BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0589 (PAB0589) DE:Hypothetical protein
(1109 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75134 hypothetical protein PAB0589 - Pyrococcus abyssi (st... 2202 0.0
pir||F71079 hypothetical protein PH0902 - Pyrococcus horikoshii ... 1067 0.0
pir||A72311 conserved hypothetical protein - Thermotoga maritima... 1057 0.0
pir||G72734 hypothetical protein APE0415 - Aeropyrum pernix (str... 164 4e-39
gi|11499919 A. fulgidus predicted coding region AF2338 [Archaeog... 106 2e-21
>pir||G75134 hypothetical protein PAB0589 - Pyrococcus abyssi (strain Orsay)
>gi|5458303|emb|CAB49792.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 1109
Score = 2202 bits (5642), Expect = 0.0
Identities = 1109/1109 (100%), Positives = 1109/1109 (100%)
Query: 1 MRYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRT 60
MRYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRT
Sbjct: 1 MRYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRT 60
Query: 61 FEGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGER 120
FEGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGER
Sbjct: 61 FEGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGER 120
Query: 121 ISSLSDVIVVPVYGKGELPRPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTSPTPELI 180
ISSLSDVIVVPVYGKGELPRPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTSPTPELI
Sbjct: 121 ISSLSDVIVVPVYGKGELPRPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTSPTPELI 180
Query: 181 REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI 240
REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI
Sbjct: 181 REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI 240
Query: 241 PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI 300
PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI
Sbjct: 241 PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI 300
Query: 301 DEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRTRDL 360
DEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRTRDL
Sbjct: 301 DEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRTRDL 360
Query: 361 IRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEKL 420
IRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEKL
Sbjct: 361 IRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEKL 420
Query: 421 KEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKD 480
KEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKD
Sbjct: 421 KEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKD 480
Query: 481 AVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFV 540
AVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFV
Sbjct: 481 AVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFV 540
Query: 541 KERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKIIF 600
KERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKIIF
Sbjct: 541 KERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKIIF 600
Query: 601 MYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQMS 660
MYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQMS
Sbjct: 601 MYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQMS 660
Query: 661 MVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVD 720
MVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVD
Sbjct: 661 MVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVD 720
Query: 721 DFDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIELEI 780
DFDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIELEI
Sbjct: 721 DFDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIELEI 780
Query: 781 GIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEVVR 840
GIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEVVR
Sbjct: 781 GIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEVVR 840
Query: 841 KGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVRGE 900
KGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVRGE
Sbjct: 841 KGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVRGE 900
Query: 901 FQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVTWT 960
FQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVTWT
Sbjct: 901 FQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVTWT 960
Query: 961 IIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDVDSTE 1020
IIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDVDSTE
Sbjct: 961 IIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDVDSTE 1020
Query: 1021 TLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVKLDEG 1080
TLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVKLDEG
Sbjct: 1021 TLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVKLDEG 1080
Query: 1081 ITINDLLFEKLRPLSGRVTFRIKKGEGNE 1109
ITINDLLFEKLRPLSGRVTFRIKKGEGNE
Sbjct: 1081 ITINDLLFEKLRPLSGRVTFRIKKGEGNE 1109
>pir||F71079 hypothetical protein PH0902 - Pyrococcus horikoshii
>gi|3257313|dbj|BAA29996.1| (AP000004) 1105aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 1105
Score = 1067 bits (2730), Expect = 0.0
Identities = 544/1110 (49%), Positives = 762/1110 (68%), Gaps = 15/1110 (1%)
Query: 2 RYEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRTF 61
++EVW+DVLD+ LDE APEL ++ G AP IY D EFFKRTYFT ++EIL+++++T
Sbjct: 5 KHEVWEDVLDEKLDEEVAPELYKIVEGNAPTIYLDSVEFFKRTYFTSSIVEILEKVIKTL 64
Query: 62 EGKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGERI 121
G E+ NV LIYSLFGGGK+HT+L++YHA R+P AL ++EVL REK++E+
Sbjct: 65 RGDEKNNVILIYSLFGGGKSHTLLSVYHALRNPRALREKEVLEGQRRNIREKLEELSYLA 124
Query: 122 SSLSDVIVVPVYGKGELPRPRKPRDGK-KTIWGYIADLLGEYEKVRVEDETLTSPTPELI 180
+++ I++ V+G+ + +P P +GK +T+WGYIA LG+YE V D+ LT P E++
Sbjct: 125 ENINARIII-VHGQTNIGQPSTPLNGKIRTVWGYIAHSLGKYELVEDYDKNLTVPPIEVL 183
Query: 181 REIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTI 240
++ VL LIDEI ++ + +S +EE+RNY+ NV+ FL +LA AL ++S+M++T+
Sbjct: 184 VKLFQEENVLLLIDEIAHHVQTLSRSANEEDRNYAENVANFLHNLAKALTVTRSIMILTL 243
Query: 241 PMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGI 300
PME EG+V E YDR + + AVT+V G +YSP++ G+ENEL+E+LK+RIFK I
Sbjct: 244 PMEGEGKV---EDLYDRKTVNSIWSAVTKVAGHNLYSPMRTEGRENELIEVLKKRIFKRI 300
Query: 301 DEEEKAKVLSELREAYSNKNVFGENVKF-EEIRKSYPFHPEYVEVLRTIIERVGLQRTRD 359
DE EK +VL +LRE SN+ +FG + F E + SYPFHPEY+EVLR IIER LQRTRD
Sbjct: 301 DEGEKERVLLKLREVMSNREIFGISSSFLESLEASYPFHPEYIEVLRNIIERTSLQRTRD 360
Query: 360 LIRITRIVMRELLKRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYETDINDEK 419
LI+ITRIV+R+L+ P +IMP+HI D+ IKG F K T ++DY TV+E DI++EK
Sbjct: 361 LIKITRIVVRKLINA--PPEIIMPYHIDPEDEAIKGLFFGKRTTFADYKTVFEVDISEEK 418
Query: 420 LKEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKNWLPVDIK 479
+K NPEL +IIL YIFL+TYP+DSP FPTPE IARGVYEPE F+ NWLP DIK
Sbjct: 419 VKTLSNPELGKIILRYIFLKTYPFDSPRPHPGFPTPESIARGVYEPETFEKNNWLPADIK 478
Query: 480 DAVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRF 539
D +EEI SVKFMYL K+D WFWR ANVS+ V SK EL++T G+V LVK +F
Sbjct: 479 DTIEEIGKSVKFMYLAKKDKTFWFWRRANVSKFVESKARELIETSYGDVWLSLVKYADKF 538
Query: 540 VKERKSLVSSRAKIEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDDVDEDMLRKII 599
++E KSL R+ E + FFK N +IVT++ QE +DTPEYKL V+VRDDV D L ++I
Sbjct: 539 IREGKSLRRKRSS-EGEIPFFKKNMIIVTKDPQELRDTPEYKLEVIVRDDVSRDTLERLI 597
Query: 600 FMYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKKYGEDVVRIQM 659
F + RTY+N++VV Y+A ++ + + A ++ACDEV K I+ + K+G+DV IQ
Sbjct: 598 FFENTSARTYRNTVVVCYLAEKSLDTLIELTARVLACDEVMKEIKAIYGKFGKDVEEIQK 657
Query: 660 SMVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIV 719
+MV +I KALEDLE+Q + F+ VAYP+ D K+V A ASS+SV+ENVYSALVS+GKIV
Sbjct: 658 NMVREIMEKALEDLENQFIISFKHVAYPEGDKVKIVDAPASSRSVVENVYSALVSRGKIV 717
Query: 720 DD-FDFEWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTERLYEAIKDAVIEL 778
++ DFEWL D +V + GY SEL + +NPRLPM++ + L E I+ AV +L
Sbjct: 718 EEEADFEWLRDVLAEVGID-FPGRGYTFSELRNVFRTNPRLPMIADKVLTEIIRKAVEKL 776
Query: 779 EIGIERDGVIYFKKVYKELPKEEEKGNPPATVRLKDVILPREEALNRQVLELLKRESEEV 838
IGIER G I+FKK+YKE+P EEEKG+PPA + +KDVILPRE AL RQ+ LL E + +
Sbjct: 777 MIGIERGGRIFFKKIYKEIPSEEEKGHPPANIEVKDVILPREVALQRQLCSLLNEEKDLI 836
Query: 839 VRKGNVDYSVRRWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGYIVERKEETPIVR 898
K Y ++ WYE+++P + IPLRS+V + E +LWGYIVE++E+ I+
Sbjct: 837 AEKNGEKYRIKVWYEIHIPEENLAIPLRSIVGEECEVKEDLNRILWGYIVEKREQKKIME 896
Query: 899 GEFQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELGSQEVKLEGEEKKVT 958
GEF++ VS I G+PG+ + +EV VKP+ + FTV L ++FG+L EV+L+G + +V
Sbjct: 897 GEFEISVSRASITGKPGEEVEVEVTVKPISDDEFTVSLSSSFGKLEVDEVELKGGKVRVK 956
Query: 959 WT-IIVPEEREIARIEGRS-ESRRREVEVTIIPILEEEIVEVGEVKEEHKGNVLLEILDV 1016
W I+ +RE+ I G+S + + E ++ +IP L E+++EV E+KEEHKG +LL + +
Sbjct: 957 WRGRILKVKREVV-IRGKSNKGKEAEAKILLIPKL-EDVIEVKEIKEEHKGYLLLSVHSI 1014
Query: 1017 DSTETLELIPVEGRVVGSMRIEKPLWEARFDGLSLEVAKYILKEIEEVLGSKARLDLRVK 1076
++L+ I +G GS+ E+PLW F + LEV K+I+KE++E S +++ V
Sbjct: 1015 KDVDSLDRIEFKGSASGSLEFEEPLWRTEFQDVDLEVFKHIVKEMKEFFESNPTINVDVV 1074
Query: 1077 LDEGITINDLLFEKLRPLSGRVTFRIKKGE 1106
E + INDL+ EKLRPL G+V FR+K+ E
Sbjct: 1075 ASEEVVINDLVIEKLRPLFGKVKFRLKRRE 1104
>pir||A72311 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981527|gb|AAD36067.1|AE001760_17 (AE001760)
conserved hypothetical protein [Thermotoga maritima]
Length = 1123
Score = 1057 bits (2704), Expect = 0.0
Identities = 549/1129 (48%), Positives = 768/1129 (67%), Gaps = 38/1129 (3%)
Query: 3 YEVWDDVLDQSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRTFE 62
YEVW+DVLD+S D APELGDV TG AP IY DP+EFFKRTYFTD +EIL +IL TFE
Sbjct: 6 YEVWEDVLDESFDSQVAPELGDVYTGEAPEIYRDPKEFFKRTYFTDATVEILKRILDTFE 65
Query: 63 GKERQNVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGERIS 122
GKER+N+FLIYSLFGGGKTH +LT+YHAF+ P AL D EVL Y PEKRE I+E+ ERI
Sbjct: 66 GKERRNIFLIYSLFGGGKTHLLLTLYHAFKTPEALEDPEVLEGYIPEKRETIRELAERIK 125
Query: 123 SLSDVI-VVPVYGKGELPRPRKPRD----GKKTIWGYIADLLGEYEKVRVEDETLTSPTP 177
L + + VVPVYGKG + +P P + KTIWGYIA LG+Y V D+ LT P
Sbjct: 126 LLGESVKVVPVYGKGRVGQPSIPLNVDPYSVKTIWGYIAHSLGKYSIVEKNDKNLTVPDI 185
Query: 178 ELIREIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMV 237
E +R++ +VL LIDEI DY+DN+ S EE+R Y+ NV F+D L++AL S S MV
Sbjct: 186 ETLRDLFKGERVLLLIDEIADYVDNLHNSGAEEDRRYAGNVDNFIDRLSSALSNSTSSMV 245
Query: 238 MTIPMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIF 297
+T+PM EE L+ ++EY+ V+ + AV RVGGA Y+PV+ G +ELVE+LK+RIF
Sbjct: 246 ITLPMTEERGNLRTQEEYNHSVVRALWDAVRRVGGADSYTPVRTVGINDELVEVLKKRIF 305
Query: 298 KGIDEEEKAKVLSELREAYSNKNVFGENVKFEEIRKSYPFHPEYVEVLRTIIERVGLQRT 357
K +D + + + L +R ++ +FG +EI ++YPFHPEY+++LRTIIE+ LQRT
Sbjct: 306 KHVDPDIRRRTLERIRSETNDVEIFGHGGFAQEIPRTYPFHPEYIQILRTIIEKTDLQRT 365
Query: 358 RDLIRITRIVMRELL----KRGESPALIMPHHIPLNDDKIKGSLFSKSTIYSDYWTVYET 413
RD+IRITRIV+R L+ K G +PA+I+P HI L +D+I+G LF + + ++DY ++ +
Sbjct: 366 RDMIRITRIVVRNLIDRYEKEGFAPAIILPIHIDLTNDRIRGMLFGEKSKFADYASIIDA 425
Query: 414 D-INDEKLKEFRNPELARIILTYIFLRTYPYDSPMSLSEFPTPERIARGVYEPELFKSKN 472
+ +NDEK + FR+PELAR+ILTYIFLRTYP+D+P L++FPT I+R +Y+PE F K
Sbjct: 426 ELVNDEKYRAFRHPELARMILTYIFLRTYPFDAPTPLNDFPTLTTISRAIYDPETFSKKQ 485
Query: 473 WLPVDIKDAVEEIRGSVKFMYLNKRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISEL 532
W+P DIKD VEEI F++LN++D WFWRVANV++MV+SK EEL+ + GE+ ++L
Sbjct: 486 WIPADIKDTVEEIESHPHFVFLNRKDGVFWFWRVANVTKMVDSKTEELIQSNYGEIWNQL 545
Query: 533 VKKVHRFVKERKSLVSSRAK---IEDHVTFFKANNVIVTRETQEFQDTPEYKLMVLVRDD 589
V+ V + V+E+KS+ ++R K +E+HV FF+ VIV++E QE D YKL VLV +D
Sbjct: 546 VRYVDQLVREKKSIATTRGKGSTVEEHVRFFE--QVIVSKEPQELMDNEMYKLFVLVSED 603
Query: 590 VDEDMLRKIIFMYGSGTRTYKNSIVVVYVASGGMEEMAKSMATIMACDEVKKNIREKFKK 649
VDE +L+ I+F GSG+RTYKN++VV Y G M+ + + A MAC V ++E + K
Sbjct: 604 VDEKLLKGIVFQIGSGSRTYKNTVVVCYPIPGTMKHLIMTTARDMACQRVMDTVKEMYGK 663
Query: 650 YGEDVVRIQMSMVEDIRRKALEDLESQIVHYFRMVAYPDKDGPKVVQAQASSKSVIENVY 709
YGEDVV+IQ++ + DIR +ALEDLE+QIV FR VAYP KDG A ASSKSV+ENVY
Sbjct: 664 YGEDVVKIQLNQLRDIRNRALEDLENQIVGSFRKVAYPVKDGIDTADAPASSKSVVENVY 723
Query: 710 SALVSQGKIVDDFDF----EWLVDKFEDVNVKVLRPEGYPVSELIYMIMSNPRLPMVSTE 765
SAL +GKI ++FDF WL E++ + +L+PEGY VSEL +I SNP PMV E
Sbjct: 724 SALKGRGKIAEEFDFIEFANWLK---ENIGLNILKPEGYCVSELRKIICSNPSAPMVDFE 780
Query: 766 RLYEAIKDAVIELEIGIERDGVIYFKKVYKELPK-EEEKGNPPATVRLKDVILPREEALN 824
L ++IK+AV +L+IG+ER G I FK+VY E+P +E G + V D+ILP EAL
Sbjct: 781 NLKKSIKEAVRKLKIGLERKGKILFKRVYSEIPDFAQESGVEISKVEPDDIILPANEALR 840
Query: 825 RQVLELLKRESEEVVRKGNVDYSVRRWYEVYLPNSSSLIPLRSVV----RDGKVKDEYFE 880
RQV ELLK+E +E +R G R WYE+YLP+S L+++V + ++ DE E
Sbjct: 841 RQVCELLKQEKDE-IRDGK---RYRVWYEIYLPSSEFSELLKNLVTVENEECQIGDE--E 894
Query: 881 GVLWGYIVERKEETPIVRGEFQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNF 940
V++G I+E+KEE I +GEF LEV+ ++G+PG+ + + V++ G +EL + +
Sbjct: 895 AVMYGLILEKKEEVEIKKGEFDLEVARRSVEGKPGEKVEIPVRITAFG--DAEIELSSEY 952
Query: 941 GELGSQEVKL-EGEEKKVTWTIIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVG 999
GEL Q V L EGE ++ W + +P E+++ +IE +SE + E+ ++P +E ++E
Sbjct: 953 GELSYQNVFLREGESLEILWNMTIPSEKKVVKIEAKSEEKMIPKEIVLVPKVESSVLETN 1012
Query: 1000 EVKEEHKGNVLLEILDVDSTETLELIP--VEGRVVGSMRIEKPLWEARFDGLSLEVAKYI 1057
+ E HKG L+ + + +TL+ +P EG V G + EKP W+ +F + +YI
Sbjct: 1013 TLDETHKGMFLVSVKSIRDLDTLKSLPEDFEGVVSGRLETEKPEWKVQFSETDRKTFEYI 1072
Query: 1058 LKEIEEVLGSKARLDLRVKLDEGITINDLLFEKLRPLSGRVTFRIKKGE 1106
E+E+ LG+KA LD+ +L E INDL+FEKL+PL+G+V+F +KKG+
Sbjct: 1073 AGELEDFLGTKALLDVNFRLSEPQMINDLIFEKLKPLNGKVSFILKKGD 1121
>pir||G72734 hypothetical protein APE0415 - Aeropyrum pernix (strain K1)
>gi|5104055|dbj|BAA79371.1| (AP000059) 1188aa long
hypothetical protein [Aeropyrum pernix]
Length = 1188
Score = 164 bits (412), Expect = 4e-39
Identities = 268/1158 (23%), Positives = 477/1158 (41%), Gaps = 193/1158 (16%)
Query: 12 QSLDEHSAPELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQILRTFEGKERQ---- 67
++L A +LGD++ G AP DP EFF RT+ TD M E++ + G + +
Sbjct: 14 KNLRYEPAVDLGDLVKGNAPIFIQDPAEFFSRTHLTDSMKELVIKAFMNLLGLKAETIGG 73
Query: 68 -------NVFLIYSLFGGGKTHTILTIYHAFRDPGALLDEEV----LRDYDPEKREKIKE 116
N+ L+ S GGGKTH+++ +YH F+ D+E LR D + + +
Sbjct: 74 KRYTVSSNLILLPSDLGGGKTHSLILLYHVFKLVRDSHDKESVISKLRILDNDIADFVDG 133
Query: 117 IGERISSLS-DVIVVPVYGKGELPRPRKPRD--GK--KTIWGYIADLLGEYEKVRVEDET 171
+ I ++S +++V+ P P +P + G+ KT+WGY+ LG Y+ V++ DE
Sbjct: 134 NWDLIKNMSLNLVVIDCKYSDLAPSPVRPIEIGGRRVKTLWGYLGYELGRYDIVKISDER 193
Query: 172 LTSPTPELIREIIGRRKVLFLIDEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLG 231
T+P + + +++ + L LIDEI Y D + +S FL +LA AL
Sbjct: 194 ETAPYADDVSKLLNGSRALVLIDEIGRYYD--------QSGLEPTKISAFLMNLAEALSK 245
Query: 232 ---SQSVMVMTIPMEEEGEVLKGEKEYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENEL 288
S+ +V++IP E G + + + E+ RA+ V +K G+ +L
Sbjct: 246 YNVSEVAVVISIPYEVRGGGAEAKAGMEYVHRPELIRAINEVLSRPSVEIIKPVGR-RDL 304
Query: 289 VEILKRRIFKGIDEEEKAKVLSELREAYSN-------KNVFGENVKFEEIRKSYPFHPEY 341
EIL++RIF E K K +EL N + + + + E ++YPFHP +
Sbjct: 305 AEILRKRIFAHKKNELK-KFFNELVSREFNREYPAQVRRILDDRSFWREAEETYPFHPMF 363
Query: 342 VEVLRTIIERVG-LQRTRDLIRI---TRIVMRELL--KRGESPALIMPHHIPLNDDKIKG 395
+ VL + R+ LQRTRD I+I T + ++E L + LIMPHHIPL ++
Sbjct: 364 LNVLEKLAYRLPYLQRTRDAIKIAVQTVLALKEGLFDALEDEINLIMPHHIPLFVSEVLD 423
Query: 396 SLFSKST--IYSDYWTVYETDI----NDEKLKEFRNPELARIILTYIFLRTYPYDS---- 445
++ Y ++ + +++ N LK+ E +++ L++ D
Sbjct: 424 ETILRNAPDEYRVFYLILRSNVVVPENLGNLKKLSKEEFYERVMSRA-LKSLKEDEAKLG 482
Query: 446 -----------------PMSLSEFPTPERIARGVYEPELFKSKNWLPVDIKDAVEEIRGS 488
PM++ EFPT + V E D K + +R
Sbjct: 483 LKLASNIWLHSLVGLGLPMNMGEFPTTADLIYSVSPTE---------QDAKGVLGILRSV 533
Query: 489 VKFMYLN---KRDPYLWFWRVANVSQMVNSKVEELLDTRRGEVISELVKKVHRFVKERKS 545
+ + ++ + D WF+ + VEEL++ + V E+ K + E
Sbjct: 534 LPQLIVHGDPESDSAKWFFTII-------PSVEELIEILKKNVTDEMAKNKLAELLE-SG 585
Query: 546 LVSSRA-----KIEDHVTFFKANNVIVTRET--QEFQDTPEYKLMVLVRDDVDEDMLRKI 598
L+ R K + F V+ T +E D+ + L+V D + +D L K+
Sbjct: 586 LIGRRGRGRPPKGYKEESVFAGYAVVKNAATIPKEILDSRDPALIVFA-DKISKDELFKV 644
Query: 599 IFMYGSGTRTYKNSIVVVYVASGGMEEMAK----------------------SMATIMAC 636
+ +N+IVV+ GM E K S+ I+
Sbjct: 645 L--------KGRNNIVVLAPHVEGMGEEEKLAPEDIAGIRELAGLRGKTVWDSLLEILKY 696
Query: 637 DEVKKNIREKFKK--YGEDVVRIQMSMVEDIRRKALEDLES-----------------QI 677
++IRE+ + GE VV+ ++++ +ES +
Sbjct: 697 YVATESIREENLRAFLGEKVVKGDEEYLKELLNLLKTKVESKKDYYYIHSWNMINRCYRK 756
Query: 678 VHYFRMVAYPDKDGPKVVQAQASSKSVIENVYSALVSQGKIVDDFDFEWLVDKFEDVNVK 737
V+Y+R+ ++G + S K ++ V L + I +F E ++ +D K
Sbjct: 757 VYYYRLGQIRFEEGLSL----ESDKPILPLVEEFLREKELIPYEFKGENIISIVKDYLGK 812
Query: 738 VLRPEGYPVSELIYMIMSNPR--LPMVSTERLYEAIKDAVIELEIGIERDGVIYFKKVYK 795
+ E V EL I+S + +P++ A++D V L+ I G + +K ++K
Sbjct: 813 NPKEEPIKVGELWNFILSTDKANVPIIRYRDFIGAVEDLVKSLDYAIRVKGKLLWKPIFK 872
Query: 796 ELPKEE----EKGNP------PATVRLK---------------DVILPRE-EALNRQVLE 829
KEE ++GN R+K D L RE E++ +
Sbjct: 873 S--KEEADALDEGNKLLEKVREHLTRIKASWDDVELVYWEKVFDEWLIRETESIPSDKII 930
Query: 830 LLKRESEEVVRKGNVDYSVR---RWYEVYLPNSSSLIPLRSVVRDGKVKDEYFEGVLWGY 886
+K S +V ++ + V+ + +++ L+ L + D ++D+ +E V
Sbjct: 931 KVKDRSGQVFDIRDIKFDVKNVIKSGKLFYEEKKYLVELNYELPDDILEDKEYE-VAGEV 989
Query: 887 IVERKEETPIVR--GEFQLEVSDHIIKGRPGDVITLEVKVKPLGREPFTVELETNFGELG 944
IV+ E +V+ + L V KG+ I +K G VE+ N L
Sbjct: 990 IVKNYENEFLVKLQPDEGLSVEPSEFKGKSPLPIKFRLKAGRAGNYRIKVEVYGNGSILD 1049
Query: 945 SQEVKLEGEEKKVTWTIIVPEEREIARIEGRSESRRREVEVTIIPILEEEIVEVGEVKE- 1003
S+ + + + + + I + EE E + + S R V + I V G+++
Sbjct: 1050 SRIISVSVKGEWIEEEITIGEEGEAVEEDAKLVSIRVNDVVGLPSITRVAKVYPGKIRGS 1109
Query: 1004 -EHKGNVLLEILDVDSTE 1020
G + +VD+T+
Sbjct: 1110 LSVSGKAVSVSFNVDTTD 1127
>gi|11499919 A. fulgidus predicted coding region AF2338 [Archaeoglobus fulgidus]
>gi|7483805|pir||B69542 hypothetical protein AF2338 -
Archaeoglobus fulgidus >gi|2648188|gb|AAB88926.1|
(AE000943) A. fulgidus predicted coding region AF2338
[Archaeoglobus fulgidus]
Length = 336
Score = 106 bits (261), Expect = 2e-21
Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 49/290 (16%)
Query: 21 ELGDVITGRAPRIYTDPREFFKRTYFTDPMLEILDQIL-RTFEGKERQNVFLIYSLFGGG 79
E + ++G A Y DP F+K+T+FT+ IL ++L R + ++ + FGGG
Sbjct: 43 EFSNFLSGNAHPDYLDPARFYKKTHFTEDAKNILKRVLSRVTYDSDESYAIILDTTFGGG 102
Query: 80 KTHTILTIYHAFRDPGALLDEEVLRDYDPEKREKIKEIGERISSLSDVIVVPVYGKGELP 139
KTHT++ IYH F++ ++ E ++ +K++G I ++ DV +V + G
Sbjct: 103 KTHTLIGIYHLFKNRDVAINFH-------EIKQILKDLG--IPAIPDVEIVAIDGHN--- 150
Query: 140 RPRKPRDGKKTIWGYIADLLGEYEKVRVEDETLTS----PTPELIREIIGR--RKVLFLI 193
D + +W I LG DETL S PT + I I + + V+FLI
Sbjct: 151 -----IDPDENLWNVIGRQLG--------DETLASRKSPPTAQEIENAIRKVGKPVVFLI 197
Query: 194 DEIVDYIDNIRKSTDEEERNYSRNVSKFLDHLATALLGSQSVMVMTIPMEEEGEVLKGEK 253
DE+V YI I S +N S F+ AT S++++TIP E E K E
Sbjct: 198 DELVIYISKILDSEARIAQNKGFIHSLFVATEAT----KTSIVILTIP---ESEAYKKES 250
Query: 254 EYDRDVIIEVRRAVTRVGGARMYSPVKIGGKENELVEILKRRIFKGIDEE 303
E RD+ R T++ +PV + +++ ILK+R K +DE+
Sbjct: 251 EILRDITAIAERGATKI------APV----AKEDIIRILKKRFVKEVDEK 290
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.139 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 413595169
Number of Sequences: 2977
Number of extensions: 18615925
Number of successful extensions: 54027
Number of sequences better than 1.0e-10: 5
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 53991
Number of HSP's gapped (non-prelim): 7
length of query: 1109
length of database: 189,106,746
effective HSP length: 61
effective length of query: 1048
effective length of database: 152,599,039
effective search space: 159923792872
effective search space used: 159923792872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 170 (70.6 bits)