWGYIAHSLGKYSIVEKNDKNLTVPDI 185

Query: 178  ELIREIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMV 237
            E +R++    +VL LIDEI DY+DN+  S  EE+R Y+ NV  F+D L++AL  S S MV
Sbjct: 186  ETLRDLFKGERVLLLIDEIADYVDNLHNSGAEEDRRYAGNVDNFIDRLSSALSNSTSSMV 245

Query: 238  MTIPMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIF 297
            +T+PM EE   L+ ++EY+  V+  +  AV RVGGA  Y+PV+  G  +ELVE+LK+RIF
Sbjct: 246  ITLPMTEERGNLRTQEEYNHSVVRALWDAVRRVGGADSYTPVRTVGINDELVEVLKKRIF 305

Query: 298  KGIDEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRT 357
            K +D + + + L  +R   ++  +FG     +EI ++YPFHPEY+++LRTIIE+  LQRT
Sbjct: 306  KHVDPDIRRRTLERIRSETNDVEIFGHGGFAQEIPRTYPFHPEYIQILRTIIEKTDLQRT 365

Query: 358  RDLIRITRIVMRELL----KRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYET 413
            RD+IRITRIV+R L+    K G +PA+I+P HI L +D+I+G LF + + ++DY ++ + 
Sbjct: 366  RDMIRITRIVVRNLIDRYEKEGFAPAIILPIHIDLTNDRIRGMLFGEKSKFADYASIIDA 425

Query: 414  D-INDEKLKEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKN 472
            + +NDEK + FR+PELAR+ILTYIFLRTYP+D+P  L++FPT   I+R +Y+PE F  K 
Sbjct: 426  ELVNDEKYRAFRHPELARMILTYIFLRTYPFDAPTPLNDFPTLTTISRAIYDPETFSKKQ 485

Query: 473  WLPVDIKDAVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISEL 532
            W+P DIKD VEEI     F++LN++D   WFWRVANV++MV+SK EEL+ +  GE+ ++L
Sbjct: 486  WIPADIKDTVEEIESHPHFVFLNRKDGVFWFWRVANVTKMVDSKTEELIQSNYGEIWNQL 545

Query: 533  VKKVHRFVKERKSLVSSRAK---IEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDD 589
            V+ V + V+E+KS+ ++R K   +E+HV FF+   VIV++E QE  D   YKL VLV +D
Sbjct: 546  VRYVDQLVREKKSIATTRGKGSTVEEHVRFFE--QVIVSKEPQELMDNEMYKLFVLVSED 603

Query: 590  VDEDMLRKIIFMYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKK 649
            VDE +L+ I+F  GSG+RTYKN++VV Y   G M+ +  + A  MAC  V   ++E + K
Sbjct: 604  VDEKLLKGIVFQIGSGSRTYKNTVVVCYPIPGTMKHLIMTTARDMACQRVMDTVKEMYGK 663

Query: 650  YGEDVVRIQMSMVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVY 709
            YGEDVV+IQ++ + DIR +ALEDLE+QIV  FR VAYP KDG     A ASSKSV+ENVY
Sbjct: 664  YGEDVVKIQLNQLRDIRNRALEDLENQIVGSFRKVAYPVKDGIDTADAPASSKSVVENVY 723

Query: 710  SALVSQGKIVDDFDF----EWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTE 765
            SAL  +GKI ++FDF     WL    E++ + +L+PEGY VSEL  +I SNP  PMV  E
Sbjct: 724  SALKGRGKIAEEFDFIEFANWLK---ENIGLNILKPEGYCVSELRKIICSNPSAPMVDFE 780

Query: 766  RLYEAIKDAVIELEIGIERDGVIYFKKVYKELPK-EEEKGNPPATVRLKDVILPREEALN 824
             L ++IK+AV +L+IG+ER G I FK+VY E+P   +E G   + V   D+ILP  EAL 
Sbjct: 781  NLKKSIKEAVRKLKIGLERKGKILFKRVYSEIPDFAQESGVEISKVEPDDIILPANEALR 840

Query: 825  RQVLELLKRESEEVVRKGNVDYSVRRWYEVYLPNSSSLIPLRSVV----RDGKVKDEYFE 880
            RQV ELLK+E +E +R G      R WYE+YLP+S     L+++V     + ++ DE  E
Sbjct: 841  RQVCELLKQEKDE-IRDGK---RYRVWYEIYLPSSEFSELLKNLVTVENEECQIGDE--E 894

Query: 881  GVLWGYIVERKEETPIVRGEFQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNF 940
             V++G I+E+KEE  I +GEF LEV+   ++G+PG+ + + V++   G     +EL + +
Sbjct: 895  AVMYGLILEKKEEVEIKKGEFDLEVARRSVEGKPGEKVEIPVRITAFG--DAEIELSSEY 952

Query: 941  GELGSQEVKL-EGEEKKVTWTIIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVG 999
            GEL  Q V L EGE  ++ W + +P E+++ +IE +SE +    E+ ++P +E  ++E  
Sbjct: 953  GELSYQNVFLREGESLEILWNMTIPSEKKVVKIEAKSEEKMIPKEIVLVPKVESSVLETN 1012

Query: 1000 EVKEEHKGNVLLEILDVDSTETLELIP--VEGRVVGSMRIEKPLWEARFDGLSLEVAKYI 1057
             + E HKG  L+ +  +   +TL+ +P   EG V G +  EKP W+ +F     +  +YI
Sbjct: 1013 TLDETHKGMFLVSVKSIRDLDTLKSLPEDFEGVVSGRLETEKPEWKVQFSETDRKTFEYI 1072

Query: 1058 LKEIEEVLGSKARLDLRVKLDEGITINDLLFEKLRPLSGRVTFRIKKGE 1106
              E+E+ LG+KA LD+  +L E   INDL+FEKL+PL+G+V+F +KKG+
Sbjct: 1073 AGELEDFLGTKALLDVNFRLSEPQMINDLIFEKLKPLNGKVSFILKKGD 1121


>pir||G72734 hypothetical protein APE0415 - Aeropyrum pernix (strain K1)
            >gi|5104055|dbj|BAA79371.1| (AP000059) 1188aa long
            hypothetical protein [Aeropyrum pernix]
            Length = 1188
            
 Score =  164 bits (412), Expect = 4e-39
 Identities = 268/1158 (23%), Positives = 477/1158 (41%), Gaps = 193/1158 (16%)

Query: 12   QSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRTFEGKERQ---- 67
            ++L    A +LGD++ G AP    DP EFF RT+ TD M E++ +      G + +    
Sbjct: 14   KNLRYEPAVDLGDLVKGNAPIFIQDPAEFFSRTHLTDSMKELVIKAFMNLLGLKAETIGG 73

Query: 68   -------NVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEV----LRDYDPEKREKIKE 116
                   N+ L+ S  GGGKTH+++ +YH F+      D+E     LR  D +  + +  
Sbjct: 74   KRYTVSSNLILLPSDLGGGKTHSLILLYHVFKLVRDSHDKESVISKLRILDNDIADFVDG 133

Query: 117  IGERISSLS-DVIVVPVYGKGELPRPRKPRD--GK--KTIWGYIADLLGEYEKVRVEDET 171
              + I ++S +++V+        P P +P +  G+  KT+WGY+   LG Y+ V++ DE 
Sbjct: 134  NWDLIKNMSLNLVVIDCKYSDLAPSPVRPIEIGGRRVKTLWGYLGYELGRYDIVKISDER 193

Query: 172  LTSPTPELIREIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLG 231
             T+P  + + +++   + L LIDEI  Y D        +       +S FL +LA AL  
Sbjct: 194  ETAPYADDVSKLLNGSRALVLIDEIGRYYD--------QSGLEPTKISAFLMNLAEALSK 245

Query: 232  ---SQSVMVMTIPMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENEL 288
               S+  +V++IP E  G   + +   +     E+ RA+  V        +K  G+  +L
Sbjct: 246  YNVSEVAVVISIPYEVRGGGAEAKAGMEYVHRPELIRAINEVLSRPSVEIIKPVGR-RDL 304

Query: 289  VEILKRRIFKGIDEEEKAKVLSELREAYSN-------KNVFGENVKFEEIRKSYPFHPEY 341
             EIL++RIF     E K K  +EL     N       + +  +   + E  ++YPFHP +
Sbjct: 305  AEILRKRIFAHKKNELK-KFFNELVSREFNREYPAQVRRILDDRSFWREAEETYPFHPMF 363

Query: 342  VEVLRTIIERVG-LQRTRDLIRI---TRIVMRELL--KRGESPALIMPHHIPLNDDKIKG 395
            + VL  +  R+  LQRTRD I+I   T + ++E L     +   LIMPHHIPL   ++  
Sbjct: 364  LNVLEKLAYRLPYLQRTRDAIKIAVQTVLALKEGLFDALEDEINLIMPHHIPLFVSEVLD 423

Query: 396  SLFSKST--IYSDYWTVYETDI----NDEKLKEFRNPELARIILTYIFLRTYPYDS---- 445
                ++    Y  ++ +  +++    N   LK+    E    +++   L++   D     
Sbjct: 424  ETILRNAPDEYRVFYLILRSNVVVPENLGNLKKLSKEEFYERVMSRA-LKSLKEDEAKLG 482

Query: 446  -----------------PMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKDAVEEIRGS 488
                             PM++ EFPT   +   V   E          D K  +  +R  
Sbjct: 483  LKLASNIWLHSLVGLGLPMNMGEFPTTADLIYSVSPTE---------QDAKGVLGILRSV 533

Query: 489  VKFMYLN---KRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFVKERKS 545
            +  + ++   + D   WF+ +          VEEL++  +  V  E+ K     + E   
Sbjct: 534  LPQLIVHGDPESDSAKWFFTII-------PSVEELIEILKKNVTDEMAKNKLAELLE-SG 585

Query: 546  LVSSRA-----KIEDHVTFFKANNVIVTRET--QEFQDTPEYKLMVLVRDDVDEDMLRKI 598
            L+  R      K     + F    V+    T  +E  D+ +  L+V   D + +D L K+
Sbjct: 586  LIGRRGRGRPPKGYKEESVFAGYAVVKNAATIPKEILDSRDPALIVFA-DKISKDELFKV 644

Query: 599  IFMYGSGTRTYKNSIVVVYVASGGMEEMAK----------------------SMATIMAC 636
            +          +N+IVV+     GM E  K                      S+  I+  
Sbjct: 645  L--------KGRNNIVVLAPHVEGMGEEEKLAPEDIAGIRELAGLRGKTVWDSLLEILKY 696

Query: 637  DEVKKNIREKFKK--YGEDVVRIQMSMVEDIRRKALEDLES-----------------QI 677
                ++IRE+  +   GE VV+     ++++       +ES                 + 
Sbjct: 697  YVATESIREENLRAFLGEKVVKGDEEYLKELLNLLKTKVESKKDYYYIHSWNMINRCYRK 756

Query: 678  VHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVDDFDFEWLVDKFEDVNVK 737
            V+Y+R+     ++G  +     S K ++  V   L  +  I  +F  E ++   +D   K
Sbjct: 757  VYYYRLGQIRFEEGLSL----ESDKPILPLVEEFLREKELIPYEFKGENIISIVKDYLGK 812

Query: 738  VLRPEGYPVSELIYMIMSNPR--LPMVSTERLYEAIKDAVIELEIGIERDGVIYFKKVYK 795
              + E   V EL   I+S  +  +P++       A++D V  L+  I   G + +K ++K
Sbjct: 813  NPKEEPIKVGELWNFILSTDKANVPIIRYRDFIGAVEDLVKSLDYAIRVKGKLLWKPIFK 872

Query: 796  ELPKEE----EKGNP------PATVRLK---------------DVILPRE-EALNRQVLE 829
               KEE    ++GN           R+K               D  L RE E++    + 
Sbjct: 873  S--KEEADALDEGNKLLEKVREHLTRIKASWDDVELVYWEKVFDEWLIRETESIPSDKII 930

Query: 830  LLKRESEEVVRKGNVDYSVR---RWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGY 886
             +K  S +V    ++ + V+   +  +++      L+ L   + D  ++D+ +E V    
Sbjct: 931  KVKDRSGQVFDIRDIKFDVKNVIKSGKLFYEEKKYLVELNYELPDDILEDKEYE-VAGEV 989

Query: 887  IVERKEETPIVR--GEFQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELG 944
            IV+  E   +V+   +  L V     KG+    I   +K    G     VE+  N   L 
Sbjct: 990  IVKNYENEFLVKLQPDEGLSVEPSEFKGKSPLPIKFRLKAGRAGNYRIKVEVYGNGSILD 1049

Query: 945  SQEVKLEGEEKKVTWTIIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKE- 1003
            S+ + +  + + +   I + EE E    + +  S R    V +  I     V  G+++  
Sbjct: 1050 SRIISVSVKGEWIEEEITIGEEGEAVEEDAKLVSIRVNDVVGLPSITRVAKVYPGKIRGS 1109

Query: 1004 -EHKGNVLLEILDVDSTE 1020
                G  +    +VD+T+
Sbjct: 1110 LSVSGKAVSVSFNVDTTD 1127


>gi|11499919 A. fulgidus predicted coding region AF2338 [Archaeoglobus fulgidus]
           >gi|7483805|pir||B69542 hypothetical protein AF2338 -
           Archaeoglobus fulgidus >gi|2648188|gb|AAB88926.1|
           (AE000943) A. fulgidus predicted coding region AF2338
           [Archaeoglobus fulgidus]
           Length = 336
           
 Score =  106 bits (261), Expect = 2e-21
 Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 49/290 (16%)

Query: 21  ELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQIL-RTFEGKERQNVFLIYSLFGGG 79
           E  + ++G A   Y DP  F+K+T+FT+    IL ++L R     +     ++ + FGGG
Sbjct: 43  EFSNFLSGNAHPDYLDPARFYKKTHFTEDAKNILKRVLSRVTYDSDESYAIILDTTFGGG 102

Query: 80  KTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGERISSLSDVIVVPVYGKGELP 139
           KTHT++ IYH F++    ++         E ++ +K++G  I ++ DV +V + G     
Sbjct: 103 KTHTLIGIYHLFKNRDVAINFH-------EIKQILKDLG--IPAIPDVEIVAIDGHN--- 150

Query: 140 RPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTS----PTPELIREIIGR--RKVLFLI 193
                 D  + +W  I   LG        DETL S    PT + I   I +  + V+FLI
Sbjct: 151 -----IDPDENLWNVIGRQLG--------DETLASRKSPPTAQEIENAIRKVGKPVVFLI 197

Query: 194 DEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTIPMEEEGEVLKGEK 253
           DE+V YI  I  S     +N     S F+   AT      S++++TIP   E E  K E 
Sbjct: 198 DELVIYISKILDSEARIAQNKGFIHSLFVATEAT----KTSIVILTIP---ESEAYKKES 250

Query: 254 EYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGIDEE 303
           E  RD+     R  T++      +PV     + +++ ILK+R  K +DE+
Sbjct: 251 EILRDITAIAERGATKI------APV----AKEDIIRILKKRFVKEVDEK 290


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.318    0.139    0.389 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 413595169
Number of Sequences: 2977
Number of extensions: 18615925
Number of successful extensions: 54027
Number of sequences better than 1.0e-10: 5
Number of HSP's better than  0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 53991
Number of HSP's gapped (non-prelim): 7
length of query: 1109
length of database: 189,106,746
effective HSP length: 61
effective length of query: 1048
effective length of database: 152,599,039
effective search space: 159923792872
effective search space used: 159923792872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 170 (70.6 bits)