BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0630 (appF-2) DE:OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN
APPF
         (322 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||C75142 oligopeptide transport ATP-binding protein appf PAB0...   651  0.0
pir||F75068 dipeptide abc transporter, ATP-binding protein (dppd...   640  0.0
pir||D71163 probable oligopeptide transport ATP-binding protein ...   570  e-162
pir||B72282 oligopeptide ABC transporter, ATP-binding protein - ...   379  e-104
pir||G71211 probable oligopeptide transport ATP-binding protein ...   298  8e-80
pir||G75026 oligopeptide transport ATP-binding protein appd. PAB...   293  3e-78
pir||F72428 oligopeptide ABC transporter, ATP-binding protein - ...   291  6e-78
gb|AAC24218.1| (AF055482) ABC transporter [Thermotoga neapolitana]    276  3e-73
pir||F75202 dipeptide abc transporter, dipeptide-binding protein...   261  6e-69
pir||D72393 oligopeptide ABC transporter, ATP-binding protein - ...   261  1e-68
pir||G72283 oligopeptide ABC transporter, ATP-binding protein - ...   257  9e-68
gb|AAK41513.1| Oligo/dipeptide transport, ATP binding protein (d...   254  1e-66
gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sul...   254  1e-66
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ...   253  2e-66
pir||E72536 probable oligopeptide transport ATP-binding protein ...   253  2e-66
gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD...   250  2e-65
pir||E82301 peptide ABC transporter, ATP-binding protein VC0617 ...   249  3e-65
pir||E71130 probable oligopeptide transport ATP-binding protein ...   245  4e-64
pir||B72421 oligopeptide ABC transporter, ATP-binding protein - ...   244  1e-63
sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   238  9e-62
pir||C72300 oligopeptide ABC transporter, ATP-binding protein - ...   236  3e-61
emb|CAC11415.1| (AL445063) sporulation protein (spo0KD) related ...   235  4e-61
pir||A72452 probable peptide transport ATP-binding protein APE22...   235  4e-61
pir||A72371 oligopeptide ABC transporter, ATP-binding protein - ...   235  8e-61
gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus ...   232  5e-60
gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis]     230  2e-59
pir||C72289 oligopeptide ABC transporter, ATP-binding protein - ...   228  6e-59
pir||F71014 probable dipeptide transport ATP-binding protein dpp...   228  7e-59
pir||D72371 oligopeptide ABC transporter, ATP-binding protein - ...   227  2e-58
dbj|BAB04069.1| (AP001508) oligopeptide ABC transporter (ATP-bin...   226  4e-58
gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus ...   225  5e-58
sp|Q53193|Y4TR_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN...   224  1e-57
pir||T34759 oligopeptide ABC transporter ATP-binding protein - S...   224  1e-57
gb|AAA62691.1| (M57689) sporulation protein [Bacillus subtilis]       223  2e-57
pir||D38447 sporulation initiation protein spo0KD - Bacillus sub...   223  2e-57
sp|P24136|OPPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   223  2e-57
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ...   223  2e-57
gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocy...   223  2e-57
pir||H75117 peptide abc transporter ATP-binding protein PAB1874 ...   222  4e-57
pir||D72289 oligopeptide ABC transporter, ATP-binding protein - ...   222  6e-57
pir||G71014 probable dipeptide transport ATP-binding protein dpp...   222  6e-57
pir||C72424 oligopeptide ABC transporter, ATP-binding protein - ...   221  7e-57
pir||H75380 peptide ABC transporter, ATP-binding protein - Deino...   220  1e-56
sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   220  2e-56
dbj|BAA14778.1| (D90763) Oligopeptide transport ATP-binding prot...   220  2e-56
sp|P76027|OPPD_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   220  2e-56
pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf...   220  2e-56
sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   219  3e-56
emb|CAC05750.1| (AL391751) putative peptide transport system ATP...   219  3e-56
gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dp...   219  4e-56
emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport s...   219  5e-56
dbj|BAB03747.1| (AP001507) oligopeptide ABC transporter (ATP-bin...   218  6e-56
dbj|BAB03746.1| (AP001507) oligopeptide ABC transporter (ATP-bin...   218  6e-56
gb|AAK41519.1| Oligo/dipeptide transport, ATP binding protein . ...   217  1e-55
dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   217  1e-55
gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [H...   215  7e-55
pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC...   214  9e-55
sp|P04285|OPPD_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   213  2e-54
pir||A72216 oligopeptide ABC transporter, ATP-binding protein - ...   213  3e-54
pir||G75380 peptide ABC transporter, ATP-binding protein - Deino...   210  1e-53
dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [O...   210  1e-53
dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   210  1e-53
emb|CAC11410.1| (AL445063) probable sporulation protein (spo0KD)...   210  1e-53
gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dp...   210  2e-53
pir||G75202 dipeptide abc transporter, dipeptide-binding protein...   210  2e-53
pir||QREBOT oligopeptide transport protein oppD - Salmonella typ...   208  7e-53
pir||F71163 probable oligopeptide transport ATP-binding protein ...   208  9e-53
gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF...   207  1e-52
pir||F72617 probable dipeptide transport system ATP-binding prot...   207  1e-52
pir||B72300 oligopeptide ABC transporter, ATP-binding protein - ...   207  2e-52
pir||T45280 probable ABC transporter intracellular ATPase chain ...   206  2e-52
pir||E75068 dipeptide abc transporter, ATP-binding protein (dppf...   206  4e-52
gb|AAA50595.1| (U08186) ATP-dependent oligopeptide transport pro...   205  8e-52
pir||D75142 oligopeptide transport ATP-binding protein appf PAB0...   204  1e-51
dbj|BAA94702.1| (AB026907) dipeptide transporter DppD homolog [O...   204  1e-51
pir||F75026 oligopeptide transport ATP-binding protein appf. PAB...   203  2e-51
pir||T35982 probable peptide transport ATP-binding protein - Str...   203  3e-51
gb|AAG20461.1| (AE005118) oligopeptide ABC transporter ATP-bindi...   202  4e-51
gb|AAC64255.1| (AF042861) putative OppD [Treponema denticola]         202  5e-51
dbj|BAB07359.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   202  5e-51
sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN...   201  9e-51
sp|P08007|OPPF_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   200  2e-50
pir||F71211 probable oligopeptide transport ATP-binding protein ...   200  2e-50
emb|CAC11411.1| (AL445063) oligopeptide transport ATP-binding pr...   200  2e-50
sp|P45095|DPPD_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   200  2e-50
sp|P77737|OPPF_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   198  1e-49
pir||D72720 probable oligopeptide transport ATP-binding protein ...   196  2e-49
pir||F83082 probable ATP-binding component of ABC dipeptide tran...   195  5e-49
sp|P45094|DPPF_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   195  7e-49
pir||T34760 oligopeptide ABC transporter ATP-binding protein - S...   195  7e-49
pir||F82242 oligopeptide ABC transporter, ATP-binding protein VC...   195  7e-49
sp|P37314|DPPD_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   194  1e-48
sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   193  2e-48
pir||A72618 probable oligopeptide transport ATP-binding protein ...   192  5e-48
gb|AAA23706.1| (L08399) peripheral membrane protein [Escherichia...   191  8e-48
sp|P37313|DPPF_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   191  8e-48
pir||C72536 probable oligopeptide transport ATP-binding protein ...   189  3e-47
emb|CAC05751.1| (AL391751) putative peptide transport system ATP...   189  3e-47
pir||E83082 probable ATP-binding component of ABC transporter PA...   188  7e-47
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA...   188  9e-47
pir||F71130 probable oligopeptide transport ATP-binding protein ...   187  2e-46
dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-bin...   187  2e-46
sp|P77268|YDDP_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...   186  3e-46
sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...   185  8e-46
gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (d...   183  2e-45
pir||JC5009 nucleotide-binding protein D - Methanosarcina mazei ...   182  4e-45
gb|AAG20448.1| (AE005117) oligopeptide ABC transporter ATP-bindi...   182  4e-45
pir||C72452 probable peptide transport ATP-binding protein APE22...   182  5e-45
gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola]         182  7e-45
emb|CAA61525.1| (X89237) oligopeptidepermease [Streptococcus pyo...   181  1e-44
pir||B69856 oligopeptide transport ATP-binding protein homolog y...   181  1e-44
dbj|BAA03322.1| (D14438) ATP-binding protein [Synechococcus elon...   178  8e-44
pir||T35983 probable peptide transport ATP-binding protein - Str...   178  8e-44
pir||H71951 dipeptide transport system dipeptide transport syste...   176  3e-43
pir||C72371 oligopeptide ABC transporter, ATP-binding protein - ...   176  3e-43
sp|P18765|AMIE_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   175  5e-43
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ...   175  7e-43
gi|10954710 hypothetical ABC-transporter gene~similar to moaD ge...   175  7e-43
pir||E64557 dipeptide transport ATP-binding protein dppD - Helic...   175  9e-43
pir||A72282 oligopeptide ABC transporter, ATP-binding protein - ...   175  9e-43
sp|P47325|OPPD_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   174  1e-42
sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   173  3e-42
sp|P36636|SAPD_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   171  1e-41
emb|CAA10912.1| (AJ222649) sapD [Erwinia chrysanthemi]                171  1e-41
pir||F71483 probable dipeptide transport - Chlamydia trachomatis...   171  1e-41
sp|P75552|OPPD_MYCPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   170  2e-41
sp|P36635|SAPD_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   169  4e-41
gb|AAD48155.1|AF086619_1 (AF086619) ABC transporter homolog [Loo...   169  4e-41
gi|10954941 Probable accB [Agrobacterium tumefaciens] >gi|649829...   169  5e-41
gb|AAF28110.1|AF153317_2 (AF153317) SapD [Shigella dysenteriae]       166  3e-40
pir||T03431 probable transport protein accB - Agrobacterium tume...   164  1e-39
pir||F72049 peptide ABC transporter, ATP-binding protein CP0065 ...   164  1e-39
pir||C81746 peptide ABC transporter, ATP-binding protein TC0062 ...   162  4e-39
pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 ...   161  8e-39
pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AA...   161  1e-38
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T...   160  2e-38
gi|10954942 Probable accC [Agrobacterium tumefaciens] >gi|649829...   158  1e-37
pir||F70141 probable oligopeptide transport ATP-binding protein ...   157  2e-37
pir||T03432 probable transport protein accC - Agrobacterium tume...   156  3e-37
emb|CAA68076.1| (X99740) oligopeptide transport ATP-binding prot...   156  4e-37
pir||D82301 peptide ABC transporter, ATP-binding protein VC0616 ...   155  6e-37
dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   154  1e-36
pir||H72366 oligopeptide ABC transporter, ATP-binding protein - ...   153  2e-36
sp|P45288|SAPD_HAEIN PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   153  3e-36
dbj|BAA97046.1| (AB015765) TrkE [Vibrio alginolyticus]                152  7e-36
dbj|BAB05796.1| (AP001514) oligopeptide ABC transporter (ATP-bin...   150  3e-35
gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus ...   149  5e-35
pir||E82170 peptide ABC transporter, ATP-binding protein VC1683 ...   148  8e-35
pir||F64557 dipeptide transport ATP-binding protein dppF - Helic...   145  5e-34
pir||A71952 dipeptide transport system ATP-binding protein - Hel...   145  5e-34
pir||A82876 oligopeptide transport system permease protein UU560...   144  2e-33
pir||T35941 probable ABC-type transport systsem ATP-binding prot...   140  2e-32
dbj|BAB05519.1| (AP001513) oligopeptide ABC transporter (ATP-bin...   131  1e-29
dbj|BAB04290.1| (AP001509) oligopeptide ABC transporter (ATP-bin...   116  3e-25
emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lac...   115  6e-25
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ...   112  5e-24
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th...   110  2e-23
pir||F82170 peptide ABC transporter, ATP-binding protein VC1684 ...   109  3e-23
pir||H82377 ABC transporter, ATP-binding protein VCA1101 [import...   104  1e-21
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot...   102  4e-21
dbj|BAA97047.1| (AB015765) compensate SapD [Vibrio alginolyticus]     102  4e-21
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ...   102  7e-21
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ...    99  8e-20
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN...    98  2e-19
pir||S77386 nitrate transport protein D-3 - Synechocystis sp. (s...    98  2e-19
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot...    97  2e-19
gb|AAK41516.1| Oligo/dipeptide transport, ATP binding protein . ...    96  4e-19
sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PR...    94  2e-18
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s...    94  3e-18
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB...    92  8e-18
pir||E72757 probable phosphate transport ATP-binding protein pst...    92  1e-17
pir||F71849 amino acid ABC transporter, ATP-binding protein - He...    91  1e-17
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp...    90  2e-17
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther...    89  5e-17
pir||D83356 probable ATP-binding component of ABC transporter PA...    89  7e-17
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop...    89  7e-17
gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens]               89  9e-17
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)...    89  9e-17
pir||C71197 probable ATP-binding transport protein - Pyrococcus ...    88  1e-16
gb|AAC69845.1| (AF076684) oligopeptide transporter putative ATPa...    88  1e-16
gb|AAC24216.1| (AF055482) ABC transporter [Thermotoga neapolitana]     88  2e-16
pir||C83353 probable ATP-binding component of ABC maltose/mannit...    88  2e-16
gb|AAD22041.1| (AF118229) ATP-binding cassette protein PstB [Str...    87  2e-16
sp|Q50734|YP64_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...    87  3e-16
pir||H72342 ABC transporter, ATP-binding protein - Thermotoga ma...    87  3e-16
pir||C69223 anion permease - Methanobacterium thermoautotrophicu...    87  4e-16
dbj|BAB03338.1| (AB035453) ABC transporter [Staphylococcus aureus]     86  5e-16
pir||T45265 cobalt transport ATP-binding protein O homolog [impo...    86  6e-16
pir||T47012 hypothetical protein [imported] - Yersinia pestis >g...    86  6e-16
pir||C82526 ABC transporter ATP-binding protein XF2695 [imported...    86  6e-16
pir||S75960 nitrate transport protein D-1 - Synechocystis sp. (s...    85  8e-16
gb|AAF99694.1|AF267498_4 (AF267498) ABC transporter OrfX [Strept...    85  1e-15
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma...    85  1e-15
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc...    85  1e-15
gb|AAF43494.1|AF130119_1 (AF130119) oligopeptide permease D [Myc...    85  1e-15
pir||A82974 probable ATP-binding component of ABC transporter PA...    85  1e-15
gi|11499941 ABC transporter, ATP-binding protein [Archaeoglobus ...    84  2e-15
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma...    84  2e-15
gb|AAG18646.1| (AE004970) amino acid ABC transporter, ATP-bindin...    84  2e-15
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S...    83  3e-15
pir||G69192 ABC transporter (glutamine transport ATP-binding pro...    83  3e-15
pir||B70849 hypothetical protein Rv0073 - Mycobacterium tubercul...    83  3e-15
pir||H71008 probable ATP-binding transport protein - Pyrococcus ...    83  3e-15
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st...    83  4e-15
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI...    83  5e-15
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)...    82  7e-15
emb|CAC05880.1| (AL391754) putative ABC transporter ATP-binding ...    82  7e-15
pir||G64435 cobalt transport ATP-binding protein O homolog - Met...    82  9e-15
pir||T35994 probable ABC-type transport system ATP-binding chain...    82  9e-15
pir||E83248 probable ATP-binding component of ABC transporter PA...    82  1e-14
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S...    81  2e-14
gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]      80  3e-14
pir||E69098 phosphate transport system ATP-binding - Methanobact...    80  5e-14
pir||H71241 probable multiple sugar-binding transport ATP-bindin...    79  8e-14
pir||S63613 probable ATP-binding protein cymD - Klebsiella oxyto...    78  1e-13
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]        78  1e-13
pir||A70338 ABC transporter - Aquifex aeolicus >gi|2983088|gb|AA...    78  2e-13
gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPa...    78  2e-13
dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system...    77  2e-13
pir||G69043 cobalt transport ATP-binding protein O - Methanobact...    77  3e-13
dbj|BAB07632.1| (AP001520) ABC transporter (ATP-binding protein)...    77  3e-13
gb|AAK42084.1| ABC transporter, ATP binding protein. [Sulfolobus...    76  4e-13
dbj|BAB06418.1| (AP001516) ABC transporter (ATP-binding protein)...    76  4e-13
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding...    76  5e-13
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [...    76  5e-13
gb|AAK42217.1| ABC transporter [Sulfolobus solfataricus]               76  5e-13
pir||G71192 probable cobalt transport ATP-binding protein - Pyro...    76  5e-13
pir||T43920 YfuC protein [imported] - Yersinia enterocolitica >g...    76  7e-13
sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK) >...    76  7e-13
gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter...    76  7e-13
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur...    75  9e-13
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe...    75  9e-13

>pir||C75142 oligopeptide transport ATP-binding protein appf PAB0630 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458363|emb|CAB49852.1| (AJ248285) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
           Length = 322
           
 Score =  651 bits (1660), Expect = 0.0
 Identities = 322/322 (100%), Positives = 322/322 (100%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM
Sbjct: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY
Sbjct: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA
Sbjct: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL
Sbjct: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV
Sbjct: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300

Query: 301 EPKLVKVGRDHYAACHLLGGES 322
           EPKLVKVGRDHYAACHLLGGES
Sbjct: 301 EPKLVKVGRDHYAACHLLGGES 322


>pir||F75068 dipeptide abc transporter, ATP-binding protein (dppd) PAB1346 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458956|emb|CAB50443.1| (AJ248287) dipeptide ABC
           transporter, ATP-binding protein (dppD) [Pyrococcus
           abyssi]
           Length = 322
           
 Score =  640 bits (1632), Expect = 0.0
 Identities = 316/322 (98%), Positives = 320/322 (99%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM
Sbjct: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY
Sbjct: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA
Sbjct: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL
Sbjct: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPP+GCRFYTRCPFAME C +V
Sbjct: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPRGCRFYTRCPFAMEHCPEV 300

Query: 301 EPKLVKVGRDHYAACHLLGGES 322
           EPKLVKVG++HYAACHLLGGES
Sbjct: 301 EPKLVKVGKEHYAACHLLGGES 322


>pir||D71163 probable oligopeptide transport ATP-binding protein AppF -
           Pyrococcus horikoshii >gi|3256910|dbj|BAA29593.1|
           (AP000002) 324aa long hypothetical oligopeptide
           transport ATP-binding protein AppF [Pyrococcus
           horikoshii]
           Length = 324
           
 Score =  570 bits (1453), Expect = e-162
 Identities = 277/322 (86%), Positives = 302/322 (93%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M LL VRNLR+YY TP G+V+AVDGVSFEV +GEVFG+AGESGCGKSTLVHSLILRKPPM
Sbjct: 1   MILLRVRNLRIYYSTPRGFVKAVDGVSFEVKKGEVFGIAGESGCGKSTLVHSLILRKPPM 60

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
            +KGG AIFKG+DLM L R+E RKIQY ELSIIPQYAMNALNPTK+IKDIVWDLAREHG 
Sbjct: 61  THKGGKAIFKGKDLMKLSREEARKIQYKELSIIPQYAMNALNPTKKIKDIVWDLAREHGM 120

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
            D++EVE+LL+ERLSMVKLSP+VA+MYPVELSGGMRQRATMVVSTLLNPDLLIADE+TSA
Sbjct: 121 QDKKEVEKLLKERLSMVKLSPKVAEMYPVELSGGMRQRATMVVSTLLNPDLLIADEVTSA 180

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVTTQRVVIELLHHFM+EGIVKSIIFVTHDLALLRQIADRVM+MYAGKVVEIG MEEVL
Sbjct: 181 LDVTTQRVVIELLHHFMEEGIVKSIIFVTHDLALLRQIADRVMIMYAGKVVEIGSMEEVL 240

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           E+PAHPYTQLLLNSLPRMGVHYKRERL GIPGYPISLLNPP+GCRFYTRCP+AM+ CR+V
Sbjct: 241 ESPAHPYTQLLLNSLPRMGVHYKRERLRGIPGYPISLLNPPEGCRFYTRCPYAMQVCREV 300

Query: 301 EPKLVKVGRDHYAACHLLGGES 322
           EP+LV+V   HYAACHLLGG S
Sbjct: 301 EPELVEVSPGHYAACHLLGGGS 322


>pir||B72282 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981773|gb|AAD36295.1|AE001778_16 (AE001778)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 326
           
 Score =  379 bits (964), Expect = e-104
 Identities = 179/307 (58%), Positives = 242/307 (78%), Gaps = 1/307 (0%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           +LDVR+LR+YYRT  GYV+AVDGVSF++  GE+ G+AGESGCGKSTL + LIL KPPM+Y
Sbjct: 8   VLDVRDLRIYYRTLYGYVKAVDGVSFDIKRGEILGIAGESGCGKSTLGNGLILLKPPMKY 67

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
            GG AI  G+++M+L   ELRK++Y ++SIIPQYAM+A+NPTK+IK I+ DL  EHG + 
Sbjct: 68  MGGEAILDGKNIMALSPKELRKVRYEKISIIPQYAMDAMNPTKKIKQIIDDLLHEHGESF 127

Query: 123 RREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALD 182
            R+ ++++ ERL +V L  +V +MYP+ELSGGM+QR  MV+STL+NPD+LIADEITSALD
Sbjct: 128 ERK-KDVIEERLEIVNLGKKVLNMYPIELSGGMKQRMVMVISTLMNPDVLIADEITSALD 186

Query: 183 VTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLEN 242
           V++QR VI++L+   ++ I+ S+ F+THDL++L QIAD+VMV+YAG+V EI PME++++ 
Sbjct: 187 VSSQRSVIQMLYEMREKEIMGSLAFITHDLSVLYQIADKVMVLYAGRVAEISPMEDIIQE 246

Query: 243 PAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEP 302
           P HPYT++LL+SLP++GV Y + +L GIPGYP SLLN   GCRF  RCP+A E C    P
Sbjct: 247 PLHPYTKMLLSSLPKIGVRYSQTKLKGIPGYPPSLLNIGPGCRFRDRCPYAFEKCEQDPP 306

Query: 303 KLVKVGR 309
                GR
Sbjct: 307 VFDVDGR 313


>pir||G71211 probable oligopeptide transport ATP-binding protein appD -
           Pyrococcus horikoshii >gi|3258403|dbj|BAA31086.1|
           (AP000007) 322aa long hypothetical oligopeptide
           transport ATP-binding protein appD [Pyrococcus
           horikoshii]
           Length = 322
           
 Score =  298 bits (754), Expect = 8e-80
 Identities = 153/318 (48%), Positives = 223/318 (70%), Gaps = 5/318 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +L+V+NL++YY T  G V+AVD V+F++ +GEV G+AGESGCGKS++  +L+ + +PP  
Sbjct: 8   ILEVKNLKMYYFTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTLMGMPQPPGR 67

Query: 62  YKGGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
             GGS    GR+++ LP D LR+ I++ ++S+I Q AMNALNP   +   + +    H  
Sbjct: 68  IVGGSIKIDGREIVGLPEDVLRREIRWQKISMIFQGAMNALNPVYTVGYQMIEPLIYHKG 127

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
            DR +  +   + L +V L P +   YP ELSGGM+QR  + ++ LL PD++IADE T+A
Sbjct: 128 MDREDALDRAMKYLELVGLDPEIVYRYPHELSGGMKQRVVIAMALLLEPDIVIADEPTTA 187

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV  Q  +I L+   +++ +  S+IF+THDL++L +I+DRV VMYAGK+VEIGP E++ 
Sbjct: 188 LDVVVQAQIINLMKR-LKKKLGLSMIFITHDLSILAEISDRVAVMYAGKLVEIGPSEKIY 246

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
             PAHPYTQ LL ++PR+  H   E+L  IPG P +L+NPP GCRF+ RCP+AM+ C++ 
Sbjct: 247 YEPAHPYTQKLLAAIPRL--HEDVEKLEFIPGSPPNLINPPSGCRFHPRCPYAMDKCKEE 304

Query: 301 EPKLVKVGRDHYAACHLL 318
           EPK+V+V +DHYAAC LL
Sbjct: 305 EPKMVEVDKDHYAACWLL 322


>pir||G75026 oligopeptide transport ATP-binding protein appd. PAB1196 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5459167|emb|CAB50653.1| (AJ248288) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPD. [Pyrococcus abyssi]
           Length = 319
           
 Score =  293 bits (741), Expect = 3e-78
 Identities = 150/318 (47%), Positives = 220/318 (69%), Gaps = 5/318 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +L+V+NL++YY T  G V+AVD V+F++ +GEV G+AGESGCGKS++  +L+ + +PP  
Sbjct: 5   ILEVKNLKMYYFTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTLMGMPQPPGR 64

Query: 62  YKGGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
              GS    GR+++ LP D LRK I++ ++S+I Q AMNALNP   +   + +    H  
Sbjct: 65  IVSGSIKIDGREIVGLPEDVLRKEIRWQKISMIFQGAMNALNPVYTVGYQMIEPLIYHRG 124

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             R +  +   + L +V L P +   YP ELSGGM+QR  +  + +L PD++IADE T+A
Sbjct: 125 MSREDALDRAMKYLELVGLDPEIVYRYPHELSGGMKQRVVIATALILEPDIVIADEPTTA 184

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV  Q  +I L+   +++ +  S+IF+THDL++L +I+D++ +MYAGK+VEIGP E+V 
Sbjct: 185 LDVVVQAQIINLMKR-LKKKLGLSMIFITHDLSILAEISDKIAIMYAGKIVEIGPSEKVY 243

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
             PAHPYTQ LL ++PR+  H   E+L  IPG P +LLNPP GCRF+ RCP+AM+ C++ 
Sbjct: 244 YEPAHPYTQKLLAAIPRL--HEDVEKLEFIPGSPPNLLNPPSGCRFHPRCPYAMDRCKEE 301

Query: 301 EPKLVKVGRDHYAACHLL 318
           EPK+V+V +DHYAAC LL
Sbjct: 302 EPKMVEVDKDHYAACWLL 319


>pir||F72428 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980512|gb|AAD35122.1|AE001690_16 (AE001690)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 330
           
 Score =  291 bits (738), Expect = 6e-78
 Identities = 156/321 (48%), Positives = 208/321 (64%), Gaps = 7/321 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRK-PPME 61
           LL   N+R YY+     V+AVDG+SFE+ E EV GV GESGCGK+TL + + +    P+ 
Sbjct: 5   LLKAENVRAYYKLEKVSVKAVDGLSFEILEDEVIGVVGESGCGKTTLSNVIFMNMVKPLT 64

Query: 62  YKGGSAIFKGR----DLMSLPRDEL-RKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
              G    +      +L S+ RDE+ RK    E++IIPQ AMNAL PT R++  V  LA 
Sbjct: 65  LVDGKIFLRVNGEFVELSSMTRDEVKRKFWGKEITIIPQAAMNALMPTIRMEKYVRHLAE 124

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            HG  D  E+ +  R R   V L P     YP ELSGGMRQRA + ++T+LNP LLIADE
Sbjct: 125 SHGI-DEEELLDKARRRFEEVGLDPLWIKRYPFELSGGMRQRAVIAIATILNPSLLIADE 183

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            TSALDV  Q+V++++L    ++GIVKSIIF+THD+A +RQIADR+++MYAGK+VE  P+
Sbjct: 184 PTSALDVVNQKVLLKVLMQMKRQGIVKSIIFITHDIATVRQIADRMIIMYAGKIVEFAPV 243

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           E +LE P HPYTQ L NS+       K+  ++ IPG P +L+NPP GCRF+ RCP AM+ 
Sbjct: 244 ESLLEKPLHPYTQGLFNSVLTPEPEVKKRGITTIPGAPPNLINPPSGCRFHPRCPHAMDV 303

Query: 297 CRDVEPKLVKVGRDHYAACHL 317
           C++ EP L ++      AC L
Sbjct: 304 CKEKEPPLTEIEPGRRVACWL 324


>gb|AAC24218.1| (AF055482) ABC transporter [Thermotoga neapolitana]
           Length = 326
           
 Score =  276 bits (698), Expect = 3e-73
 Identities = 145/331 (43%), Positives = 212/331 (63%), Gaps = 21/331 (6%)

Query: 3   LLDVRNLRVYY--------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           L++ +NL+ YY        RT    +RAVD VS ++  GE++G+AGESGCGKSTL+ +L+
Sbjct: 4   LVEGKNLKAYYVLEFWGKKRT----IRAVDNVSLKIFSGEIYGIAGESGCGKSTLLKTLL 59

Query: 55  LR-KPPMEYKGGSAIF----KGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD 109
              +PP+   GG   +    K  +++SL  +E R++++  +S IPQ +M+ LNP KRI+D
Sbjct: 60  ANLEPPLRLFGGELNYWLDSKPVNVVSLKEEERRRLKWRFISYIPQGSMHVLNPVKRIRD 119

Query: 110 IVWDLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNP 169
              ++ + H    +    E+  E L  + L  RV DM+P +LSGGMRQR T+ ++TLL P
Sbjct: 120 TFMEILKSHVRRQKETFLEMAIEHLKALGLPSRVLDMFPHQLSGGMRQRVTIALATLLKP 179

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            +++ADE T+ALDV  QR VI+L+    +E +  +I+ VTHD+ +  Q+  R+ +MYAGK
Sbjct: 180 RIILADEPTTALDVVAQRAVIQLIKKIQKE-LKNTIVLVTHDMGIHAQVTTRMAIMYAGK 238

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTR 289
           +VE GP  E+ + P HPYT+ L+ SLPR+G    RE   GIPG P SL++PP GCRF+ R
Sbjct: 239 IVEEGPTLEIFKEPLHPYTRYLIQSLPRVGDKQLRE---GIPGSPPSLVSPPSGCRFHPR 295

Query: 290 CPFAMEDCRDVEPKLVKVGRDHYAACHLLGG 320
           CP A + C + EP  ++V   H AAC LLGG
Sbjct: 296 CPHATQRCEEEEPVFLEVNPGHRAACFLLGG 326


>pir||F75202 dipeptide abc transporter, dipeptide-binding protein PAB0094 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5457578|emb|CAB49069.1| (AJ248283) dipeptide ABC
           transporter, dipeptide-binding protein [Pyrococcus
           abyssi]
           Length = 323
           
 Score =  261 bits (661), Expect = 6e-69
 Identities = 138/320 (43%), Positives = 202/320 (63%), Gaps = 5/320 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           L+ + NL + + T  G V+A+DGVSF++ +GE+  + GE+GCGKS    +++   P    
Sbjct: 6   LVKIENLYIDFITDRGVVKAIDGVSFDIRKGEILALIGETGCGKSVTAKAIMRLLPRNAI 65

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
             G  I+KGR+L+ LP  E+RKI+  E+++I Q  + +LNP   I+D + ++ + H    
Sbjct: 66  VKGKIIYKGRNLLELPEREMRKIRGKEIAMIFQDPLTSLNPVFTIEDQMGEMFKVHKLPV 125

Query: 123 RREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
              + + + + L MVK+    +    YP ELSGGMRQR  + +     P LLIADE T+A
Sbjct: 126 VGSILDEIVKLLKMVKIPDPEKRVKSYPFELSGGMRQRVMIAMMLSAKPSLLIADEPTTA 185

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVT Q  ++ L+   ++E    SI+ +TH+  ++ ++ADRV+VMYAG+VVEI P+EE+ 
Sbjct: 186 LDVTIQAQIMNLMLE-LREKFETSILLITHNPGVVAEMADRVVVMYAGQVVEIAPVEEIF 244

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           +NP HPYTQ LL +LPR   H     L  IPG   +LLNPPKGCRF+ RC  A E C   
Sbjct: 245 DNPLHPYTQGLLRALPR--GHKTERELENIPGRVPNLLNPPKGCRFHPRCKKAKEMCSKE 302

Query: 301 EPKLVKVGRDHYAACHLLGG 320
           +PKL++V ++HY ACHL GG
Sbjct: 303 KPKLIEVEKEHYVACHLYGG 322


>pir||D72393 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980803|gb|AAD35391.1|AE001712_4 (AE001712)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 328
           
 Score =  261 bits (659), Expect = 1e-68
 Identities = 142/323 (43%), Positives = 198/323 (60%), Gaps = 13/323 (4%)

Query: 8   NLRVYYRTPVG----YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR-KPPMEY 62
           NLR YY    G     +RAVD VS    E EV+G+AGESGCGKSTL+  L    KPP++ 
Sbjct: 9   NLRAYYFIKSGDKTTSIRAVDNVSLHFFENEVYGIAGESGCGKSTLLKVLFGEIKPPLKL 68

Query: 63  KGGSAIFK--GRD--LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH 118
             G  +FK  G +  + S+  D+L+KI++  +S +PQ +M+ LNP ++I+ I  D+  EH
Sbjct: 69  VDGEVVFKLDGEEYRINSMSLDQLKKIRWKYVSYVPQGSMSVLNPVRKIRRIFLDVIEEH 128

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
               R E    +      + L  RV D YP +LSGGMRQR T+ ++T+LNP ++ ADE T
Sbjct: 129 TSMSREEAFSRIESYFEALGLPVRVLDSYPHQLSGGMRQRVTIALATVLNPKVIFADEPT 188

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDV  QR VI+LL    +E    +++ VTHD+ +   +A R+ VMYAG+++E     E
Sbjct: 189 TALDVVVQRGVIQLLKKIHKEQ-KNTLVIVTHDMGVHAHLATRIGVMYAGRLIEEAETHE 247

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           + +NP HPYT+ L+NSLPR G    R R  G PG P SL N P GC F+ RCP A + C 
Sbjct: 248 IFKNPLHPYTRFLINSLPRFG---DRSRKEGTPGSPPSLANLPSGCPFHPRCPIADQICM 304

Query: 299 DVEPKLVKVGRDHYAACHLLGGE 321
           ++EP L++V R+H  AC  +G E
Sbjct: 305 EMEPDLIEVARNHKVACWKVGVE 327


>pir||G72283 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981745|gb|AAD36269.1|AE001776_5 (AE001776)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 326
           
 Score =  257 bits (651), Expect = 9e-68
 Identities = 136/327 (41%), Positives = 208/327 (63%), Gaps = 13/327 (3%)

Query: 3   LLDVRNLRVYYRTPVG----YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRK 57
           L+  +NL+ YY   +      V+AVD VS ++   E++G+AGESGCGKSTL+ +L+ L  
Sbjct: 4   LISGKNLKAYYVLDLWGSKKVVKAVDNVSLDILPNEIYGIAGESGCGKSTLLKALLALLD 63

Query: 58  PPMEYKGGSAIF--KGR--DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
           PP+    G  ++  +GR  ++  L  + +RK+++S +S IPQ +M+ LNP KR++D   +
Sbjct: 64  PPLRLMDGELLYNIEGRPTNVTLLKSETIRKLRWSFISYIPQGSMHVLNPVKRVRDTFIE 123

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
           +   H     +E  +L  + L  + L  RV +M+P +LSGGMRQR T+ ++T+L P ++ 
Sbjct: 124 ILSSHVKKQTKEFLDLAVQHLKDLGLPERVLNMFPHQLSGGMRQRVTIALATVLKPRVIF 183

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE T+ALDV  QR V++L+   +Q  +  +++ VTHD+ +  QI  R+ +MYAGK+VE 
Sbjct: 184 ADEPTTALDVVAQRAVMQLIRK-IQNDLKNTVVLVTHDMGVHAQITTRMAIMYAGKIVEE 242

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFA 293
           GP  E+ +NP HPYT+ L+ SLP +G    ++  SGIPG P SL+ PP GCRF+ RCP A
Sbjct: 243 GPTLEIFKNPLHPYTRYLIQSLPAIG---DKKLRSGIPGSPPSLVAPPPGCRFHPRCPHA 299

Query: 294 MEDCRDVEPKLVKVGRDHYAACHLLGG 320
            + CR+ EP L ++   H  AC L+ G
Sbjct: 300 SQRCREEEPLLKEIKPGHKVACFLMEG 326


>gb|AAK41513.1| Oligo/dipeptide transport, ATP binding protein (dppD-1) [Sulfolobus
           solfataricus]
           Length = 316
           
 Score =  254 bits (641), Expect = 1e-66
 Identities = 135/317 (42%), Positives = 204/317 (63%), Gaps = 9/317 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKP-PME 61
           LL+VRNL+VY+ T  G V+AVDGV+  + +GE+ G+AGESG GKST+ ++++   P P +
Sbjct: 6   LLEVRNLKVYFYTKRGIVKAVDGVNLYLDKGEIVGLAGESGSGKSTIGYAIMRLVPFPGK 65

Query: 62  YKGGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
            + G  +FKG +++ L  +  RK  ++ +++++ Q +M+   P  +IKD + ++ R HG+
Sbjct: 66  IESGEILFKGENILKLDEEAFRKNYRWKKIAMVFQGSMSGFTPVFKIKDQIIEVLRIHGW 125

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
               + EE ++E   MV + P++A+ YP ELSGG +QRA + ++  LNP++LIADE T+A
Sbjct: 126 --NGDYEERIKELFKMVNMDPQLAEKYPHELSGGQKQRAFIAMALALNPEVLIADEPTTA 183

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV  Q  ++ LL    +E +  SIIF+THDLALL +I+DR   +YAGKV+E GP E + 
Sbjct: 184 LDVMVQEHILNLLKKLRKE-LNLSIIFITHDLALLSEISDRDYTLYAGKVMESGPSEVIF 242

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           + P HPYT LL+ S+  +     ++ + GIPG    L +PP GCRF TRCPFA + C   
Sbjct: 243 KKPRHPYTSLLIESIATL----DKDIIKGIPGAMPDLSSPPLGCRFNTRCPFARDICFKE 298

Query: 301 EPKLVKVGRDHYAACHL 317
           EPK+         AC L
Sbjct: 299 EPKMKTFSDGDEVACWL 315


>gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sulfolobus
           solfataricus]
           Length = 617
           
 Score =  254 bits (641), Expect = 1e-66
 Identities = 139/321 (43%), Positives = 198/321 (61%), Gaps = 6/321 (1%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPM 60
           +LL V  L   Y    G+V  V  V+FEV   E+F +AGESGCGKSTL  ++  L K P 
Sbjct: 7   SLLKVNELTAGYFNQDGFVIGVTNVNFEVYPNEIFAIAGESGCGKSTLAMAIYGLLKYPG 66

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G    K +D++S+ ++ELRK++  E   +PQ+AM+AL+P  +I D +   A  HG 
Sbjct: 67  VVLRGHVYLKDKDILSITQEELRKLRMKEFVYVPQFAMDALDPVAKIGDQMMRAAVSHG- 125

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
            +  E  +L++E+L +V L   V +MYP ELSGGMRQR  +  S LLNP L+I DE T+ 
Sbjct: 126 VNVEEARKLIKEKLELVDLPYNVVNMYPHELSGGMRQRVVIATSILLNPSLIILDEPTTG 185

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV  Q  +++ L   +Q  +  S++ ++HD+++L  I+DRV +MYAG++VEIG  EE++
Sbjct: 186 LDVIVQYEILKDLKR-IQRQLGVSLVIISHDISMLLMISDRVGIMYAGEIVEIGSKEEII 244

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGY-PISLLNPPKGCRFYTRCPFAMEDCRD 299
           + P+HPYT LL++SLP   +  +RE+L  IPG  P+ L   P  CRFY RCPF ME C  
Sbjct: 245 KRPSHPYTYLLISSLP--SLVKRREKLLSIPGNPPLMLSKVPNSCRFYDRCPFKMEKCST 302

Query: 300 VEPKLVKVGRDHYAACHLLGG 320
           + P L  +   H A C L  G
Sbjct: 303 LNPALGDIMDGHKARCFLQKG 323


 Score =  122 bits (302), Expect = 8e-27
 Identities = 80/244 (32%), Positives = 133/244 (53%), Gaps = 17/244 (6%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLPR 79
           + AV+ VSFE+ +G +  + G SG GKST+   L      ++   G  I  G+D+     
Sbjct: 378 INAVNDVSFELKKGTITALVGGSGHGKSTIAKILA---GMIQQTSGKIILLGKDVSEY-- 432

Query: 80  DELRKIQYSE-LSIIPQYAMNALNPTKRIKDIVWDLAR----EHGYADRREVEELLRERL 134
                + Y E + +I Q   ++L+P   ++   W + R        +++ ++   + E L
Sbjct: 433 GVRNSMWYKENVQMIFQDPYSSLDPRHTVR---WHVERPLLIHKKVSNKDQLLPKIIEVL 489

Query: 135 SMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIEL 192
             V L P  +    YP ELSGG RQR  +  +T + P +L+ADE  S LD + +  ++ L
Sbjct: 490 KNVGLKPPEKYLYKYPHELSGGERQRVAIARATAVEPKVLVADEPVSMLDASLRAGILNL 549

Query: 193 LHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLL 252
           +  F + GI  SI+++THD+A +  IAD +MV+Y G++VE G   EV+ NP+H YT+ L+
Sbjct: 550 IKKFKKNGI--SILYITHDIATVNYIADEIMVIYKGRIVEKGNTYEVISNPSHEYTKRLI 607

Query: 253 NSLP 256
            ++P
Sbjct: 608 EAVP 611


>pir||H72215 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4982327|gb|AAD36814.1|AE001813_6 (AE001813)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 324
           
 Score =  253 bits (640), Expect = 2e-66
 Identities = 145/328 (44%), Positives = 203/328 (61%), Gaps = 12/328 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LL+V NL+V +    G V+AVDG+S+++ +GE  G+ GESG GKS  V SL+ L    
Sbjct: 2   MELLNVNNLKVEFHRVEGIVKAVDGISYKLNKGESLGIVGESGSGKSVSVLSLLRLINRN 61

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-----KDIVWDL 114
                G AIF G+DL+ L ++ELR I+  ++SII Q  M +LNP  R+     + I+W  
Sbjct: 62  GRIVDGEAIFLGKDLLKLNKEELRNIRGKDISIIFQNPMTSLNPIIRVGIQVMEPIIWHR 121

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
             ++  A  R +E  L ER+ + + SP+    YP + SGGMRQR  + ++   +P LLIA
Sbjct: 122 LMKNEEARERAIE--LLERVGIPE-SPKRFLNYPFQFSGGMRQRVMIAMALACHPKLLIA 178

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE T+ALDVT Q  ++ELL    +E    S+IF+THDL++     DR++ MYAGK+VE  
Sbjct: 179 DEPTTALDVTIQAQIMELLQELKEE-YGMSVIFITHDLSVATNFCDRIITMYAGKIVEEA 237

Query: 235 PMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAM 294
           P+EE+L+ P HPYT+ LLNS   +G   K  +L  IPG P +    P GC+F+ RC FAM
Sbjct: 238 PVEEILKTPLHPYTKGLLNSTLEIGSRGK--KLVPIPGNPPNPTKHPSGCKFHPRCSFAM 295

Query: 295 EDCRDVEPKLVKVGRDHYAACHLLGGES 322
           E C+  EP LV +  +H  ACHL+ GES
Sbjct: 296 EICQREEPPLVNISENHRVACHLIKGES 323


>pir||E72536 probable oligopeptide transport ATP-binding protein APE1578 -
           Aeropyrum pernix (strain K1) >gi|5105265|dbj|BAA80578.1|
           (AP000062) 324aa long hypothetical oligopeptide
           transport ATP-binding protein [Aeropyrum pernix]
           Length = 324
           
 Score =  253 bits (639), Expect = 2e-66
 Identities = 139/320 (43%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           LL V +L+ Y+ T  G V+AVDGVSF +  GEV G+AGESG GKSTL  S++ L  PP  
Sbjct: 5   LLVVEDLKTYFYTLRGIVKAVDGVSFTLRRGEVLGIAGESGSGKSTLAWSILGLVPPPGR 64

Query: 62  YKGGSAIFKGRDLMSLPRDELR-KIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
             GG  +  G D+ S+   ELR K+++ ++S++ Q AMN L P   +   + ++ + H  
Sbjct: 65  IVGGRIMIDGMDVTSMSEAELRRKVRWKKVSMVFQGAMNVLTPVYTVGRQIEEVLQIHRG 124

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             R E  + + E L  V L   +AD YP ELSGG +QR  + ++  L PD++IADE T+A
Sbjct: 125 VGRHEARQRVYELLESVGLHRSIADRYPHELSGGQKQRVVIAMALALEPDIVIADEPTTA 184

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV  Q  ++ LL     E  + SII +THDL+++ ++A+ VM+MY GK+ E GP + V 
Sbjct: 185 LDVVVQAQILNLLKKLAWEKNL-SIILITHDLSVIAELAETVMIMYGGKIAEYGPSDAVF 243

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
             P HPYTQ LL ++P++      +RL+ IPG P  L NPP GCRF+ RCP A + C   
Sbjct: 244 TKPQHPYTQALLKAIPKL--RGPIDRLAYIPGSPPDLRNPPPGCRFHPRCPKAFDRCSRE 301

Query: 301 EPKLVKVGRDHYAACHLLGG 320
           EP L +VG  H +AC L  G
Sbjct: 302 EPPLFRVGDGHLSACWLNEG 321


>gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD)
           [Archaeoglobus fulgidus] >gi|7445611|pir||A69471
           dipeptide ABC transporter, ATP-binding protein (dppD)
           homolog - Archaeoglobus fulgidus
           >gi|2648781|gb|AAB89480.1| (AE000980) dipeptide ABC
           transporter, ATP-binding protein (dppD) [Archaeoglobus
           fulgidus]
           Length = 313
           
 Score =  250 bits (631), Expect = 2e-65
 Identities = 136/320 (42%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LLD+ NL   +RT  G VRAVD VS  V +GE   + GESGCGKSTL HS++ L   P
Sbjct: 1   MMLLDIENLTTIFRTRRGVVRAVDNVSMSVEKGEFISIVGESGCGKSTLAHSVMRLIDYP 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
            E  GG  IF G DL+SL  +E+R+I+ S++ ++ Q  M +L+P ++I D + +   EH 
Sbjct: 61  GEISGGKIIFDGVDLLSLGDEEMREIRGSKIGMVFQDPMTSLDPLEKIGDQISETIMEHM 120

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              ++E  ++ RE L  V L P   D YP +LSGG RQR  + ++  LNP LLIADE T+
Sbjct: 121 DVTKKEAWQMAREMLEKVGLQPERVDSYPHQLSGGQRQRVMIAMAISLNPKLLIADEPTT 180

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALDV  Q  +++LL    +EG  ++++ +THD AL  + +DR+ VMYAG +VE+G  E++
Sbjct: 181 ALDVIVQEKIMDLLEDMKREG--RAVMLITHDFALAAERSDRIAVMYAGWLVELGKAEKL 238

Query: 240 LENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
              P HPYT+ L+ S+P +   +  + +  +PG+P  L+NPP+GCRF  RC  A + C  
Sbjct: 239 TNEPLHPYTKGLIQSVPDV---WMDKEIKPLPGFPPDLINPPEGCRFRPRCSEASKRCMK 295

Query: 300 VEPKLVKVGRDHYAACHLLG 319
             P+    GR     C L G
Sbjct: 296 EPPEFEVDGR--VVKCWLYG 313


>pir||E82301 peptide ABC transporter, ATP-binding protein VC0617 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9655050|gb|AAF93783.1| (AE004147) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 327
           
 Score =  249 bits (629), Expect = 3e-65
 Identities = 127/316 (40%), Positives = 198/316 (62%), Gaps = 4/316 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           L+ +RNL V Y T  G VRA + VSF++  GEVFG+AGESGCGKST+  SL+ L KPP  
Sbjct: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
             GG  IF G D++    + ++  ++ E+S++ Q AMNALNP   +++   D+   H   
Sbjct: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
            R + +      L +V + P   + YP + SGGMRQR  + ++  LNP ++I DE T+AL
Sbjct: 125 TREQAKRRAEGLLEIVDIHPSRLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTTAL 184

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLE 241
           DV  QR +++ + + ++E    SI+F+THDL+L+ + +DR+ +MY+G+++E+ P +++LE
Sbjct: 185 DVVVQREILQKI-YALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQILE 243

Query: 242 NPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVE 301
            P HPYT+ L +S P +     + +L+GIPG P++LL+ P+GCRF  RC    E C  V 
Sbjct: 244 TPYHPYTKGLGSSFPPL--TGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTKVP 301

Query: 302 PKLVKVGRDHYAACHL 317
             L ++    ++ CHL
Sbjct: 302 TVLRQIEHGRFSNCHL 317


>pir||E71130 probable oligopeptide transport ATP-binding protein APPD -
           Pyrococcus horikoshii >gi|3257220|dbj|BAA29903.1|
           (AP000003) 327aa long hypothetical oligopeptide
           transport ATP-binding protein APPD [Pyrococcus
           horikoshii]
           Length = 327
           
 Score =  245 bits (620), Expect = 4e-64
 Identities = 127/318 (39%), Positives = 202/318 (62%), Gaps = 8/318 (2%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP-M 60
           ++L++  L V Y+T  G V A+  VSF V +G + G+ GESG GKSTL H+++   P   
Sbjct: 3   SILEIEGLTVKYKTRYGTVHALSNVSFSVKKGSIVGIIGESGSGKSTLGHTILRTLPENA 62

Query: 61  EYKGGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRIKDIVWDLARE-H 118
             + G  +F+G DL+ +  +  R+  ++ ++S+I Q +MNA +P  RI+D + D+AR+  
Sbjct: 63  RIESGKIMFEGSDLLEIDEEVFRREFRWKKISMIFQNSMNAFSPVHRIQDQLLDVARKCF 122

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
               R E+ E+++E+L +  +   V   YP ELSGG RQR  + ++ L +P+++IADE T
Sbjct: 123 PNKSRNELLEIIKEKLRIANIDESVLKKYPHELSGGQRQRVAIGMALLADPEIVIADEPT 182

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           + LDV TQ  ++  L   +Q+ +  +++ +THD++++  ++  V+V+YAGKV+E G ++ 
Sbjct: 183 TGLDVVTQYQILNRLKE-IQKDLGITLLLITHDVSVVAALSTDVLVLYAGKVLEYGDIKR 241

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           V +N  HPYT LLL S P MG    +E+L  IPG P  L NPP GC F+ RCP+A + CR
Sbjct: 242 VFKNSHHPYTYLLLRSYPEMG----KEKLYEIPGSPPDLRNPPSGCVFHPRCPYATDLCR 297

Query: 299 DVEPKLVKVGRDHYAACH 316
             EPKLV++   H++ACH
Sbjct: 298 KEEPKLVEIEEGHFSACH 315


>pir||B72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980562|gb|AAD35168.1|AE001694_4 (AE001694)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 332
           
 Score =  244 bits (616), Expect = 1e-63
 Identities = 132/328 (40%), Positives = 197/328 (59%), Gaps = 14/328 (4%)

Query: 1   MALLDVRNLRVYYRTPV----GYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           M +L   NL+ YY   +      V+AVD V+  + E E++G+AGESGCGKSTL+ +L   
Sbjct: 1   MEVLRTENLKSYYILDIFGKKRVVKAVDDVNISIMENEIYGIAGESGCGKSTLLRALFAA 60

Query: 57  -KPPMEYKGGSAIFKGR----DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIV 111
            +PP    GG  +++      D+ SL  +E R++++S +S +PQ +M+ LNP  +IK+  
Sbjct: 61  IEPPQRIVGGKVLYRENGKEVDVYSLSDEERRRLRWSFISYVPQGSMSVLNPVVKIKETF 120

Query: 112 WDLAREHGYAD-RREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPD 170
            D    H     + E  E+ +E +  + L   + + YP +LSGGMRQR T+ ++T+L+P 
Sbjct: 121 KDFIESHTTGKTKEEAYEMAKEHIKELGLPIEILNAYPHQLSGGMRQRVTIALATVLSPK 180

Query: 171 LLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           ++IADE T+ALDV TQR V++LL   +Q     +II VTHD+ +   + DR+ +MYAGK+
Sbjct: 181 VIIADEPTTALDVVTQRGVVQLLKE-IQSSRQNTIILVTHDMGVHANVTDRIAIMYAGKI 239

Query: 231 VEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRC 290
           +E G  EE+ ENP HPYT+ L+ SLP+ G   +RE     PG P SL + P GC F+ RC
Sbjct: 240 IEEGKTEEIFENPMHPYTKYLIYSLPKFGDKGRRE---SAPGSPPSLADLPPGCSFHPRC 296

Query: 291 PFAMEDCRDVEPKLVKVGRDHYAACHLL 318
           P A + C+   P L +    H  AC L+
Sbjct: 297 PHAFDRCKKEVPPLKEYLPGHRVACWLV 324


>sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPF
           >gi|2119774|pir||I40544 oligopeptide transport
           ATP-binding protein appF - Bacillus subtilis
           >gi|677944|gb|AAA62357.1| (U20909) AppF [Bacillus
           subtilis] >gi|2633491|emb|CAB12994.1| (Z99110)
           oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus subtilis]
           Length = 329
           
 Score =  238 bits (600), Expect = 9e-62
 Identities = 134/324 (41%), Positives = 194/324 (59%), Gaps = 14/324 (4%)

Query: 3   LLDVRNLRVYY-------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           +L++R+++ Y+       +  VG V+AVDGVSF + +GE  G+ GESGCGKST   ++I 
Sbjct: 9   ILELRDVKKYFPIRSGLFQRKVGDVKAVDGVSFSLKKGETLGIVGESGCGKSTAGRTMIR 68

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
              P E   G  +FKG+D+ +L  ++LRK     + ++ Q    +LNP K ++ I+ +  
Sbjct: 69  LYKPTE---GQILFKGQDISNLSEEKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPF 125

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
             H     RE  E + E L+ V L P  A  YP E SGG RQR  +  +  LNP+L+IAD
Sbjct: 126 NTHNMYTMRERNEKVEELLARVGLHPSFAGRYPHEFSGGQRQRIGIARALTLNPELIIAD 185

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E  SALDV+ Q  VI L+   +QE    + +F++HDL+++R I+DRV VMY GK++E+  
Sbjct: 186 EPVSALDVSIQPQVINLMEE-LQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKMMELTG 244

Query: 236 MEEVLENPAHPYTQLLLNSLP--RMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFA 293
             E+ +NP HPYTQ LL+S+P  R     KRER+  + G   S  NPPKGC F+TRCP A
Sbjct: 245 KHELYDNPLHPYTQALLSSVPVTRKRGSVKRERIV-LKGELPSPANPPKGCVFHTRCPVA 303

Query: 294 MEDCRDVEPKLVKVGRDHYAACHL 317
              C++  P+  +    H+ ACHL
Sbjct: 304 KPICKEQIPEFKEAAPSHFVACHL 327


>pir||C72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981605|gb|AAD36139.1|AE001766_5 (AE001766)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 332
           
 Score =  236 bits (595), Expect = 3e-61
 Identities = 140/327 (42%), Positives = 195/327 (58%), Gaps = 11/327 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           LL ++NLR Y+ T  G V+AVDGVSFE+ EG   GV GESGCGKS    S+I L      
Sbjct: 4   LLQIKNLRTYFFTDEGVVKAVDGVSFEIEEGRTLGVVGESGCGKSVTARSIIKLLSTAGR 63

Query: 62  YKGGSAIFK--GR--DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE 117
              G  ++   G+  DL+   ++E+RK++   +++I Q  M A +P   I D + +    
Sbjct: 64  IVSGEILYNMDGQMVDLVKFSKEEIRKVRGRHIAMIFQEPMAAFSPVYTIGDQITEGMIY 123

Query: 118 HGYADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
           H    ++E  E   E L  V +    ++ D YP E SGGMRQRA + ++   NP LLIAD
Sbjct: 124 HFGITKQEARERAVELLRRVGIPKPEKMIDSYPFEYSGGMRQRAMIAMALSCNPRLLIAD 183

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E T+ALDVT Q  V++LL    QE    +I+ +TH++ ++ ++AD V+VMY G+VVE  P
Sbjct: 184 EPTTALDVTIQAQVLDLLKDLQQE-YKMAIMMITHNMGVVAEMADHVVVMYLGRVVESAP 242

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAME 295
           +EE+  NP HPYT LLL S+P +G   + ERL  I G      N PKGCRF+ RCP+ M+
Sbjct: 243 VEELFYNPKHPYTSLLLRSIPVVG--KRVERLEVIEGDVPDPRNMPKGCRFHPRCPYMMK 300

Query: 296 D-CRDVEPKLVKVGRDHYAACHLLGGE 321
             C + EP  V+VG +H  +C L GGE
Sbjct: 301 GICDEREPVEVEVGPEHRVSCFLYGGE 327


>emb|CAC11415.1| (AL445063) sporulation protein (spo0KD) related protein
           [Thermoplasma acidophilum]
           Length = 704
           
 Score =  235 bits (594), Expect = 4e-61
 Identities = 127/324 (39%), Positives = 190/324 (58%), Gaps = 16/324 (4%)

Query: 6   VRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGG 65
           +RN+ V ++T  G V A+  VSF++ +G   G+ GESG GKSTL  S++   P      G
Sbjct: 1   MRNVSVEFKTYSGIVHALSDVSFDLKQGRFLGIVGESGSGKSTLALSIMSLLPENAMMRG 60

Query: 66  SAIFKGRDLMS--------------LPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIV 111
           S   KG + +S              +  D LR I++  +S++ Q AMN+ NP   I+  +
Sbjct: 61  SIYLKGTEYISDVIINNAKKKKARKILEDNLRNIRWKNISMVFQGAMNSFNPVYTIRRQM 120

Query: 112 WDLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDL 171
           +++ + H   D  E+E+ + E L M  L+  V DMYP ELSGGM+QRA + ++  L+PD+
Sbjct: 121 FEVFKIHTTLDNDEIEKKVEEALRMAGLNISVLDMYPHELSGGMKQRAVIAMALSLDPDI 180

Query: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
           +IADE T+ LDV TQ  +I  L    + G +KS+I ++HDL ++ Q+AD VMV+YAGKV 
Sbjct: 181 VIADEPTTGLDVITQAEIISQLKKLKENGKIKSLILISHDLGVVSQLADEVMVLYAGKVF 240

Query: 232 EIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           E G    + +N A+PYT  L+ S P   +   +  + GIPG     +   KGC+F  RC 
Sbjct: 241 EYGEKSRIFQNTANPYTYKLIGSYP--SIRNAKRYVEGIPGSLPDPMKIGKGCKFADRCY 298

Query: 292 FAMEDCRDVEPKLVKVGRDHYAAC 315
            A + CR+ EP+L+KV  +HY+AC
Sbjct: 299 MARDVCREEEPELIKVEDNHYSAC 322


 Score =  167 bits (419), Expect = 1e-40
 Identities = 107/319 (33%), Positives = 174/319 (54%), Gaps = 29/319 (9%)

Query: 19  YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYK-------GGSAIFKG 71
           +VRAVD ++F + +GE+ G+ GESG GK+TL  +L+    P   K       G   I   
Sbjct: 376 FVRAVDDITFAIRKGEILGIVGESGSGKTTLGKTLLGLYSPTAGKITYSFSNGDVEITPT 435

Query: 72  RDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD--LAREH--GYADRREVE 127
                L R  +RK    E  +I Q   ++LNP   + DIV +  +AR +  G  ++ ++ 
Sbjct: 436 TSESELMRSSIRK----ETQMIFQDPYDSLNPKLTVYDIVAEPIIARRYHKGNKEKDDIY 491

Query: 128 ELLRERLSMVKLSPRVADM---------YPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
           +   E L++VK++   A +         YP ELSGG RQR     + +LN + +IADE T
Sbjct: 492 KNPLEILNLVKIALAKASLKPVENYLFRYPHELSGGERQRVATARALVLNSEFIIADEPT 551

Query: 179 SALDVTTQRVVIELLHHFM-QEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           S LDV+ +   + ++     +EGI  ++++++HD+A    ++D+++VMY GK VE+G  +
Sbjct: 552 SMLDVSIRASFMNMMKEIRSKEGI--TMVYISHDIASTYYMSDKILVMYLGKAVEMGSAD 609

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
            ++  P HPYT+ L+ ++P     +   ++  I G   + +N PKGCRFY RC +  + C
Sbjct: 610 AIINEPLHPYTKALIKAIPTPFSDWDPSKID-IIGEIGNAINVPKGCRFYNRCIYRQDIC 668

Query: 298 RDVEPKLVKVGRDHYAACH 316
           +D  P  VK   DH+  CH
Sbjct: 669 KD-NPPTVKGAEDHWYLCH 686


>pir||A72452 probable peptide transport ATP-binding protein APE2261 - Aeropyrum
           pernix (strain K1) >gi|5105962|dbj|BAA81273.1|
           (AP000064) 320aa long hypothetical peptide transport
           ATP-binding protein [Aeropyrum pernix]
           Length = 320
           
 Score =  235 bits (594), Expect = 4e-61
 Identities = 129/315 (40%), Positives = 190/315 (59%), Gaps = 8/315 (2%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           MA+LD+++L+V+Y T  G VRAVDGVS  V +GE   + GESG GKSTL  S+  L  PP
Sbjct: 5   MAVLDIQDLKVHYYTLTGIVRAVDGVSLSVNKGEWISIVGESGSGKSTLALSIPRLIMPP 64

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
               GG  ++ G DL+SL  +ELR+ +  E+ ++ Q     L+P + +   + +   EHG
Sbjct: 65  GRIVGGRILYSGVDLLSLAGEELRRYRGREIGMVFQDPTAYLDPYRTVGSQIAESLLEHG 124

Query: 120 YADR-REVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            A    E E +  + L +V +    A +YP +LSGG RQR  +  +  L P +LIADE T
Sbjct: 125 LASSGSEAESMAGDALELVGIPRDRASVYPHQLSGGQRQRVAIAAAVALEPKILIADEPT 184

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDV  Q  +++L+    +E  + +++ VTHD+ L  + +DR+ VMYAG++VEIGP E+
Sbjct: 185 TALDVVVQAKIMDLMKKLQEERGL-TVMLVTHDIGLAAEYSDRIAVMYAGELVEIGPAED 243

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           V+ NP HPYT++L+ S+P     ++   +  IPG P  L NPP GCRF+ RCP     C 
Sbjct: 244 VVSNPIHPYTEMLIKSVPDP---WEDREVKPIPGSPPDLRNPPPGCRFHPRCPLRQPLCT 300

Query: 299 DVEP--KLVKVGRDH 311
           +  P  ++V  GR H
Sbjct: 301 NTRPSLRMVDGGRGH 315


>pir||A72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981009|gb|AAD35583.1|AE001726_17 (AE001726)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 333
           
 Score =  235 bits (592), Expect = 8e-61
 Identities = 127/316 (40%), Positives = 189/316 (59%), Gaps = 6/316 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           LL+V+NL  ++    G V+AV+ VSF +   EV G+ GE+G GKS  V S++ L KPP +
Sbjct: 7   LLEVKNLSTWFYMEEGIVKAVNDVSFSLNSNEVLGIVGETGSGKSVTVKSIMRLIKPPGK 66

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G  I+KG+D++ +P  E+ +I+  E+++I Q  M +LNP   I D + +  R H   
Sbjct: 67  IVSGEIIYKGQDILKIPEKEMHRIRGKEIAMIFQDPMMSLNPLYTIGDQLMETIRYHLGY 126

Query: 122 DRREVEELLRERLSMVKLSPRVADM--YPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
           D+R       E L +V +      M  YP E SGGMRQR  + ++   NP +LIADE T+
Sbjct: 127 DKRRAYLRAVEMLELVGIPEPEKRMNNYPFEFSGGMRQRVVIAIALSCNPSVLIADEPTT 186

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALDVT Q  ++EL+    +E     +IF+THDL ++  +ADR+MVMY G+ VEIG  +++
Sbjct: 187 ALDVTIQAQILELMKELQKE-FKTGLIFITHDLGVIASMADRIMVMYGGRQVEIGTSDQI 245

Query: 240 LENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
             +P HPYT++LL S+PR  V  + E+L  IPG P  +++ P  C F  RCP  +E C  
Sbjct: 246 FYSPRHPYTKMLLRSVPR--VDKRLEKLESIPGQPPRMVDIPPVCPFLPRCPRRVERCLK 303

Query: 300 VEPKLVKVGRDHYAAC 315
             P+L ++  +HY  C
Sbjct: 304 ELPELSEIEENHYVRC 319


>gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
           Length = 362
           
 Score =  232 bits (585), Expect = 5e-60
 Identities = 134/323 (41%), Positives = 200/323 (61%), Gaps = 15/323 (4%)

Query: 3   LLDVRNLRVYYRTPVG-YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR--KPP 59
           +L+V NL V Y       ++AV+ VSF V +GE+ G+ GESG GK+TL+ S ILR  +PP
Sbjct: 45  ILEVHNLNVIYDEGNSRIIKAVNDVSFGVEKGEILGIIGESGSGKTTLI-SAILRAIRPP 103

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
            +   G  IF G D+ S+  DE RK+ + ++S +PQ + NALNP   I +I +  A  HG
Sbjct: 104 GKIISGKVIFNGMDIFSMTIDEFRKLLWKDISYVPQASQNALNPVLPISEIFYHEAISHG 163

Query: 120 YADRREVEELLRERLSMVKLSP-RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            AD++ V E   E L +V L P RV  MYP +LSGGM+QR  + +S LLNP L++ DE T
Sbjct: 164 EADKKRVIERASELLKLVGLDPARVLKMYPFQLSGGMKQRVMIALSLLLNPKLILMDEPT 223

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           SALD+  Q ++++L+ +  QE  V +I++VTHD+  + QIA+R++VMY G V+E G  EE
Sbjct: 224 SALDMLNQELLLKLIKNINQEMGV-TIVYVTHDILNIAQIANRLLVMYKGYVMEEGKTEE 282

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPIS--LLNPPKGCRFYTRCPFAMED 296
           ++++P +PYT LL++S+P +    K      +   P+   L++  KGC F  RC  A   
Sbjct: 283 IIKSPLNPYTSLLVSSIPSLKGEVK------VINVPLDEPLVSKEKGCPFLARCSKAFGR 336

Query: 297 CRDVEPKLVKVGRDHYAACHLLG 319
           C++  P+ +++  D    CHL G
Sbjct: 337 CKEELPE-IRLVYDRKVRCHLYG 358


>gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis]
           Length = 347
           
 Score =  230 bits (580), Expect = 2e-59
 Identities = 131/320 (40%), Positives = 194/320 (59%), Gaps = 7/320 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           LL+V++L+V + T  G V+AV GV+F++ +GE   + GESG GKS    +L  ++  PP 
Sbjct: 4   LLEVKDLQVSFDTHAGEVQAVRGVTFDLKKGETLAIVGESGSGKSVTSKALMGLIPNPPG 63

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
             K G  +F+GRDL  L   E+++++  ++++I Q  M +LNPT  I + + +   +H  
Sbjct: 64  RIKNGEIVFEGRDLTKLTEKEMQQVRGKDIAMIFQDPMTSLNPTMTIGNQIMEGLIKHQG 123

Query: 121 ADRREVEELLRERLSMVKLSPRVADM--YPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             + +  ++  E + +V +    A +  YP + SGGMRQR  + ++   NP LLIADE T
Sbjct: 124 MSKADARKVALELIDLVGIPNPEARLKQYPHQFSGGMRQRVVIAMALACNPKLLIADEPT 183

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++EL+    Q+    +IIF+THDL ++  +ADRV VMYAGKVVEIG ++E
Sbjct: 184 TALDVTIQAQILELMKDIQQK-TEAAIIFITHDLGVVANVADRVAVMYAGKVVEIGTVDE 242

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  NP HPYT  L+ S+P   +    E L  IPG P  LL PPKG  F  R P A++   
Sbjct: 243 IFYNPKHPYTWGLIASMP--SLDGSEEELYAIPGTPPDLLKPPKGDAFAPRNPQALKIDF 300

Query: 299 DVEPKLVKVGRDHYAACHLL 318
           +++P L KV   HYAA  LL
Sbjct: 301 EMDPPLFKVSDTHYAATWLL 320


>pir||C72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981699|gb|AAD36227.1|AE001772_6 (AE001772)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 325
           
 Score =  228 bits (576), Expect = 6e-59
 Identities = 125/330 (37%), Positives = 194/330 (57%), Gaps = 20/330 (6%)

Query: 1   MALLDVRNLRVYY-----------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTL 49
           MAL++V+NL+ Y+           R P  +V+AVDGV+F++ EG+  G+ GESG GK+T 
Sbjct: 1   MALIEVQNLKKYFPVKQGPIDVLLRKPRKFVKAVDGVNFQIDEGKSLGLVGESGSGKTTT 60

Query: 50  VHSLILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD 109
              ++  + P +   G  IF GRD+  L ++E+RK++  E+ II Q  M +LNP  R+  
Sbjct: 61  GRVILRLEEPTD---GKIIFDGRDITKLSKEEMRKLR-KEMQIIFQDPMASLNPYMRVGK 116

Query: 110 IVWDLAREHGYADRREVEELLRERLSMVKLSPR--VADMYPVELSGGMRQRATMVVSTLL 167
            +      HG  DR   +E++ E L  V L P   +   YP ELSGG RQR  +  + +L
Sbjct: 117 AIEHALEIHGIGDRSSRKEMVLEMLRRVNLEPAEDIYRRYPRELSGGQRQRVVIARALIL 176

Query: 168 NPDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYA 227
            P L++ADE  + LDV+ +  ++ LL    +E  + +++F+THDLA  + + D + VMY 
Sbjct: 177 KPRLVVADEAVAMLDVSVRSQLLRLLQELRKEFNL-TMLFITHDLATTKYVCDEIAVMYL 235

Query: 228 GKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFY 287
           GK+VEIG  E++  NP HPYTQ L++++P   +  K++ +    G   + ++ P GCRF+
Sbjct: 236 GKIVEIGDFEDIYLNPKHPYTQALISAVPEPSLKKKKKFIP--EGETPNPIDVPSGCRFH 293

Query: 288 TRCPFAMEDCRDVEPKLVKVGRDHYAACHL 317
            RCP+ M+ C   EP+L  V  +H  ACHL
Sbjct: 294 PRCPYRMDICMKEEPQLKAVEENHKVACHL 323


>pir||F71014 probable dipeptide transport ATP-binding protein dppD - Pyrococcus
           horikoshii >gi|3257835|dbj|BAA30518.1| (AP000006) 329aa
           long hypothetical dipeptide transport ATP-binding
           protein dppD [Pyrococcus horikoshii]
           Length = 329
           
 Score =  228 bits (575), Expect = 7e-59
 Identities = 127/326 (38%), Positives = 203/326 (61%), Gaps = 16/326 (4%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +L VR+L V++ T  G V+A++ VSF+V +GE F + GE+GCGKS    ++  L + P  
Sbjct: 8   ILQVRDLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67

Query: 62  YKGGSAIFKGRD-----LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
             GG  ++   D     L+ L  +E+RKI+ +E++ I Q   ++L+P   +   + +   
Sbjct: 68  IVGGQVLYYREDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHSSLDPLYTVGYQIAEAME 127

Query: 117 EHGYADRREVEELLRERLSMVK--LSP---RVADMYPVELSGGMRQRATMVVSTLLNPDL 171
            HG    + ++E +++ + ++K  L P   R  + YP ELSGGM+QR  + +    NP +
Sbjct: 128 VHGKI--KNIKEGIKKAVDILKSVLIPDPQRRVNNYPHELSGGMKQRVVIGIGLSNNPRI 185

Query: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
           LIADE T+ALDVT Q  +++L++  ++E    ++I +TH+L ++ + ADRV VMYAGK+V
Sbjct: 186 LIADEPTTALDVTVQAQILDLINQ-LKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244

Query: 232 EIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           EIG ++++ +NP HPYTQ LL ++P      K E+L  IPG   +L+NPP GCRF+ RCP
Sbjct: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLT--KIEKLEAIPGTVPNLINPPSGCRFHPRCP 302

Query: 292 FAMEDCRDVEPKLVKVGRDHYAACHL 317
            AM+ C+   P+L ++   H+ ACHL
Sbjct: 303 KAMDICKQKVPELKEIEPGHFVACHL 328


>pir||D72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981012|gb|AAD35586.1|AE001726_20 (AE001726)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 327
           
 Score =  227 bits (572), Expect = 2e-58
 Identities = 133/314 (42%), Positives = 188/314 (59%), Gaps = 7/314 (2%)

Query: 6   VRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPMEYKG 64
           + NL+ Y+ T  G V+AVDGVSFEV EGE  G+ GESG GKS    S++ L     +   
Sbjct: 1   MENLKTYFYTEDGVVKAVDGVSFEVREGETLGIVGESGSGKSVTSLSIMRLLDQNGKIVD 60

Query: 65  GSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRR 124
           G  IFKGR+L+ L  +E+RKI+  E+++I Q  M ALNP   I D + +    H     +
Sbjct: 61  GKIIFKGRNLLELSENEMRKIRGKEIAMIFQEPMVALNPVFTIGDQIMEAIILHQNVSEK 120

Query: 125 EVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALD 182
           E  ++  + L  V +    +  D YP +LSGGMRQRA + ++    P LLIADE T+ALD
Sbjct: 121 EARKMAIDLLRKVGIPEPEKRVDEYPHQLSGGMRQRAMIAMALSCRPSLLIADEPTTALD 180

Query: 183 VTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLEN 242
           VT Q  ++EL+    +E    +II +THD+ ++ +++D+V VMYAGKVVE G ++ +   
Sbjct: 181 VTIQAQILELMKELQKE-YGMAIILITHDMGVVAEMSDKVAVMYAGKVVEYGDVKTIFTE 239

Query: 243 PAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV-E 301
           P HPYT  LL S+PR+ V  ++ERL  IPG     LN P GC+F+ RC F  +   DV E
Sbjct: 240 PKHPYTYALLESIPRIDV--EQERLKSIPGNVPDPLNFPPGCKFHPRCEFFEKGKCDVEE 297

Query: 302 PKLVKVGRDHYAAC 315
           P+L  +  +H   C
Sbjct: 298 PELEDLDGNHKVRC 311


>dbj|BAB04069.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 329
           
 Score =  226 bits (569), Expect = 4e-58
 Identities = 132/322 (40%), Positives = 189/322 (57%), Gaps = 6/322 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           LL VR L+ Y+ T  G V +V+GVSFEV  GE   V GESGCGKS    S++ L + P +
Sbjct: 6   LLSVRELKTYFYTESGAVPSVNGVSFEVKHGETVAVVGESGCGKSVTSLSIMGLVRSPGK 65

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
             GG   F G+DL ++   E RK++ +ELS+I Q  + +LNP   I + + ++  +H   
Sbjct: 66  IVGGDIRFNGQDLTTISEREYRKLRGNELSMIFQEPLTSLNPLFTIGNQLGEVILQHQQV 125

Query: 122 DRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
            + E ++   E L  V +  + +V   YP +LSGGMRQR  + ++    P LLIADE T+
Sbjct: 126 TKEEAKQKGIEMLKKVGIPRAEQVYRSYPHQLSGGMRQRVMIAMALACEPKLLIADEPTT 185

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALDVT Q  +++L+   ++E    +I+ +THDL ++ ++AD V+VMYAG+VVE   +  +
Sbjct: 186 ALDVTIQAQILQLMRKLVKENDT-AILLITHDLGVVAEMADTVIVMYAGQVVEQADVFTL 244

Query: 240 LENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
              PAHPYTQ LL S P   +H   E+L  I G   +    PKGCRF+ RC  A E C  
Sbjct: 245 FATPAHPYTQGLLASTP--NIHASGEKLQSIEGTVPTHETMPKGCRFFPRCLHATEQCVH 302

Query: 300 VEPKLVKVGRDHYAACHLLGGE 321
            EP L+K GR  +  C L  G+
Sbjct: 303 QEPPLMKTGRGQHVRCWLFDGK 324


>gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
           Length = 331
           
 Score =  225 bits (568), Expect = 5e-58
 Identities = 127/318 (39%), Positives = 194/318 (60%), Gaps = 13/318 (4%)

Query: 4   LDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPMEY 62
           + V+NL V Y +  G ++ +  VS ++ E ++ GVAGESG GKSTL  +++    PP+  
Sbjct: 6   ISVKNLNVGYLSDYGIIKVLRNVSIDIPESKIIGVAGESGSGKSTLATTIMGFVNPPLYV 65

Query: 63  KGGSAIFKGR-DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG-- 119
           + GS I   + D++S+ RDEL KI+ S +S +PQ A N+LNP +++K+   D+ +  G  
Sbjct: 66  ERGSIIVDSKYDILSMSRDELNKIRGSVISYVPQAAQNSLNPIRKVKETFTDILKAKGMD 125

Query: 120 -YADRREVEELLRERLSMVKLSPR-VADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
            YA+   V   L E    V L+ R V DMYP +LSGGM+QR  + +S LLNP +LI DE 
Sbjct: 126 YYANIDVVYNTLEE----VGLTDRQVLDMYPFQLSGGMKQRVVIAISLLLNPKILIMDEP 181

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ LDV  Q  +++LL    +E  + +++ ++HD+A+L QI+D + VMY G++VE G   
Sbjct: 182 TTGLDVVVQYEILKLLKKIQKEKDL-TLVVISHDIAMLFQISDYIAVMYGGQIVEYGKYN 240

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
            +LE   HPYT LLL+S+P   V  + ++L  IPG     +  PKGC F +RCPF    C
Sbjct: 241 TLLEEAYHPYTYLLLSSVPT--VRSRGKKLPRIPGDFEGFIRYPKGCVFSSRCPFVTSTC 298

Query: 298 RDVEPKLVKVGRDHYAAC 315
           ++V P++V   +  +  C
Sbjct: 299 KEVPPQIVAYDKFGFYKC 316


>sp|Q53193|Y4TR_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN Y4TR
           >gi|1486422|emb|CAA92400.1| (Z68203) OppD homologue
           [Rhizobium sp.] >gi|2182648|gb|AAB91871.1| (AE000098)
           Y4tR [Rhizobium sp. NGR234]
           Length = 335
           
 Score =  224 bits (565), Expect = 1e-57
 Identities = 125/319 (39%), Positives = 192/319 (60%), Gaps = 10/319 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LLDVR+L  ++       RA+ GV+F V  GE+ G+ GESGCGKS    S++   P    
Sbjct: 12  LLDVRDLETHFYGEESVTRALGGVNFHVKSGEMLGIVGESGCGKSVTALSILRLLPKQTA 71

Query: 63  K--GGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           K  GG  IFKGR+L+ L   ++R+++ + +++I Q  M +L+P   +   + +  + HG 
Sbjct: 72  KTVGGEVIFKGRNLLELSERQMREVRGNRIAMIFQDPMTSLSPVHTVGRQIAEAVQIHGR 131

Query: 121 ADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             R E  E   E L +V+++   R  + YP E+SGGMRQRA + ++   +P+LLIADE T
Sbjct: 132 VSRAEALEKALEMLRLVRIADPERRLNNYPHEMSGGMRQRAMIAMALACSPELLIADEPT 191

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++ L+   +++ +  +++F+THDL ++ +   RV+VMYAG++VE   + +
Sbjct: 192 TALDVTIQAQILRLIVD-LKDRMGTAVMFITHDLGVVAETCQRVIVMYAGRIVEQASVTD 250

Query: 239 VLENPAHPYTQLLLNSLP--RMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           +   P HPYT+ L+NS+P  R G   ++ RL  IPG   SL  P  GC F  RCPFA+  
Sbjct: 251 LFARPTHPYTRALMNSVPDRRRG---RQSRLPEIPGVVPSLREPLVGCSFAERCPFAIGV 307

Query: 297 CRDVEPKLVKVGRDHYAAC 315
           CR+  P L ++   H AAC
Sbjct: 308 CREKMPVLSEIQPGHAAAC 326


>pir||T34759 oligopeptide ABC transporter ATP-binding protein - Streptomyces
           coelicolor >gi|3402246|emb|CAA20182.1| (AL031184)
           oligopeptide ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 365
           
 Score =  224 bits (564), Expect = 1e-57
 Identities = 128/328 (39%), Positives = 195/328 (59%), Gaps = 14/328 (4%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A L+VR+L+V++ T  G V++VDG+SF++ +G+  G+ GESG GKS     ++      +
Sbjct: 23  AFLEVRDLKVHFPTDDGLVKSVDGLSFQLEKGKTLGIVGESGSGKSVTSLGIMGLHTAGQ 82

Query: 62  YK------GGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
           Y        G     G +L+S   D +RK++  E+++I Q  ++AL+P   I   + +  
Sbjct: 83  YGKRKARISGEIWLDGTELLSADPDHVRKLRGREMAMIFQDPLSALHPYYTIGQQIVEAY 142

Query: 116 REHGYADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
           R H   D++  +    E L  V +    +  D YP E SGGMRQRA + +S + NP+LLI
Sbjct: 143 RIHHKVDKKTAKRRAVEMLDRVGIPQPDKRVDSYPHEFSGGMRQRAMIAMSLVNNPELLI 202

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE T+ALDVT Q  +++L+    +E    ++I +THDL ++ ++AD ++VMY G+ VE 
Sbjct: 203 ADEPTTALDVTVQAQILDLIRDLQKE-FGSAVIVITHDLGVVAELADDLLVMYGGRCVER 261

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFA 293
           GP E+V   P HPYT  LL S+PR+    ++ERL  + G P SL+N P GC F  RCP+A
Sbjct: 262 GPAEKVFYEPRHPYTWGLLGSMPRLD-RDQQERLIPVKGSPPSLINLPSGCAFNPRCPYA 320

Query: 294 ----MEDCRDVEPKLVKVGRDHYAACHL 317
                +  R V P+L +VG  H+AACH+
Sbjct: 321 DVPKDDVTRTVRPELTEVGSKHWAACHM 348


>gb|AAA62691.1| (M57689) sporulation protein [Bacillus subtilis]
           Length = 358
           
 Score =  223 bits (562), Expect = 2e-57
 Identities = 124/320 (38%), Positives = 192/320 (59%), Gaps = 6/320 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           LL+V++L + ++T  G V+A+ GV+F + +GE   + GESG GKS    ++  ++  PP 
Sbjct: 7   LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
            +K G  +F+G+DL+ L   E++ ++  E+ +I Q  M +LNPT ++   + ++  +H  
Sbjct: 67  YFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEK 126

Query: 121 ADRREVEELLRERLSMV--KLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             +   ++   E L +V   +  +  + +P E SGGMRQR  + ++   NP LLIADE T
Sbjct: 127 ISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPT 186

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++EL+   +Q+ I  SIIF+THDL ++  +ADRV VMYAG++VE G ++E
Sbjct: 187 TALDVTIQAQILELMKD-LQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDE 245

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  +P HPYT  LL S+P +      E L+ IPG P  L NPPKG  F  R  +AM+   
Sbjct: 246 IFYDPRHPYTWGLLASMPTL-ESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMKIDF 304

Query: 299 DVEPKLVKVGRDHYAACHLL 318
           + EP + KV   HY    LL
Sbjct: 305 EQEPPMFKVSDTHYVKSWLL 324


>pir||D38447 sporulation initiation protein spo0KD - Bacillus subtilis
           >gi|580898|emb|CAA39790.1| (X56347) OppD [Bacillus
           subtilis]
           Length = 336
           
 Score =  223 bits (562), Expect = 2e-57
 Identities = 124/320 (38%), Positives = 192/320 (59%), Gaps = 6/320 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           LL+V++L + ++T  G V+A+ GV+F + +GE   + GESG GKS    ++  ++  PP 
Sbjct: 7   LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
            +K G  +F+G+DL+ L   E++ ++  E+ +I Q  M +LNPT ++   + ++  +H  
Sbjct: 67  YFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEK 126

Query: 121 ADRREVEELLRERLSMV--KLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             +   ++   E L +V   +  +  + +P E SGGMRQR  + ++   NP LLIADE T
Sbjct: 127 ISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPT 186

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++EL+   +Q+ I  SIIF+THDL ++  +ADRV VMYAG++VE G ++E
Sbjct: 187 TALDVTIQAQILELMKD-LQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDE 245

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  +P HPYT  LL S+P +      E L+ IPG P  L NPPKG  F  R  +AM+   
Sbjct: 246 IFYDPRHPYTWGLLASMPTL-ESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMKIDF 304

Query: 299 DVEPKLVKVGRDHYAACHLL 318
           + EP + KV   HY    LL
Sbjct: 305 EQEPPMFKVSDTHYVKSWLL 324


>sp|P24136|OPPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|7442529|pir||B69669 oligopeptide transport
           ATP-binding protein oppD - Bacillus subtilis
           >gi|2633500|emb|CAB13003.1| (Z99110) oligopeptide ABC
           transporter (ATP-binding protein) [Bacillus subtilis]
           Length = 358
           
 Score =  223 bits (562), Expect = 2e-57
 Identities = 124/320 (38%), Positives = 192/320 (59%), Gaps = 6/320 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           LL+V++L + ++T  G V+A+ GV+F + +GE   + GESG GKS    ++  ++  PP 
Sbjct: 7   LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
            +K G  +F+G+DL+ L   E++ ++  E+ +I Q  M +LNPT ++   + ++  +H  
Sbjct: 67  YFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEK 126

Query: 121 ADRREVEELLRERLSMV--KLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             +   ++   E L +V   +  +  + +P E SGGMRQR  + ++   NP LLIADE T
Sbjct: 127 ISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPT 186

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++EL+   +Q+ I  SIIF+THDL ++  +ADRV VMYAG++VE G ++E
Sbjct: 187 TALDVTIQAQILELMKD-LQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDE 245

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  +P HPYT  LL S+P +      E L+ IPG P  L NPPKG  F  R  +AM+   
Sbjct: 246 IFYDPRHPYTWGLLASMPTL-ESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMKIDF 304

Query: 299 DVEPKLVKVGRDHYAACHLL 318
           + EP + KV   HY    LL
Sbjct: 305 EQEPPMFKVSDTHYVKSWLL 324


>pir||B72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980543|gb|AAD35151.1|AE001692_8 (AE001692)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 338
           
 Score =  223 bits (562), Expect = 2e-57
 Identities = 130/330 (39%), Positives = 189/330 (56%), Gaps = 20/330 (6%)

Query: 1   MALLDVRNLRVYY-------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           M LL+V+ L+ Y+       +  VGYVRAVD VSF++ +GE   + GESGCGK+T   S+
Sbjct: 1   MKLLEVKGLKKYFPLTKGFFKKVVGYVRAVDDVSFDIKQGETLALVGESGCGKTTTAKSI 60

Query: 54  ILRKPPMEYKGGSAIFK--GRD--LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD 109
           +    P +   G  I    G+D  +  L RDEL+  +   + +I Q    +LNP  ++K+
Sbjct: 61  LRAIDPTD---GDVILHLDGKDVNIAKLSRDELKPYR-RYMQMIFQNPYTSLNPRMKVKE 116

Query: 110 IVWDLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNP 169
           IV +    +G A  +E+E+ + E L  V L P     YP   SGG RQR  +  +  L P
Sbjct: 117 IVGEPLLVNGIAKGKELEDRVAELLKAVGLRPEYMIRYPHAFSGGQRQRIVIARAIALRP 176

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            L++ DE TSALDV+ +  ++ LL   +QE    + +F+THDL+++  I+DRV VMY GK
Sbjct: 177 KLVVCDEPTSALDVSIRAQILNLLMD-LQEEFALTYLFITHDLSVVEHISDRVAVMYLGK 235

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTR 289
           +VE+   EE+ ENP HPYT+ LL S+P+      RE L  I G   +  NPP GC F+ R
Sbjct: 236 IVELSSTEEIFENPKHPYTETLLRSVPKPDPDL-REELVPIEGEVPNPANPPSGCYFHPR 294

Query: 290 CPFAMEDCRDVEPKLVKVGRD---HYAACH 316
           CP+A   C++  P+   +G +   HY ACH
Sbjct: 295 CPYAKSICKEEYPEFRNLGTEDNPHYVACH 324


>gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocytogenes]
           Length = 358
           
 Score =  223 bits (562), Expect = 2e-57
 Identities = 127/320 (39%), Positives = 187/320 (57%), Gaps = 7/320 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP--M 60
           LL+V++L + + T  G V+A+ GV+F++ +GE   + GESG GKS    S++   P    
Sbjct: 4   LLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESGSGKSVTTKSIMRLLPEGNS 63

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E K G  +F G D+      +++KI+  ++++I Q  M +LNPT  I   + +   +H  
Sbjct: 64  EIKSGQILFNGMDIAKAHEKQMQKIRGKDIAMIFQDPMTSLNPTMTIGKQISEPLIKHQK 123

Query: 121 ADRREVEELLRERLSMVKLS--PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             + E  +     L +V ++        YP + SGGMRQR  + +S   NP +LIADE T
Sbjct: 124 ISKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGMRQRVVIAISLACNPQILIADEPT 183

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  +++L+   +Q+ I  SIIF+THDL ++  +ADRV VMY GK+VEIG ++E
Sbjct: 184 TALDVTIQAQILDLMKD-LQKKIDTSIIFITHDLGVVANVADRVAVMYGGKIVEIGTVDE 242

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  NP HPYT  L++S+P +      E L  IPG P  LL+PPKG  F  R  +AM+   
Sbjct: 243 IFYNPQHPYTWGLISSMPTLDT--DDEELFVIPGTPPDLLHPPKGDAFAARNKYAMQIDL 300

Query: 299 DVEPKLVKVGRDHYAACHLL 318
           + EP L KV   HYAA  LL
Sbjct: 301 EEEPPLFKVSDTHYAATWLL 320


>pir||H75117 peptide abc transporter ATP-binding protein PAB1874 - Pyrococcus
           abyssi (strain Orsay) >gi|5458168|emb|CAB49657.1|
           (AJ248285) PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN
           [Pyrococcus abyssi]
           Length = 329
           
 Score =  222 bits (560), Expect = 4e-57
 Identities = 126/326 (38%), Positives = 200/326 (60%), Gaps = 16/326 (4%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           +L VRNL V++ T  G V+A++ VSF+V +GE F + GE+GCGKS    ++  ++  P  
Sbjct: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67

Query: 61  EYKGGSAIFKGR----DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
             +G    ++      DL+ L  +E+RKI+ +E++ I Q    +L+P   +   + +   
Sbjct: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127

Query: 117 EHGYADRREVEELLRERLSMVK--LSP---RVADMYPVELSGGMRQRATMVVSTLLNPDL 171
            HG    + ++E +++ + ++K  L P   R  + YP ELSGGM+QR  + +    NP +
Sbjct: 128 VHGKI--KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185

Query: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
           LIADE T+ALDVT Q  +++LL+  M+E    ++I +TH+L ++ + ADRV VMYAGK+V
Sbjct: 186 LIADEPTTALDVTIQAQILDLLNK-MKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244

Query: 232 EIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           EIG ++++ +NP HPYTQ LL ++P      K E+L  IPG   +L+ PP GCRF+ RCP
Sbjct: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLT--KIEKLEAIPGTVPNLITPPGGCRFHPRCP 302

Query: 292 FAMEDCRDVEPKLVKVGRDHYAACHL 317
             M  C++  P+L ++   H+ ACHL
Sbjct: 303 KVMSICKEKVPELKEIEPGHFVACHL 328


>pir||D72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981700|gb|AAD36228.1|AE001772_7 (AE001772)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 323
           
 Score =  222 bits (559), Expect = 6e-57
 Identities = 130/322 (40%), Positives = 189/322 (58%), Gaps = 5/322 (1%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +L+++N+ V Y+T    V AV+ VSF + +GE  G+ GESGCGKSTL  S++   P  
Sbjct: 1   MKVLELKNVSVRYKTGEKTVNAVENVSFHLEKGETLGLVGESGCGKSTLGFSIMRLLPKG 60

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH-G 119
               GS   +G D+ SL  +E+R+I+ S++++I Q  M +LNP  RI+D   ++   H  
Sbjct: 61  TKIDGSIKIEGIDISSLSDEEMRQIRGSKVAMIFQDPMTSLNPILRIEDHFVEMILTHRP 120

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              + +  EL  + L  V ++      YP + SGGMRQR  + +S +LNP +LIADE T+
Sbjct: 121 ELSKEDARELAAKALEDVGINRNRLKDYPFQFSGGMRQRVMIALSIVLNPAVLIADEPTT 180

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           +LDV  Q  ++ELL    +E    ++I +THD+ L+ + ADR+ VMYAG +VE+   E +
Sbjct: 181 SLDVIVQAQIMELLEKLTKEHRT-AMILITHDMGLVAEAADRIGVMYAGHLVELASKERI 239

Query: 240 LENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
             NP HPYT  LL S+P   V+ K  R   IPG P  L NPP+GCRF  RC  AM+ C +
Sbjct: 240 FTNPLHPYTVGLLRSIPNTDVNDKELRY--IPGSPPDLSNPPEGCRFAPRCEKAMKICWE 297

Query: 300 VEPKLVKVGRDHYAACHLLGGE 321
            EP   ++       C L GG+
Sbjct: 298 KEPPEFEIDGTR-VKCWLYGGD 318


>pir||G71014 probable dipeptide transport ATP-binding protein dppF - Pyrococcus
           horikoshii >gi|3257836|dbj|BAA30519.1| (AP000006) 329aa
           long hypothetical dipeptide transport ATP-binding
           protein dppF [Pyrococcus horikoshii]
           Length = 329
           
 Score =  222 bits (559), Expect = 6e-57
 Identities = 128/325 (39%), Positives = 195/325 (59%), Gaps = 17/325 (5%)

Query: 3   LLDVRNLRVYYRT-----PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRK 57
           +L V NL+ Y+        VG+V+AVDGVSFE+ +GE FG+ GESGCGK+T   +++   
Sbjct: 8   VLKVENLKKYFPVRGLLRTVGWVKAVDGVSFEIYKGETFGLVGESGCGKTTTGRTILRLI 67

Query: 58  PPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE 117
            P +   G  IF G+D+  L  +EL+  +  +  I+ Q   ++L+P + +  I+ +  R 
Sbjct: 68  EPTD---GRIIFMGKDVTKLKGNELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVRF 123

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
           HG     + EE + + L  V L+      YP E SGG RQR  +     L P+ ++ DE 
Sbjct: 124 HGI-QVDDPEEFVIKLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 182

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           TSALDV+ Q  ++  L   +QE    + +F++HDL +++ ++DR+ VMY GK+VE+GP +
Sbjct: 183 TSALDVSVQANILNTLKE-LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 241

Query: 238 EVLENPAHPYTQLLLNSL----PRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFA 293
           +V ENP HPYTQ+L +++    P +    K++R+  + G P S +NPPKGCRF+ RCP+A
Sbjct: 242 KVFENPLHPYTQMLFSAIPIPDPDIAREMKKKRMK-VTGEPPSPVNPPKGCRFHPRCPYA 300

Query: 294 MED-CRDVEPKLVKVGRDHYAACHL 317
               C   EP LV+V +DHY AC L
Sbjct: 301 KAGLCDKKEPPLVEVEKDHYVACWL 325


>pir||C72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980544|gb|AAD35152.1|AE001692_9 (AE001692)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 331
           
 Score =  221 bits (558), Expect = 7e-57
 Identities = 130/329 (39%), Positives = 189/329 (56%), Gaps = 13/329 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           +L++R+L+VY+    G V+AVDGVSF++  GE+ G+ GESGCGKS    S+  IL K   
Sbjct: 4   VLEIRDLKVYFDLTEGTVKAVDGVSFDIRRGEILGLVGESGCGKSVTAQSILRILPKSAR 63

Query: 61  EYKGGSAIFKGRDLMSLPR-----DELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
              G     +    + L R     +E+R I+  ++S+I Q  M + +P   +   + +  
Sbjct: 64  IVNGEIVFHRNGKTLDLTRLDPEGEEIRDIRGKDISMIFQEPMASFSPVYTVGAQMIEAI 123

Query: 116 REHGYADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
             H    + E  + + E L  VK+  + +V DMYP ELSGGM QR  + ++  LNP LL+
Sbjct: 124 LLHENVSKEEARKRVVEMLKKVKIPNAEKVVDMYPFELSGGMLQRCMIAMAMSLNPTLLL 183

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE T+ALDVT Q  ++ L+    +E    SI+ +THD+ ++ Q+ADRV VMY G +VE 
Sbjct: 184 ADEPTTALDVTIQAQILYLMKELQKE-YHSSILLITHDMGVVAQMADRVAVMYLGNIVET 242

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFA 293
             + E+ +NP HPYTQ LL S+P++G+  ++ RL  I G      N P GCRF+ RC   
Sbjct: 243 AEVFELFKNPLHPYTQALLRSIPKIGI--RKTRLETIKGMVPDPYNLPTGCRFHNRCEKF 300

Query: 294 MEDCRDV-EPKLVKVGRDHYAACHLLGGE 321
           M+   DV EP  V+V   H   C L GGE
Sbjct: 301 MKGLCDVKEPPEVEVKPGHKVKCFLYGGE 329


>pir||H75380 peptide ABC transporter, ATP-binding protein - Deinococcus
           radiodurans (strain R1)
           >gi|6459331|gb|AAF11130.1|AE002000_6 (AE002000) peptide
           ABC transporter, ATP-binding protein [Deinococcus
           radiodurans]
           Length = 386
           
 Score =  220 bits (556), Expect = 1e-56
 Identities = 126/329 (38%), Positives = 190/329 (57%), Gaps = 17/329 (5%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKS--TLVHSLILRKPPM 60
           LL V NL+ Y+ T  G V++VDGV+F + +GE   V GESG GKS  +L    ++  PP 
Sbjct: 33  LLAVNNLKTYFNTDDGVVKSVDGVTFHIKKGETLAVVGESGSGKSVTSLTVMRLIPMPPG 92

Query: 61  EYKGGSAIFKGRD-----LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
           +  GG  +F G+D     L+++   E+R+I+ +++S+I Q  M +LNP   + D + +  
Sbjct: 93  QIAGGEILFTGKDGVQRNLVNVSEAEMRRIRGNDISMIFQEPMTSLNPVYTVGDQIAEAV 152

Query: 116 REHGYADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
             H    R+E  ++  + L  V +    +  + YP ++SGGMRQR  + ++    P LLI
Sbjct: 153 VLHQGKTRKEAMDVATDMLRFVGIPAPEKRVNEYPHQMSGGMRQRVMIAMALSCKPALLI 212

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE T+ALDVT Q  +++L+ +  +E +  SI+F+TH+L ++ ++ADRV+VMY G+VVE 
Sbjct: 213 ADEPTTALDVTIQAQILDLMRNLQRE-VGMSILFITHNLGVVAEMADRVVVMYGGRVVEE 271

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVH-------YKRERLSGIPGYPISLLNPPKGCRF 286
           G + E+ + P HPYT  LLNS+PR             ++RL  IPG   + LN P GC F
Sbjct: 272 GDVIEIFKAPRHPYTMGLLNSIPRPSEDEHAHVPGQPKKRLEAIPGNVPNPLNLPPGCTF 331

Query: 287 YTRCPFAMEDCRDVEPKLVKVGRDHYAAC 315
             RC FA+  C    P L   G  H A C
Sbjct: 332 EPRCKFAVPQCSQAVPALEDTGGGHMARC 360


>sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|1075084|pir||C64184 oligopeptide transport
           ATP-binding protein oppD - Haemophilus influenzae
           (strain Rd KW20) >gi|1574676|gb|AAC22775.1| (U32792)
           oligopeptide ABC transporter, ATP-binding protein (oppD)
           [Haemophilus influenzae Rd]
           Length = 323
           
 Score =  220 bits (555), Expect = 2e-56
 Identities = 128/317 (40%), Positives = 189/317 (59%), Gaps = 6/317 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LLDV+NL V ++TP G V AV+ ++F +  G   G+ GESG GKS    +L+        
Sbjct: 4   LLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANGE 63

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
             GSAIF+G++L++LP  EL KI+  ++S+I Q  M +LNP  +I + + ++ + H   D
Sbjct: 64  VEGSAIFEGKELVNLPNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHKGYD 123

Query: 123 RREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           ++       + L  VK+  + +   MYP E SGGMRQR  + ++ L  P LLIADE T+A
Sbjct: 124 KQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 183

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVT Q  ++ LL+   +E    +II +THDL ++  I D+VMVMYAG+ +E G  E++ 
Sbjct: 184 LDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQIF 242

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
            +P HPY+  L++++PR+  +   E L  IPG P +LL+ PKGC F  RC FA E C+ +
Sbjct: 243 YHPTHPYSIGLMDAIPRLDGN--EEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQCQ-I 299

Query: 301 EPKLVKVGRDHYAACHL 317
            PKL          C L
Sbjct: 300 APKLTTFNHGQLRNCWL 316


>dbj|BAA14778.1| (D90763) Oligopeptide transport ATP-binding protein OppD.
           [Escherichia coli] >gi|1805527|dbj|BAA16041.1| (D90852)
           Oligopeptide transport ATP-binding protein OppD.
           [Escherichia coli]
           Length = 337
           
 Score =  220 bits (555), Expect = 2e-56
 Identities = 126/303 (41%), Positives = 180/303 (58%), Gaps = 5/303 (1%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           ALL+V++LRV + TP G V AV+ ++F +  GE  G+ GESG GKS    +L+       
Sbjct: 18  ALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANG 77

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
             GGSA F GR++++LP  EL K++  ++S+I Q  M +LNP  R+ + + ++   H   
Sbjct: 78  RIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNM 137

Query: 122 DRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
            + E  E     L  VK+  + +   MYP E SGGMRQR  + ++ L  P LLIADE T+
Sbjct: 138 SKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 197

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALDVT Q  ++ LL+   +E    +II +THDL ++  I D+V+VMYAG+ +E G   +V
Sbjct: 198 ALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDV 256

Query: 240 LENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
              P HPY+  LLN++PR+    + E +  IPG P +LL  PKGC F  RCP AME C  
Sbjct: 257 FYQPVHPYSIGLLNAVPRLDA--EGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSS 314

Query: 300 VEP 302
             P
Sbjct: 315 APP 317


>sp|P76027|OPPD_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|7442530|pir||A64872 oligopeptide transport
           ATP-binding protein oppD - Escherichia coli
           >gi|1787499|gb|AAC74328.1| (AE000223) homolog of
           Salmonella ATP-binding protein of oligopeptide ABC
           transport system [Escherichia coli K12]
           Length = 337
           
 Score =  220 bits (555), Expect = 2e-56
 Identities = 126/303 (41%), Positives = 180/303 (58%), Gaps = 5/303 (1%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           ALL+V++LRV + TP G V AV+ ++F +  GE  G+ GESG GKS    +L+       
Sbjct: 18  ALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANG 77

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
             GGSA F GR++++LP  EL K++  ++S+I Q  M +LNP  R+ + + ++   H   
Sbjct: 78  RIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNM 137

Query: 122 DRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
            + E  E     L  VK+  + +   MYP E SGGMRQR  + ++ L  P LLIADE T+
Sbjct: 138 SKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 197

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALDVT Q  ++ LL+   +E    +II +THDL ++  I D+V+VMYAG+ +E G   +V
Sbjct: 198 ALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDV 256

Query: 240 LENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
              P HPY+  LLN++PR+    + E +  IPG P +LL  PKGC F  RCP AME C  
Sbjct: 257 FYQPVHPYSIGLLNAVPRLDA--EGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSS 314

Query: 300 VEP 302
             P
Sbjct: 315 APP 317


>pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf) PAB1875 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458167|emb|CAB49656.1| (AJ248285) dipeptide ABC
           transporter, ATP-binding protein (dppF) [Pyrococcus
           abyssi]
           Length = 326
           
 Score =  220 bits (554), Expect = 2e-56
 Identities = 126/326 (38%), Positives = 194/326 (58%), Gaps = 19/326 (5%)

Query: 3   LLDVRNLRVYY------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           +L V NL+ Y+      RT +G+V+AVDGVSFE+  GE FG+ GESGCGK+T   +++  
Sbjct: 5   VLKVENLKKYFPIRGLFRT-IGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
             P +   G  IF G+D+  L  +EL+  +  +  I+ Q   ++L+P + +  I+ +  +
Sbjct: 64  IEPTD---GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            HG     + EE +   L  V L+      YP E SGG RQR  +     L P+ ++ DE
Sbjct: 120 FHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            TSALDV+ Q  ++  L   +QE    + +F++HDL +++ ++DR+ VMY GK+VE+GP 
Sbjct: 179 PTSALDVSVQANILNTLKE-LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237

Query: 237 EEVLENPAHPYTQLLLNSL----PRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPF 292
           + + ENP HPYTQ+L +++    P +    K++R+  + G P S +NPPKGCRF+ RCP+
Sbjct: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKGCRFHPRCPY 296

Query: 293 AMED-CRDVEPKLVKVGRDHYAACHL 317
           A    C   EP +V+V +DHY AC L
Sbjct: 297 AKAGLCDKEEPPMVEVEKDHYVACWL 322


>sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD >gi|98274|pir||S16650
           dipeptide transport ATP-binding protein dppD - Bacillus
           subtilis >gi|48807|emb|CAA40005.1| (X56678) dciAD
           [Bacillus subtilis] >gi|2632016|emb|CAA05575.1|
           (AJ002571) DppD [Bacillus subtilis]
           >gi|2633649|emb|CAB13152.1| (Z99110) dipeptide ABC
           transporter (ATP-binding protein) [Bacillus subtilis]
           Length = 335
           
 Score =  219 bits (553), Expect = 3e-56
 Identities = 128/319 (40%), Positives = 182/319 (56%), Gaps = 7/319 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           +L V+NL V + T  G V+AV GVSF++ +GE F + GESGCGKS    S++   PP   
Sbjct: 4   VLSVQNLHVSFTTYGGTVQAVRGVSFDLYKGETFAIVGESGCGKSVTSQSIMGLLPPYSA 63

Query: 63  K--GGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           K   G  +FK +DL  L   E+R I+ +++S+I Q  M ALNPT  + D + +    H  
Sbjct: 64  KVTDGRILFKNKDLCRLSDKEMRGIRGADISMIFQDPMTALNPTLTVGDQLGEALLRHKK 123

Query: 121 ADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             ++   + +   LS+V +         YP + SGGMRQR  + ++ +  PD+LIADE T
Sbjct: 124 MSKKAARKEVLSMLSLVGIPDPGERLKQYPHQFSGGMRQRIVIAMALICEPDILIADEPT 183

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++EL     ++  V S+I +THDL ++ Q+ADRV VMYAGK+ EIG  ++
Sbjct: 184 TALDVTIQAQILELFKEIQRKTDV-SVILITHDLGVVAQVADRVAVMYAGKMAEIGTRKD 242

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +   P HPYT+ LL S+PR+ ++     L+ I G P  L +PP GC F  RCP  M  C 
Sbjct: 243 IFYQPQHPYTKGLLGSVPRLDLN--GAELTPIDGTPPDLFSPPPGCPFAARCPNRMVVCD 300

Query: 299 DVEPKLVKVGRDHYAACHL 317
            V P        H   C L
Sbjct: 301 RVYPGQTIRSDSHTVNCWL 319


>emb|CAC05750.1| (AL391751) putative peptide transport system ATP-binding protein
           [Streptomyces coelicolor]
           Length = 327
           
 Score =  219 bits (553), Expect = 3e-56
 Identities = 124/321 (38%), Positives = 187/321 (57%), Gaps = 10/321 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           LL+VR+L V + T  G  +AV+GVS+ V  GE   V GESG GKS    ++  IL  PP 
Sbjct: 2   LLEVRDLHVEFHTRDGVAKAVNGVSYGVDAGETLAVLGESGSGKSVTAQTIMGILDIPPG 61

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G  +F+GRDL+ L  +E RK++ +E+++I Q A+++LNP   +   + ++   H  
Sbjct: 62  RVTAGEILFEGRDLLKLKEEERRKVRGAEMAMIFQDALSSLNPVLTVGAQLAEMFTVHRG 121

Query: 121 ADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             R++      E +  V++  +      YP + SGGMRQR  + ++  L P L+IADE T
Sbjct: 122 MSRKDAHAKAVELMDRVRIPAAKERVRQYPHQFSGGMRQRIMIAMAMALEPKLIIADEPT 181

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  V++LL    +E +   +I +THDL ++  +AD++ VMYAG++VE  P+ +
Sbjct: 182 TALDVTVQAQVMDLLAELQRE-LHMGLILITHDLGVVADVADKIAVMYAGRIVETAPVHD 240

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           + + PAHPYT+ LL S+PR+    K + L  I G P +L   P GC F+ RCP A + CR
Sbjct: 241 IYKAPAHPYTRGLLESIPRL--DQKGQELYAIKGLPPNLTRIPPGCAFHPRCPMAQDVCR 298

Query: 299 DVEPKLVKV---GRDHYAACH 316
              P L  V     +  +ACH
Sbjct: 299 TDVPPLYDVTESDAERGSACH 319


>gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dppD-3) [Sulfolobus
           solfataricus]
           Length = 324
           
 Score =  219 bits (552), Expect = 4e-56
 Identities = 126/313 (40%), Positives = 187/313 (59%), Gaps = 11/313 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +L +RNL VYY T + +V+ +  V+ +V +GE+ GV GESG GKSTL H++    PP 
Sbjct: 4   MVVLQIRNLNVYYNTLISWVKVLSDVNLDVEKGEIVGVVGESGSGKSTLGHAISRILPPN 63

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA--REH 118
               G  I  G +L  L   EL+K + + + +I Q  +N+LNP K++   + +    R  
Sbjct: 64  ARIQGDIIVDGVNLAKLKDSELQKYRGTWVFMIFQNPLNSLNPVKKVGSQLLEAVKIRYQ 123

Query: 119 GYADRREVEELLRERLSMVK----LSP-RVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
               + E E L+R+ + ++K      P  + D YP +LSGG  QR  + ++ LL P LLI
Sbjct: 124 REGKKAEEESLMRDVIEVLKDLRLPDPYSIIDRYPHQLSGGQVQRIVISMALLLKPKLLI 183

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE TSALDVT Q  V+ L     +E I  SI+F+THD++L   ++DR++VMYAG+++E 
Sbjct: 184 ADEPTSALDVTIQAQVVNLFKQLNKE-INTSILFITHDISLAYVVSDRIVVMYAGRIMED 242

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFA 293
           G +EEVL++P HPYTQ L+ S+P      K ++L+ IPG P S    P GC+F  RC   
Sbjct: 243 GKVEEVLKSPMHPYTQGLVASIPSGD---KNQKLTAIPGNPPSFFALPTGCKFSNRCSKV 299

Query: 294 MEDCRDVEPKLVK 306
            + CR  EP +++
Sbjct: 300 FDICRKKEPSIIE 312


>emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport system, ATP-binding
           protein appD [Thermoplasma acidophilum]
           Length = 298
           
 Score =  219 bits (551), Expect = 5e-56
 Identities = 117/291 (40%), Positives = 176/291 (60%), Gaps = 5/291 (1%)

Query: 26  VSFEVGEGEVFGVAGESGCGKSTLVHSLILR-KPPMEYKGGSAIFKGRDLMSLPRDELRK 84
           ++  V +G + G+AGESG GKSTL  ++    K P E   G      +D++ +  ++LR+
Sbjct: 1   MNLRVRKGIILGIAGESGSGKSTLAQAIYRSLKYPGEITSGQVYLDDQDILRINGEDLRR 60

Query: 85  IQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSMVKLSPRVA 144
           I+ +  S IPQ AMNALNP KRI+   +DL   HG    +  E+ ++  + MV+L   V 
Sbjct: 61  IRATRFSFIPQAAMNALNPVKRIRYQFYDLLIAHGLQPEKN-EDRIQAAIKMVRLRENVL 119

Query: 145 DMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKS 204
           + +P ELSGGMRQR  + +S LL PDL+I DE T+ LDV  Q  +++ L    ++  + +
Sbjct: 120 ESFPHELSGGMRQRVVIAMSLLLRPDLVILDEPTTGLDVLVQHEILKDLKAIQRQSGL-T 178

Query: 205 IIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKR 264
           +IF+THDL++L +IAD + ++YAG++VE GP +E+L +P HPY  LLL S+PR+G   KR
Sbjct: 179 MIFITHDLSILYEIADEIAMIYAGEIVEFGPRDEMLNDPQHPYNFLLLRSMPRIGA--KR 236

Query: 265 ERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAAC 315
                + G P +      GC+FYTRCPF++  C    P+L      H+  C
Sbjct: 237 GTGYRLIGNPGNFREDFNGCQFYTRCPFSVPQCVSKHPELTSDDGRHFRRC 287


>dbj|BAB03747.1| (AP001507) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 347
           
 Score =  218 bits (550), Expect = 6e-56
 Identities = 131/308 (42%), Positives = 187/308 (60%), Gaps = 10/308 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKS-TLVHSLILRKPPME 61
           +L+VR+LR  + T    V+AVDGV+F V +G+  G+ GESG GKS T +  L L + P +
Sbjct: 12  ILEVRDLRTSFFTEAFEVKAVDGVTFSVPKGKTLGIVGESGSGKSITSLSILKLIQEPGK 71

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
             GG   FKG +L++     +RKI+ +E+S+I Q  M +LNP   +   + +  R H   
Sbjct: 72  VVGGEINFKGENLVTKNEAYMRKIRGNEISMIFQEPMTSLNPVYTVGQQISESFRIHEKL 131

Query: 122 DRREVEELLRERLSMVKL----SP-RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            ++E    L+  + M+KL    SP +    YP ELSGGMRQR  + ++   NP+LLIADE
Sbjct: 132 GKKEA---LKRSVDMLKLVGIPSPEKRVHQYPHELSGGMRQRVMIAMALACNPELLIADE 188

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ALDVT Q  ++EL+   +Q+ +  SII +THDL ++ +  D V VMY GKVVE   +
Sbjct: 189 PTTALDVTIQAQILELMKD-LQDRLGMSIIMITHDLGVVAETCDYVAVMYCGKVVEYADV 247

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           + + +NP HPYT  LLNSLPR  +  + E LS I G   S  + P+GCRF  RCPFA + 
Sbjct: 248 KTLFKNPRHPYTVGLLNSLPRHDIDLEDEELSVIKGNVPSPADMPEGCRFAPRCPFASDI 307

Query: 297 CRDVEPKL 304
           C++  P L
Sbjct: 308 CKERLPDL 315


>dbj|BAB03746.1| (AP001507) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 338
           
 Score =  218 bits (550), Expect = 6e-56
 Identities = 131/329 (39%), Positives = 190/329 (56%), Gaps = 22/329 (6%)

Query: 3   LLDVRNLRVYY--------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           LL V  L+ Y+        RT V +V+AVD VSF + EGE   + GESGCGKST   +++
Sbjct: 5   LLKVEGLKQYFPIKGGILGRT-VNHVKAVDDVSFTIYEGETVSIVGESGCGKSTTGRAIL 63

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
               P +   G   F+G DL+SL + E+RK +  +L II Q    ++NP + I+ ++ + 
Sbjct: 64  RLDEPTD---GKIEFQGEDLLSLNKREMRK-KRKDLQIIFQDPYASINPRQTIRQVLEEA 119

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
                   R +  E +RE +  V L    AD +P E SGG RQR  +  +  +NP L++ 
Sbjct: 120 MEIQKVVPRDKRGERIRELMDTVGLGSHQADRFPHEFSGGQRQRIGIARALSVNPKLIVC 179

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE  SALDV+ Q  VI LL    +E    + +F++HDL ++R I+DRV+VMY G++VEI 
Sbjct: 180 DEAVSALDVSIQAQVINLLKRLQRE-FKLTYLFISHDLGVVRHISDRVIVMYLGRIVEIA 238

Query: 235 PMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAM 294
               + ENP HPYT+ LL+++P      K+ER+  + G   S ++PP GCRF+TRCPFA 
Sbjct: 239 DKTSLFENPQHPYTKALLSAIPVPDPEKKKERII-LKGDVPSPIDPPNGCRFHTRCPFAT 297

Query: 295 EDCRDVEPKL-----VKVGRDHYAACHLL 318
           + CR   P+L     +K G  H AACH +
Sbjct: 298 DKCRTETPELRTADYMKDG--HLAACHYM 324


>gb|AAK41519.1| Oligo/dipeptide transport, ATP binding protein . (dppD-2)
           [Sulfolobus solfataricus]
           Length = 323
           
 Score =  217 bits (547), Expect = 1e-55
 Identities = 120/322 (37%), Positives = 194/322 (59%), Gaps = 9/322 (2%)

Query: 4   LDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYK 63
           L VR+L + Y+   G +RA++ V F++ +G+  GV GE+G GK+T+ ++++   P     
Sbjct: 3   LQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENAEY 62

Query: 64  GGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRI-KDIVWDLAREHGYA 121
            GS  F  +D++ + ++  RK I++ ++SIIPQY+MNA NP KR+ + +V  +       
Sbjct: 63  SGSIFFNNKDILKMDQETYRKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMMENDSNI 122

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
           D  +  E +    + + L P +    P ELSGG RQR  +  + LL+P+L+IADE T+AL
Sbjct: 123 DTSKASERIFYLFNQLSLPPEIYKKLPDELSGGQRQRVVIASALLLDPELVIADEPTTAL 182

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLE 241
           DV  Q  VI L+   + +   K++I++THD+A++  +A +V+ +YAG+++E G   ++ +
Sbjct: 183 DVINQARVISLIKREIVDK-QKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIFK 241

Query: 242 NPAHPYTQLLLNSLP--RMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRD 299
            P HPY++ LL+S+P  R G   K +++  IPG P  L    KGC F  RC  A + C+ 
Sbjct: 242 EPLHPYSKGLLSSVPDIRFG---KVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKDICKV 298

Query: 300 VEPKLVKVGRDHYAACHLLGGE 321
            +PKL  V    Y ACHL+GGE
Sbjct: 299 EKPKLRYVD-GRYVACHLVGGE 319


>dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 329
           
 Score =  217 bits (547), Expect = 1e-55
 Identities = 120/319 (37%), Positives = 188/319 (58%), Gaps = 7/319 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           +L++  LR ++ T  G V AVDGVS  + +GE+ G+ GESGCGKS    S+  ++  PP 
Sbjct: 5   VLELDKLRTHFFTDQGEVPAVDGVSLRLHQGEIIGIVGESGCGKSVTSLSIMQLVPNPPG 64

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           +   G   FKG DL+ +    +++I+ +++++I Q  M +LNP   I + + +  R H  
Sbjct: 65  KIMSGHVYFKGEDLVQVSPKRMKQIRGNDIAMIFQEPMTSLNPLFTIGNQLIEAIRNHRK 124

Query: 121 ADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             ++E  +     L  V +  +  +A  YP +LSGGMRQR  + ++   +P +LIADE T
Sbjct: 125 MTKQEARKQAVTMLERVGIPRADEIASEYPHQLSGGMRQRVMIAMAMCCDPKVLIADEPT 184

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  +++L+ H + E    +I+ +THDL ++ ++ +RV+VMYAG+VVE G +  
Sbjct: 185 TALDVTIQAQILDLMRH-LNEAHDTAILLITHDLGVVAELCNRVVVMYAGQVVEEGDVRM 243

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +L++P HPYT+ LL SLP+  +H + +RL  IPG          GCRF  RC  A E C+
Sbjct: 244 ILKHPKHPYTKGLLKSLPK--IHEQSKRLYSIPGVVPKPGTVGHGCRFAARCEVAFERCK 301

Query: 299 DVEPKLVKVGRDHYAACHL 317
              P+L +V   H   C L
Sbjct: 302 TTAPQLQQVATGHQCRCFL 320


>gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [Halobacterium sp.
           NRC-1]
           Length = 363
           
 Score =  215 bits (541), Expect = 7e-55
 Identities = 125/322 (38%), Positives = 184/322 (56%), Gaps = 9/322 (2%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPP 59
           ++L +RNL+  +RT   ++RAVDG+S  +  GE  G+ GESG GKS    S+  ++  P 
Sbjct: 17  SILSIRNLQTVFRTDHEHIRAVDGISLSISPGETLGIVGESGSGKSVTARSIMGLVDAPG 76

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                 S +F G +L  L  D+ ++++ S + +I Q  + +LNP   + + + +  R + 
Sbjct: 77  EVLPESSIVFDGTELTELSADQYQEVRGSGVGMIFQDPLKSLNPVYTVGNQIREALRINR 136

Query: 120 YADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
               +E  ++  + L  V +    R  D YP E SGGMRQRA + +    +PD+LI DE 
Sbjct: 137 GITGQEATDVAIDLLEDVAIPDPERRLDEYPNEFSGGMRQRAVIAMMLACDPDVLICDEP 196

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDVT Q  ++ELL     E  + +I+F+THD+ ++ +I+DRV VMYAG+ VE  P+E
Sbjct: 197 TTALDVTIQAQIVELLQDIQAERDL-AILFITHDMGVIAEISDRVNVMYAGEFVEKAPVE 255

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
           E+  NP HPYTQ LL+++P  G     ERL+ I G   +   P   CRF  RCP A EDC
Sbjct: 256 ELFANPKHPYTQGLLDAIP--GTSVDDERLNTIEGDVPTPNQPATDCRFAPRCPKAFEDC 313

Query: 298 RDVEPKLVKVG--RDHYAACHL 317
            +V P  V V    DH  AC L
Sbjct: 314 TEVHPTHVSVSDTHDHSTACLL 335


>pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC1094 [imported]
           - Vibrio cholerae (group O1 strain N16961)
           >gi|9655563|gb|AAF94253.1| (AE004190) oligopeptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 324
           
 Score =  214 bits (540), Expect = 9e-55
 Identities = 121/317 (38%), Positives = 187/317 (58%), Gaps = 5/317 (1%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M+LLDV++LRV + T  G V AV+ ++F + +GE  G+ GESG GKS  V +++      
Sbjct: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               GSA F+G+++++LP  EL K++  ++++I Q  M +LNP  ++ D + ++   H  
Sbjct: 62  GKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKG 121

Query: 121 ADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             + E  E     L  VK+  + +   MYP E SGGMRQR  + ++ L  P LLIADE T
Sbjct: 122 MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 181

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++ELL+   +E    +II +THDL ++    D+V+VMYAG+ +E G + +
Sbjct: 182 TALDVTVQAQIMELLNELKRE-FNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  NP+HPY + LL+++PR+    + E L  IPG P +LL  P GC +  RC    + C+
Sbjct: 241 IFYNPSHPYAEGLLSAIPRLDT--EGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCK 298

Query: 299 DVEPKLVKVGRDHYAAC 315
              P L+  G     AC
Sbjct: 299 REAPILLPFGNSRQRAC 315


>sp|P04285|OPPD_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|47805|emb|CAA29042.1| (X05491) Opp D (AA1-335)
           [Salmonella typhimurium]
           Length = 335
           
 Score =  213 bits (537), Expect = 2e-54
 Identities = 123/302 (40%), Positives = 177/302 (57%), Gaps = 5/302 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL+V +LRV + TP G V AV+ ++F +  GE  G+ GESG GKS    +L+        
Sbjct: 17  LLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGR 76

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
            GGSA F GR++++LP  EL  ++  ++S+I Q  M +LNP  R+ + + ++   H    
Sbjct: 77  IGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMS 136

Query: 123 RREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           + E  E     L  VK+  + +   MYP E SGGMRQR  + ++ L  P LLIADE T+A
Sbjct: 137 KAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 196

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVT Q  ++ LL+   +E    +II +THDL ++  I D+V+VMYAG+ +E G   +V 
Sbjct: 197 LDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVF 255

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
             P HPY+  LLN++PR+    +   +  IPG P +LL  PKGC F  RCP AME C + 
Sbjct: 256 YQPVHPYSIGLLNAVPRL--DSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNA 313

Query: 301 EP 302
            P
Sbjct: 314 PP 315


>pir||A72216 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4982328|gb|AAD36815.1|AE001813_7 (AE001813)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 328
           
 Score =  213 bits (536), Expect = 3e-54
 Identities = 116/317 (36%), Positives = 186/317 (58%), Gaps = 7/317 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL   +L+ Y+      ++AVDG+S E+ EGE  G+ GESGCGKSTL  +++    P   
Sbjct: 13  LLQTVDLKKYFPQGKRILKAVDGISIEIKEGETLGLVGESGCGKSTLGRTILKLLRP--- 69

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
            GG   F+G+D+ +L   E++  +  ++ II Q  + +LNP   +  I+ D    H    
Sbjct: 70  DGGKIFFEGKDITNLNDKEMKPYR-KKMQIIFQDPLGSLNPQMTVGRIIEDPLIIHKIGT 128

Query: 123 RREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALD 182
           ++E  + + E L MV +     + +P E SGG +QR  +  +  LNP  ++ DE  SALD
Sbjct: 129 KKERRKRVEELLDMVGIGREFINSFPHEFSGGQQQRIGIARALALNPKFIVCDEPVSALD 188

Query: 183 VTTQRVVIELLHHFMQE-GIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLE 241
           V+ Q  +I+LL    Q+ GI  S +F+ H+LA++  I+ +V VMY GK+VE G ++++  
Sbjct: 189 VSIQAQIIDLLEEIQQKMGI--SYLFIAHNLAVVEHISHKVAVMYLGKIVEYGDVDKIFL 246

Query: 242 NPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVE 301
           NP HPYT+ LL S+P++    +++R   + G   S ++ PKGCRF TRC      C + E
Sbjct: 247 NPIHPYTRALLKSVPKIPWDGQKQRFYSLKGELPSPIDLPKGCRFQTRCTEKKAICFEKE 306

Query: 302 PKLVKVGRDHYAACHLL 318
           P+L +V ++H+ +CHL+
Sbjct: 307 PELTEVEKNHFVSCHLV 323


>pir||G75380 peptide ABC transporter, ATP-binding protein - Deinococcus
           radiodurans (strain R1)
           >gi|6459330|gb|AAF11129.1|AE002000_5 (AE002000) peptide
           ABC transporter, ATP-binding protein [Deinococcus
           radiodurans]
           Length = 346
           
 Score =  210 bits (530), Expect = 1e-53
 Identities = 120/320 (37%), Positives = 183/320 (56%), Gaps = 13/320 (4%)

Query: 3   LLDVRNLRVYY-------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           LL+V NL+ Y+          V  V+AV+ ++F VG+GEV G+ GESG GK+T   +L+ 
Sbjct: 27  LLEVNNLQKYFPIRGGLMSRVVANVKAVNDITFRVGKGEVVGLIGESGSGKTTAGRALLR 86

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
              P    GG  IF G D+  L + ++R  +  E+ II Q    +LNP   + DI+ +  
Sbjct: 87  LIEPT---GGQVIFNGTDITKLGKSQMRDYR-REMQIIFQDPFASLNPRMTVSDILGEAM 142

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
           + H     +   + + E L  V L P     YP E SGG RQR  +  +  ++P  ++AD
Sbjct: 143 QIHNLHPGKARVDRIAELLQRVGLRPEHMGRYPHEFSGGQRQRIGIARALAVDPSFIVAD 202

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E  SALDV+ Q  V+ L+   +QE +  +++F+ HDL ++  I DR++VMY G+++EI P
Sbjct: 203 EPVSALDVSIQAQVVNLIQD-LQEELGLTVLFIAHDLHVVEYICDRMIVMYLGRIMEIAP 261

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAME 295
             E+  NP HPYT+ LL++ P      KR+R+  + G   S +NPP GC F TRC +A+ 
Sbjct: 262 SRELNRNPKHPYTEALLSASPVPDPTIKRQRII-LEGDIPSPINPPSGCVFRTRCRYAIA 320

Query: 296 DCRDVEPKLVKVGRDHYAAC 315
           DC ++ P+L +V  DH+ AC
Sbjct: 321 DCANIVPELREVSPDHFKAC 340


>dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [Ochrobactrum
           anthropi]
           Length = 335
           
 Score =  210 bits (530), Expect = 1e-53
 Identities = 119/303 (39%), Positives = 180/303 (59%), Gaps = 12/303 (3%)

Query: 14  RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRD 73
           R P   VRAVDGVS  V  GE  G+ GESG GKST+  +++    P+    G+  F GR 
Sbjct: 28  RRPASAVRAVDGVSLSVQAGETLGLVGESGSGKSTIGRAILGLNEPLS---GTIHFDGRP 84

Query: 74  LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRER 133
             S  R +LR+     + ++ Q   ++LNP  +I D + ++ R H    +++V+  +R  
Sbjct: 85  THS--RRDLRR----RMQMVFQDPYSSLNPRLKIGDAIGEVLRFHSIVPKQDVDREVRRL 138

Query: 134 LSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELL 193
           LS+V LS  +A+  P E+SGG RQRA +  +  L PD L+ DE  +ALDV+ Q  ++ LL
Sbjct: 139 LSLVGLSAAMAERRPREMSGGQRQRAGIARALALRPDFLVLDEPVAALDVSIQAQILNLL 198

Query: 194 HHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLN 253
               QE +  +++F+ H L ++R ++DR+ V+Y GK++E+GP   V E+  HPYT+ LL+
Sbjct: 199 TDLRQE-LGLTMLFIAHGLGVVRHMSDRIAVLYLGKIMEVGPAHAVFESSRHPYTKALLS 257

Query: 254 SLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYA 313
           ++P + +  KR+R     G   S LN P GCRF TRCP A + C+  +P  V VG DH++
Sbjct: 258 AVPEINL-VKRQRPPVTQGDVPSPLNVPSGCRFRTRCPVAQDICK-TQPPEVPVGPDHFS 315

Query: 314 ACH 316
            CH
Sbjct: 316 RCH 318


>dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 322
           
 Score =  210 bits (530), Expect = 1e-53
 Identities = 125/322 (38%), Positives = 186/322 (56%), Gaps = 13/322 (4%)

Query: 3   LLDVRNLRV-------YYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           LL+V+NL         ++   VG VRAVD +SF V EGEV G+ GESGCGKST     IL
Sbjct: 5   LLEVKNLTKSFDINGGFFSRKVGEVRAVDNLSFSVYEGEVLGIVGESGCGKST-TGKAIL 63

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
           R   +E   G   F G ++ +L   ++RK +  ++ II Q    +LNP   I+ I+ +  
Sbjct: 64  RL--IEPSSGEVYFAGTEITALSEGDMRK-RRRDMQIIFQDPYASLNPRHTIEKIIREPL 120

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
             H    ++E  E + E L  V LS   A  YP + SGG RQR  +  +  ++P L+I D
Sbjct: 121 IVHQIGTKKEQLERVEELLETVGLSSDHATRYPHQFSGGQRQRIGIARALAVHPKLVICD 180

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E  SALDV+ Q  ++ L+   ++E    + IF+ HDL++++ I+DRV VMY G++VE+  
Sbjct: 181 EPVSALDVSVQSQILNLMAD-LKETFALTYIFIAHDLSVVKHISDRVAVMYLGRMVEMAT 239

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAME 295
            +++ ENP HPYT+ LL+++P       +E++  + G   S  NPP+GC F+TRCP  M+
Sbjct: 240 KDQLFENPKHPYTRALLSAVPVPDPDAAKEKIL-LKGDVPSPSNPPEGCAFHTRCPDCMD 298

Query: 296 DCRDVEPKLVKVGRDHYAACHL 317
            C+   P L +  + HY ACHL
Sbjct: 299 VCKIKRPSLHEKEKGHYVACHL 320


>emb|CAC11410.1| (AL445063) probable sporulation protein (spo0KD) [Thermoplasma
           acidophilum]
           Length = 321
           
 Score =  210 bits (530), Expect = 1e-53
 Identities = 121/311 (38%), Positives = 181/311 (57%), Gaps = 10/311 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL +++L V+Y T  G  + +D ++ ++ +GE+  + GES  GKSTL   +    PP+  
Sbjct: 2   LLSIKHLNVWYNTVAGKYKVIDDLNLDIDQGELVSLVGESASGKSTLGQVISRMLPPVGI 61

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD-LAREHGYA 121
             G  +  G D++ L   E+ KI+ + + +I Q  +N+LNP KRI++ + + LA  +   
Sbjct: 62  TSGEVVLDGVDVLKLSEKEMTKIRGTTVFMIFQNPLNSLNPVKRIEEQLMEALAIRNSRM 121

Query: 122 DRREVEELLRERLSMVKLSPRVAD------MYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
           + +   E  R+ +     S R+ D       YP ELSGG  QR  + ++ LL P LLIAD
Sbjct: 122 NIQMTFEEARKEVIKALESLRLPDPEKILIRYPHELSGGQVQRVVICMALLLRPKLLIAD 181

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E T+ALDVT Q  V++LL   +      +IIF+THD+ L   ++DR++V YAG+V+E G 
Sbjct: 182 EPTTALDVTIQAQVVKLLKD-LNRDTKMTIIFITHDVGLAYVLSDRMLVFYAGRVMEQGQ 240

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAME 295
             E+++NP HPYT  LL S+P    H    +L  IPGYP S L+ PKGC+F  RC FA E
Sbjct: 241 TVEIVKNPLHPYTSGLLASIPSSPKH--SGKLYSIPGYPPSYLSLPKGCKFAPRCRFAFE 298

Query: 296 DCRDVEPKLVK 306
            C + EP  +K
Sbjct: 299 RCFEEEPSYIK 309


>gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dppF-3) [Sulfolobus
           solfataricus]
           Length = 323
           
 Score =  210 bits (529), Expect = 2e-53
 Identities = 124/295 (42%), Positives = 176/295 (59%), Gaps = 20/295 (6%)

Query: 14  RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRD 73
           R P  YVRA+D VS E+ +GEV GV GESG GK+TL   L   + P    GG+ IF G +
Sbjct: 29  REPPIYVRALDNVSVEIRKGEVLGVVGESGSGKTTLGKVLATLEKPT---GGNLIFMGME 85

Query: 74  LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRER 133
           +     + +RK     + ++ Q  M ++NP  ++KDIV +  +E       + EE +++ 
Sbjct: 86  VNDRNINHVRK----HIHMVFQNPMTSINPRMKVKDIVREAMKE-------KREERVKKL 134

Query: 134 LSMVKLSPR-VADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIEL 192
           L  V L    V D YP ELSGG  QR  +  +    PD LI DE TSALD + Q  ++ L
Sbjct: 135 LEEVGLDYNYVKDKYPRELSGGQTQRVAIARALAKEPDFLILDEPTSALDASVQAQILNL 194

Query: 193 LHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLL 252
           L    +E  + + +F+TH++A+ R I+DRV++MYAGK+VE G  +EV+  P HPYTQ LL
Sbjct: 195 LVDLQKERKL-TYLFITHNIAVARYISDRVIIMYAGKIVEEGNTKEVISEPMHPYTQSLL 253

Query: 253 NSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKV 307
           +S+P +G    ++ L    G   SL+NPP GCRF  RCPFAM  C++ EP LV++
Sbjct: 254 SSVPELG----KKELKPPSGEVPSLINPPSGCRFNPRCPFAMSVCKEKEPPLVEI 304


>pir||G75202 dipeptide abc transporter, dipeptide-binding protein PAB0095 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5457579|emb|CAB49070.1| (AJ248283) dipeptide ABC
           transporter, dipeptide-binding protein [Pyrococcus
           abyssi]
           Length = 345
           
 Score =  210 bits (528), Expect = 2e-53
 Identities = 122/318 (38%), Positives = 181/318 (56%), Gaps = 14/318 (4%)

Query: 8   NLRVYYRTPVG-------YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           NL+ Y+    G       YV AVDG+S  + +GE FG+AGESGCGKST    L+    P 
Sbjct: 11  NLKKYFPVRGGLFKQKNLYVHAVDGISINIRKGETFGLAGESGCGKSTFGRLLLRLIEPT 70

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E   GS  F G D+  L +DE+RK++   + I+ Q   ++LNP   I D +      H  
Sbjct: 71  E---GSIYFDGIDITKLDKDEMRKLR-RRMGIVFQDPKSSLNPRMTIYDTLKRPLEIHRL 126

Query: 121 ADRREVE-ELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
           A+  E + + + E L  V L       YP ELSGG  QR ++  + + NPD ++ DE TS
Sbjct: 127 AESEEEKYDKIVEILEAVGLGEEHLSRYPHELSGGQLQRVSIARAIITNPDFVVLDEPTS 186

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALD++ Q  ++ LL + +Q     + +F++HD+++L+ ++DR+ +MY GKVVEI  +++ 
Sbjct: 187 ALDISVQAQILNLLVN-LQRKFNLTYLFISHDISVLQYMSDRIGIMYLGKVVEILSIDDF 245

Query: 240 LENPA-HPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
            +    HPYT  LL S P +    +  R   + G   S +N P GCRF+ RCPF  + C+
Sbjct: 246 RKGEIYHPYTAYLLLSTPALHPSKRTSRKVILTGEVPSPINVPPGCRFHVRCPFVTQKCK 305

Query: 299 DVEPKLVKVGRDHYAACH 316
           D EP LV++ +DHY ACH
Sbjct: 306 DEEPPLVEIKKDHYVACH 323


>pir||QREBOT oligopeptide transport protein oppD - Salmonella typhimurium
           Length = 335
           
 Score =  208 bits (524), Expect = 7e-53
 Identities = 123/302 (40%), Positives = 175/302 (57%), Gaps = 5/302 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL+V +LRV + TP G V AV+ ++F +  GE  G+ GESG GKS     L+        
Sbjct: 17  LLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQSRLRLMGLLATNGR 76

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
            GGSA F GR++++LP  EL   +  ++S+I Q  M +LNP  R+ + + ++   H    
Sbjct: 77  IGGSATFNGREILNLPERELNTRRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMS 136

Query: 123 RREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           + E  E     L  VK+  + +   MYP E SGGMRQR  + ++ L  P LLIADE T+A
Sbjct: 137 KAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 196

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDVT Q  ++ LL+   +E    +II +THDL ++  I D+V+VMYAG+ +E G   +V 
Sbjct: 197 LDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVF 255

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
             P HPY+  LLN++PR+    +   +  IPG P +LL  PKGC F  RCP AME C + 
Sbjct: 256 YQPVHPYSIGLLNAVPRL--DSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNA 313

Query: 301 EP 302
            P
Sbjct: 314 PP 315


>pir||F71163 probable oligopeptide transport ATP-binding protein AppF -
           Pyrococcus horikoshii >gi|3256912|dbj|BAA29595.1|
           (AP000002) 321aa long hypothetical oligopeptide
           transport ATP-binding protein AppF [Pyrococcus
           horikoshii]
           Length = 321
           
 Score =  208 bits (523), Expect = 9e-53
 Identities = 123/305 (40%), Positives = 185/305 (60%), Gaps = 13/305 (4%)

Query: 18  GY-VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMS 76
           GY VRAVD VSFEVGEGE+  + GESG GK+T +  LILR   ++   G  +F+G D+ S
Sbjct: 21  GYEVRAVDDVSFEVGEGEIVSLIGESGSGKTT-IGKLILRL--LKPTSGRILFRGEDIWS 77

Query: 77  LPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH---GYADRREVEELLRER 133
             R++LR+  Y  +  + Q    + NP  ++ D V+DL   +   G A   E EEL++  
Sbjct: 78  FDREKLRRYYYKNVQAVFQDPFASFNPLHKV-DRVFDLVFRNFLRGVAPG-EREELIKRS 135

Query: 134 LSMVKLSP-RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIEL 192
           L  V L+P  V   YP +LSGG  QR  +  + L+ P LLIADE  S LD +T+  ++ L
Sbjct: 136 LESVGLNPGEVLGKYPHQLSGGQLQRILIARALLVEPSLLIADEAVSMLDASTRIDILNL 195

Query: 193 LHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLL 252
           L  F ++    S+IF+THDLAL   I+D++++MY G++VE G  E V  NP HPYT++LL
Sbjct: 196 LGEF-RDKFGTSVIFITHDLALGYYISDKIVIMYRGRIVEWGDAERVFGNPLHPYTRMLL 254

Query: 253 NSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHY 312
            S+P + V ++ + +   P      +   KGCRF  RCP+A ++C +  P+ +++ ++H+
Sbjct: 255 ESVPDLSVRWEFKGIE--PEREEERVYEIKGCRFAPRCPYARKECYEKPPQTIEIEKNHH 312

Query: 313 AACHL 317
            AC+L
Sbjct: 313 VACYL 317


>gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF)
           [Archaeoglobus fulgidus] >gi|7442541|pir||B69471
           dipeptide transport ATP-binding protein dppF -
           Archaeoglobus fulgidus >gi|2648778|gb|AAB89479.1|
           (AE000980) dipeptide ABC transporter, ATP-binding
           protein (dppF) [Archaeoglobus fulgidus]
           Length = 323
           
 Score =  207 bits (522), Expect = 1e-52
 Identities = 120/326 (36%), Positives = 183/326 (55%), Gaps = 22/326 (6%)

Query: 3   LLDVRNLRVYYRTPVG-----------YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVH 51
           +L V NL+ Y+                +VRAVDGVSFE+ +GEV  + GESGCGK+T   
Sbjct: 1   MLRVENLKKYFPVQKSVLEVLLSGRRDFVRAVDGVSFEMKQGEVLSLVGESGCGKTTTGR 60

Query: 52  SLILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIV 111
            ++  + P     G   FK R++ SL  +E R+++   + ++ Q    +LNP  +I + +
Sbjct: 61  IIVGLERPTS---GKIYFKDREITSLSEEEQRRMK-RHIQMVFQDPYASLNPRMKIGEHL 116

Query: 112 WDLAREHGYADRREVEELLRERLSMVKL-SPRVADMYPVELSGGMRQRATMVVSTLLNPD 170
            +    HG A+  E  E+    L  V L   +  +  P +LSGG RQR  +  + +L PD
Sbjct: 117 VESLTIHGIAENDEAREMAMSMLDRVGLPGEQFFNRMPYQLSGGQRQRVAIARAMILKPD 176

Query: 171 LLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
            ++ADE  S +DV+ +  +++LL  F  E  + S++F+THDL++ R + DR+ VMY GK+
Sbjct: 177 FVVADEPVSMIDVSLRAAILDLLMSFRDEYNL-SMLFITHDLSVARIVGDRIAVMYLGKI 235

Query: 231 VEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRC 290
           +EIG   EV+ NP HPYT  LL+S+P      ++  + G    PI +   P GCR++ RC
Sbjct: 236 MEIGKTREVIHNPRHPYTAALLSSVPSFVKKGRKVEIIGDIANPIDI---PSGCRYHPRC 292

Query: 291 PFAMEDCRDVEPKLVKVGRDHYAACH 316
           PFA E C+  EP+L   G +H  ACH
Sbjct: 293 PFAREKCKKEEPEL--EGGEHSFACH 316


>pir||F72617 probable dipeptide transport system ATP-binding protein APE1399 -
           Aeropyrum pernix (strain K1) >gi|5105082|dbj|BAA80396.1|
           (AP000061) 333aa long hypothetical dipeptide transport
           system ATP-binding protein [Aeropyrum pernix]
           Length = 333
           
 Score =  207 bits (522), Expect = 1e-52
 Identities = 129/327 (39%), Positives = 186/327 (56%), Gaps = 16/327 (4%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +++V NL+VY+ T  G V+A++ VSF +  GE + + GE+GCGKS    +L  L  PP  
Sbjct: 9   IIEVENLKVYFYTYAGIVKAIEDVSFRICRGETYCLVGETGCGKSVTSRALTRLIYPPGR 68

Query: 62  YKGGSAIF---KGR--DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
              G   +    GR  D+MSL   ELR+I+  E++ I Q    AL+P   I   V +   
Sbjct: 69  IVEGKIYYYPEPGRRVDIMSLDEKELRRIRGEEIAYIFQDPSAALDPLYTIGYQVGETML 128

Query: 117 EHGYADRREVEELLRERLSMVK--LSP---RVADMYPVELSGGMRQRATMVVSTLLNPDL 171
            HG    R + E +R  + ++K  L P   +    YP ELSGGM+QR  + +S    P L
Sbjct: 129 AHGRV--RSLREGVRRAVGVLKTVLMPDPEKRVKSYPHELSGGMKQRGVIGISLSNRPKL 186

Query: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
           LIADE T+ALDVT Q  +++LL    +E  + +++ +TH+L L+ +  DRV VMYAG +V
Sbjct: 187 LIADEPTTALDVTIQAQIMDLLTQLKREHGL-TLLLITHNLGLVAEYCDRVAVMYAGNIV 245

Query: 232 EIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           E  P++E+  NP HPYT+ L+ ++P      K E L  IPG   +L+ PP GCRF+ RCP
Sbjct: 246 EEAPVDELFSNPLHPYTRALIRAVPNPLA--KIENLEHIPGTVPNLITPPPGCRFHPRCP 303

Query: 292 FAMEDCRDVEPKLVKVGRDHYAACHLL 318
            A + C   +P L +    H AAC  L
Sbjct: 304 LAFDRCSREKPLLKEYSPGHKAACWAL 330


>pir||B72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981604|gb|AAD36138.1|AE001766_4 (AE001766)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 341
           
 Score =  207 bits (521), Expect = 2e-52
 Identities = 123/333 (36%), Positives = 186/333 (54%), Gaps = 22/333 (6%)

Query: 1   MALLDVRNLRVYY--------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHS 52
           MALL+V+NL+ Y+        R  VGY++AVDG+SF + EGE  G+ GESGCGK+T    
Sbjct: 1   MALLEVKNLKKYFPIIKRGFRRKVVGYLKAVDGISFHIEEGETLGLVGESGCGKTTTAKL 60

Query: 53  LILRKPPMEYKGGSAIF----KGRDLMSLPRDELRKIQYSE-LSIIPQYAMNALNPTKRI 107
           ++    P E   G  +     +  D+  L   ELR+      L +I Q   ++LNP   +
Sbjct: 61  IMRGIEPTE---GEIVLNMDGEKVDITKLSEKELREKGVRRFLQMIFQDPYSSLNPRMTV 117

Query: 108 KDIVWDLAREHGYAD-RREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTL 166
           +DI+ +    +G    + E++ ++ + L  V L P     YP   SGG RQR  +  +  
Sbjct: 118 RDIIAEPLVVNGVIKGKEEIDAIVSDLLRAVGLRPEYMQRYPHAFSGGQRQRIAIARAIA 177

Query: 167 LNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMY 226
           L P L++ DE TSALDV+ Q  +I LL    +E  + + +F++HDL ++  I +RV VMY
Sbjct: 178 LKPKLVLCDEPTSALDVSVQAQIINLLKDLQKEYNL-TYLFISHDLGVVEHITNRVAVMY 236

Query: 227 AGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRF 286
            G++VE+   EE+  +P HPYT+ LL+++P+     KR++ + + G      NPP GC F
Sbjct: 237 VGRIVELAETEELFSSPKHPYTEALLSAVPKPDPKRKRKK-AQLTGEVPDPSNPPSGCYF 295

Query: 287 YTRCPFAMEDCRDVEPKLVKVGRD---HYAACH 316
           + RCP+A   C++V P L  VG D   H  ACH
Sbjct: 296 HPRCPYAKAICKEVYPDLRNVGTDQNPHLVACH 328


>pir||T45280 probable ABC transporter intracellular ATPase chain bldkD
           [imported] - Streptomyces coelicolor
           >gi|1532204|gb|AAB09557.1| (U68036) putative ABC
           transporter intracellular ATPase subunit BldkD
           [Streptomyces coelicolor A3(2)]
           Length = 353
           
 Score =  206 bits (520), Expect = 2e-52
 Identities = 130/329 (39%), Positives = 190/329 (57%), Gaps = 16/329 (4%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKS-TLVHSLILRKPPM 60
           A L VR+L+V++ T  G V+AVDG+SF++  G+  G+ GESG GKS T +  L L     
Sbjct: 18  AFLSVRDLKVHFSTEGGVVKAVDGLSFDLERGKTLGIVGESGSGKSVTNLAVLGLHDRRR 77

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               GS    G++L      +L K++  ++++I Q A+ AL+P   +   + +   +H  
Sbjct: 78  TAIDGSITLDGQELTDASEKQLEKLRGKKMAMIFQDALTALSPYYTVGRQIAEPFMKHNG 137

Query: 121 ADRREVE----ELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
           A +++      +LL +++ +     RV D YP + SGG+ QRA + ++   NPDLLIADE
Sbjct: 138 ASKKDARCGAIDLL-QKVGIPHPQKRVDD-YPHQFSGGIGQRAMIAMALSCNPDLLIADE 195

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ALDVT Q  +++LL    QE    +II +THDL ++  +AD +MVMYAG+ VE G +
Sbjct: 196 PTTALDVTVQAQILDLLKDLQQE-FASAIIMITHDLGVVGNMADDIMVMYAGRAVERGTV 254

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPF---- 292
            EVL++P HPYT  LL+S+P +      E L  IPG P SL+NPP GC F+ RC F    
Sbjct: 255 REVLKSPQHPYTWGLLSSMPNLTSDVD-EPLMPIPGSPPSLMNPPSGCAFHPRCGFTDLV 313

Query: 293 AMEDCRDVEPKLVKVGRDHYAACHLLGGE 321
           + E C    P L        AACHL G +
Sbjct: 314 SGERCSGERPTL---PHGRAAACHLTGDQ 339


>pir||E75068 dipeptide abc transporter, ATP-binding protein (dppf) PAB1347 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458955|emb|CAB50442.1| (AJ248287) dipeptide ABC
           transporter, ATP-binding protein (dppF) [Pyrococcus
           abyssi]
           Length = 319
           
 Score =  206 bits (518), Expect = 4e-52
 Identities = 126/324 (38%), Positives = 191/324 (58%), Gaps = 13/324 (4%)

Query: 3   LLDVRNLRVYYRTPV--GY-VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP 59
           LL+V+NL   + + +  GY VRAVD V+F + EGE+  + GESG GK+T +  LILR   
Sbjct: 2   LLEVQNLTKIFTSGLIGGYQVRAVDNVTFSIKEGEIVSLVGESGSGKTT-IGKLILRL-- 58

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
           ++   G  +FKG D+ S  +D+L    Y  +  + Q    + NP  ++ D V+DL     
Sbjct: 59  IKPTSGKILFKGEDIWSFDKDKLMNYYYKNVQAVFQDPFASFNPLYKV-DRVFDLVFRTF 117

Query: 120 YADRREVE--ELLRERLSMVKLSPR-VADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
             +  +VE  EL+R  L  V L+PR +   +P +LSGG  QR  +  + L+ P LLIADE
Sbjct: 118 LKNVSDVEKDELVRRALESVGLNPREILGKFPHQLSGGQLQRILIARALLVEPSLLIADE 177

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             S LD +T+  V+ LL  F ++    S+IF+THDLAL   I+D++++MY G +VE G  
Sbjct: 178 AVSMLDASTRIDVLNLLGEF-RDNHGTSVIFITHDLALGYYISDKIIIMYRGSIVEWGDT 236

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           E+V +NP HPYT++LL S+P + V ++ + +   P      +   KGC+F  RC  A + 
Sbjct: 237 EKVFDNPLHPYTKMLLESVPDLNVKWEFKGIE--PEREEGKVWELKGCKFAPRCSLAKDK 294

Query: 297 CRDVEPKLVKVGRDHYAACHLLGG 320
           C  + P+ V+V ++H+ ACHL GG
Sbjct: 295 CWKIRPEPVEVEKNHWVACHLYGG 318


>gb|AAA50595.1| (U08186) ATP-dependent oligopeptide transport protein D [Thermotoga
           maritima]
           Length = 277
           
 Score =  205 bits (515), Expect = 8e-52
 Identities = 108/266 (40%), Positives = 171/266 (63%), Gaps = 10/266 (3%)

Query: 3   LLDVRNLRVYYRTPVG----YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRK 57
           L+  +NL+ YY   +      V+AVD VS ++   E++G+AGESGCGKSTL+ +L+ L  
Sbjct: 4   LISGKNLKAYYVLDLWGSKKVVKAVDNVSLDILPNEIYGIAGESGCGKSTLLKALLALLD 63

Query: 58  PPMEYKGGSAIF--KGR--DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
           PP+    G  ++  +GR  ++  L  + +RK+++S +S IPQ +M+ LNP KR++D   +
Sbjct: 64  PPLRLMDGELLYNIEGRPTNVTLLKSETIRKLRWSFISYIPQGSMHVLNPVKRVRDTFIE 123

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
           +   H     +E  +L  + L  + L  RV +M+P +LSGGMRQR T+ ++T+L P ++ 
Sbjct: 124 ILSSHVKKQTKEFLDLAVQHLKDLGLPERVLNMFPHQLSGGMRQRVTIALATVLKPRVIF 183

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE T+ALDV  QR V++L+   +Q  +  +++ VTHD+ +  QI  R+ +MYAGK+VE 
Sbjct: 184 ADEPTTALDVVAQRAVMQLIRK-IQNDLKNTVVLVTHDMGVHAQITTRMAIMYAGKIVEE 242

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMG 259
           GP  E+ +NP HPYT+ L+ SLP +G
Sbjct: 243 GPTLEIFKNPLHPYTRYLIQSLPAIG 268


>pir||D75142 oligopeptide transport ATP-binding protein appf PAB0631 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458364|emb|CAB49853.1| (AJ248285) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
           Length = 322
           
 Score =  204 bits (514), Expect = 1e-51
 Identities = 125/321 (38%), Positives = 190/321 (58%), Gaps = 13/321 (4%)

Query: 3   LLDVRNLRVYYRTPV--GY-VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP 59
           LL+V+NL   + + +  GY VRAVDGVSF + EGE+  + GESG GK+T +  LILR   
Sbjct: 2   LLEVQNLTKIFTSGLIGGYQVRAVDGVSFTINEGEIVSLVGESGSGKTT-IGKLILRL-- 58

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
           +    G  +F+G+D+M   + EL+   Y ++  + Q    + NP  ++ D V+ +  +  
Sbjct: 59  LTPTSGRILFEGKDIMKFSKKELKTYYYRKVQAVFQDPFASFNPLHQV-DKVFHMIFDSY 117

Query: 120 YAD--RREVEELLRERLSMVKLSP-RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
           + D  R E EE++ + L  V L+P  V   YP +LSGG  QR  +  + LL P LLIADE
Sbjct: 118 FPDLGREEREEMIDKALEEVGLNPSEVRGKYPHQLSGGQLQRILIARALLLKPRLLIADE 177

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             S LD +T+  V+ LL  F ++    S++F+THDLAL   I+D  ++MY G +VE+G  
Sbjct: 178 AVSMLDASTRIDVLNLLGEF-RDKYGTSVLFITHDLALGYYISDSTIIMYRGTIVEMGET 236

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           E+V  NP HPYT++LL S+P + V ++ + +   P      +   KGCR+  RCP A + 
Sbjct: 237 EKVFHNPLHPYTKMLLESVPDLNVKWEFKGIE--PEKEEGKVWKIKGCRYAPRCPKAKDV 294

Query: 297 CRDVEPKLVKVGRDHYAACHL 317
           C  + P L++V ++H+ ACHL
Sbjct: 295 CFKIRPTLIEVEKNHWVACHL 315


>dbj|BAA94702.1| (AB026907) dipeptide transporter DppD homolog [Ochrobactrum
           anthropi]
           Length = 334
           
 Score =  204 bits (513), Expect = 1e-51
 Identities = 121/319 (37%), Positives = 178/319 (54%), Gaps = 9/319 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI--LRKPPM 60
           LL V NL V + TP G V A +GVS ++  GE  G+ GESG GKS L  +L+  L  PP 
Sbjct: 6   LLSVDNLNVTFSTPRGNVVANNGVSLQIAGGETLGIVGESGSGKSVLCRALLGLLPSPPA 65

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH-- 118
             +    +F GR+++SL   E+R ++  E+S++ Q  M++LNP   I D + +  R H  
Sbjct: 66  TIRADRLVFAGRNMLSLTAAEMRAVRGQEISMVFQNPMSSLNPVWPIGDQISEGLRVHRG 125

Query: 119 -GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
            G A  R        R+ +     RV D YP + SGGM QRA + ++ +  P LL+ADE 
Sbjct: 126 IGNAQARSAAIAALRRVGIPSPEIRVDD-YPHQWSGGMAQRAVIAMAMIGEPKLLLADEP 184

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDVT Q  ++ LL    +E  + +I+ V+HD++++ +  D V VMYAG VVE G   
Sbjct: 185 TTALDVTIQDQILSLLMQLQRETGM-AIVLVSHDMSVISETCDNVAVMYAGGVVETGRTT 243

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
           ++   P+HPYT  LLNS+P   +  + ++L+ IPG P  L     GC F+ RC  A  +C
Sbjct: 244 DIFRTPSHPYTAGLLNSIP--PIKGRADKLASIPGQPPDLARLGPGCPFFERCSVASAEC 301

Query: 298 RDVEPKLVKVGRDHYAACH 316
           +     L ++      ACH
Sbjct: 302 QTRPVALKRLASGQQTACH 320


>pir||F75026 oligopeptide transport ATP-binding protein appf. PAB1197 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5459166|emb|CAB50652.1| (AJ248288) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPF. [Pyrococcus abyssi]
           Length = 335
           
 Score =  203 bits (511), Expect = 2e-51
 Identities = 119/334 (35%), Positives = 191/334 (56%), Gaps = 22/334 (6%)

Query: 3   LLDVRNLRVYYRT-----------PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVH 51
           +L V NL+ Y+             P  +VRAVDG+SFEV + +VF + GESGCGK+T   
Sbjct: 5   ILKVENLKKYFPIRRGFLASLRGEPQQFVRAVDGISFEVYKQQVFALVGESGCGKTTTGK 64

Query: 52  SLILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIV 111
            ++    P +   G    +G+D+  L   E  K     + +I Q   +++NP  RI D++
Sbjct: 65  LVVKLLEPTD---GKIYLEGQDVTQLRTKEEIKAYRRRVQMIFQDPFSSMNPRFRIYDVL 121

Query: 112 WDLAREHGYADRR-EVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLN 168
            +    HG  + R E EEL+ + L MVK++P       +P  LSGG RQR  +  + +LN
Sbjct: 122 EEPLLIHGIGETRAEREELIYKALEMVKITPPEEYVGRFPHMLSGGQRQRVAIARALILN 181

Query: 169 PDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAG 228
           P  ++ADE  S LDV+ +  ++EL+   ++E +  + +++THDL+  R  AD + VMY G
Sbjct: 182 PTFIVADEPVSMLDVSIRAEILELMKE-LKEKMGVTYLYITHDLSTARYFADWIAVMYLG 240

Query: 229 KVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIP--GYPISLLNPPKGCRF 286
           ++VE+GP +EV++NP HPYT+ LL ++P   +  +++ +  +P  G   S +N P GCRF
Sbjct: 241 RIVEMGPAKEVIDNPLHPYTRALLAAVPE-PIPERKDVIKELPIKGEVPSAVNIPPGCRF 299

Query: 287 YTRCPFAMED-CRDVEPKLVKVGRDHYAACHLLG 319
           + RC +  +  C   EPKL++   +H+  CH +G
Sbjct: 300 HPRCVYFKKGLCDTKEPKLIEYSHNHWVECHRVG 333


>pir||T35982 probable peptide transport ATP-binding protein - Streptomyces
           coelicolor >gi|4464267|emb|CAB37470.1| (AL035559)
           putative peptide transport ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 398
           
 Score =  203 bits (510), Expect = 3e-51
 Identities = 120/319 (37%), Positives = 172/319 (53%), Gaps = 4/319 (1%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M+LL+VR+L+V Y    G   AV GV   +  GE  GVAGESGCGKSTL  +L+   PP 
Sbjct: 1   MSLLEVRDLKVTYP---GGAAAVRGVDLTLAAGEKLGVAGESGCGKSTLALALLRLLPPG 57

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
              GG  +  G D++++    +R ++++  SI+ Q AM++LN   R+ D + +    H  
Sbjct: 58  ARVGGEILLDGEDVLTMKWGRVRAVRWAGASIVFQGAMHSLNAVHRVGDQIAEPILLHRR 117

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
                      E L  V L    A  YP ELSGG RQR  + ++   +P L++ADE T+A
Sbjct: 118 TTAAGARRRAGELLEQVGLPAARASAYPHELSGGQRQRVMIAMALACDPRLIVADEPTTA 177

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV  Q  ++ L+   + E  V  +I ++HDLA+L    DR+ VMYAG+VVE GP  +V 
Sbjct: 178 LDVMIQAQILRLIEGLVGEQDV-GLIMISHDLAVLADTCDRLAVMYAGRVVEEGPARQVY 236

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           ++  HPY + L  + P +G    R    G+PG P      P GC F+ RCP A++ C   
Sbjct: 237 DDARHPYGRALSEAFPTIGDPASRFAPRGLPGDPPDPAAVPSGCAFHPRCPVALDLCATQ 296

Query: 301 EPKLVKVGRDHYAACHLLG 319
           +  L   G    AAC  +G
Sbjct: 297 DQPLRDAGARRRAACVHVG 315


>gb|AAG20461.1| (AE005118) oligopeptide ABC transporter ATP-binding; AppF
           [Halobacterium sp. NRC-1]
           Length = 440
           
 Score =  202 bits (509), Expect = 4e-51
 Identities = 117/297 (39%), Positives = 172/297 (57%), Gaps = 13/297 (4%)

Query: 2   ALLDVRNLRVYY-------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           +L+ V  L+ +Y       RT VG VRAVDGVSFEV  GE  G+ GESGCGKST+  S++
Sbjct: 15  SLMRVDGLKKHYPITEGVLRTEVGRVRAVDGVSFEVRAGETLGIVGESGCGKSTVAESVL 74

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
               P     GS  F G D+ +     L++ +  E  +I Q   ++ +P     + V + 
Sbjct: 75  RLTDPT---AGSVYFDGEDVTAYDDTALKRFR-REAQMIFQNPDSSFDPRMTTGESVAEP 130

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
            + HG   R    E+ R+ L  V +S   A  YP ELSGG +QR  +  + ++NP L++A
Sbjct: 131 LKIHGVGPRSRRLEIARDLLERVGMSGEDAARYPHELSGGQKQRVALARALVVNPRLIVA 190

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE  SALDV+ Q  V+ LL+    E  +  ++F++HD+ ++R++ DRV VMY G++VE+G
Sbjct: 191 DEPVSALDVSVQAEVLTLLNDIQAEFNL-GVLFISHDMGVVREVCDRVAVMYLGEIVEMG 249

Query: 235 PMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
             E+V  +P HPYT+ LL S+P +GV   R   +G+ G      +PP GC F+TRCP
Sbjct: 250 RTEDVFNDPEHPYTRALLRSIPTVGVE-SRGTDAGLRGEVPPPSDPPTGCNFHTRCP 305


>gb|AAC64255.1| (AF042861) putative OppD [Treponema denticola]
           Length = 330
           
 Score =  202 bits (508), Expect = 5e-51
 Identities = 121/321 (37%), Positives = 187/321 (57%), Gaps = 13/321 (4%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           LL+V+NL  Y+ T  G ++AV GV F +  G+  G+ GESG GKS    S++ L + P +
Sbjct: 5   LLEVKNLHTYFFTNKGTIKAVQGVDFTIEAGKTLGIVGESGSGKSITAFSILNLLEYPGK 64

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G   F G +L++L + E+RKI+ +++S+I Q  M +LNP  RI   + +    H + 
Sbjct: 65  IVQGEINFGGINLVNLGKKEIRKIRGNDISMIFQEPMTSLNPVHRIGRQLSEPLILHQHM 124

Query: 122 DRREVEELLRERLSMVKLS--PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
            ++E      + L  VK+     V   YP +LSGGMRQR  + ++    P LLIADE T+
Sbjct: 125 SKKEAWAAAIDLLREVKIPNPENVVYNYPFQLSGGMRQRVMIAMALACKPRLLIADEPTT 184

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALDVT Q  + +L++   ++    +I+F+THDL  + ++AD V VMY G++VE  P++ +
Sbjct: 185 ALDVTIQAQIFKLMNDLKKKHNT-AIMFITHDLGAIAELADDVAVMYTGEIVERAPVDVI 243

Query: 240 LENP---AHPYTQLLLNSLPRMG--VHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAM 294
            +     +HPY + LL S+P +   V Y  +    +P +P+ L   PKGCRF TRC +A 
Sbjct: 244 FDRQTQFSHPYKEGLLESIPLLDEEVEYLAQIQGSVP-HPLKL---PKGCRFSTRCEYAT 299

Query: 295 EDCRDVEPKLVKVGRDHYAAC 315
           E CR+ +P+LV+V   H   C
Sbjct: 300 EKCRNEKPELVEVEEGHLIRC 320


>dbj|BAB07359.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 340
           
 Score =  202 bits (508), Expect = 5e-51
 Identities = 124/319 (38%), Positives = 183/319 (56%), Gaps = 9/319 (2%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPM 60
           ALL +RNL   ++    +  AVD V+  V + EV  + GESG GKS L ++++ L  P  
Sbjct: 5   ALLQIRNLTTAFQIKDDFYAAVDNVTLNVNKNEVLAIVGESGSGKSALANTIMGLHNPER 64

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G   FKG +L+ LP  +L KI+  +LS+I Q  + ALNP   I + + +    H  
Sbjct: 65  TKIEGEINFKGENLVKLPVSKLNKIRGDKLSMIFQDPLTALNPLMIIGEQIGEALLLHRS 124

Query: 121 ADRREVEELLRERLSMVKLSPR---VADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
             + E ++ + + L++V + PR     + YP ELSGGMRQR  +  +    P+ LIADE 
Sbjct: 125 LTKAERKKKVIDLLNLVGI-PRPESTYEQYPHELSGGMRQRVMIAAAIACEPEFLIADEP 183

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDVT Q  +++L+   ++E I   II +THDL ++ ++ADRV VMYAG++VEI  + 
Sbjct: 184 TTALDVTIQAQILDLIRD-LKEKIHAGIILITHDLGVVAEMADRVAVMYAGQIVEIADVF 242

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLN-PPKGCRFYTRCPFAMED 296
            + E P HPYT+ LLNS+P       +E+L  I G   +L N P KGCRF  R P+  E 
Sbjct: 243 TLFERPLHPYTRSLLNSVP--SESNDQEKLHVIQGIVPALQNLPRKGCRFKDRIPWLSES 300

Query: 297 CRDVEPKLVKVGRDHYAAC 315
             +  P+L +V   H+  C
Sbjct: 301 AHEDHPELHEVEPGHFVRC 319


>sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN Y4TS
           >gi|1486423|emb|CAA92401.1| (Z68203) OppF homologue
           [Rhizobium sp.] >gi|2182649|gb|AAB91872.1| (AE000098)
           Y4tS [Rhizobium sp. NGR234]
           Length = 353
           
 Score =  201 bits (506), Expect = 9e-51
 Identities = 126/325 (38%), Positives = 177/325 (53%), Gaps = 17/325 (5%)

Query: 2   ALLDVRNLRVYY-------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           ALL V +L  +Y       +T V  VRAV+ VSF V  GE   V GESGCGKSTL   L+
Sbjct: 4   ALLKVESLTKHYPIEAGWFKTNVPVVRAVEDVSFTVQAGETLCVVGESGCGKSTLARLLM 63

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
               P     G  + +G D+  L ++ELR  +   + ++ Q   ++LNP      I+ + 
Sbjct: 64  RLIDPTS---GRVLVEGTDIAGLRKNELRAWR-RRMQMVFQDPYSSLNPRLTAGQIITEP 119

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
                   RR+ +EL  + L  V +SP +A  YP E+SGG RQR  +  +  L P L+IA
Sbjct: 120 VENFECLSRRQRQELATDLLRKVGMSPEMASRYPSEMSGGQRQRLGIARALALKPSLIIA 179

Query: 175 DEITSALDVTTQRVVIELLHHFMQE-GIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           DE  SALDV+ Q  ++ LL    QE GI  ++IF++HDLA++  I  RV VMY G++VE+
Sbjct: 180 DEAVSALDVSVQAQILNLLMDLQQETGI--ALIFISHDLAVVEHIGHRVAVMYLGRIVEL 237

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLS-GIPGYPISLLNPPKGCRFYTRCPF 292
            P + +   P HPYT+ L+ + P       R RL   + G   S +NPP GC F+ RCP 
Sbjct: 238 SPRDALFAKPVHPYTEALIAAAPVPDP--ARARLEVPLEGEVPSPVNPPSGCAFHPRCPL 295

Query: 293 AMEDCRDVEPKLVKVGRDHYAACHL 317
           A++ CR   P LV +      ACH+
Sbjct: 296 AVDRCRAEVPPLVPMPDGRAVACHV 320


>sp|P08007|OPPF_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|72454|pir||QREBOF oligopeptide transport protein
           oppF - Salmonella typhimurium >gi|47806|emb|CAA29043.1|
           (X05491) Opp F (AA1-334) [Salmonella typhimurium]
           Length = 334
           
 Score =  200 bits (504), Expect = 2e-50
 Identities = 112/302 (37%), Positives = 178/302 (58%), Gaps = 7/302 (2%)

Query: 5   DVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKG 64
           D++  + ++  P   ++AVDGV+  + EGE  GV GESGCGKST   ++I     ++   
Sbjct: 22  DIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAII---GLVKATD 78

Query: 65  GSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE-HGYADR 123
           G   + G+DL+ +  DE R+++ S++ +I Q  + +LNP   I +I+ +  R  H    R
Sbjct: 79  GKVAWLGKDLLGMKADEWREVR-SDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSR 137

Query: 124 REVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDV 183
           ++V + ++  +  V L P + + YP E SGG  QR  +  + +L P L+I D+  SALDV
Sbjct: 138 QDVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDDAVSALDV 197

Query: 184 TTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENP 243
           + Q  V+ LL    +E +  S+IF+ HDLA+++ I+DRV+VMY G  VE+G  +EV  NP
Sbjct: 198 SIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNP 256

Query: 244 AHPYTQLLLNSLPRMGVHYKR-ERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEP 302
            HPYT+ L++++P      +R +++  + G   S +NPP GC F TRCP A  +C    P
Sbjct: 257 LHPYTKALMSAVPIPDPDLERNKKIQLLEGELPSPINPPSGCVFRTRCPIAGPECAQTRP 316

Query: 303 KL 304
            L
Sbjct: 317 VL 318


>pir||F71211 probable oligopeptide transport ATP-binding protein appF -
           Pyrococcus horikoshii >gi|3258402|dbj|BAA31085.1|
           (AP000007) 335aa long hypothetical oligopeptide
           transport ATP-binding protein appF [Pyrococcus
           horikoshii]
           Length = 335
           
 Score =  200 bits (504), Expect = 2e-50
 Identities = 116/334 (34%), Positives = 193/334 (57%), Gaps = 22/334 (6%)

Query: 3   LLDVRNLRVYYRT-----------PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVH 51
           +L V NL+ Y+             P  +V+AVDGVSFE+ + +VF + GESGCGK+T   
Sbjct: 5   ILKVENLKKYFPVRRGFLSALRGEPQKFVKAVDGVSFEIYKQQVFALVGESGCGKTTTGK 64

Query: 52  SLILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIV 111
            ++    P +   G    +G+D+  L   E  K    ++ +I Q   +++NP  RI D++
Sbjct: 65  LIVKLLEPTD---GKIYLEGQDVTELRTKEEIKAYRRKVQMIFQDPFSSMNPRFRIYDVL 121

Query: 112 WDLAREHGYADRR-EVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLN 168
            +    HG  + R E EEL+ + L MVK++P       +P  LSGG RQR  +  + +LN
Sbjct: 122 EEPLLIHGIGETRAEREELIYKALEMVKITPPEEYVGRFPHMLSGGQRQRVAIARALILN 181

Query: 169 PDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAG 228
           P  ++ADE  S LDV+ +  ++EL+   ++E +  + +++THDL+  R  AD + VMY G
Sbjct: 182 PTFVVADEPVSMLDVSIRAEILELMKE-LKEKMGVTYLYITHDLSTARYFADWIAVMYLG 240

Query: 229 KVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIP--GYPISLLNPPKGCRF 286
           ++VE+GP +E+++NP HPYT+ LL ++P   +  +++ +  +P  G   S +N P GCRF
Sbjct: 241 RIVEMGPAKEIIDNPLHPYTRALLAAVPE-PIPERKDVIKELPIKGEVPSAVNIPSGCRF 299

Query: 287 YTRCPFAMEDCRDV-EPKLVKVGRDHYAACHLLG 319
           + RC +  +   DV +P+L++   +H+  CH +G
Sbjct: 300 HPRCIYFKKGLCDVKQPQLIEYSHNHWVECHRVG 333


>emb|CAC11411.1| (AL445063) oligopeptide transport ATP-binding protein appF related
           protein [Thermoplasma acidophilum]
           Length = 314
           
 Score =  200 bits (504), Expect = 2e-50
 Identities = 122/328 (37%), Positives = 183/328 (55%), Gaps = 32/328 (9%)

Query: 3   LLDVRNLRVYY------------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLV 50
           +  ++N++ YY            + P  YVRA+D VS  + +G V GV GESG GKST+ 
Sbjct: 4   IYSLKNVKKYYLAQKRGLIDALVKVPKIYVRALDDVSISIMDGNVIGVVGESGSGKSTMG 63

Query: 51  HSLILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDI 110
             ++  + P +   G   FKG  +      ++RK    ++ ++ Q    +LNP  ++KDI
Sbjct: 64  KVMVTLETPTD---GELYFKGTRVTKSEYPKIRK----QVDMVFQNPATSLNPKMKVKDI 116

Query: 111 VWDLAREHGYADRREVEELLRERLSMVKLS-PRVADMYPVELSGGMRQRATMVVSTLLNP 169
           V   +   G+ D   ++E++ +    V LS   V D    ELSGG  QR  +  + +  P
Sbjct: 117 V---SEPLGHFDEGAIKEVILK----VGLSYDEVKDKQSRELSGGQVQRVAIARALMKKP 169

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
           +LL+ DE TSALD + Q  V+ LL     E    + IF+TH++ + + I+D ++V+YAGK
Sbjct: 170 ELLVLDEPTSALDESIQAQVLNLLVDLQTE-YKMTYIFITHNILVAKYISDYIVVLYAGK 228

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTR 289
           +VE GP  EVL  P HPYTQLLL+S+P + V   +  +  +P    SL+N P+GCRF  R
Sbjct: 229 IVEYGPTSEVLSKPLHPYTQLLLSSVPTVDVKDVKPPVGDVP----SLINLPQGCRFNPR 284

Query: 290 CPFAMEDCRDVEPKLVKVGRDHYAACHL 317
           CPF ME CR  EP L+  G+++  AC L
Sbjct: 285 CPFVMEKCRKEEPPLISQGQNYQVACWL 312


>sp|P45095|DPPD_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD
           >gi|1074009|pir||F64188 dipeptide transport ATP-binding
           protein dppD - Haemophilus influenzae (strain Rd KW20)
           >gi|972897|gb|AAA95974.1| (U17295) DppD [Haemophilus
           influenzae] >gi|1574112|gb|AAC22838.1| (U32798)
           dipeptide ABC transporter, ATP-binding protein (dppD)
           [Haemophilus influenzae Rd]
           Length = 330
           
 Score =  200 bits (503), Expect = 2e-50
 Identities = 119/319 (37%), Positives = 181/319 (56%), Gaps = 7/319 (2%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           MALLDV+ L V++       +AVD +S++V +GEV G+ GESG GKS    +++ L   P
Sbjct: 1   MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHP 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                 S  F+  DL++L     R++  +++++I Q  M +LNP   +   + +  + H 
Sbjct: 61  GRVSAESLQFENTDLLTLESKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHE 120

Query: 120 YADRREVEELLRERLSMVKLSPRVA--DMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
              ++  ++   E L +V +    +  D+YP +LSGGM QR  + ++    P LLIADE 
Sbjct: 121 GGTKKARKDRTLELLKLVGIPDPESRIDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP 180

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDVT Q  ++ELL   +Q+    S+I +THDLAL+ + A+R++VMYAG++VE G  +
Sbjct: 181 TTALDVTIQAQIMELLLE-LQKKECMSLILITHDLALVAEAAERIIVMYAGQIVEEGTAK 239

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
           ++   P HPYTQ LL SLP       + RL  + G      + P GC    RCP+A E C
Sbjct: 240 DIFREPKHPYTQALLRSLPEFA--EGKSRLESLQGVVPGKYDRPTGCLLNPRCPYATEYC 297

Query: 298 RDVEPKLVKVGRDHYAACH 316
           R VEP+L  +G      CH
Sbjct: 298 RQVEPQLHHIG-SRKVKCH 315


>sp|P77737|OPPF_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|7442535|pir||B64872 oligopeptide transport
           ATP-binding protein oppF - Escherichia coli
           >gi|1742036|dbj|BAA14779.1| (D90763) Oligopeptide
           transport ATP-binding protein OppF. [Escherichia coli]
           >gi|1787500|gb|AAC74329.1| (AE000223) homolog of
           Salmonella ATP-binding protein of oligopeptide ABC
           transport system [Escherichia coli K12]
           Length = 334
           
 Score =  198 bits (497), Expect = 1e-49
 Identities = 117/313 (37%), Positives = 179/313 (56%), Gaps = 16/313 (5%)

Query: 3   LLDVRNLRVYYRT---------PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           LL++ +L+V++           P   ++AVDGV+  + EGE  GV GESGCGKST   ++
Sbjct: 11  LLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAI 70

Query: 54  ILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
           I     ++   G   + G++L+ +  DE R ++ S++ +I Q  + +LNP   I +I+ +
Sbjct: 71  I---GLVKATDGHVAWLGKELLGMKPDEWRAVR-SDIQMIFQDPLASLNPRMTIGEIIAE 126

Query: 114 LARE-HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
             R  H    R+EV E ++  +  V L P + + YP E SGG  QR  +  + +L P L+
Sbjct: 127 PLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLI 186

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           I DE  SALDV+ Q  V+ LL    +E +  S+IF+ HDLA+++ I+DRV+VMY G  VE
Sbjct: 187 ICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 245

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRMGVHY-KRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           +G  +EV  NP HPYT+ L++++P       K + +  + G   S +NPP GC F TRCP
Sbjct: 246 LGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCP 305

Query: 292 FAMEDCRDVEPKL 304
            A  +C    P L
Sbjct: 306 IAGPECAKTRPVL 318


>pir||D72720 probable oligopeptide transport ATP-binding protein oppD APE0301 -
           Aeropyrum pernix (strain K1) >gi|5103940|dbj|BAA79256.1|
           (AP000059) 282aa long hypothetical oligopeptide
           transport ATP-binding protein oppD [Aeropyrum pernix]
           Length = 282
           
 Score =  196 bits (494), Expect = 2e-49
 Identities = 117/286 (40%), Positives = 168/286 (57%), Gaps = 16/286 (5%)

Query: 40  GESGCGKSTLVHSL--ILRKPPMEYKGGSAIFKGR----DLMSLPRDELRKIQYSELSII 93
           GESGCGKSTL  S+  IL    +  KG   +  G     DL+ L  DEL KI+   +S+I
Sbjct: 2   GESGCGKSTLARSIARILPSNAVIEKGSIILNLGSGNTVDLVRLSEDELVKIRGKIVSMI 61

Query: 94  PQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLS--MVKLSPRVADMYPVEL 151
            Q    AL+P  ++K  V D    H   ++R VE++ +E L   M+     + + YP EL
Sbjct: 62  FQDPSAALSPVHKVKKQVTD----HVSGEKRRVEKIAQEILKKLMMPAPHMILEKYPHEL 117

Query: 152 SGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHD 211
           SGGM+QR  +  S +  P ++IADE T+ALDVT Q  ++++L    +E +  +II +TH+
Sbjct: 118 SGGMKQRIVIAASLITRPRIIIADEPTTALDVTVQAQILKMLSRLREE-LETTIILITHN 176

Query: 212 LALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIP 271
           LA+  +IADR+ VMYAG VVE+  +  + E P HPYT+ LL S+P+  V    E +  I 
Sbjct: 177 LAVAAEIADRIAVMYAGHVVEVADVFSLFERPLHPYTKGLLKSIPKPHVD---EEIEPIR 233

Query: 272 GYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAACHL 317
           G P SL +PP GCRF+ RCP+ M+ C  ++P+L +       ACHL
Sbjct: 234 GEPPSLADPPPGCRFHPRCPYVMDVCMRIKPRLEERAPGRLVACHL 279


>pir||F83082 probable ATP-binding component of ABC dipeptide transporter PA4506
           [imported] - Pseudomonas aeruginosa (strain PAO1)
           >gi|9950746|gb|AAG07894.1|AE004864_6 (AE004864) probable
           ATP-binding component of ABC dipeptide transporter
           [Pseudomonas aeruginosa]
           Length = 323
           
 Score =  195 bits (491), Expect = 5e-49
 Identities = 115/320 (35%), Positives = 182/320 (55%), Gaps = 13/320 (4%)

Query: 3   LLDVRNLRVYYRTPVGY------VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           +L  R+L  +Y    G       VRA++GVSFE+  G+   V GESGCGKSTL  +L L 
Sbjct: 4   VLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLI 63

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
           + P     GS    G+++    +D+ R+++  ++ ++ Q    +LNP ++I D + +   
Sbjct: 64  EEPTS---GSLKIAGQEVKGASKDQRRQLR-RDVQMVFQNPYASLNPRQKIGDQLAEPLL 119

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            +    R E  E +++ +  V L P     YP   SGG RQR  +  + +L P +L+ADE
Sbjct: 120 INTALSREERREKVQQMMRQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADE 179

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            TSALDV+ Q  V+ L     Q+    + +F++H+LA++R +AD V+VMY G+  E+GP 
Sbjct: 180 PTSALDVSIQAQVLNLFMDLQQQ-FRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPA 238

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           +++ ENP HPYT+ LL++ P +     + ++  I G   + LNPP+GC F+ RCP+A E 
Sbjct: 239 DKLYENPLHPYTRALLSATPAIHPDPTKPKIR-IQGELPNPLNPPEGCAFHKRCPYATER 297

Query: 297 CRDVEPKLVKVGRDHYAACH 316
           CR   P+L ++      ACH
Sbjct: 298 CRSEVPEL-RLLDQRQVACH 316


>sp|P45094|DPPF_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF
           >gi|1074010|pir||E64188 dipeptide transport ATP-binding
           protein dppF - Haemophilus influenzae (strain Rd KW20)
           >gi|972898|gb|AAA95975.1| (U17295) DppF [Haemophilus
           influenzae] >gi|1574111|gb|AAC22837.1| (U32798)
           dipeptide ABC transporter, ATP-binding protein (dppF)
           [Haemophilus influenzae Rd]
           Length = 327
           
 Score =  195 bits (490), Expect = 7e-49
 Identities = 115/319 (36%), Positives = 177/319 (55%), Gaps = 12/319 (3%)

Query: 3   LLDVRNLRVYYRTPVGY------VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           LL+   L+ YY    G       V+A+DGVSF++  G+   V GESGCGKSTL   L + 
Sbjct: 11  LLNAIGLKKYYPVKKGLFAKPQQVKALDGVSFQLERGKTLAVVGESGCGKSTLGRLLTMI 70

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
           + P +   G   +KG + +     E + ++  ++ I+ Q    +LNP K+I  I+ +   
Sbjct: 71  EEPTK---GELYYKGHNFLEND-SETKALRRKKIQIVFQNPYASLNPRKKIGSILEEPLI 126

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            +     +E  E +   +  V L     D YP   SGG RQR  +    +L+PD+++ADE
Sbjct: 127 INTKLSAKERREKVLSMMEKVGLRAEFYDRYPHMFSGGQRQRIAIARGLMLDPDVVVADE 186

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             SALDV+ +  V+ L+   +Q+ +  S +F++HDL+++  IAD VMVMY G+ +E G  
Sbjct: 187 PVSALDVSVRAQVLNLMMD-LQDELGLSYVFISHDLSVVEHIADEVMVMYLGRCIEKGTT 245

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           E++  NP HPYT+ LL++ PR+  + +RER+  + G   S +NPPKGC F  RC  A E 
Sbjct: 246 EQIFSNPQHPYTKALLSATPRLSPNLRRERIK-LTGELPSPINPPKGCAFNPRCWKATEK 304

Query: 297 CRDVEPKLVKVGRDHYAAC 315
           CR+ +P L +       AC
Sbjct: 305 CRENQPHLEQHTDGKLIAC 323


>pir||T34760 oligopeptide ABC transporter ATP-binding protein - Streptomyces
           coelicolor >gi|3402247|emb|CAA20183.1| (AL031184)
           oligopeptide ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 496
           
 Score =  195 bits (490), Expect = 7e-49
 Identities = 119/305 (39%), Positives = 174/305 (57%), Gaps = 13/305 (4%)

Query: 17  VGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMS 76
           VG VRAVDG+ FEV  GE  GV GESGCGKST+   LI R   +E   G   F+G+D+  
Sbjct: 60  VGAVRAVDGIDFEVRSGETLGVVGESGCGKSTMGR-LITRL--LEPTAGKVEFQGKDITH 116

Query: 77  LPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSM 136
           L    +R ++  ++ +I Q   ++LNP   I  IV    +  G      V++ ++  LS+
Sbjct: 117 LGVGGMRPLR-RDVQMIFQDPYSSLNPRHTIGTIVSAPFKLQGVQPEGGVKKEVQRLLSV 175

Query: 137 VKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHF 196
           V L+P   + YP E SGG RQR  +  +  LNP L++ADE  SALDV+ Q  V+ LL   
Sbjct: 176 VGLNPEHYNRYPHEFSGGQRQRIGIARALALNPRLVVADEPVSALDVSIQAQVVNLLDDL 235

Query: 197 MQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLP 256
            QE +  + + + HDL+++R ++DR+ VMY GK++E+   + + + P HPYT+ L++++P
Sbjct: 236 QQE-LGLTYVIIAHDLSVVRHVSDRIAVMYLGKIMELADRDLLYKTPMHPYTKALMSAVP 294

Query: 257 -----RMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDH 311
                R G   +R  L G    PI+   PP GCRF+TRC  A + C   EP L ++    
Sbjct: 295 IPDPARRGAKSERILLKGDVPSPIA---PPSGCRFHTRCWKATQVCTTTEPPLKELRPGQ 351

Query: 312 YAACH 316
             ACH
Sbjct: 352 QVACH 356


>pir||F82242 oligopeptide ABC transporter, ATP-binding protein VC1095 [imported]
           - Vibrio cholerae (group O1 strain N16961)
           >gi|9655564|gb|AAF94254.1| (AE004190) oligopeptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 336
           
 Score =  195 bits (490), Expect = 7e-49
 Identities = 114/324 (35%), Positives = 189/324 (58%), Gaps = 17/324 (5%)

Query: 3   LLDVRNLRVYYR---------TPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           LLDV++L+V++          T    ++AVDGV+  + EGE  GV GESGCGKST   ++
Sbjct: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73

Query: 54  ILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
           I     ++   G  ++ G+DL  + ++  R+    ++ +I Q  + +LNP   + DI+ +
Sbjct: 74  I---GLVQATHGEVVWLGQDLTRM-QEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAE 129

Query: 114 -LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
            L   +    ++EV++ ++E ++ V L P V + YP E SGG  QR  +  + +L P ++
Sbjct: 130 PLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMI 189

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           I DE  SALDV+ Q  V+ LL    +E +  S++F+ HDL++++ I+DRV+VMY G  VE
Sbjct: 190 ICDEPVSALDVSIQAQVVNLLKELQKE-LGLSLVFIAHDLSVVKHISDRVLVMYLGNAVE 248

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRER-LSGIPGYPISLLNPPKGCRFYTRCP 291
           +G  +E+  NP HPYT+ L++++P    + +R + +  + G   S +NPP GC F TRCP
Sbjct: 249 LGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCP 308

Query: 292 FAMEDCRDVEPKLVKVGRDHYAAC 315
            A  +C   +P ++K    H  +C
Sbjct: 309 QATAECAKTKP-VIKGSDIHSVSC 331


>sp|P37314|DPPD_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD
           >gi|2125993|pir||S61404 dipeptide transport protein dppD
           - Escherichia coli >gi|349228|gb|AAA23705.1| (L08399)
           peripheral membrane protein [Escherichia coli]
           >gi|466680|gb|AAB18519.1| (U00039) dppD [Escherichia
           coli] >gi|1789963|gb|AAC76566.1| (AE000431) putative
           ATP-binding component of dipeptide transport system
           [Escherichia coli K12]
           Length = 327
           
 Score =  194 bits (488), Expect = 1e-48
 Identities = 116/319 (36%), Positives = 174/319 (54%), Gaps = 6/319 (1%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           MALL+V  L V++       RAVD +S+ V +GEV G+ GESG GKS    +++ L   P
Sbjct: 1   MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYP 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                    F G+DL  +   E R +  +E+++I Q  M +LNP   +   + +  + H 
Sbjct: 61  GRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ 120

Query: 120 YADRREVEELLRERLSMVKLSPRVA--DMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
             ++    +   + L+ V +    +  D+YP +LSGGM QR  + ++    P LLIADE 
Sbjct: 121 GGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP 180

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDVT Q  +IELL    Q+  + +++ +THDLAL+ + A +++VMYAG+VVE G   
Sbjct: 181 TTALDVTIQAQIIELLLELQQKENM-ALVLITHDLALVAEAAHKIIVMYAGQVVETGDAH 239

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
            +   P HPYTQ LL +LP       +ERL+ +PG      + P GC    RCP+A + C
Sbjct: 240 AIFHAPRHPYTQALLRALPEFA--QDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRC 297

Query: 298 RDVEPKLVKVGRDHYAACH 316
           R  EP L  +     + CH
Sbjct: 298 RAEEPALNMLADGRQSKCH 316


>sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD
           >gi|2119773|pir||I40543 oligopeptide transport
           ATP-binding protein appD - Bacillus subtilis
           >gi|677943|gb|AAA62356.1| (U20909) AppD [Bacillus
           subtilis] >gi|2633490|emb|CAB12993.1| (Z99110)
           oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus subtilis]
           Length = 328
           
 Score =  193 bits (486), Expect = 2e-48
 Identities = 120/313 (38%), Positives = 179/313 (56%), Gaps = 9/313 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60
           LL+V NL+ Y+      + AVDGV F + +GE   + GESG GKS    S+  +++    
Sbjct: 4   LLEVNNLKTYFFRKKEPIPAVDGVDFHISKGETVALVGESGSGKSITSLSIMGLVQSSGG 63

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           +   GS   + +DL S   ++  KI+ +E+S+I Q  M +LNP   I + + ++   H  
Sbjct: 64  KIMDGSIKLEDKDLTSFTENDYCKIRGNEVSMIFQEPMTSLNPVLTIGEQITEVLIYHKN 123

Query: 121 ADRREVEELLRERLSMVKLS--PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             ++E  +   E L MV  S   ++   YP  LSGGMRQR  + ++   NP LLIADE T
Sbjct: 124 MKKKEARQRAVELLQMVGFSRAEQIMKEYPHRLSGGMRQRVMIAIALSCNPKLLIADEPT 183

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  V+EL+    Q+    SI+ +THDL ++ + ADRV+VMY G+VVE   +++
Sbjct: 184 TALDVTIQAQVLELMKDLCQK-FNTSILLITHDLGVVSEAADRVIVMYCGQVVENATVDD 242

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +   P HPYT+ LL S+P   +  + ++L+ I G   +  N P GCRF  RCP AM+ C 
Sbjct: 243 LFLEPLHPYTEGLLTSIPV--IDGEIDKLNAIKGSVPTPDNLPPGCRFAPRCPKAMDKCW 300

Query: 299 DVEPKLV--KVGR 309
             +P L+  K GR
Sbjct: 301 TNQPSLLTHKSGR 313


>pir||A72618 probable oligopeptide transport ATP-binding protein APE1402 -
           Aeropyrum pernix (strain K1) >gi|5105085|dbj|BAA80399.1|
           (AP000061) 347aa long hypothetical oligopeptide
           transport ATP-binding protein [Aeropyrum pernix]
           Length = 347
           
 Score =  192 bits (483), Expect = 5e-48
 Identities = 115/298 (38%), Positives = 166/298 (55%), Gaps = 8/298 (2%)

Query: 19  YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLP 78
           YV+AVD V+  +  G+  G+ GESG GK+T    ++  + P    GG   F G D+M L 
Sbjct: 51  YVKAVDNVTIGIPRGKTLGLVGESGSGKTTFGRVILRLEEPT---GGRIFFDGIDVMKLR 107

Query: 79  RDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSMVK 138
              L++ +     II Q    +LNP K I +++ +  + HG     +++E +   L  V 
Sbjct: 108 GRGLKEFR-RRAQIIFQDPYGSLNPRKTIFNLIAEPIKVHGIKVG-DLQEYIVSLLYQVG 165

Query: 139 LSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQ 198
           L+      YP E SGG RQR  +     L P+ ++ DE TSALDV+ Q  ++ LL   +Q
Sbjct: 166 LNETHLYRYPHEFSGGQRQRIAIARVLALKPEFIVLDEPTSALDVSVQAQILNLLKD-LQ 224

Query: 199 EGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRM 258
                + +F++HDL ++R ++D + VMY GK+VE G  EEV E P HPYT++LL S+P  
Sbjct: 225 RKYSLTYLFISHDLGVVRYMSDYIAVMYLGKIVEFGEAEEVFEKPLHPYTKVLLESIPVP 284

Query: 259 GVHY-KRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAAC 315
                KR     I G P S +NPP GCRF TRCP A++ C + EP L +V R H+ AC
Sbjct: 285 DPEVAKRRSRIRIKGEPPSPINPPSGCRFRTRCPIAVDKCLE-EPPLEEVERGHWVAC 341


>gb|AAA23706.1| (L08399) peripheral membrane protein [Escherichia coli]
           Length = 333
           
 Score =  191 bits (481), Expect = 8e-48
 Identities = 109/293 (37%), Positives = 165/293 (56%), Gaps = 6/293 (2%)

Query: 16  PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLM 75
           P   V+A+DGVSF +  G+   V GESGCGKSTL   L + + P    GG   ++G+DL+
Sbjct: 31  PERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPT---GGELYYQGQDLL 87

Query: 76  SLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLS 135
                + +K++  ++ I+ Q    +LNP K++  I+ +    +    + +  E     ++
Sbjct: 88  KHD-PQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMA 146

Query: 136 MVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHH 195
            V L     D YP   SGG RQR  +    +L+PD++IADE  SALDV+ +  V+ L+  
Sbjct: 147 KVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMD 206

Query: 196 FMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSL 255
             QE +  S +F++HDL+++  IAD VMVMY G+ VE G  +++  NP HPYTQ LL++ 
Sbjct: 207 LQQE-LGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSAT 265

Query: 256 PRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVG 308
           PR+    +RER+  + G   S LNPP GC F  RC      C  ++P+L   G
Sbjct: 266 PRLNPDDRRERIK-LSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYG 317


>sp|P37313|DPPF_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF
           >gi|1073370|pir||S47762 dipeptide transport protein dppF
           - Escherichia coli >gi|466679|gb|AAB18518.1| (U00039)
           was dppE [Escherichia coli] >gi|1789962|gb|AAC76565.1|
           (AE000431) putative ATP-binding component of dipeptide
           transport system [Escherichia coli K12]
           Length = 334
           
 Score =  191 bits (481), Expect = 8e-48
 Identities = 109/293 (37%), Positives = 165/293 (56%), Gaps = 6/293 (2%)

Query: 16  PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLM 75
           P   V+A+DGVSF +  G+   V GESGCGKSTL   L + + P    GG   ++G+DL+
Sbjct: 31  PERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPT---GGELYYQGQDLL 87

Query: 76  SLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLS 135
                + +K++  ++ I+ Q    +LNP K++  I+ +    +    + +  E     ++
Sbjct: 88  KHD-PQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMA 146

Query: 136 MVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHH 195
            V L     D YP   SGG RQR  +    +L+PD++IADE  SALDV+ +  V+ L+  
Sbjct: 147 KVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMD 206

Query: 196 FMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSL 255
             QE +  S +F++HDL+++  IAD VMVMY G+ VE G  +++  NP HPYTQ LL++ 
Sbjct: 207 LQQE-LGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSAT 265

Query: 256 PRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVG 308
           PR+    +RER+  + G   S LNPP GC F  RC      C  ++P+L   G
Sbjct: 266 PRLNPDDRRERIK-LSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYG 317


>pir||C72536 probable oligopeptide transport ATP-binding protein APE1576 -
           Aeropyrum pernix (strain K1) >gi|5105263|dbj|BAA80576.1|
           (AP000062) 377aa long hypothetical oligopeptide
           transport ATP-binding protein [Aeropyrum pernix]
           Length = 377
           
 Score =  189 bits (476), Expect = 3e-47
 Identities = 123/323 (38%), Positives = 177/323 (54%), Gaps = 41/323 (12%)

Query: 3   LLDVRNLRVYY-----------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVH 51
           +L V +LRV++             P  +V+AVDGVSF +  GEVF + GESGCGK+T   
Sbjct: 19  VLRVEDLRVWFPLRRSITELITMKPQRFVKAVDGVSFSIARGEVFCLVGESGCGKTT-TG 77

Query: 52  SLILRKPPMEYKGGSAIFKGR--------------------DLMSLPRDELRKIQYSELS 91
             ILR   ++  GG   FK +                    DL+++PR + + ++  EL 
Sbjct: 78  KAILRL--VKATGGRVFFKPKKEVLEELERRGVKSLGDGFVDLLAVPRRKFKPLR-RELQ 134

Query: 92  IIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSMVKLSPR--VADMYPV 149
           I+ Q    +LNP   IK I+ D    H   + RE EE++   L  VKL+P     D YP 
Sbjct: 135 IVYQDPYGSLNPRFTIKRILEDPLLIHSIGNAREREEMVARMLEAVKLTPASDFMDRYPH 194

Query: 150 ELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVT 209
           +LSGG RQR  +  + +LNP L++ADE  S LDV+ +  ++ELL  F +E +  S++F+T
Sbjct: 195 QLSGGQRQRVAIARAFILNPSLVVADEPVSMLDVSIRAEILELLLGF-REKLGTSLLFIT 253

Query: 210 HDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSG 269
           HDLA+ R I DR+ VMY GK+VE G    ++E P HPYT+ L+ ++P       R++L  
Sbjct: 254 HDLAVARYICDRIAVMYLGKIVETGDARRIIERPIHPYTKALVAAIPEPDPS-NRKKLRE 312

Query: 270 IP--GYPISLLNPPKGCRFYTRC 290
           +P  G   S    P GCRF+ RC
Sbjct: 313 VPIKGEIPSAAAIPPGCRFHPRC 335


>emb|CAC05751.1| (AL391751) putative peptide transport system ATP-binding protein
           [Streptomyces coelicolor]
           Length = 356
           
 Score =  189 bits (476), Expect = 3e-47
 Identities = 124/336 (36%), Positives = 181/336 (52%), Gaps = 31/336 (9%)

Query: 3   LLDVRNLRVYY--------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           +L+VR L  +Y        +  VG V+AVDGV F +  GE  G+ GESGCGKST+   L+
Sbjct: 8   ILEVRGLVKHYPLTSGILFKKQVGAVKAVDGVDFRLARGETLGIVGESGCGKSTVAKMLV 67

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
             + P     G   +KG D+  L    L+ ++ + + ++ Q    +LNP   + DI+ + 
Sbjct: 68  NLERPT---AGEIRYKGEDITRLSGRALKSVRRN-IQMVFQDPYTSLNPRMTVGDIIGEA 123

Query: 115 AREHG-YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
              H   A + +    +++ L +V L+P   + YP + SGG RQR  +     L P++++
Sbjct: 124 YDIHPEVAPKGDRRRRVQDLLDVVGLNPEYINRYPHQFSGGQRQRIGIARGLALRPEIIV 183

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE  SALDV+ Q  VI L+   +Q+    S IF+ HDL+++R I+DRV VMY G++VE 
Sbjct: 184 ADEPVSALDVSVQAQVINLMAR-LQDEFDLSYIFIAHDLSIVRHISDRVGVMYLGRIVET 242

Query: 234 GPMEEVLENPAHPYTQLLLNSL----PRMGVHYKRERLSG-IPGYPISLLNPPKGCRFYT 288
           G  EE+ ++P HPYTQ LL+++    P    H +R  LSG +P    S  N P GCRF T
Sbjct: 243 GRDEEIYDHPTHPYTQALLSAVPVPDPEAREHRERIILSGDVP----SPTNIPSGCRFRT 298

Query: 289 RCPFAMEDCRDVEPKL--------VKVGRDHYAACH 316
           RC  A E C    P L        V     H +ACH
Sbjct: 299 RCWKARERCALEVPALAVPAEFRSVSGPAAHDSACH 334


>pir||E83082 probable ATP-binding component of ABC transporter PA4505 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9950745|gb|AAG07893.1|AE004864_5 (AE004864) probable
           ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa]
           Length = 324
           
 Score =  188 bits (473), Expect = 7e-47
 Identities = 118/310 (38%), Positives = 178/310 (57%), Gaps = 13/310 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M+LLD++NL V +      V  VDG+   V +GEV  + GESG GKS  + +L+ L   P
Sbjct: 1   MSLLDIKNLSVRFGDTTA-VPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAP 59

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH- 118
                    F G D+++L   + R+I   +++++ Q  M ALNP+  +   + ++ R H 
Sbjct: 60  GWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHL 119

Query: 119 ---GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
              G A R+   ELL ER+ +   + R+ D YP +LSGGM QR  + ++    P LLIAD
Sbjct: 120 GLRGKALRQRALELL-ERVEIPAAASRL-DAYPHQLSGGMSQRVAIAMAIAAEPKLLIAD 177

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E T+ALDVT Q  ++ELL +  ++  + ++I +THDLA++ + A RV VMYAG+ VEIG 
Sbjct: 178 EPTTALDVTIQAQIMELLLNLQRDQDM-ALILITHDLAVVAETAQRVCVMYAGEAVEIGG 236

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRE-RLSGIPGYPISLLNPPKGCRFYTRCPFAM 294
           +  + + P HPYT+ L+ ++P    H   E RL+ +PG      + P+GC    RCP+A 
Sbjct: 237 VPALFDRPTHPYTEALIKAIPE---HCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQ 293

Query: 295 EDCRDVEPKL 304
           E CR   P L
Sbjct: 294 EHCRQERPAL 303


>pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AAC07852.1|
           (AE000774) ABC transporter [Aquifex aeolicus]
           Length = 305
           
 Score =  188 bits (472), Expect = 9e-47
 Identities = 108/305 (35%), Positives = 181/305 (58%), Gaps = 25/305 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVR-----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           M LL ++NL   Y+ P G++R     A+  VS  + +G+   + GESG GKSTL   ++ 
Sbjct: 1   MELLSIQNLTKVYKVPAGFLRKKNFFALKEVSLSIKQGDFLAIVGESGSGKSTLGKIILR 60

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
            + P +   G   FKG+D+ S+ ++  RK+     S + Q   ++LNP  ++++I+ +  
Sbjct: 61  LEKPTK---GKVSFKGKDIFSMGKEYTRKV-----SAVFQDPRSSLNPRMKVEEILEEPL 112

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
             H    R+E    + + L  V+LS  + +  P+++SGG  QR  +  + +L P+L++AD
Sbjct: 113 IVHRVKGRKE---RVLKVLQRVRLSEELLEKRPLQISGGQAQRVAIARALILEPELIVAD 169

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E T++LDV+ Q  ++EL      +GI  S  FVTHD+ ++ ++A+ V V+YAG ++E+G 
Sbjct: 170 EPTASLDVSVQEEILELFKELNSKGI--SFFFVTHDIRVVEKVANMVGVIYAGILMELGK 227

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRER--LSGIPGYPISLLNPPKGCRFYTRCPFA 293
            EEVL+NP HPYT+ LL ++P   V + ++R  L  +    +S+  P +GC FY RCP A
Sbjct: 228 KEEVLKNPLHPYTKFLLENVP---VRHPKDRKPLKYLQEEEVSI--PEEGCPFYPRCPEA 282

Query: 294 MEDCR 298
           ME+C+
Sbjct: 283 MEECK 287


>pir||F71130 probable oligopeptide transport ATP-binding protein appF -
           Pyrococcus horikoshii >gi|3257221|dbj|BAA29904.1|
           (AP000003) 323aa long hypothetical oligopeptide
           transport ATP-binding protein APPF [Pyrococcus
           horikoshii]
           Length = 323
           
 Score =  187 bits (470), Expect = 2e-46
 Identities = 118/309 (38%), Positives = 173/309 (55%), Gaps = 26/309 (8%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLPR 79
           +RAVD VSFE+ + E+ G+ GESGCGKSTL   L+    P     G+ +FKG+D+  L  
Sbjct: 29  IRAVDNVSFEIKKNEILGLVGESGCGKSTLGKLLVRLLEPTS---GTVLFKGQDIYKLRG 85

Query: 80  DELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA-DRREVEELLRERLSMVK 138
            +L++ + S + ++ Q    + +P   + + + +    H  A ++ E   L  +    V 
Sbjct: 86  KKLKEYRKS-VQMVFQNPYTSFDPRLTLFENIAEPLYTHKLALNKEEALTLAMQYFEDVG 144

Query: 139 LSPRVADM--YPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHF 196
           L+P    +  YP ELSGG  QRA++  +  L P+ ++ADE TS LD + +  ++ L+   
Sbjct: 145 LTPPEDFLMRYPHELSGGQLQRASIARAIALEPEFIVADEPTSMLDASLRSGILNLIKKL 204

Query: 197 MQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLN-SL 255
            +E +  S +F+THDL     IADR+ VMY GK+VEIG  +EVL+NP HPYTQ LL  +L
Sbjct: 205 RKE-LHTSWLFITHDLPSAYYIADRIAVMYLGKIVEIGESKEVLKNPLHPYTQALLEANL 263

Query: 256 P-RMGVHYKRERLSGIP------GYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVG 308
           P       K  ++ G P      GY          CRF+ RCP+A E C+  EP LV+V 
Sbjct: 264 PIDPDASLKEPKVKGEPKPVFETGY----------CRFFPRCPYAFEKCKKEEPPLVEVK 313

Query: 309 RDHYAACHL 317
           +DHY AC L
Sbjct: 314 KDHYVACWL 322


>dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 332
           
 Score =  187 bits (470), Expect = 2e-46
 Identities = 109/322 (33%), Positives = 174/322 (53%), Gaps = 13/322 (4%)

Query: 3   LLDVRNLRVYYRTPVGY-------VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           LL+ + L  ++    G+       +RAVDGV   +  GE  G+ GESGCGKSTL   L+ 
Sbjct: 5   LLEAKGLTKHFDVSEGFFKRKKAVLRAVDGVDLTIYAGETLGIVGESGCGKSTLGQLLMR 64

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
              P     G+  F G D ++L  + LR+ + S++ II Q   ++LNP   +++I+ +  
Sbjct: 65  LLEPTR---GTLSFAGSDFLALKGEALRQ-KRSDIQIIFQDPFSSLNPRMTVREIIGEPL 120

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
           + H  A   ++ + + E +  V L    A  YP E SGG RQR  +  +  L P L+I D
Sbjct: 121 KTHRLAKGNDLIKRVDELMDAVGLDRSYAKRYPHEFSGGQRQRIGIARAIALKPKLIICD 180

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E  SALDV+ Q  ++ L+   +Q+    + +F+ H L  ++ I+DR+ VMY GKVVE+  
Sbjct: 181 EPVSALDVSIQAQILNLMVR-LQKEFQLTFLFIAHGLPAVKHISDRMAVMYLGKVVELAS 239

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRE-RLSGIPGYPISLLNPPKGCRFYTRCPFAM 294
            + +   P HPY++ L+ ++P      + + +   + G   S ++PP GCRF+ RCP+A 
Sbjct: 240 KDALFAQPMHPYSEGLIQAVPIPDPTVRNDKKWVTLEGDLPSPVHPPSGCRFHPRCPYAQ 299

Query: 295 EDCRDVEPKLVKVGRDHYAACH 316
           + C   EP L +    H+ ACH
Sbjct: 300 DKCTVQEPALTEKEPGHFVACH 321


>sp|P77268|YDDP_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDDP
           >gi|7445758|pir||G64901 ABC-type transport protein b1484
           - Escherichia coli >gi|1742424|dbj|BAA15139.1| (D90789)
           Dipeptide transport ATP-binding protein DppD.
           [Escherichia coli] >gi|1742435|dbj|BAA15149.1| (D90790)
           Dipeptide transport ATP-binding protein DppD.
           [Escherichia coli] >gi|1787759|gb|AAC74557.1| (AE000245)
           putative ATP-binding component of a transport system
           [Escherichia coli K12]
           Length = 328
           
 Score =  186 bits (467), Expect = 3e-46
 Identities = 116/310 (37%), Positives = 170/310 (54%), Gaps = 8/310 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           +LD++ L + +    G V A++ VS ++  GE+ G+ GESG GKS     ++   P   Y
Sbjct: 5   VLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSY 64

Query: 63  --KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G     G D+++    +LR+ + + +++I Q  M ALNPT+RI   + D+ R H  
Sbjct: 65  CVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQP 124

Query: 121 ADRREVEELLRERLSMVKLSPRVADM--YPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             RRE      + L  +++   V  M  YP ELSGGMRQR  + ++    P L+IADE T
Sbjct: 125 ISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIADEPT 184

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  V+ LL H  +     +++F++HD+A++ Q+ D V VMYAG V+E G   +
Sbjct: 185 TALDVTVQLQVLRLLKHKARASGT-AVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTAD 243

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           V+ +P HPYT  LL   P  GV   R+ L  IPG   +L + P GC F  RC  A   C 
Sbjct: 244 VIHHPRHPYTIGLLQCAPEHGV--PRQLLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQCE 301

Query: 299 DVEPKLVKVG 308
           +V P L   G
Sbjct: 302 NV-PALTACG 310


>sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN RV1281C
           >gi|7445626|pir||A70756 probable ABC-type peptide
           transport protein - Mycobacterium tuberculosis (strain
           H37RV) >gi|1480305|emb|CAB00901.1| (Z77137) oppD
           [Mycobacterium tuberculosis]
           Length = 612
           
 Score =  185 bits (464), Expect = 8e-46
 Identities = 115/318 (36%), Positives = 171/318 (53%), Gaps = 9/318 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL+V +L V +RT    V AV G+S+ V  GEV  + GESG GKS    +++   P    
Sbjct: 4   LLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYAQ 63

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH---- 118
             GS   +G +L+ L  + + + +   +  + Q  M+AL P   + D + +    H    
Sbjct: 64  VRGSVRLQGTELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQPRV 123

Query: 119 -GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
              A RR   ELL   L  +    R +  +P ELSGG RQR  + ++   +PDLLI DE 
Sbjct: 124 GKKAARRRAVELL--DLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDLLICDEP 181

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDVT Q  ++++L    ++     ++ +THDL ++ + ADR +VMYAG+VVE   + 
Sbjct: 182 TTALDVTVQAQILDVL-KAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVN 240

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
           ++  +   PYT  LL S+PR+    +  RL  IPG P SL     GC F  RCP  +++C
Sbjct: 241 DLYRDRRMPYTVGLLGSVPRLDA-AQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDEC 299

Query: 298 RDVEPKLVKVGRDHYAAC 315
              EP+L+ V  DH AAC
Sbjct: 300 LTAEPELLDVATDHRAAC 317


 Score =  152 bits (380), Expect = 5e-36
 Identities = 92/247 (37%), Positives = 141/247 (56%), Gaps = 6/247 (2%)

Query: 11  VYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFK 70
           V  R  +G VRAVDG+S E+ +G   G+ GESG GKST +H ++    P   + GS    
Sbjct: 365 VVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGKSTTLHEILELAAP---QSGSIEVL 421

Query: 71  GRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELL 130
           G D+ +L   E R ++  ++ ++ Q  + +L+P   + D++ +  + +G+  + E    +
Sbjct: 422 GTDVATLGTAERRSLR-RDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFG-KNETHARV 479

Query: 131 RERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVI 190
            E L +V L    A  YP E SGG +QR  +  +  L P +L  DE  SALDV+ Q  +I
Sbjct: 480 AELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGII 539

Query: 191 ELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQL 250
            LL   +QE    S +FV+HDL++++ +A +V VM AG VVE G  EEV  NP H YT+ 
Sbjct: 540 NLLLD-LQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYTRR 598

Query: 251 LLNSLPR 257
           LL ++P+
Sbjct: 599 LLGAVPQ 605


>gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (dppF-1) [Sulfolobus
           solfataricus]
           Length = 325
           
 Score =  183 bits (461), Expect = 2e-45
 Identities = 107/321 (33%), Positives = 188/321 (58%), Gaps = 16/321 (4%)

Query: 3   LLDVRNLRVYYR-----TPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LR 56
           ++ V NL+VY+      T    V+A+DGV+  + E E+ GV GESG GK+TL    I L+
Sbjct: 14  VVKVENLKVYFTKGGMFTKKYVVKALDGVTLSIKEREIMGVVGESGSGKTTLGRVTIGLQ 73

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
           KP     G   I      +++ + +L+ I  + + +I Q   ++++P  R+ D+   LA 
Sbjct: 74  KPT---SGNVYIKADNKEINVNKAKLKDIS-NYVQMIYQDPYSSIDPIMRVYDV---LAT 126

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
              Y    ++++ + E + +V L   + +    +LSGG RQR ++  + ++NP  ++ADE
Sbjct: 127 PLKYKKMSDIDKKIEEAMRLVDLPLELLENRVYQLSGGQRQRLSIARAIVVNPKYIVADE 186

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ LD + +  +++++    +E    S +++TH+L + + I+DR++V+Y GK+VE+G  
Sbjct: 187 PTTMLDASLKGEILKIIKD-ARESKGFSFMYITHELPIAKIISDRIIVLYLGKIVELGNS 245

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
            E+++NP HPYTQ L+   PR+     R+++  I    + ++ P KGC FY RCPFAM  
Sbjct: 246 NEIIKNPLHPYTQGLIEVYPRIDPSL-RDKIKEIK-IKVDIVRPDKGCVFYPRCPFAMPK 303

Query: 297 CRDVEPKLVKVGRDHYAACHL 317
           C++ EP+L +V ++HY AC L
Sbjct: 304 CKEQEPELKEVSQNHYVACWL 324


>pir||JC5009 nucleotide-binding protein D - Methanosarcina mazei
           >gi|1491738|emb|CAA62801.1| (X91502) ABC transporter
           [Methanosarcina mazei]
           Length = 317
           
 Score =  182 bits (458), Expect = 4e-45
 Identities = 109/306 (35%), Positives = 164/306 (52%), Gaps = 11/306 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL+V+NL+V +   +  V A+ G+SF +GE E   + GE+GCGKS   H+++   PP   
Sbjct: 9   LLEVKNLQVSF-LGIKTVTALSGISFSIGERETLALVGETGCGKSVAAHAIMRLLPPESG 67

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD 122
             G+   +GR+L+ L   E+ +I+  E+ II Q    ALNP   I   + +  R H    
Sbjct: 68  VKGTVELRGRNLLGLSEKEMTEIRGKEIGIIFQNPSLALNPVYSIGHQLAEPLRLHRKEK 127

Query: 123 RREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           +++      E L  +  +    + + YP   SGGM QR  +  ST+L+P LLIADE    
Sbjct: 128 KKKALSRAAEALKNMGFANTGEIINYYPSWCSGGMNQRFLIAASTILDPALLIADEPGKG 187

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LD +    +   L    +E    +++ ++HDL  +R +ADRV VMYAG++VEI     + 
Sbjct: 188 LDRSCLSELEAGLKRLKEEKKT-ALLLISHDLGFVRNLADRVAVMYAGEIVEIADSSGIF 246

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           E P HPYT+ LLNSLP  G          IPG+   L   P GCRF+ RCP     C + 
Sbjct: 247 EEPLHPYTKGLLNSLPEKG-------FIPIPGFSPPLSRLPSGCRFHPRCPLRKRCCIEN 299

Query: 301 EPKLVK 306
           +P++++
Sbjct: 300 QPEIIE 305


>gb|AAG20448.1| (AE005117) oligopeptide ABC transporter ATP-binding; YkfD
           [Halobacterium sp. NRC-1]
           Length = 445
           
 Score =  182 bits (458), Expect = 4e-45
 Identities = 111/293 (37%), Positives = 168/293 (56%), Gaps = 10/293 (3%)

Query: 3   LLDVRNLRVYY----RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKP 58
           L++V +L+ +Y    R     V+AVDGV+FE+ EGE  G+ GESG GK+TL  +LI  + 
Sbjct: 19  LVEVTDLKKHYGDGGRFSGPPVKAVDGVNFEIQEGETLGLVGESGSGKTTLGRTLIQLET 78

Query: 59  PMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH 118
             E   G+  F GRD+  L   +L++ +     I+ Q   ++LN    I +IV +    H
Sbjct: 79  ATE---GTVSFDGRDITKLTGSDLKQWR-KNAQIVFQDPDSSLNDRMTIGEIVREPLDAH 134

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            +    E  + ++E LS V L       YP + SGG RQR  +  +  L P+ ++ DE  
Sbjct: 135 DWNSPAERRDRVKELLSSVGLQADHYYRYPHQFSGGQRQRIGIARALALEPEFMVLDEPV 194

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           SALD + Q  ++ LL   +Q+    + +F+ HDL+++R I DRV VMY GK++EIG  EE
Sbjct: 195 SALDASVQAKILNLLED-LQDEFGLTYLFIAHDLSVVRHICDRVAVMYLGKIMEIGETEE 253

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           +  +  +PYT+ LL+++PR      R R++ +PG P S  NPP GC+F TRCP
Sbjct: 254 LYADAKNPYTRSLLSAIPRPDPTIDRNRIT-LPGAPPSPRNPPAGCQFSTRCP 305


>pir||C72452 probable peptide transport ATP-binding protein APE2263 - Aeropyrum
           pernix (strain K1) >gi|5105964|dbj|BAA81275.1|
           (AP000064) 347aa long hypothetical peptide transport
           ATP-binding protein [Aeropyrum pernix]
           Length = 347
           
 Score =  182 bits (457), Expect = 5e-45
 Identities = 119/333 (35%), Positives = 178/333 (52%), Gaps = 28/333 (8%)

Query: 3   LLDVRNLRVYYRT-----------PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVH 51
           ++ +R L+V+Y             P   VRAVDGV   + EGEV  + GESGCGK+TL  
Sbjct: 13  IVSIRGLKVHYPVYYSLLKRILGRPDAVVRAVDGVDLGIREGEVLAIVGESGCGKTTLGK 72

Query: 52  SLILRKPPMEYKGGSAIFKGRDLMS--LPRDE-LRKIQYSELSIIPQYAMNALNPTKRIK 108
           +++  + P +   G+  ++G  L    L RD  LR+    +L ++ Q    +L+P   + 
Sbjct: 73  AIVGIEEPSD---GAIYYRGELLTPHRLARDRRLRR----KLQMVFQDPYKSLDPLMPVG 125

Query: 109 DIVWDLAREHGYADRREVEELLRERLSMVKLSPRVADMY---PVELSGGMRQRATMVVST 165
           D V +    HG A   E      E L  V L+P   + Y   P +LSGG RQR  +  + 
Sbjct: 126 DQVAEPLVIHGLARGEEARRRAVEMLETVGLTPG-REFYWRKPHQLSGGQRQRVAIARTL 184

Query: 166 LLNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVM 225
           +L P++++ADE  S +DV+ +  +++L+  + +     +I+ +THD+A+ R +ADR+ VM
Sbjct: 185 VLEPEVIVADEPVSMIDVSMRASILDLIMDYHRR-TGATIVLITHDIAVARAVADRIAVM 243

Query: 226 YAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCR 285
           Y GK+VE+G    V+ENP HPYT  L+ S P   +  +R     I G   S +  P GCR
Sbjct: 244 YLGKIVEVGEPRSVIENPRHPYTAALVTSTP--SISRRRPPRFPISGEVPSAVAIPPGCR 301

Query: 286 FYTRCPFAMEDCRDVEPKLVKVGRDHYAACHLL 318
           F+ RCP A   CR  EP LV+ G   YA  H L
Sbjct: 302 FHPRCPLASSLCRSREPALVEEGGRLYACHHPL 334


>gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola]
           Length = 385
           
 Score =  182 bits (456), Expect = 7e-45
 Identities = 105/306 (34%), Positives = 172/306 (55%), Gaps = 10/306 (3%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPMEYKGGSAIFKGRDLMSLP 78
           V A DG+   + EGE  G+ GESGCGKSTL  +++ L KP      G   F+G ++ +  
Sbjct: 85  VIANDGIDLVIHEGETVGLVGESGCGKSTLGRTILKLYKPT----AGEIFFEGENITNYT 140

Query: 79  RDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRRE--VEELLRERLSM 136
             ++  ++  ++ II Q   ++LNP   +  I+ +   EHG   +++   E+ ++E ++ 
Sbjct: 141 VTQMMPLR-KKMQIIFQDPYSSLNPKMTVGQIIGEALLEHGMFKKKDPAYEKYVKEIMNT 199

Query: 137 VKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHF 196
             L+  +   YP E SGG RQR  +  +  L P  ++ DE  SALDV+ Q  +I LL+  
Sbjct: 200 CGLADYMIYRYPHEFSGGQRQRIGIARALALKPKFIVCDEAVSALDVSIQSQIINLLNDL 259

Query: 197 MQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLP 256
            +E  + S +F++HDL++++ I+DR+ VMY G +VE     E+  NP HPYT++LL+++P
Sbjct: 260 QKEFNL-SYLFISHDLSVVKHISDRIGVMYLGNMVEFTDKREMYANPLHPYTKVLLSAIP 318

Query: 257 RMGVHYKR-ERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAAC 315
              +   R +R   + G   S +  P GC+F+TRCP A + C+   P+  +    H+ AC
Sbjct: 319 ETDLQKMRTKRRILLEGDIPSNIITPTGCKFHTRCPIAKDICKREIPQFKEEKPGHFVAC 378

Query: 316 HLLGGE 321
           H  G E
Sbjct: 379 HFSGAE 384


>emb|CAA61525.1| (X89237) oligopeptidepermease [Streptococcus pyogenes]
           Length = 356
           
 Score =  181 bits (454), Expect = 1e-44
 Identities = 115/324 (35%), Positives = 180/324 (55%), Gaps = 7/324 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +L  +++ V +      + A+  VS E+ EGEV    GESG GKS L  +   + +    
Sbjct: 8   ILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGR 67

Query: 62  YKGGSAIFKGRDLMSLPRD-ELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
              GS +++G++L  L  + E  KI+ S+++ I Q  M +L+P K I   + ++  +H  
Sbjct: 68  IANGSIVYRGQELTDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQK 127

Query: 121 ADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
               + +E+  + ++ V +  + +  + YP E SGGMRQR  + ++    PD+LI DE T
Sbjct: 128 VSHAKAKEMALDYMNKVGIPNAKKRFEDYPFEYSGGMRQRIVIAIALACRPDILICDEPT 187

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++ELL    +E    +IIF+THDL ++  IAD+V VMYAG++VE G +EE
Sbjct: 188 TALDVTIQAQIVELLKSLQREYHF-TIIFITHDLGVVASIADKVAVMYAGEIVEFGTVEE 246

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  +P HPYT  LL+SLP++    +   L  IPG P SL +P  G  F  R  +AM    
Sbjct: 247 IFYDPRHPYTWSLLSSLPQLA--DESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDF 304

Query: 299 DVEPKLVKVGRDHYAACHLLGGES 322
           +  P  + V   H+A   LL  E+
Sbjct: 305 EKAPPAINVSETHWAKTWLLHPEA 328


>pir||B69856 oligopeptide transport ATP-binding protein homolog ykfD - Bacillus
           subtilis >gi|2632021|emb|CAA05580.1| (AJ002571) YkfD
           [Bacillus subtilis] >gi|2633654|emb|CAB13157.1| (Z99110)
           similar to oligopeptide ABC transporter (permease)
           [Bacillus subtilis]
           Length = 327
           
 Score =  181 bits (454), Expect = 1e-44
 Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 13/305 (4%)

Query: 1   MALLDVRNLRVYYRT-PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP 59
           + LL+V  L++++       V+AVDGV+F++ EGE FG+ GESGCGKSTL   L+    P
Sbjct: 4   LPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRLYQP 63

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
            E   GS  ++G +L +L   E       +L +I Q    +LNP   +++I+ +    H 
Sbjct: 64  TE---GSVTYRGTNLHALSEKEQFAFN-RKLQMIFQDPYASLNPRMTVREIILEPMEIHN 119

Query: 120 -YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            Y   +    ++ E L  V L P     YP E SGG RQR  +  +  LNP+ ++ADE  
Sbjct: 120 LYNTHKARLSVVDELLEAVGLHPDFGSRYPHEFSGGQRQRIGIARALSLNPEFIVADEPI 179

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           SALDV+ Q  V+ LL    +E  + + +F+ HDL++++ I+DR+ VMY G ++EI     
Sbjct: 180 SALDVSVQAQVVNLLKRLQKEKGL-TFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGT 238

Query: 239 VLENPAHPYTQLLLNSLPRMG--VHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMED 296
           +   P HPYT+ LL+S+P     +  KRER+  + G   S +NPP GC F TRCP   E 
Sbjct: 239 LYREPLHPYTKALLSSIPIPDPELEDKRERIL-LKGELPSPVNPPSGCVFRTRCP---ER 294

Query: 297 CRDVE 301
           C +VE
Sbjct: 295 CLNVE 299


>dbj|BAA03322.1| (D14438) ATP-binding protein [Synechococcus elongatus]
           Length = 531
           
 Score =  178 bits (447), Expect = 8e-44
 Identities = 101/254 (39%), Positives = 149/254 (57%), Gaps = 5/254 (1%)

Query: 3   LLDVRNLRVYY---RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP 59
           LL++R LRV Y    T       VDGVSF V  GE FG+ G SGCGKST+  +++   PP
Sbjct: 4   LLELRELRVAYPRMETSSAATFVVDGVSFCVAAGERFGLVGASGCGKSTIGKAILRLLPP 63

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G    +G+ L+ L   +L++++  ++ ++ Q  M  LNP   I D   +L R H 
Sbjct: 64  GSQIFGQIALQGQSLLGLSASQLQRLRGEQIGLVFQDPMTRLNPLMSIYDHCDELLRSHW 123

Query: 120 YA-DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
           ++  R +  + + E L  VK+       YP ELSGGMRQR  + ++ LLNP L+IADE T
Sbjct: 124 FSWSRPQRRQRIIEVLERVKIPANRLHQYPHELSGGMRQRVAIALALLLNPPLIIADEPT 183

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT    ++E L    Q+   + ++ ++HDLAL+ +  DR+ VM+ GK++E+G   +
Sbjct: 184 TALDVTVAAEILEELTRLCQQE-QRGLLLISHDLALMAKYCDRLAVMHQGKIMELGAAHQ 242

Query: 239 VLENPAHPYTQLLL 252
           VL+ P HPYTQ LL
Sbjct: 243 VLQRPQHPYTQSLL 256


 Score =  162 bits (406), Expect = 5e-39
 Identities = 102/257 (39%), Positives = 143/257 (54%), Gaps = 12/257 (4%)

Query: 3   LLDVRNLRVYYRT-----PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRK 57
           LL V NL+ +YR      P   +RAVDGV   +  GE  G+ GESGCGKSTL   LIL+ 
Sbjct: 275 LLRVENLQRHYRLGGWLQPQTTIRAVDGVDLTLRRGETLGLVGESGCGKSTLSR-LILQL 333

Query: 58  PPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE 117
            P     G  +F GR L  L   +LR+ +  +L +I Q     LNP   +   + +    
Sbjct: 334 IPAN--AGDVVFLGRSLTQLSAAQLRRTR-RDLQMIFQDPHACLNPKMTVAQNLLEPLLI 390

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADM--YPVELSGGMRQRATMVVSTLLNPDLLIAD 175
           H    +R  +E +RE L  V+L+P  A +  YP  LSGG RQR  +  + + +P L+I D
Sbjct: 391 HRLMAKRAAQERVREMLMQVELTPAEAYLHRYPHALSGGQRQRVAIARALITHPQLVICD 450

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E  S LD   Q  V+ L+   ++E +  + +F+THDLA+ R+  DRV VMY GK+VE+ P
Sbjct: 451 EPVSMLDAHIQAQVLALMQE-LKEQLQLTYLFITHDLAIARRFCDRVAVMYRGKIVELAP 509

Query: 236 MEEVLENPAHPYTQLLL 252
             ++  +P HPYTQ LL
Sbjct: 510 TAQLFAHPQHPYTQKLL 526


>pir||T35983 probable peptide transport ATP-binding protein - Streptomyces
           coelicolor >gi|4464268|emb|CAB37471.1| (AL035559)
           putative peptide transport ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 359
           
 Score =  178 bits (447), Expect = 8e-44
 Identities = 124/335 (37%), Positives = 166/335 (49%), Gaps = 41/335 (12%)

Query: 3   LLDVRNLRVYY--RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           LL VR L V +  R      RAVDGV  ++  GE+  + GESGCGK+TL  SL+    P 
Sbjct: 32  LLSVRGLHVTFPGRRGAAAARAVDGVDLDIRRGEIVALVGESGCGKTTLARSLLGLVRPT 91

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
              GG   F G  L    R    K       ++ Q    +LNP   + DIV +  R HG+
Sbjct: 92  ---GGRVTFDGAPLGYSAR--ALKAYRRRAQLVLQDPSGSLNPRHTVYDIVAEGLRIHGH 146

Query: 121 ADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
           A   +    + E LS   L P  R    YP ELSGG RQR  +  + +L P+LL+ADE  
Sbjct: 147 AG--DERTAVAEALSRAGLRPPERFFLRYPHELSGGQRQRVVIAGALVLQPELLVADEPV 204

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           ++LD + +  ++ LL     E +  S + VTHDL L   IADRV VMY G++VE G +E+
Sbjct: 205 ASLDASVRGEILALLLRLRTE-LGLSALVVTHDLGLAWNIADRVAVMYLGRIVETGAVEQ 263

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPK-------GCRFYTRCP 291
           VL  P HPYTQ LL+ LP              PG P+ L   P        GCRF+ RCP
Sbjct: 264 VLTAPRHPYTQALLSVLPE------------APGAPVVLTGEPPDPSYIPGGCRFHVRCP 311

Query: 292 F----------AMEDCRDVEPKLVKVGRDHYAACH 316
                        + CR+ E ++++ G +   ACH
Sbjct: 312 VLASGEAVRAGVADACRNEELEILRGGDESQVACH 346


>pir||H71951 dipeptide transport system dipeptide transport system ATP-binding
           protein - Helicobacter pylori (strain J99)
           >gi|4154800|gb|AAD05856.1| (AE001465) DIPEPTIDE
           TRANSPORT SYSTEM DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING
           PROTEIN [Helicobacter pylori J99]
           Length = 287
           
 Score =  176 bits (442), Expect = 3e-43
 Identities = 104/274 (37%), Positives = 167/274 (59%), Gaps = 8/274 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +L+V++L+ Y+ T  G  +AVDGVSF + + +   + GESG GKS    S++ L + P +
Sbjct: 2   ILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEKPGK 61

Query: 62  YKGGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRIKDIVWDLAR-EHG 119
             GGS  F G+DL+ L   +++K I+  ++ +I Q  M +LNP+  +   + ++ +  H 
Sbjct: 62  IVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVLKIHHP 121

Query: 120 YADRREVEELLRERLSMVKLSPRVADMY---PVELSGGMRQRATMVVSTLLNPDLLIADE 176
             +++E  E +   L  V + P   D Y   P  LSGG RQR  + ++ +  P++LIADE
Sbjct: 122 SLNKKERLERVVYELERVGI-PHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADE 180

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ALDVT Q  ++EL+    Q+    SI+F+THDL ++ QIAD V+VMY G VVE    
Sbjct: 181 PTTALDVTIQAQILELMKELQQKKGT-SILFITHDLGVVAQIADEVVVMYKGHVVEQASA 239

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGI 270
           +E+  +P HPYT+ LLN++P+ G  Y+++RL  +
Sbjct: 240 KELFADPRHPYTKALLNAIPKPGKEYRKKRLETV 273


>pir||C72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981011|gb|AAD35585.1|AE001726_19 (AE001726)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 384
           
 Score =  176 bits (442), Expect = 3e-43
 Identities = 102/259 (39%), Positives = 148/259 (56%), Gaps = 4/259 (1%)

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E KG    F    L  LP  E RK    E+ I+ Q   ++LNP  R+K IV +    H  
Sbjct: 127 EAKGSPKKFMSILLDDLP--EKRKKFRREMQIVFQDPYSSLNPRLRVKSIVGEGIVTHRI 184

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           A  +EVE+ ++E L  V +       +P E SGG RQR  +  +  L P L++ADE  +A
Sbjct: 185 ARGKEVEKRIKEILEDVGIPSAYVYRFPHEFSGGQRQRIGIARALALEPKLVVADEAVAA 244

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LDV+ +  +I L+    +E  + + IF++HDLA+++ I+DR+ VMY GK+VE+ P +++ 
Sbjct: 245 LDVSIRSQIINLMEDLQREHKL-TYIFISHDLAVVKHISDRIGVMYLGKMVELAPKKDLF 303

Query: 241 ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDV 300
           E P HPYT  L++++P      KRER+  + G   S +NPP GCRF+TRCP A E C   
Sbjct: 304 EKPLHPYTVALMSAIPVPDPTKKRERII-LKGDVPSPINPPSGCRFHTRCPIAKEICSKE 362

Query: 301 EPKLVKVGRDHYAACHLLG 319
           EP   +V   H+ ACH  G
Sbjct: 363 EPAFREVEEGHFVACHFPG 381


>sp|P18765|AMIE_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN AMIE
           >gi|98018|pir||S11152 oligopeptide transport protein
           amiE - Streptococcus pneumoniae
           >gi|47346|emb|CAA35216.1| (X17337) AmiE protein
           [Streptococcus pneumoniae]
           Length = 355
           
 Score =  175 bits (440), Expect = 5e-43
 Identities = 117/323 (36%), Positives = 179/323 (55%), Gaps = 13/323 (4%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           +L  R++ V +      + A+ GVS E+ EGEV  + GESG GKS L  +    +  +E 
Sbjct: 8   ILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTF---RGMLEE 64

Query: 63  KG----GSAIFKGRDLMSLP-RDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE 117
            G    GS  ++G+DL +L    +  +I+ ++++ I Q  M +L+P K I   + ++  +
Sbjct: 65  NGRIAEGSIDYRGQDLTALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVK 124

Query: 118 HGYADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
           H     +E +EL  + ++ V +  + R  + YP + SGGMRQR  + ++    PD+LI D
Sbjct: 125 HQGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQYSGGMRQRIVIAIALACRPDVLICD 184

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E T+ALDVT Q  +I+LL     E    +I F+THDL ++  IAD+V VMYAG++VE G 
Sbjct: 185 EPTTALDVTIQAQIIDLLKSLQNEYHFTTI-FITHDLGVVASIADKVAVMYAGEIVEYGT 243

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAME 295
           +EEV  +P HPYT  LL+SLP++     +  L  IPG P SL    KG  F  R  +AM+
Sbjct: 244 VEEVFYDPRHPYTWSLLSSLPQLA--DDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQ 301

Query: 296 DCRDVEPKLVKVGRDHYAACHLL 318
              + +     V   H+A   LL
Sbjct: 302 IDFEQKAPQFSVSETHWAKTWLL 324


>pir||C72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980563|gb|AAD35169.1|AE001694_5 (AE001694)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 320
           
 Score =  175 bits (439), Expect = 7e-43
 Identities = 107/315 (33%), Positives = 174/315 (54%), Gaps = 14/315 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVR----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           M LL+++NL   +     + R    AVD V+F++ E E+F +AGESGCGK+T    ++  
Sbjct: 1   MPLLEIKNLTKIFTIGSIFSRTRIVAVDNVNFDINEAEIFTLAGESGCGKTTTAKIILGF 60

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDEL-RKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
           + P     G  I+KGR +  + ++E  R+    E+  + Q   +  NP +++    ++  
Sbjct: 61  EEPTS---GEIIYKGRKIDRVHQNEKERRELLKEIQAVFQNPFSTFNPLRKVDRYFYETL 117

Query: 116 REHGYAD-RREVEELLRERLSMVKLS-PRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
              G AD +++ EE+++E+LS V +S    ++ YP E SGG  QR ++  + L NP LL+
Sbjct: 118 FNLGIADTKKKAEEIIKEKLSAVGISFEEFSEKYPSEFSGGQLQRISIARALLTNPSLLV 177

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE  S +D + +  ++ L     ++  V S++++THDL     ++DR+ VM+ G +VE+
Sbjct: 178 ADEPVSMVDASLRMSIVNLFKDLKEQYGV-SVLYITHDLTTAYYVSDRIAVMFRGNIVEL 236

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMGVHYKRE-RLSGIPGYPISLLNPPKGCRFYTRCPF 292
           GP E+VL  P HPYTQLL  S+P      K + R+          L   +GC+F  RCP 
Sbjct: 237 GPAEKVLMEPKHPYTQLLRESVPEPDPKKKWDIRIKLSETEQAEYLR--QGCKFAGRCPK 294

Query: 293 AMEDCRDVEPKLVKV 307
           AM+ CR   P   +V
Sbjct: 295 AMDICRKEPPPYFEV 309


>gi|10954710 hypothetical ABC-transporter gene~similar to moaD gene
           [Agrobacterium rhizogenes] >gi|8918710|dbj|BAA97775.1|
           (AB039932) hypothetical ABC-transporter gene~similar to
           moaD gene [Agrobacterium rhizogenes]
           >gi|10567374|dbj|BAB16183.1| (AP002086) hypothetical
           ABC-transporter gene~similar to moaD gene [Agrobacterium
           rhizogenes]
           Length = 603
           
 Score =  175 bits (439), Expect = 7e-43
 Identities = 113/300 (37%), Positives = 163/300 (53%), Gaps = 14/300 (4%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLPR 79
           V+AV  VSF V  GE FG+ GESGCGKSTL   L   + P     G   F G++L +L  
Sbjct: 302 VKAVRDVSFTVKAGENFGIVGESGCGKSTLTRLLAWLEQP---NAGRIAFLGKNLSNLSA 358

Query: 80  DELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSMVKL 139
             L +++ S   ++ Q    +L     I  ++ +    HG A RR+ E+  +E +  V L
Sbjct: 359 RSLTEMRKS-FQLLLQDPYGSLPAGMSIIRMIEEPLLIHGVA-RRDAEQRAQEAMREVGL 416

Query: 140 SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQE 199
              +A+  PV LS G RQR  +  + +L P LLI DE  SALD   Q  +++L    +Q 
Sbjct: 417 HADLAERLPVGLSAGQRQRINIARALVLKPRLLILDETLSALDQVEQAELLDLFKR-LQA 475

Query: 200 GIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMG 259
               S IF++HDLAL+R+I  RV VMY G++VE+   + + E+P HPYT+ LL+++P + 
Sbjct: 476 AHGFSYIFISHDLALVRRICHRVAVMYLGRIVELADNKTLFEHPHHPYTRALLSAMPTL- 534

Query: 260 VHYKRERLSG----IPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAAC 315
              +  R  G    + G P S ++ P GC F +RCP A  DC   +P L      +YAAC
Sbjct: 535 ---EENRFPGAQYLLDGEPPSPIHLPVGCSFRSRCPRAQSDCEKTDPMLEGSDGGNYAAC 591


 Score =  133 bits (332), Expect = 2e-30
 Identities = 87/258 (33%), Positives = 138/258 (52%), Gaps = 5/258 (1%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR-KPPME 61
           +L V NL V         R VD V F +  GEV G+ GE+G GKS L  +++   + P++
Sbjct: 5   ILAVSNLSVDLLRDGSKRRIVDNVDFALQPGEVLGLVGEAGSGKSVLARAMVNAIQAPLD 64

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLAREHGY 120
              G  IF+G+D++SL    LR I+ + +  I    M +L+P   I   IV  L      
Sbjct: 65  ISSGQVIFEGKDVLSLDARGLRSIRGNRIGFIGANPMGSLDPRLPIGHQIVEKLRSVRPD 124

Query: 121 ADRREVEELLRERLSMVKL-SPRVA-DMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             + E +E + + L  V + SPR      P + SGGM QR  +V + +  P L+IAD IT
Sbjct: 125 IGKAEAKEKVLDLLGRVHIPSPRSRFHEAPFQFSGGMMQRVMIVDALVSEPSLVIADNIT 184

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
             LDVT    +I L+ + ++E +  + +F++  L ++ +IA+R +VM  G++VE G   +
Sbjct: 185 QPLDVTVAAQIIRLIDN-LRESLDTAFLFISSSLPVVSKIAERTLVMQGGRIVEQGETAD 243

Query: 239 VLENPAHPYTQLLLNSLP 256
           +  NP   YT+ LL+ +P
Sbjct: 244 IAANPQQAYTRALLSRIP 261


>pir||E64557 dipeptide transport ATP-binding protein dppD - Helicobacter pylori
           (strain 26695) >gi|2313399|gb|AAD07370.1| (AE000548)
           dipeptide ABC transporter, ATP-binding protein (dppD)
           [Helicobacter pylori 26695]
           Length = 287
           
 Score =  175 bits (438), Expect = 9e-43
 Identities = 103/274 (37%), Positives = 167/274 (60%), Gaps = 8/274 (2%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPME 61
           +L+V++L+ Y+ T  G  +AVDGVSF + + +   + GESG GKS    S++ L + P +
Sbjct: 2   ILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEKPGQ 61

Query: 62  YKGGSAIFKGRDLMSLPRDELRK-IQYSELSIIPQYAMNALNPTKRIKDIVWDLAR-EHG 119
             GGS  F G+DL+ L   +++K I+  ++ +I Q  M +LNP+  +   + ++ +  H 
Sbjct: 62  IVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVLKIHHP 121

Query: 120 YADRREVEELLRERLSMVKLSPRVADMY---PVELSGGMRQRATMVVSTLLNPDLLIADE 176
             +++E  E +   L  V + P   D Y   P  LSGG RQR  + ++ +  P++LIADE
Sbjct: 122 NLNKKERLERVVYELERVGI-PHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADE 180

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ALDVT Q  ++EL+    Q+    SI+F+THDL ++ QIAD V+VMY G VVE    
Sbjct: 181 PTTALDVTIQAQILELMKELQQKKGT-SILFITHDLGVVAQIADEVVVMYKGHVVEQASA 239

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGI 270
           +E+  +P HPYT+ LL+++P+ G  Y+++RL  +
Sbjct: 240 KELFADPRHPYTKALLSAIPKPGKEYRKKRLETV 273


>pir||A72282 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981772|gb|AAD36294.1|AE001778_15 (AE001778)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 315
           
 Score =  175 bits (438), Expect = 9e-43
 Identities = 118/323 (36%), Positives = 180/323 (55%), Gaps = 21/323 (6%)

Query: 1   MALLDVRNLRVYYRTPVGY-----VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           M+LL V+NL   +  P+G+     ++AVD VSFE+    +  + GESG GK+T V  LIL
Sbjct: 1   MSLLKVQNLTKEF--PLGFFGKERLKAVDDVSFEIERSRIVSLIGESGSGKTT-VGKLIL 57

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
           +   +    G  +  GRD+  +   ELR+  Y ++  + Q   ++ NP  +I D V D+ 
Sbjct: 58  KL--IRPSSGQILLNGRDITQIKGRELREY-YRKVQGVFQDPFSSFNPIYKI-DRVLDMV 113

Query: 116 REHGYADRREVEEL--LRERLSMVKLSPR-VADMYPVELSGGMRQRATMVVSTLLNPDLL 172
            E  + D    E    + E ++ V ++PR +   YP +LSGG  QR  +  + LLN +LL
Sbjct: 114 FEEFFPDTPASERRTKMEEVIASVGMNPREILGKYPHQLSGGQLQRILIARTLLLNVELL 173

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           IADEI S LD +T+  ++ LL    + G+  S+IF+THDL+L   I+D   +MY G +VE
Sbjct: 174 IADEIISMLDASTRVDILNLLGDLRERGM--SVIFITHDLSLGYYISDETFIMYRGNIVE 231

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPF 292
           +G  E+V  NP HPYT++LL S+P +   +   +   IP   +S  N P  C++Y RCP 
Sbjct: 232 MGDTEKVFHNPIHPYTKMLLESVPEIDRKWDLSK-RFIPEL-VSSSNAP--CKYYDRCPI 287

Query: 293 AMEDCRDVEPKLVKVGRDHYAAC 315
             E C   +P +V+V  +H   C
Sbjct: 288 RDERCLVQKPAMVEVEENHKVLC 310


>sp|P47325|OPPD_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|1361734|pir||G64208 oligopeptide transport
           ATP-binding protein amiE - Mycoplasma genitalium
           >gi|1045756|gb|AAC71297.1| (U39688) oligopeptide ABC
           transporter, ATP-binding protein (oppD) [Mycoplasma
           genitalium]
           Length = 402
           
 Score =  174 bits (437), Expect = 1e-42
 Identities = 108/356 (30%), Positives = 186/356 (51%), Gaps = 43/356 (12%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           +LD+ +L V ++   G + AV G+  +V  G + G+ GESG GKS  V S+I      + 
Sbjct: 21  ILDITDLHVNFKVKDGILHAVRGIDLKVERGSIVGIVGESGSGKSVSVKSIIGFNDNAQT 80

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPT----KRIKDIVWDLAREH 118
           K     FK  D+  L + + +  + + +S I Q  + +LNPT    K++K+ ++  ++  
Sbjct: 81  KAKLMNFKNVDITKLKKHQWKYYRGTYVSYISQDPLFSLNPTMTIGKQVKEAIYVASKRR 140

Query: 119 GYADR---------------------REVEELLRERLSMVKLSPRVADM----------- 146
            +  +                     +E+++  ++++  + +  +  ++           
Sbjct: 141 YFQAKSDLKFALSNKEIDKKTYKSKLKEIKQTYQQKIKPINVEKKTLEILQFIGINDAKK 200

Query: 147 ----YPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIV 202
               +P E SGGMRQR  + ++    PDL+IADE T+ALDVT Q  V+ L+   +++ + 
Sbjct: 201 RLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKVLTLIKQ-LRDLLN 259

Query: 203 KSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHY 262
            +IIF++H+++L+    D V VMYAGK+VE G +EE+  NP HPYT  L++S+P      
Sbjct: 260 ITIIFISHNISLIANFCDFVYVMYAGKIVEQGLVEEIFTNPLHPYTWALISSIPEQ--KD 317

Query: 263 KRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAACHLL 318
           K + L+ IPG   ++L PPKG  F +R  +A+    +  P   +V + H AA  LL
Sbjct: 318 KNKPLTSIPGVIPNMLTPPKGDAFASRNQYALAIDFEYHPPFFEVTKTHKAATWLL 373


>sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|1075085|pir||B64184 oligopeptide transport
           ATP-binding protein oppF - Haemophilus influenzae
           (strain Rd KW20) >gi|1574675|gb|AAC22774.1| (U32792)
           oligopeptide ABC transporter, ATP-binding protein (oppF)
           [Haemophilus influenzae Rd]
           Length = 332
           
 Score =  173 bits (434), Expect = 3e-42
 Identities = 104/298 (34%), Positives = 166/298 (54%), Gaps = 7/298 (2%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLPR 79
           ++AV  VSF++  GE  GV GESGCGKSTL  ++I     +E   G  ++ G+ L     
Sbjct: 36  LKAVKDVSFKLYAGETLGVVGESGCGKSTLARAII---GLVEASEGEILWLGKHLRKQSA 92

Query: 80  DELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD-LAREHGYADRREVEELLRERLSMVK 138
            + ++ +  ++ +I Q  + +LNP   I +I+ + L     +    EV+E ++  +  V 
Sbjct: 93  KQWKETR-KDIQMIFQDPLASLNPRMNIGEIIAEPLKIYQPHLSAAEVKEKVQAMMLKVG 151

Query: 139 LSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQ 198
           L P + + YP E SGG  QR  +  + ++ P ++I DE  SALDV+ Q  V+ LL    +
Sbjct: 152 LLPNLINRYPHEFSGGQCQRIGIARALIIEPKMIICDEPVSALDVSIQAQVVNLLKSLQK 211

Query: 199 EGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRM 258
           E +  S+IF+ HDLA+++ I+DRV+VMY G  +E+G   EV  +  HPYT+ L++++P  
Sbjct: 212 E-MGLSLIFIAHDLAVVKHISDRVLVMYLGNAMELGSDVEVYNDTKHPYTKALMSAVPIP 270

Query: 259 GVHYKRER-LSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAAC 315
               +R + +  + G   S +NPP GC F TRC  A E+C   +P        H+ AC
Sbjct: 271 DPKLERNKSIELLEGDLPSPINPPSGCVFRTRCLKADENCAKQKPPFTSQNNSHFVAC 328


>sp|P36636|SAPD_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPD
           >gi|628820|pir||S39588 peptide transport system
           ATP-binding protein sapD - Salmonella typhimurium
           >gi|414211|emb|CAA52287.1| (X74212) sapD [Salmonella
           typhimurium]
           Length = 330
           
 Score =  171 bits (429), Expect = 1e-41
 Identities = 110/328 (33%), Positives = 177/328 (53%), Gaps = 18/328 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LLD+RNL + ++T  G+V+AVD VS  + EGE+ G+ GESG GKS +  ++  + K  
Sbjct: 1   MPLLDIRNLTIEFKTSEGWVKAVDRVSMTLSEGEIRGLVGESGSGKSLIAKAICGVAKDN 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLA--- 115
                    F   DL+ L   E RK+    +S+I Q   + L+P++R+ + ++ ++    
Sbjct: 61  WRVTADRMRFDDIDLLRLSSRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT 120

Query: 116 ------REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNP 169
                 +  G+  RR +E L R  +   K   R    +P EL+ G  Q+  + ++    P
Sbjct: 121 YKGRWWQRLGWRKRRAIELLHRVGIKDHKEPMR---SFPYELTDGECQKVMIAIALANQP 177

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            LLIADE T++++ TTQ  +  LL    Q     +I+ ++HDL +L Q AD++ V+Y G+
Sbjct: 178 RLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNT-TILLISHDLQMLSQWADKINVLYCGQ 236

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMG-VHYKRERLSGIPGYPISLLNPPKGCRFYT 288
            VE  P ++++  P HPYTQ L+ ++P  G     + RL+ +PG    L   P GCR   
Sbjct: 237 TVETAPSKDLVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGP 296

Query: 289 RCPFAMEDCRDVEPKLVKVGRDHYAACH 316
           RCP+A  +C  + P+L    ++H  ACH
Sbjct: 297 RCPYAQREC-IITPRLTG-AKNHLYACH 322


>emb|CAA10912.1| (AJ222649) sapD [Erwinia chrysanthemi]
           Length = 330
           
 Score =  171 bits (429), Expect = 1e-41
 Identities = 108/328 (32%), Positives = 174/328 (52%), Gaps = 18/328 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           MALL++RN+ + + TP G V+AVD VS  + EGE+ G+ GESG GKS +  ++  + K  
Sbjct: 1   MALLEIRNVTIEFLTPDGPVKAVDRVSINLNEGEIRGLVGESGSGKSLIAKAICGINKEN 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLA--- 115
                    F   D++ L   + RK+    +S+I Q   + L+P+ R+ + ++  +    
Sbjct: 61  WRITADRFRFDDVDMLQLTPPQRRKLVRHNMSMIFQEPQSCLDPSARVGRQLIQSIPGWT 120

Query: 116 ------REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNP 169
                 +   +  RR +E L R     +K    V   +P EL+ G  Q+  + ++    P
Sbjct: 121 YKGRWWQRFNWRKRRAIELLHRVG---IKDHKDVMRSFPYELTEGECQKVMIAIALANQP 177

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            LLIADE  +A++ TTQ  +  LL    Q     +I+ ++HDL  + + ADR+ V+Y G+
Sbjct: 178 RLLIADEPNNAMEATTQAQIFRLLSRLNQNNNT-TILLISHDLQTMSKWADRINVLYCGQ 236

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHY-KRERLSGIPGYPISLLNPPKGCRFYT 288
            VE    +E++  P HPYTQ L+ ++P  G     + RL+ +PG   SL + P GCR   
Sbjct: 237 TVESAVSDELISAPHHPYTQALIRAMPDFGCSLPHKSRLNTLPGAIPSLAHLPVGCRLGP 296

Query: 289 RCPFAMEDCRDVEPKLVKVGRDHYAACH 316
           RCP++ + C    P L+ V R+H+ ACH
Sbjct: 297 RCPYSQKQCM-TAPPLIPV-RNHWYACH 322


>pir||F71483 probable dipeptide transport - Chlamydia trachomatis  (serotype D,
           strain UW3/Cx) >gi|3329143|gb|AAC68285.1| (AE001339) ABC
           Transport ATPase [Chlamydia trachomatis]
           Length = 321
           
 Score =  171 bits (428), Expect = 1e-41
 Identities = 109/319 (34%), Positives = 173/319 (54%), Gaps = 9/319 (2%)

Query: 3   LLDVRNLRVYY-RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           LL V+NL V   R  V ++ AVD +SF+V  G+   + GESG GKS    SL+   P   
Sbjct: 6   LLQVKNLSVSLNRNRVSFL-AVDSLSFDVFPGQTLAIIGESGSGKSITAQSLMQLLPEEN 64

Query: 62  YK-GGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH-G 119
           +   G A+F   +L+       + +  S++S+I Q  + + +P   I+    ++ R H G
Sbjct: 65  FSLSGEALFNKENLLDRKNTNAKVLFGSKISMIFQNPLASFDPVFTIEQQFHEVIRTHLG 124

Query: 120 YADRREVEELLRERLSMVKLSP-RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            +++   E++L          P R   +YP ELSGGM QR  + ++ L +PDLLIADE T
Sbjct: 125 ISNKMAHEQMLAVLRETGFQDPERCIKLYPHELSGGMLQRMAIAMTLLTSPDLLIADEPT 184

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDV+ Q  +++LL   +Q+    S++ +THD+ ++ ++AD V V+YAG++ E   ++E
Sbjct: 185 TALDVSVQYQILQLLKT-LQKKTGMSLLIITHDMGVVAEMADDVFVLYAGRMAEYSSVQE 243

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +  +PAHPYT+ LL S P     Y+++    I G P    + PKGC +  RC  A   C 
Sbjct: 244 IFHSPAHPYTEDLLASRPS---QYRQQTFVPIAGQPPHYTSLPKGCCYSPRCRKAQPICF 300

Query: 299 DVEPKLVKVGRDHYAACHL 317
           +  P  + +   H   C L
Sbjct: 301 EKSPDSLSLNDHHRVRCWL 319


>sp|P75552|OPPD_MYCPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|2146480|pir||S73940 oligopeptide transport
           ATP-binding protein oppD - Mycoplasma pneumoniae (strain
           ATCC 29342) >gi|1674316|gb|AAB96262.1| (AE000058)
           oligopeptide transport ATP-binding protein OppD
           [Mycoplasma pneumoniae]
           Length = 423
           
 Score =  170 bits (427), Expect = 2e-41
 Identities = 112/356 (31%), Positives = 183/356 (50%), Gaps = 43/356 (12%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           +LD+R+L V ++   G ++AV GV  +V +G + G+ GESG GKS  V S+I      + 
Sbjct: 21  ILDIRDLHVSFKVKDGIMQAVRGVDLKVKKGSIVGIVGESGSGKSVCVKSIIGFNDGAKT 80

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPT----KRIKDIVWDLAREH 118
                 FK  D+  + + + +  + + +S I Q  + +LNPT    +++K+ ++   +  
Sbjct: 81  TAKLMNFKNIDISKMKKHQWQYYRGTYVSYISQDPLFSLNPTMTIGRQVKEAIYVSCKRR 140

Query: 119 GYADRREVE-ELLRERLSMVKLSPRVADM------------------------------- 146
            Y  + +++ +L  ER+ +     ++A                                 
Sbjct: 141 YYQTKSDLKYDLQTERIDLDTYKEKLAQAKETYKAKTTKAAVHAKTLEILNFIGIDQAEK 200

Query: 147 ----YPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQEGIV 202
               +P E SGGMRQR  + ++    PDL+IADE T+ALDVT Q   + L+   +++ + 
Sbjct: 201 RLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKALNLIKQ-LRDLLN 259

Query: 203 KSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHY 262
            +IIF++H+++L+    D V VMYAG++VE G +EE+  NP HPYT  L+ S+P  G   
Sbjct: 260 ITIIFISHNISLIANFCDFVYVMYAGRLVEKGLVEEIFTNPVHPYTWALMASIPE-GTD- 317

Query: 263 KRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAACHLL 318
           K   L+ IPGY  ++L+PPKG  F  R  FA+    + +P    V   H AA  LL
Sbjct: 318 KNAPLTSIPGYIPNMLSPPKGDAFAARNQFALAIDFEHQPPFFDVTETHKAATWLL 373


>sp|P36635|SAPD_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPD
           >gi|7445933|pir||F64877 peptide transport system
           ATP-binding protein sapD - Escherichia coli
           >gi|1279403|emb|CAA65940.1| (X97282) SapD protein
           [Escherichia coli] >gi|1742104|dbj|BAA14844.1| (D90766)
           Peptide transport system ATP-binding protein SapD
           (fragment). [Escherichia coli]
           >gi|1742113|dbj|BAA14852.1| (D90767) Peptide transport
           system ATP-binding protein SapD (fragment). [Escherichia
           coli] >gi|1742122|dbj|BAA14861.1| (D90768) Peptide
           transport system ATP-binding protein SapD (fragment).
           [Escherichia coli] >gi|1787548|gb|AAC74373.1| (AE000227)
           putative ATP-binding protein of peptide transport system
           [Escherichia coli K12]
           Length = 330
           
 Score =  169 bits (424), Expect = 4e-41
 Identities = 111/328 (33%), Positives = 177/328 (53%), Gaps = 18/328 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LLD+RNL + ++T   +V+AVD VS  + EGE+ G+ GESG GKS +  ++  + K  
Sbjct: 1   MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDN 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLA--- 115
                    F   DL+ L   E RK+    +S+I Q   + L+P++R+ + ++ ++    
Sbjct: 61  WRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT 120

Query: 116 ------REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNP 169
                 +  G+  RR +E L R  +   K + R    +P EL+ G  Q+  + ++    P
Sbjct: 121 YKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR---SFPYELTEGECQKVMIAIALANQP 177

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            LLIADE T++++ TTQ  +  LL    Q     +I+ ++HDL +L Q AD++ V+Y G+
Sbjct: 178 RLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNT-TILLISHDLQMLSQWADKINVLYCGQ 236

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMG-VHYKRERLSGIPGYPISLLNPPKGCRFYT 288
            VE  P +E++  P HPYTQ L+ ++P  G     + RL+ +PG    L   P GCR   
Sbjct: 237 TVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGP 296

Query: 289 RCPFAMEDCRDVEPKLVKVGRDHYAACH 316
           RCP+A  +C  V P+L    ++H  ACH
Sbjct: 297 RCPYAQREC-IVTPRLTG-AKNHLYACH 322


>gb|AAD48155.1|AF086619_1 (AF086619) ABC transporter homolog [Loofah witches'-broom
           phytoplasma]
           Length = 264
           
 Score =  169 bits (424), Expect = 4e-41
 Identities = 88/263 (33%), Positives = 154/263 (58%), Gaps = 4/263 (1%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M +L+V NL  Y+ T  G V+AV G+SF + +G+  G+ GESG GKS   +S++ L +  
Sbjct: 1   MKILEVNNLHTYFETEKGLVKAVQGISFYLEQGKTLGLVGESGSGKSQTANSILKLFEKT 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
            +   G  IF  + +      +++KI+  E+S+I Q  + +LNP  +IKD + ++   H 
Sbjct: 61  QKIHQGEIIFNNQVISDFNEKKMQKIRGKEISMIFQDPITSLNPMFKIKDQIMEILFIHQ 120

Query: 120 YADRREVEELLRERLSMVKLS--PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
               +E  E     L   K+    ++ + YP +LSGGM QR  + ++ +  P LLI DE 
Sbjct: 121 EITYKEAYEKALNMLKKTKIHNCEQIMNCYPYQLSGGMCQRVMIAIALICQPKLLIVDEA 180

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T ALDV  Q+ ++ L+    +E    +++F++HDL+++ +I+D ++VM  GK++E    +
Sbjct: 181 TIALDVIVQKEILNLIKEMQKENQT-AVLFISHDLSVISEISDDIIVMLKGKIIEKASTQ 239

Query: 238 EVLENPAHPYTQLLLNSLPRMGV 260
           ++L++P HPYT+ LLN+  +  +
Sbjct: 240 QILKDPKHPYTRTLLNNFLKTSI 262


>gi|10954941 Probable accB [Agrobacterium tumefaciens]
           >gi|6498294|dbj|BAA87746.1| (AB016260) Probable accB
           [Agrobacterium tumefaciens]
           Length = 321
           
 Score =  169 bits (423), Expect = 5e-41
 Identities = 116/318 (36%), Positives = 168/318 (52%), Gaps = 18/318 (5%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL VR+L V  + P   +  ++GVSF +  G+  G+ GESGCGKS   +++    P    
Sbjct: 13  LLTVRDLVV--QVPARDITIINGVSFSLDAGQTLGLVGESGCGKSMTCYAIAKALPRGIS 70

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH---- 118
           + G  I    +L S P+ + +      +++I Q   ++LNP   I   +      H    
Sbjct: 71  QTGGTI----ELNSGPKADGKPA----IAMIYQDPTSSLNPVHSIGYYLESSLYRHQGLE 122

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
           G   R E   LL ER+ + +   R+   YP E SGGM QR  +   +L  P L+IADE T
Sbjct: 123 GNDARLEAMRLL-ERVGIDRAKSRLRS-YPHEFSGGMNQRVMIATRSLAKPKLMIADEPT 180

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVTTQ  ++ LL     E  + +++ V+HDL ++ ++ADR  VMY GK+VE  P+ E
Sbjct: 181 TALDVTTQAQILHLLEELRSETGM-ALLIVSHDLGVIARLADRAAVMYCGKIVETAPVAE 239

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +LE+ AHPY + L+  +P +      E    IPG    L N P GC ++ RCP A E C 
Sbjct: 240 LLEHAAHPYARALIGCMPTIDAD-DLEPPVPIPGSVPLLDNLPAGCYYHPRCPRASEQCS 298

Query: 299 DVEPKLVKVGRDHYAACH 316
              P  V VG  H AAC+
Sbjct: 299 VSFPGPVNVGAFHDAACY 316


>gb|AAF28110.1|AF153317_2 (AF153317) SapD [Shigella dysenteriae]
           Length = 330
           
 Score =  166 bits (416), Expect = 3e-40
 Identities = 110/328 (33%), Positives = 176/328 (53%), Gaps = 18/328 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LLD+RNL + ++T   +V+AVD VS  + EGE+ G+ GESG GKS +  ++  + K  
Sbjct: 1   MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDN 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLA--- 115
                    F   DL+ L   E RK+    +S+I Q   + L+P++R+ + ++ ++    
Sbjct: 61  WRVTADRMRFDDIDLLGLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT 120

Query: 116 ------REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNP 169
                 +   +  RR +E L R  +   K + R    +P EL+ G  Q+  + ++    P
Sbjct: 121 YKGRWWQRFVWRKRRAIELLHRVGIKDHKDAMR---SFPYELTEGECQKVMIAIALANQP 177

Query: 170 DLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            LLIADE T++++ TTQ  +  LL    Q     +I+ ++HDL +L Q AD++ V+Y G+
Sbjct: 178 RLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNT-TILLISHDLQMLSQWADKINVLYCGQ 236

Query: 230 VVEIGPMEEVLENPAHPYTQLLLNSLPRMG-VHYKRERLSGIPGYPISLLNPPKGCRFYT 288
            VE  P +E++  P HPYTQ L+ ++P  G     + RL+ +PG    L   P GCR   
Sbjct: 237 TVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGP 296

Query: 289 RCPFAMEDCRDVEPKLVKVGRDHYAACH 316
           RCP+A  +C  V P+L    ++H  ACH
Sbjct: 297 RCPYAQREC-IVTPRLTG-AKNHLYACH 322


>pir||T03431 probable transport protein accB - Agrobacterium tumefaciens plasmid
           pTiC58 >gi|3153178|gb|AAC17198.1| (AF010180) AccB
           [Agrobacterium tumefaciens]
           Length = 321
           
 Score =  164 bits (412), Expect = 1e-39
 Identities = 115/318 (36%), Positives = 166/318 (52%), Gaps = 18/318 (5%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL VR+L V  + P   +  ++GVSF +  G+  G+ GESGCGKS   +++    P    
Sbjct: 13  LLTVRDLIV--QVPARDITIINGVSFSLDAGQTLGLVGESGCGKSMTCYAIAKALPRGIS 70

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH---- 118
           + G  I    +L S P+ + +      +++I Q   ++LNP   I   +      H    
Sbjct: 71  QTGGTI----ELDSGPKADGKPA----IAMIYQDPTSSLNPVHSIGYYLESSLYRHQGLE 122

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
           G   R E   LL ER+ + +   R+   YP E SGGM QR  +  +    P L+IADE T
Sbjct: 123 GNDARLEAMRLL-ERVGIDRAKSRLRS-YPHEYSGGMNQRVMIAHALAAKPKLMIADEPT 180

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVTTQ  ++ LL     E  + +++ V+HDL ++ ++ADR  VMY GK+VE  P+ E
Sbjct: 181 TALDVTTQAQILHLLEELRSETGM-ALLIVSHDLGVIARLADRAAVMYCGKIVETAPVAE 239

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCR 298
           +LE  AHPY + L+  +P +      E    IPG    L N P GC ++ RCP A E C 
Sbjct: 240 LLERAAHPYARALIGCMPTIDAD-DLEPPVPIPGSVPLLDNLPAGCYYHPRCPRASEQCS 298

Query: 299 DVEPKLVKVGRDHYAACH 316
              P  V VG  H AAC+
Sbjct: 299 VSFPGPVNVGAFHDAACY 316


>pir||F72049 peptide ABC transporter, ATP-binding protein CP0065 [imported] -
           Chlamydophila pneumoniae (strains CWL029 and AR39)
           >gi|4376983|gb|AAD18821.1| (AE001650) ABC ATPase
           Dipeptide Transport [Chlamydophila pneumoniae CWL029]
           >gi|7189002|gb|AAF37954.1| (AE002170) peptide ABC
           transporter, ATP-binding protein [Chlamydophila
           pneumoniae AR39] >gi|8979054|dbj|BAA98889.1| (AP002547)
           ABC ATPase dipeptide transport [Chlamydophila pneumoniae
           J138]
           Length = 324
           
 Score =  164 bits (412), Expect = 1e-39
 Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 5/298 (1%)

Query: 23  VDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKP-PMEYKGGSAIFKGRDLMSLPRDE 81
           V  +SF + EG+   + GESG GKS   H+++   P P     G   F+G +L++  R  
Sbjct: 26  VQSLSFTINEGQTLAIIGESGSGKSVSAHAILRLLPCPPFSVSGQVNFQGHNLLTASRSI 85

Query: 82  LRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSMVKL-S 140
            +KI  +E+S+I Q    +LNP   I+    ++   H        +E +   L       
Sbjct: 86  QKKIIGTEISMIFQNPQASLNPVFTIEQQFREIIHTHLALTAEVAKEKMLYALEETGFHD 145

Query: 141 PRVA-DMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQE 199
           PR+  ++YP +LSGGM QR  + ++ L +P LLIADE T+ALDV+ Q  +++LL   +Q+
Sbjct: 146 PRLCLNLYPHQLSGGMLQRICIAMALLCSPKLLIADEPTTALDVSVQYQILQLLKT-LQK 204

Query: 200 GIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLPRMG 259
               S++ +TH++ ++ + AD V+V+YAG++VE  P  ++  NP+HPYT+ LL S P + 
Sbjct: 205 KTGMSLLIITHNMGVVAETADDVLVLYAGRMVECAPAVQMFHNPSHPYTRDLLASRPSLQ 264

Query: 260 VHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAACHL 317
              +    + IPG P      P GCR++ RC   +  C    P++  V   H   C L
Sbjct: 265 PQ-QLGSFNPIPGQPPHYTAFPSGCRYHPRCSKILNRCSAEAPEIYPVREGHKVRCWL 321


>pir||C81746 peptide ABC transporter, ATP-binding protein TC0062 [imported] -
           Chlamydia muridarum (strain Nigg)
           >gi|7190098|gb|AAF38947.1| (AE002273) peptide ABC
           transporter, ATP-binding protein [Chlamydia muridarum]
           Length = 321
           
 Score =  162 bits (407), Expect = 4e-39
 Identities = 104/320 (32%), Positives = 169/320 (52%), Gaps = 11/320 (3%)

Query: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEY 62
           LL V+NL V           V+ +SF V  G+   + GESG GKS    SL+   P   +
Sbjct: 6   LLQVKNLSVSLNRNTVSFPVVEDLSFNVFPGQTLAIIGESGSGKSITAQSLMQLLPEEYF 65

Query: 63  KGGSAIFKGRDLMSLPRDELRKIQY-SELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
                 F  ++ +   ++ L K  + S++++I Q  + + +P   I+    ++ R H   
Sbjct: 66  SISGEAFLHKENLLDRKNLLSKTLFGSKMAMIFQNPLASFDPVFTIEQQFHEVIRTHLDL 125

Query: 122 DRREVEE----LLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
            ++   E    +LRE  +  +   R   +YP ELSGGM QR  + ++ L +PDLLIADE 
Sbjct: 126 TKKVAHEQIVTVLRE--TGFQDPERCIKLYPHELSGGMLQRMAIAMTLLTSPDLLIADEP 183

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDV+ Q  +++LL   +Q+    S++ +THD+ ++ ++AD V V+YAG++ E   ++
Sbjct: 184 TTALDVSVQYQILQLL-KTLQKKTGMSLLVITHDMGVVAEMADDVFVLYAGRMAEYSSVQ 242

Query: 238 EVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDC 297
           ++  +PAHPYT+ LL S P     YK++    I G+P    N PKGC +  RC  A+  C
Sbjct: 243 DIFHSPAHPYTKDLLASRPS---QYKKQTFVPISGHPPHYTNLPKGCCYSPRCQKALPIC 299

Query: 298 RDVEPKLVKVGRDHYAACHL 317
               P  + +   H+  C L
Sbjct: 300 YKQSPHAISLNDHHHVRCWL 319


>pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9654573|gb|AAF93346.1| (AE004107) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 571
           
 Score =  161 bits (404), Expect = 8e-39
 Identities = 94/263 (35%), Positives = 151/263 (56%), Gaps = 10/263 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M+LL+V+NLR+ Y +  G   AV  ++ ++  GE+ GV GESG GKST+ +++I L  PP
Sbjct: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
               GG     G  +  L    +R+++ S++  I Q  M +LNP   ++  + +    + 
Sbjct: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 120 YADRREVEELLRERLSMVKLS--PRVAD---MYPVELSGGMRQRATMVVSTLLNPDLLIA 174
                  EE  +  LS++K    P+  +    YP + SGGMRQR  + ++    PDL+IA
Sbjct: 121 QVS---AEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIA 177

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE T+ALDV+ Q  ++ L+    ++  V  ++ VTHD+ ++  + DRV VMY G +VE G
Sbjct: 178 DEPTTALDVSIQDQILNLIRELCKKNNVGCML-VTHDMGVVSNVTDRVAVMYRGDLVEFG 236

Query: 235 PMEEVLENPAHPYTQLLLNSLPR 257
           P  +VL  P HPYT+ L++++PR
Sbjct: 237 PTAKVLGTPEHPYTRSLISAVPR 259


 Score =  148 bits (371), Expect = 6e-35
 Identities = 85/239 (35%), Positives = 135/239 (55%), Gaps = 5/239 (2%)

Query: 19  YVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLP 78
           YV+A + VSF V EGE FG+ GESG GKST+   +     P     G   F+G DL +L 
Sbjct: 325 YVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQP---NAGRVTFEGIDLTALK 381

Query: 79  RDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA-DRREVEELLRERLSMV 137
            +  R+    ++ ++ Q    ++NP  +I DI+ +  R H       E  +++ + L  V
Sbjct: 382 SEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHV 441

Query: 138 KLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFM 197
            L       YP E SGG RQR ++  +    P LLI DE TSALDV+ Q  ++ LL   +
Sbjct: 442 GLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKD-L 500

Query: 198 QEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLP 256
           Q+ +  +++F++HDL ++RQ+ DRV VM  G ++E+ P E++  +P H Y++ L++ +P
Sbjct: 501 QDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559


>pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AAC07884.1|
           (AE000776) ABC transporter [Aquifex aeolicus]
           Length = 251
           
 Score =  161 bits (402), Expect = 1e-38
 Identities = 91/258 (35%), Positives = 153/258 (59%), Gaps = 10/258 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M+LL+V+NL ++YR      + +  VSFEV  GE+  + GESG GKS+++ +++   PP 
Sbjct: 1   MSLLEVKNLNLWYREK----QVLFDVSFEVKIGEILCIVGESGSGKSSILFTILRLLPPY 56

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               GS  F GR+L+ L   E++ I+  E+ ++ Q     L+P   +   + +    H  
Sbjct: 57  ARVSGSVKFLGRELLKLSEREMKSIRGKEVGMVFQEPSLYLDPLFTVGSQIEETYLSHFK 116

Query: 121 ADRREVEELLRERLSMVKLSPRVAD---MYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
           A RRE  E   + +    + P+  +   MYP +LSGG++QR  +  + +  P L++ADE 
Sbjct: 117 AGRREAYEACIKAMKKAGI-PKPEEKYRMYPHQLSGGLKQRVCIANAIVCEPKLVLADEP 175

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T+ALDV+ QR ++ L  +  +EG  K++I +THD  ++ ++ DRV+V+  GKVVE G + 
Sbjct: 176 TTALDVSVQRRILALFRNMKEEG--KAVILITHDFGVVAEVGDRVIVLKDGKVVEEGDVF 233

Query: 238 EVLENPAHPYTQLLLNSL 255
           E+ +NP H YT+ LL+++
Sbjct: 234 EIFDNPKHEYTKKLLSAI 251


>gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T45539 moaD
           protein [imported] - Agrobacterium tumefaciens plasmid
           pTi15955 >gi|2665715|gb|AAB88475.1| (AF242881) moaD
           [Agrobacterium tumefaciens]
           Length = 588
           
 Score =  160 bits (401), Expect = 2e-38
 Identities = 96/258 (37%), Positives = 149/258 (57%), Gaps = 8/258 (3%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           ++L V+NL V +    G  + V  +SF++  G    V GESG GKS    +++   P   
Sbjct: 5   SVLSVKNLNVAF----GKKQVVQDLSFDIAPGSTLAVVGESGSGKSVTSLAIMGLLPVGV 60

Query: 62  YKG-GSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
            K  GS    GR+L+SL   E+  I+  ++S+I Q  M +LNP +++   + +  R H  
Sbjct: 61  AKASGSIQLNGRELLSLSESEMCGIRGGKISMIFQEPMTSLNPVQKVGFQIGEAIRIHRG 120

Query: 121 ADRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
              +E+   + E L  V +  + R  D YP   SGGMRQR  + ++   NP L+IADE T
Sbjct: 121 LRGKELRNAVLEMLKKVGIPDAERRIDNYPHTFSGGMRQRVMIAMALACNPALIIADEPT 180

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALDVT Q  ++ELL    +E  V +++F+THD+ ++ +IADRV+VM  G+VVE GP++ 
Sbjct: 181 TALDVTVQAQILELLKQLQRETNV-ALLFITHDMGVVAEIADRVLVMRGGQVVESGPVDS 239

Query: 239 VLENPAHPYTQLLLNSLP 256
           V   P  PYT++L+ + P
Sbjct: 240 VFTRPESPYTKVLIEAAP 257


 Score =  146 bits (364), Expect = 4e-34
 Identities = 96/263 (36%), Positives = 143/263 (53%), Gaps = 16/263 (6%)

Query: 3   LLDVRNLRVYYRTPV---------GYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           +L+VR+L V  R P+         G V AV+  SF +G+GE  G+ GESG GKST+  ++
Sbjct: 286 ILEVRDLTV--RFPLRGGLLGNVQGNVHAVEKASFAIGKGETLGLVGESGSGKSTIGKAI 343

Query: 54  ILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
           I   P     GGS +  GR +       L  ++  ++ +I Q    +L+  + I   + +
Sbjct: 344 IDLAPRF---GGSIVVDGRTIDYADEKSLAVLR-RDVQMIFQDPFGSLDSRQTIGSAIVE 399

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
               HG A  RE+ E +   L  V L P  A   P E SGG RQR  +  +  ++P L+I
Sbjct: 400 PMYVHGIASGRELREKMEWLLEKVGLDPARASSLPHEFSGGQRQRICIARALSMSPKLII 459

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           ADE  SALDV  +  +IEL+     E  V S +F++HD+A + +I  RV VMY G++VEI
Sbjct: 460 ADEAVSALDVAIKGQIIELMMDLQSEFGV-SYLFISHDMAAVEKICTRVAVMYFGELVEI 518

Query: 234 GPMEEVLENPAHPYTQLLLNSLP 256
           G  + V+  P H YT+ LL+++P
Sbjct: 519 GGRDNVIGRPGHSYTKRLLSAVP 541


>gi|10954942 Probable accC [Agrobacterium tumefaciens]
           >gi|6498295|dbj|BAA87747.1| (AB016260) Probable accC
           [Agrobacterium tumefaciens]
           Length = 339
           
 Score =  158 bits (395), Expect = 1e-37
 Identities = 113/325 (34%), Positives = 162/325 (49%), Gaps = 24/325 (7%)

Query: 3   LLDVRNLRVYYRTPVG-YVR-----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           LL  R +   +R   G +V+     AV+ +  E+   E   V  ESG GKSTL   L+  
Sbjct: 5   LLQARGVTKVFRLKSGLFVKPSVHVAVNSIDLELAPRERVSVVRESGSGKSTLGRLLLGL 64

Query: 57  KPPMEYKGGSAIFKG---RDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
               E   G  +F+G    D  +      RK    E S++ Q  ++ALNP   I + + +
Sbjct: 65  TSTTE---GEVLFEGLAHTDRSARDWSTFRK----ETSLVQQNPLSALNPQMTIGEQIAE 117

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
               H  A+R    +     L  V LS  + + YP ++SGG RQR  +  + +L+P L+I
Sbjct: 118 AVWVHRVANRAGARDRAATMLDRVGLSSAMMNRYPHQMSGGQRQRVVIARALILDPKLVI 177

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            DE  SALDV+ Q  V+ LL    QE +  + +F+THDL ++R + DR++VMY G+VVE 
Sbjct: 178 FDEAVSALDVSVQAQVVALLRQLWQE-LDLAYVFITHDLRIVRHLVDRIVVMYLGRVVET 236

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMG--VHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           G ++ V   P HPYT+ LL S+P M   V      + G     +       GC F +RCP
Sbjct: 237 GDIKSVYAWPRHPYTRALLASVPTMDPTVRNIEPPIKG----ELDAGKVMTGCAFRSRCP 292

Query: 292 FAMEDCRDVEPKLVKVGRDHYAACH 316
           FA+E C    P L   G    AACH
Sbjct: 293 FAIERCAKETPLLRPAG-GQLAACH 316


>pir||F70141 probable oligopeptide transport ATP-binding protein oppF - Lyme
           disease spirochete >gi|2281463|gb|AAC46288.1| (AF000366)
           oligopeptide permease homolog F [Borrelia burgdorferi]
           >gi|2688242|gb|AAC66721.1| (AE001140) oligopeptide ABC
           transporter, ATP-binding protein (oppF) [Borrelia
           burgdorferi]
           Length = 323
           
 Score =  157 bits (392), Expect = 2e-37
 Identities = 93/303 (30%), Positives = 164/303 (53%), Gaps = 23/303 (7%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSLPR 79
           V AV+ VSFEV + +  G+ GESGCGKST + S++    P     G+  F G+++  L +
Sbjct: 33  VNAVNNVSFEVEKNKTLGLVGESGCGKSTTLRSIMQLYTPTS---GNIYFNGKNITKLSK 89

Query: 80  DELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY-----ADRREVEELLRERL 134
            EL K +  ++ ++ Q    +L+P   IK+I+ +    +         ++E+E+ + E  
Sbjct: 90  KELLKTK-KDMQMVFQDPHTSLDPRMTIKEIIAEPLEIYNENKILPKTKQEIEQRVNELT 148

Query: 135 SMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLH 194
            +V L   +   YP E SGG RQR  +  +  LNP LL+ DE  SALDV+ +  ++ LL 
Sbjct: 149 DIVGLHKSMLTRYPHEFSGGQRQRIGIARALALNPKLLLLDEAVSALDVSIRAQILNLLK 208

Query: 195 HFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNS 254
              +E  + S +F++HDLA+++ ++D++ VMY G ++E+ P E +  NP HPYT++L+ S
Sbjct: 209 ALQKEFNL-SYLFISHDLAVVKYMSDKIAVMYLGVILELAPRETLFSNPIHPYTKMLIAS 267

Query: 255 LPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAA 314
           +P +    ++ +   +    ++ +               +     V PKL +V +DH+ +
Sbjct: 268 IPEINPEKRKNKNIKLDEQTLANIR-------------KIHLSTQVHPKLEEVEKDHFVS 314

Query: 315 CHL 317
            +L
Sbjct: 315 KYL 317


>pir||T03432 probable transport protein accC - Agrobacterium tumefaciens plasmid
           pTiC58 >gi|3153179|gb|AAC17199.1| (AF010180) AccC
           [Agrobacterium tumefaciens]
           Length = 338
           
 Score =  156 bits (391), Expect = 3e-37
 Identities = 113/325 (34%), Positives = 163/325 (49%), Gaps = 25/325 (7%)

Query: 3   LLDVRNLRVYYRTPVG-YVR-----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           LL  R +   +R   G +V+     AV+ +  E+   E  GV GESG GKSTL   L+  
Sbjct: 5   LLQARGVTKVFRLKSGLFVKPSVHVAVNSIDLELAPRERVGVVGESGSGKSTLGRLLLGL 64

Query: 57  KPPMEYKGGSAIFKG---RDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
               E   G  +F+G    D  +      RK    E S++ Q  ++ALNP   I + + +
Sbjct: 65  TSTTE---GEVLFEGLAHTDRSARDWSTFRK----ETSLVQQNPLSALNPQMTIGEQIAE 117

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
               H  A+     +     L  V LS  + + YP ++SGG RQR  +  + +L+P L++
Sbjct: 118 AVWVHRVANAG-ARDRAATMLDRVGLSSAMMNRYPHQMSGGQRQRVVIARALILDPKLVV 176

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            DE  SALDV+ Q  V+ LL    QE +  + +F+THDL ++R + DR++VMY G+VVE 
Sbjct: 177 FDEAVSALDVSVQAQVVALLRQLWQE-LDLAYVFITHDLRIVRHLVDRIVVMYLGRVVET 235

Query: 234 GPMEEVLENPAHPYTQLLLNSLPRMG--VHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291
           G ++ V   P HPYT+ LL S+P M   V      + G     +       GC F +RCP
Sbjct: 236 GDIKSVYAWPRHPYTRALLASVPTMDPTVRNIEPPIKG----ELDAGKVMTGCAFRSRCP 291

Query: 292 FAMEDCRDVEPKLVKVGRDHYAACH 316
           FA+E C    P L   G    AACH
Sbjct: 292 FAIERCAKETPLLRPAG-GQLAACH 315


>emb|CAA68076.1| (X99740) oligopeptide transport ATP-binding protein homolog
           [Mycoplasma hominis]
           Length = 388
           
 Score =  156 bits (390), Expect = 4e-37
 Identities = 108/330 (32%), Positives = 169/330 (50%), Gaps = 18/330 (5%)

Query: 3   LLDVRNLRVYYRTPVGY---VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP 59
           +L VRNL V +  P G+   +  V GV  +V  GE+ G+ GESG GKS    +LI     
Sbjct: 44  ILKVRNLHVSF--PQGHKKSIHIVRGVDLDVHRGEIIGLVGESGSGKSVTSKTLINVNES 101

Query: 60  MEYKGGSAIFKGRDLMSLPRDEL-RKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH 118
                        +L ++ + +  + I+  ++  IPQ  + +LNPT+ +   + D    +
Sbjct: 102 GIISADQIQIGEYELTNIKKQKYWQYIRGQKIGYIPQDPLTSLNPTRTVGKQLLDALNNN 161

Query: 119 GYADRREVEELLRERLSMVKL-----SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
                    E     + ++K      + ++   YP  LSGGM+QR  + +   L P+L+I
Sbjct: 162 EDWKNSTYTEKKNYLIGLLKTFGLRSAEKIFYAYPHTLSGGMKQRIVITMVVALKPELII 221

Query: 174 ADEITSALDVTTQRVVIELLHHFMQE-GIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           ADE T+ALD T Q  V+ L     Q+ GI  SII ++H+++++ +  D + VMYAG++VE
Sbjct: 222 ADEPTTALDPTVQASVLALFEDIRQKMGI--SIILISHNISVIAKFCDYIYVMYAGRIVE 279

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPF 292
            G  +E+  NPAHPYT  L++++P      K E+L  I G P  + N P G  F  R  +
Sbjct: 280 KGTKQEIFTNPAHPYTWALISAIPES----KDEKLYTIQGTPPDMANLPLGDPFVYRNDY 335

Query: 293 AMEDCRDVEPKLVKVGRDHYAACHLLGGES 322
           A+E     EP L+ +   H AA  LL  E+
Sbjct: 336 ALEIDYLKEPPLIPITETHAAATWLLSPEA 365


>pir||D82301 peptide ABC transporter, ATP-binding protein VC0616 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9655049|gb|AAF93782.1| (AE004147) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 331
           
 Score =  155 bits (388), Expect = 6e-37
 Identities = 105/308 (34%), Positives = 169/308 (54%), Gaps = 20/308 (6%)

Query: 20  VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPMEYKGGSAIFKGRDLMSL-P 78
           +RA++ VSF++ +     V GESG GKST    +     P     G   +KGRD+  +  
Sbjct: 31  MRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTS---GVIEYKGRDIQDIVS 87

Query: 79  RDELRKIQYSE-LSIIPQYAMNALNPTKRIKDIVWDLAREHGYA---DRREVEELLRERL 134
           RD+L  + Y E + ++ Q    +LNPT  I   +      H      +++E+EE + E L
Sbjct: 88  RDDL--MHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELL 145

Query: 135 SMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIEL 192
             V L P    A  YP +LSGG RQR  +  +  +  ++++ADE TS LDV+ +  V+ L
Sbjct: 146 EQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNL 205

Query: 193 LHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLL 252
           +     E  + S++++THD+A  R IA+ + VMY G +VE G  +E++ +P HPYT+LL+
Sbjct: 206 MEEMKFERQM-SLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLV 264

Query: 253 NSL--PRMGVHYKRERLSGIPGYPISLLNPPK-GCRFYTRCPFAMEDCRDVEPKLVKVGR 309
           +++  P+  +H   E+L G  G  I L  P   GC F  RC +A   CR+  P++ ++  
Sbjct: 265 SAVPDPKKSIH---EKLEGNKG-EIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSD 320

Query: 310 DHYAACHL 317
           +H+  C+L
Sbjct: 321 NHFVRCYL 328


>dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 308
           
 Score =  154 bits (386), Expect = 1e-36
 Identities = 94/266 (35%), Positives = 150/266 (56%), Gaps = 14/266 (5%)

Query: 1   MALLDVRNLRVYYRTP-------VGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           M  L V +L+V++          VGY +AVDGVS E+ EG+ +G+ GESG GK+T   ++
Sbjct: 1   MGFLKVEDLKVHFPIKGGVIPHTVGYNKAVDGVSLELEEGQTYGLVGESGSGKTTTGRAI 60

Query: 54  I-LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVW 112
           I L K       G  +F G+D+    + +   I+ + + +I Q   ++LNP KR+ DI+ 
Sbjct: 61  IGLNK----LTAGHILFDGQDITKQLKKKKNDIRRN-IQMIFQDPYSSLNPKKRVLDIIA 115

Query: 113 DLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
           +  R      + E  + + E L +V LS      YP E SGG RQR  +  +  L P L+
Sbjct: 116 EPLRNFEKLSKLEERKRVEELLEIVGLSRESIFKYPHEFSGGQRQRIGIARAIALKPKLI 175

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           IADE  SALDV+ Q  V+  +    +E    + +F++HDL ++R + DR+ +MY G++VE
Sbjct: 176 IADEPVSALDVSVQAQVLNFMKDIQKE-FNLTYLFISHDLGIIRHMCDRIGIMYRGRLVE 234

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRM 258
            G  +++ E+P H YT+ L+ ++P M
Sbjct: 235 EGVRDDIYESPQHIYTKRLIAAIPDM 260


>pir||H72366 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981043|gb|AAD35615.1|AE001728_16 (AE001728)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 389
           
 Score =  153 bits (384), Expect = 2e-36
 Identities = 89/241 (36%), Positives = 138/241 (56%), Gaps = 5/241 (2%)

Query: 80  DELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYAD-RREVEELLRERLSMVK 138
           DE R     ++ I+ Q  M++LNP   + DI+ +    HG A  R E  ++ ++ L  V 
Sbjct: 148 DEKRMKFRRKIQIVFQDPMSSLNPRMTVGDILTEPILFHGLAKTREEAVDMAKDLLKSVG 207

Query: 139 LSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQ 198
           L     + YP + SGG RQR  +  +  +NP+++I DE T++LDV+ Q  VI L    +Q
Sbjct: 208 LKEYHLERYPHQFSGGQRQRIAIARAISINPEIVILDEPTASLDVSVQAQVINLFLK-LQ 266

Query: 199 EGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNS--LP 256
           E    + +F++HDL L+R I+  V +MY G++VE+G  +E+ +NP HPYTQ LL++  +P
Sbjct: 267 EEKGFTYLFISHDLGLVRFISHEVGIMYLGRIVEMGNTDEIFDNPLHPYTQALLSAVPVP 326

Query: 257 RMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAACH 316
              V   R+R+    G P S +N P GC F+ RCP+ M  C    P + ++   H+ ACH
Sbjct: 327 DPKVERTRKRIILRGGVP-SPINRPTGCFFHPRCPYKMPVCEKEYPVMKEISPGHWVACH 385

Query: 317 L 317
           L
Sbjct: 386 L 386


>sp|P45288|SAPD_HAEIN PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPD
           >gi|1075118|pir||D64134 peptide transport system
           ATP-binding protein HI1641 - Haemophilus influenzae
           (strain Rd KW20) >gi|1574489|gb|AAC23288.1| (U32837)
           peptide ABC transporter, ATP-binding protein (sapD)
           [Haemophilus influenzae Rd]
           Length = 349
           
 Score =  153 bits (382), Expect = 3e-36
 Identities = 106/329 (32%), Positives = 177/329 (53%), Gaps = 20/329 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MALLD+ NL +  +T  G ++ VDGV+  + EGE+ G+ GESG GKS L+  +I      
Sbjct: 1   MALLDICNLNIEIQTSNGRIKIVDGVNLSLNEGEISGLVGESGSGKS-LIAKVICNAIKE 59

Query: 61  EYKGGSAIFKGRD--LMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLA-- 115
            +   +  F+  D  L+ L  ++ RK+   E+S+I Q  ++ L+P+++I K ++ ++   
Sbjct: 60  NWIITADRFRFHDVELLKLSPNKRRKLVGKEISMIFQNPLSCLDPSRKIGKQLIQNIPNW 119

Query: 116 -------REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLN 168
                  +  G+  RR +E L R     +K    +   YP EL+ G  Q+  + ++    
Sbjct: 120 TFKNKWWKWFGWKKRRAIELLHRVG---IKDHRDIMASYPNELTEGEGQKVMIAMAVANQ 176

Query: 169 PDLLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAG 228
           P LLIADE T+AL+ TT   V  LL   M +    +I+  ++D+  + +  D++ V+Y G
Sbjct: 177 PRLLIADEPTNALESTTALQVFRLLSS-MNQNQGTTILLTSNDIKSISEWCDQISVLYCG 235

Query: 229 KVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYK-RERLSGIPGYPISLLNPPKGCRFY 287
           +  E  P E ++E+P HPYTQ L+N++P        + +L  + G    L   P GCR  
Sbjct: 236 QNTESAPTEILIESPHHPYTQALINAVPDFTQPLGFKTKLGTLEGTAPILEQMPIGCRLG 295

Query: 288 TRCPFAMEDCRDVEPKLVKVGRDHYAACH 316
            RCPFA + C + +P+ +K+ + H  +CH
Sbjct: 296 PRCPFAQKKCME-KPRRLKI-KQHEFSCH 322


>dbj|BAA97046.1| (AB015765) TrkE [Vibrio alginolyticus]
           Length = 331
           
 Score =  152 bits (379), Expect = 7e-36
 Identities = 103/326 (31%), Positives = 169/326 (51%), Gaps = 14/326 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LLD+R+L +   TP G V+AVD +S  + EGE+ G+ GESG GKS +  +++ + K  
Sbjct: 1   MPLLDIRHLTIEIETPQGLVKAVDRMSLTLNEGEIRGLVGESGSGKSLVAKAIVGVSKDN 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPT----KRIKDIVWDLA 115
                        DL+ L   E R++   ++++I Q     L+P+    +++ + +   A
Sbjct: 61  WRITADRMRLGNIDLLQLTPKERRRVIARDIAMIFQEPSTCLDPSEEVGRQLIESIPSRA 120

Query: 116 REHGYADR---REVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
            E  + +R   R+ + +       +K   R+   YP EL+ G  Q+  + ++    P LL
Sbjct: 121 FEGKWWERFKWRKKQAIALLHKVGIKDHKRLMGSYPYELTDGECQKVMIAMAIATKPKLL 180

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           IADE T+ LD  TQ  ++ LL    Q     +I+ + HDLA + Q A R+ VMY G+ VE
Sbjct: 181 IADEPTNDLDPITQSQILRLLSRMNQLNNT-TILLIGHDLATITQWAGRITVMYCGQSVE 239

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRMG--VHYKRERLSGIPGYPISLLNPPKGCRFYTRC 290
                +++  P HPYT  LL ++P     V +K ++L  +PG    L + P GCR   RC
Sbjct: 240 SADTSKIIAAPKHPYTDALLKAMPDFNDWVPHK-QKLQSLPGSIPPLQHLPIGCRLGPRC 298

Query: 291 PFAMEDCRDVEPKLVKVGRDHYAACH 316
           P+A + C ++ P   ++ ++H   CH
Sbjct: 299 PYAQKQCVEI-PHTRRI-KNHKFNCH 322


>dbj|BAB05796.1| (AP001514) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 274
           
 Score =  150 bits (374), Expect = 3e-35
 Identities = 89/266 (33%), Positives = 150/266 (55%), Gaps = 5/266 (1%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M LL+V NL V+ +     +  +   SF++ +     + GESG GKS    S++    P 
Sbjct: 1   MNLLEVENLNVWDQHTNQVI--IHNSSFQLKQQSCLAIVGESGSGKSVTCRSIMRLNKPS 58

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
             + G+ +FKG +L  L   E+R  +   + ++ Q  M A +PT  I   + +   +H  
Sbjct: 59  IRQSGNILFKGENLHHLSEKEMRSKRGKNICMVLQNGMRAFDPTCVIGIHLKETLSQHTV 118

Query: 121 ADRREVEELLRERLSMVKLSPRVADM--YPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            + +E+EE +   +  V L   +  M  YP +LSGGM QR  + ++ +L PD++IADE T
Sbjct: 119 WNNKEIEEKMAFAMESVMLKNPIEIMNKYPHQLSGGMLQRIMIALALVLEPDIIIADEPT 178

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           +ALD  +Q  V+E L   ++E +  SI+FV+HDL ++++IAD V+VM  G++VE G  + 
Sbjct: 179 TALDTISQFEVVEQLIQ-LRERVESSILFVSHDLGVVKRIADDVLVMKDGEIVERGTTQT 237

Query: 239 VLENPAHPYTQLLLNSLPRMGVHYKR 264
           +  +P   YT+ L+++   +G H+KR
Sbjct: 238 IFSDPQKDYTKYLVSTRQALGDHFKR 263


>gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
           Length = 324
           
 Score =  149 bits (372), Expect = 5e-35
 Identities = 101/337 (29%), Positives = 176/337 (51%), Gaps = 29/337 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVR-----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI- 54
           M L++++ + V +   VG  +     A+  VS  + +G++  V GESG GK+TL   ++ 
Sbjct: 1   MGLMELKGVSVIFEDKVGLFKKRKFYALKDVSLSMNQGDLLIVLGESGAGKTTLGRVIVG 60

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
           L+KP      G  ++ G ++    R   +K +  ++ +IPQ   + L   K +++I+   
Sbjct: 61  LQKPT----SGEVVYDGYNIWKNKRKIFKKYR-KDVQLIPQDPYSTLPFNKTVEEILVAP 115

Query: 115 AREHGYADRREVEELLRERLSMVKLSP--RVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
                  ++ E+ + L   L +VKL+P       YP +LSGG +QR ++  S  +NP ++
Sbjct: 116 ILRWEKINKDELRKRLINLLELVKLTPAEEFLGKYPHQLSGGQKQRLSIARSLSVNPRII 175

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQI-----ADRVMVMYA 227
           +ADE  + +D + +  ++  L   ++  +  +++F+THD+ + R           +VM+A
Sbjct: 176 VADEPVTMVDASLRIGILNTLAE-IKNRLNLTMVFITHDIPIARYFYHLFDKGNTIVMFA 234

Query: 228 GKVVEIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFY 287
           G++VE   +EE+L++P HPYT  L+   P +   YK   +       I+     KGC + 
Sbjct: 235 GRIVERADLEEILKDPLHPYTNDLIKLTPSIDNLYKEINVK------INYERVEKGCPYR 288

Query: 288 TRCPFAMEDCRDVEPKLVKVGRDHYAACHLLG--GES 322
            RCPFAM+ C++ EPKL K    H  AC L G  GES
Sbjct: 289 LRCPFAMDICKNEEPKLFKY--SHEVACFLYGKVGES 323


>pir||E82170 peptide ABC transporter, ATP-binding protein VC1683 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9656199|gb|AAF94833.1| (AE004246) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 331
           
 Score =  148 bits (370), Expect = 8e-35
 Identities = 99/325 (30%), Positives = 160/325 (48%), Gaps = 12/325 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M LLD+R+L +   TP G V+AVD +S  + EGE+ G+ GESG GKS +  +++ + K  
Sbjct: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                        DL+ L   E R++   ++++I Q     L+P++ +   + +      
Sbjct: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120

Query: 120 YADR-------REVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
           +  R       R+ + +       +K    +   YP EL+ G  Q+  + ++    P LL
Sbjct: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           IADE T+ +D  TQ  ++ LL    Q     SI+ + HDL  + Q ADR+ VMY G+ VE
Sbjct: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNT-SILLIGHDLTTITQWADRITVMYCGQSVE 239

Query: 233 IGPMEEVLENPAHPYTQLLLNSLPRMGVHY-KRERLSGIPGYPISLLNPPKGCRFYTRCP 291
                +++  P HPYT  LL ++P        +++L  +PG    L + P GCR   RCP
Sbjct: 240 SAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCP 299

Query: 292 FAMEDCRDVEPKLVKVGRDHYAACH 316
           +A   C  VE    +  ++H  +CH
Sbjct: 300 YAQRQC--VEVPHSRWVKNHKFSCH 322


>pir||F64557 dipeptide transport ATP-binding protein dppF - Helicobacter pylori
           (strain 26695) >gi|2313400|gb|AAD07371.1| (AE000548)
           dipeptide ABC transporter, ATP-binding protein (dppF)
           [Helicobacter pylori 26695]
           Length = 268
           
 Score =  145 bits (363), Expect = 5e-34
 Identities = 85/264 (32%), Positives = 148/264 (55%), Gaps = 11/264 (4%)

Query: 1   MALLDVRNLRVYYRT------PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           M LL+++ L+  Y        P   + A++G+SFEV + EV  + GESGCGKST    L 
Sbjct: 1   MKLLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILA 60

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
             +       G+  F G+  +   + +    +  ++ +I Q   ++LNP  ++ +I+ + 
Sbjct: 61  GIE---RQDSGAIYFNGKRHLHFSKQDWFDYR-KKVQMIFQDPYSSLNPRWKVGEIIAEP 116

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
              + +  ++E++  + E +  V L     D YP + SGG RQR  +  + +L+P ++I 
Sbjct: 117 LLLNSHFSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVIC 176

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE  SALDV+ Q  V+ LL    +E +  + IF++HDL ++  I+D+++VM  G++VE G
Sbjct: 177 DEPVSALDVSIQAQVLNLLLDLQKE-MGLTYIFISHDLGVVEHISDKIIVMNQGQIVETG 235

Query: 235 PMEEVLENPAHPYTQLLLNSLPRM 258
            ++ V+  P HPYTQ LLN++P +
Sbjct: 236 DVDSVISAPKHPYTQKLLNAVPHL 259


>pir||A71952 dipeptide transport system ATP-binding protein - Helicobacter
           pylori (strain J99) >gi|4154801|gb|AAD05857.1|
           (AE001465) DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING
           PROTEIN [Helicobacter pylori J99]
           Length = 268
           
 Score =  145 bits (363), Expect = 5e-34
 Identities = 85/264 (32%), Positives = 148/264 (55%), Gaps = 11/264 (4%)

Query: 1   MALLDVRNLRVYYRT------PVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           M LL+++ L+  Y        P   + A++G+SFEV + EV  + GESGCGKST    L 
Sbjct: 1   MKLLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILA 60

Query: 55  LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
             +       G+  F G+  +   + +    +  ++ +I Q   ++LNP  ++ +I+ + 
Sbjct: 61  GIE---RQDSGAIYFNGKRHLHFSKQDWFDYR-KKVQMIFQDPYSSLNPRWKVGEIIAEP 116

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
              + +  ++E++  + E +  V L     D YP + SGG RQR  +  + +L+P ++I 
Sbjct: 117 LLLNSHFSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVIC 176

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE  SALDV+ Q  V+ LL    +E +  + IF++HDL ++  I+D+++VM  G++VE G
Sbjct: 177 DEPVSALDVSIQAQVLNLLLDLQKE-MGLTYIFISHDLGVVEHISDKIIVMNQGQIVETG 235

Query: 235 PMEEVLENPAHPYTQLLLNSLPRM 258
            ++ V+  P HPYTQ LLN++P +
Sbjct: 236 DVDSVISAPKHPYTQKLLNAVPHL 259


>pir||A82876 oligopeptide transport system permease protein UU560 [imported] -
           Ureaplasma urealyticum
           >gi|6899566|gb|AAF30973.1|AE002154_9 (AE002154)
           oligopeptide transport system permease protein
           [Ureaplasma urealyticum]
           Length = 506
           
 Score =  144 bits (359), Expect = 2e-33
 Identities = 102/323 (31%), Positives = 162/323 (49%), Gaps = 13/323 (4%)

Query: 5   DVRNLRVYYRTPV---GYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPM 60
           ++ N+R+ +  P         +   S +  EGEV  + GESG GKS +   L  L     
Sbjct: 161 EIENVRLTFTNPSKPNDRALVLRNTSVQFYEGEVHAIIGESGSGKSVITSLLYGLAGKNA 220

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQY--SELSIIPQYAMNALNPTKRI-KDIVWDLARE 117
             + G  +    ++      +  K +Y    +S + Q  M+ LNPT +I K I+  +   
Sbjct: 221 NVEEGKILLYNNEVQDFSFKDWEKSRYLGKVISAVFQNPMSTLNPTMKIGKQIMEGMLIN 280

Query: 118 HGYADRREVEELLRERLSMVKLS--PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
                R+E      E L + K++    + ++YP ELSGGM QR  +     L+P +L+ D
Sbjct: 281 GIVKTRKEAYNKSIEYLKLTKINNPEEIMELYPHELSGGMIQRVVIASIVSLHPKILVLD 340

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E T+ALD T Q +V++++   +QE     IIF+THDL ++  IA+ + +MYAG+++E G 
Sbjct: 341 EPTTALDPTVQALVLDVIRE-LQEKFKMCIIFITHDLGVVASIANYISIMYAGQIIEEGQ 399

Query: 236 MEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAME 295
            +E+L  P HPYT  L+ S+P +    K +RL+ I G   S LN   G  F  R  +A+ 
Sbjct: 400 RDEILWYPQHPYTWGLIMSMPDVN---KGDRLATIKGSVPSRLNDIVGDAFAIRNDYALT 456

Query: 296 DCRDVEPKLVKVGRDHYAACHLL 318
              + EP++  V   H     LL
Sbjct: 457 RDFEHEPEMYHVSETHRVKSALL 479


>pir||T35941 probable ABC-type transport systsem ATP-binding protein -
           Streptomyces coelicolor >gi|4158200|emb|CAA22763.1|
           (AL035206) putative ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 335
           
 Score =  140 bits (349), Expect = 2e-32
 Identities = 110/331 (33%), Positives = 155/331 (46%), Gaps = 32/331 (9%)

Query: 3   LLDVRNLRVYYRTPVGY-VRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           +L VR L V +  P G  V AV    F+V  GE   + GESGCGKS L  +L+   P   
Sbjct: 7   VLSVRGLSVRFLMPGGRRVAAVTDAHFDVAPGECLALIGESGCGKSVLASALLGLLPGNA 66

Query: 62  YKGGSAIFKGRDLMSLPRDEL-RKIQYSELSIIPQYAMNALNPTKRIK----DIVWDLAR 116
              G A+    DL++     L R ++   + ++PQ     L P + ++    + V +L  
Sbjct: 67  QTAGRALLGDLDLLAADERTLARTVRGRLIGLVPQSPAAHLTPVRTVRSQLAETVAELTG 126

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
             G   R+ + E                D +P ELSGG+ QRA   ++ + +  LL+ADE
Sbjct: 127 VRG--GRKALREAAGAAAERAAFPADHLDHHPHELSGGLAQRAATALALVGDAPLLLADE 184

Query: 177 ITSALDVT-TQRVVIELLHHFMQ-EGIV-------KSIIFVTHDLALLRQIADRVMVMYA 227
            T+ LD     R V EL  H    EG V       ++++ +THDLA   +IADRV VMYA
Sbjct: 185 PTTGLDRDLVDRTVDELRRHVDDAEGKVARGDAGSRALLMITHDLAAAARIADRVAVMYA 244

Query: 228 GKVVEIGPMEEVL--ENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCR 285
           G++VE+           P HPY++ LL++LP  G        + IPG P  L   P GC 
Sbjct: 245 GRIVELADAGAFFGAPGPRHPYSRGLLDALPDRG-------FTPIPGLPPELGALPGGCA 297

Query: 286 FYTRCPFAMEDCRDVEPKLVKVGRDHYAACH 316
           F  RC  A + C  + P        H  ACH
Sbjct: 298 FAARCDRATDACAALPP------LRHAVACH 322


>dbj|BAB05519.1| (AP001513) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 253
           
 Score =  131 bits (326), Expect = 1e-29
 Identities = 90/262 (34%), Positives = 139/262 (52%), Gaps = 20/262 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M LL V +L   Y T  G V A+  VSF+V +GE  G+ GESGCGKSTL   L+  +   
Sbjct: 1   MTLLSVDHLVKSYGT--GKV-AISDVSFDVNKGECLGLVGESGCGKSTLARCLLRIE--- 54

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD------- 113
               GS  FK + +  L    LR  +  +L  + Q    ALNP  ++KD + D       
Sbjct: 55  SIDRGSITFKHQSIERLKERRLRPFR-KDLQAVFQNPTAALNPKLKVKDSLLDPYDQYKQ 113

Query: 114 --LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDL 171
               R   Y  +   +  +R+ L  V+L   +A+ YP ELSGG RQR T+  +  + P L
Sbjct: 114 GLKLRHFSYTSK---DAFVRQLLEAVELPSSLAERYPHELSGGQRQRVTIARAISIEPAL 170

Query: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
           +I DE T++LDV +Q  ++ LL   ++  +  + +F++HDLA + Q++ R++VM  G  V
Sbjct: 171 IILDEPTASLDVISQGAILRLLSD-LRNTLNVAYLFISHDLAAVEQMSQRIIVMKDGTFV 229

Query: 232 EIGPMEEVLENPAHPYTQLLLN 253
           +    + +     HPYT+ L++
Sbjct: 230 DEFQSDHLFSEGRHPYTKELIS 251


>dbj|BAB04290.1| (AP001509) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 271
           
 Score =  116 bits (289), Expect = 3e-25
 Identities = 80/262 (30%), Positives = 134/262 (50%), Gaps = 13/262 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRA------VDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI 54
           M+LL+VR++   YRT + + RA      +  VS  + EG   G+ G SG GKSTL   ++
Sbjct: 1   MSLLEVRDVTHTYRTSLLFWRAKQRAPVLTNVSLSIEEGMCMGLLGTSGAGKSTLGKVIL 60

Query: 55  -LRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWD 113
            L KP    + G+  F+G+DL  +     R+++  +L ++ Q   +++NP    + I+ +
Sbjct: 61  GLAKP----QKGTVFFQGQDLYQMDPKSRRRVR-RDLQVVFQDCYSSVNPRMTAEQIIGE 115

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
               +      E +  +   L MV L       YP E SGG  QR  +  +  L P L++
Sbjct: 116 PLENYERLSASEQKRKIAHLLDMVGLRSDDMRKYPREFSGGQLQRINIARAIALKPKLIV 175

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            DE  S+LD+  Q V++ELL   ++     S +F+THD+     I+D + VM  G+++E 
Sbjct: 176 LDESVSSLDMVNQTVILELLRE-LKAAFGLSYLFITHDIKAAYSISDELAVMEKGQLIEQ 234

Query: 234 GPMEEVLENPAHPYTQLLLNSL 255
              +  L +  HP  + LL+S+
Sbjct: 235 CKDKAQLFSSKHPAVKNLLSSI 256


>emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lactis]
           Length = 368
           
 Score =  115 bits (286), Expect = 6e-25
 Identities = 72/264 (27%), Positives = 142/264 (53%), Gaps = 15/264 (5%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A++++ NL V +      V AV   +  + +G+++GV G SG GKSTLV ++ L + P E
Sbjct: 3   AIIELNNLSVQFHQKGRLVTAVKNATLHIEKGDIYGVIGYSGAGKSTLVRTINLLQKPTE 62

Query: 62  YK---GGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREH 118
            +    G  IF   + +     +LR+ +  ++ +I Q+  N L+      ++ + L    
Sbjct: 63  GQIVINGEKIFDSENPVKFTGAKLREFR-QKIGMIFQH-FNLLSEKTVFNNVAFALQHSQ 120

Query: 119 --------GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPD 170
                    Y  ++E  + + E L +V L+  ++D YP +LSGG +QR  +  +   +P+
Sbjct: 121 IEDKNGKKRYLTKKEKNDKVTELLKLVDLAD-LSDKYPAQLSGGQKQRVAIARALANDPE 179

Query: 171 LLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           +LI+DE TSALD  T   +++LL   + E +  +++ +TH++ ++++IA++V VM  G++
Sbjct: 180 ILISDEGTSALDPKTTNQILDLLKS-LHEKLGITVVLITHEMQVVKEIANKVAVMQNGEI 238

Query: 231 VEIGPMEEVLENPAHPYTQLLLNS 254
           +E   + ++   P    T+  + +
Sbjct: 239 IEQNSLIDIFAQPKEALTKQFIET 262


>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
           [Archaeoglobus fulgidus] >gi|7442524|pir||H69334
           glutamine transport protein glnQ - Archaeoglobus
           fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
           ABC transporter, ATP-binding protein (glnQ)
           [Archaeoglobus fulgidus]
           Length = 242
           
 Score =  112 bits (278), Expect = 5e-24
 Identities = 77/262 (29%), Positives = 136/262 (51%), Gaps = 28/262 (10%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L++ +L   +    G +  + GV+ +V +GEV  + G SG GKSTL+  +   + P 
Sbjct: 1   MAQLEIIDLHKRF----GELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPT 56

Query: 61  EYKGGSAIFKGRDLMSLPRD--ELRK---IQYSELSIIPQYA--MNALNPTKRIKDIVWD 113
               G  +  G D+ +   D  ++R+   I + + ++ P      N      +IK +   
Sbjct: 57  S---GKILLDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKM--- 110

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
                    +RE EEL    L  V L  + AD YP +LSGG +QR  +  +  +NP++++
Sbjct: 111 --------SKREAEELGMRLLEKVGLEDK-ADYYPAQLSGGQQQRVAIARALAMNPEVML 161

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            DE+TSALD    + V++++    ++G+  +++ VTH++   R++ DRV+ M  G +VE 
Sbjct: 162 FDEVTSALDPELVKEVLDVMKQLARDGM--TMVVVTHEMGFAREVGDRVIFMDGGVIVEE 219

Query: 234 GPMEEVLENPAHPYTQLLLNSL 255
           G  E++  NP H  T+  L+ +
Sbjct: 220 GKPEQIFSNPKHERTRKFLSMI 241


>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
           acid ABC transporter, ATP-binding protein [Thermotoga
           maritima]
           Length = 242
           
 Score =  110 bits (273), Expect = 2e-23
 Identities = 73/257 (28%), Positives = 135/257 (52%), Gaps = 26/257 (10%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +L + +L  Y+    G +  + G+  EV +GEV  + G SG GKSTL+  + L +   
Sbjct: 1   MTVLKIEDLHKYF----GKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLE--- 53

Query: 61  EYKGGSAIFKGRDLMSLPRDELRK---IQYSELSIIPQYAM--NALNPTKRIKDIVWDLA 115
           EY+ G   FKG  +     + +R    + + + ++ P  ++  N      ++K++  D  
Sbjct: 54  EYQRGKIYFKGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKD-- 111

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
                    E  E  ++ L  V L  ++ +  P  LSGG +QR  +  + +++P+L++ D
Sbjct: 112 ---------EAVEKAKKLLERVGLIEKINEK-PGNLSGGQQQRVAIARALMMDPELMLFD 161

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E TSALD    + V++++    Q G+  +++ VTH++   R ++DRV+ M  G++VE+GP
Sbjct: 162 EPTSALDPELVKEVLDVIKDLAQSGM--TMLIVTHEMRFARDVSDRVVFMDEGRIVEMGP 219

Query: 236 MEEVLENPAHPYTQLLL 252
            E++  NP +  T+  L
Sbjct: 220 PEKIFSNPENERTREFL 236


>pir||F82170 peptide ABC transporter, ATP-binding protein VC1684 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9656200|gb|AAF94834.1| (AE004246) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 262
           
 Score =  109 bits (271), Expect = 3e-23
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 13/258 (5%)

Query: 2   ALLDVRNLRVYYRTPVGYVR-----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           ALL+V NL   + T  G++R     AV  VSF +  G+  G  G++G GKSTL   L   
Sbjct: 3   ALLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
             P    GG     G  L         K+    + +I Q    +LNP  +I  I+    +
Sbjct: 63  VAPT---GGEIRVNGELLEHKDYSTRCKL----IRMIFQDPNTSLNPRLQIGTILEGPLK 115

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            +           +++ L  V L P  A  YP  L+ G +QR  +  + +L P ++IADE
Sbjct: 116 RNTSMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADE 175

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             + LD+  +  ++ L    +QE +  S ++V+  + +++ I D+++VM+ G VVE G  
Sbjct: 176 ALNGLDMAMRSQILNLFLE-LQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGET 234

Query: 237 EEVLENPAHPYTQLLLNS 254
            EVL +P HP TQ ++ S
Sbjct: 235 HEVLADPQHPITQRMIES 252


>pir||H82377 ABC transporter, ATP-binding protein VCA1101 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9658548|gb|AAF96993.1| (AE004435) ABC transporter,
           ATP-binding protein [Vibrio cholerae]
           Length = 486
           
 Score =  104 bits (258), Expect = 1e-21
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 9/256 (3%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           ALL V+ L +           V+ +SFE+   +   + GE+G GKS L +++I   P   
Sbjct: 29  ALLSVQQLAI----STAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGL 84

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G     G+      + E   +   +L+++PQ   +ALNP  R  + V ++ R     
Sbjct: 85  RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLV-MG 143

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
           +      L       V L   ++  YP +LSGGM QR   + +T     LLIADE T  L
Sbjct: 144 NHAASAALTDSAFQQVALHQDLSK-YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGL 202

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLE 241
           D + +  +I LL   +  G   +++ +THD+ +  ++   ++VM  G + E GP ++VL 
Sbjct: 203 DASRRDQIIALLQAQLTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLS 259

Query: 242 NPAHPYTQLLLNSLPR 257
           +P   YT+ L+N+ PR
Sbjct: 260 HPQSDYTKALINADPR 275


 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 27/203 (13%)

Query: 24  DGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPPMEYKGGSAIFKGR--DLMSLPRD 80
           D +SF +  GE+ G++G+SGCGKSTL   L+ L KP           +GR   L ++P  
Sbjct: 306 DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS----------QGRIHRLQAIPLG 355

Query: 81  ELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYADRREVEELLRERLSMVKLS 140
           +  K+         Q   +AL  +  ++ ++ D+ R+H   +R ++  LL ERL+   LS
Sbjct: 356 KALKLY--------QDPPSALAKSVTLQTLLEDVCRQHS-VERSQIPRLL-ERLA---LS 402

Query: 141 PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSALDVTTQRVVIELLHHFMQEG 200
           P +      ++SGG  QR  ++ + L  P LL+ADE TS LD  T    ++L+    QE 
Sbjct: 403 PNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQE- 461

Query: 201 IVKSIIFVTHDLALLRQIADRVM 223
           I  +++ ++HD   L +   RV+
Sbjct: 462 IGCALVLISHDKLALEKTCHRVL 484


>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
           (strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
           (AE001779) sugar ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 355
           
 Score =  102 bits (253), Expect = 4e-21
 Identities = 76/261 (29%), Positives = 128/261 (48%), Gaps = 25/261 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA + +  ++ Y+    G VRA+DG+   V EGE   + G SGCGK+TL+  +   +   
Sbjct: 1   MAQVKIDGVKKYF----GNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLE--- 53

Query: 61  EYKGGSAIFKGRDLMSL-PRDELRKIQYSELSIIPQYAM--NALNPTKRIKDIVWDLARE 117
           +  GG   F  RD+ +L P+D    + +   ++ P   +  N   P K  K         
Sbjct: 54  QVTGGKIFFNDRDVTNLPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKK--------- 104

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
                + E+E+ ++    ++ +S  + D YP +LSGG RQR  +  + +  P++L+ DE 
Sbjct: 105 ---VPKEEIEKRVKWAADLLHIS-ELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEP 160

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
            S LD    RV +      +QE I  + I+VTHD      + DR+ VM  GK+ ++G   
Sbjct: 161 LSNLDALL-RVKMRSELKKLQERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPS 219

Query: 238 EVLENPAHPYTQLLLNSLPRM 258
           E+  +P + +    + S P+M
Sbjct: 220 EIYHHPVNIFVAGFVGS-PQM 239


>dbj|BAA97047.1| (AB015765) compensate SapD [Vibrio alginolyticus]
           Length = 263
           
 Score =  102 bits (253), Expect = 4e-21
 Identities = 78/258 (30%), Positives = 124/258 (47%), Gaps = 13/258 (5%)

Query: 2   ALLDVRNLRVYYRTPVGYVR-----AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
           ALL+V NL   + T     +     AV  VSF +  G+  G  G++G GKSTL   L   
Sbjct: 3   ALLEVDNLSKQFVTRSRLFKRQVNEAVKPVSFTLEPGQTIGFIGQNGSGKSTLARMLA-- 60

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
              +E   G     G  L         K+    + +I Q    +LNP  +I  I+    +
Sbjct: 61  -GVVEPSSGEIRVNGERLEHKDYATRCKL----IRMIFQDPNTSLNPRIQIGRILEGPLK 115

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
            +         + ++  L  V L P  A  YP  L+ G +QR  +  + +L P +++ADE
Sbjct: 116 RNTNMPPDARMQRVKNTLLRVGLLPEHAYFYPQMLAAGQKQRVCLARALILQPSIIVADE 175

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             + LD+  +  +I L    +QE +  S ++V+  + +++ I D+VMVM+ G+VVE G  
Sbjct: 176 ALNGLDMAMRSQIINLFLE-LQEEMGLSFVYVSQHIGIVKHITDKVMVMHEGEVVEFGET 234

Query: 237 EEVLENPAHPYTQLLLNS 254
            +VL +P HP TQ L+ S
Sbjct: 235 NQVLTSPEHPITQRLVES 252


>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
           >gi|7445942|pir||B69377 ABC transporter, ATP-binding
           protein homolog - Archaeoglobus fulgidus
           >gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
           ATP-binding protein [Archaeoglobus fulgidus]
           Length = 228
           
 Score =  102 bits (251), Expect = 7e-21
 Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 9/233 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M ++++RN+   YRT    VRA+DGVS +V EGE   + G SG GKSTL++ +     P 
Sbjct: 1   MKVVELRNVYKIYRTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKSTLLNLIGCLDKPT 60

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E   G  +  G +  SL  + L +++   +  I Q   N +     ++++  +L      
Sbjct: 61  E---GEVLINGVETSSLNDNRLTELRRDTIGFIFQ-TYNLIPTLTALENV--ELPMIFKG 114

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             RRE EE  +E L  V L   + +  P E+SGG +QR  +  +   NP +L+ DE T  
Sbjct: 115 VGRREREERAKELLKNVGLEKEM-NRKPNEMSGGQQQRVAIARALANNPKILLCDEPTGN 173

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           LD  +   V+E++ H   E +  ++I VTHD +L +   DRV+ +  GK+  +
Sbjct: 174 LDTKSGEQVMEIIRH-QNEVLGVTVILVTHDPSLAK-YGDRVIRLRDGKIESV 224


>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
           >gi|7445944|pir||D69433 ABC transporter, ATP-binding
           protein homolog - Archaeoglobus fulgidus
           >gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
           ATP-binding protein [Archaeoglobus fulgidus]
           Length = 226
           
 Score = 98.7 bits (242), Expect = 8e-20
 Identities = 80/233 (34%), Positives = 119/233 (50%), Gaps = 11/233 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL-ILRKPP 59
           M ++++ ++   YRT    V A+DGVS EV  GE   + G SG GKSTL++ +  L KP 
Sbjct: 1   MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLNMIGCLDKPT 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G  I  G     L   EL K++   +  I  +    L PT    + V +L     
Sbjct: 61  K----GEVIINGVKTSGLSDRELTKLRRDSIGFI--FQQYNLIPTLTALENV-ELPMIFR 113

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              R E E   +E L +V +   +AD  P E+SGG +QR  +  +   NP +L+ DE T 
Sbjct: 114 GVARAERERRAKELLKVVGIE-ELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTG 172

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
            LD  + R V+ +L +  +E  V +++ VTHD + L + ADRV+ +  GKVVE
Sbjct: 173 NLDTKSGRQVMGILKNLNEENGV-TVVLVTHDPS-LSEYADRVIRIRDGKVVE 223


>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
           >gi|1075335|pir||G64181 ABC-type transport protein
           HI1078 - Haemophilus influenzae
           >gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
           transporter, ATP-binding protein [Haemophilus influenzae
           Rd]
           Length = 257
           
 Score = 97.5 bits (239), Expect = 2e-19
 Identities = 76/256 (29%), Positives = 126/256 (48%), Gaps = 16/256 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP- 59
           M++L V N++  +         + G+ FE+ +GEV  + G SG GK+T +  L L + P 
Sbjct: 1   MSMLKVSNIQKNFNGN----HVLKGIDFEINKGEVVAILGPSGSGKTTFLRCLNLLERPE 56

Query: 60  ---MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
              +E+  GS        +S   DEL+  + S + +  QY    L P +   + V +   
Sbjct: 57  QGILEFTDGSLKIDFSQKIS-KADELKLRRRSSM-VFQQYN---LFPHRSALENVMEGMV 111

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
                D+ +  E     L  V L  + AD++P +LSGG +QR  +  +  + PD+++ DE
Sbjct: 112 VVQKQDKAQAREKALSLLEKVGLKNK-ADLFPSQLSGGQQQRVGIARALAVKPDIILLDE 170

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            TSALD      V++ L    QEG   ++I VTH++   + +ADRV++M  G +VE    
Sbjct: 171 PTSALDPELVGEVLQTLKMLAQEG--WTMIIVTHEMQFAKDVADRVILMADGHIVEQNTA 228

Query: 237 EEVLENPAHPYTQLLL 252
           ++    P H  T+  L
Sbjct: 229 DKFFTCPQHERTKQFL 244


>pir||S77386 nitrate transport protein D-3 - Synechocystis sp. (strain PCC 6803)
           >gi|1652568|dbj|BAA17489.1| (D90906) nitrate transport
           protein NrtD [Synechocystis sp.]
           Length = 332
           
 Score = 97.5 bits (239), Expect = 2e-19
 Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 22/244 (9%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A L + N+   Y T  G    +DGV+ EV EGE   + G SGCGKSTL++ +     P +
Sbjct: 17  AFLAIENVSKVYPTAQGPYTVLDGVNLEVKEGEFICIIGHSGCGKSTLLNMVSGFNQPTQ 76

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G+   K + L++ P  +        + +   Y    L P K   D V  LA E  Y 
Sbjct: 77  ---GTVKLKNQ-LITAPGPD-------RMMVFQNY---CLLPWKSAYDNV-SLAVESVYP 121

Query: 122 D--RREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
           D  + E EEL+   L MV L+   A   P ++SGGM+QR  +  +  ++P++LI DE   
Sbjct: 122 DKSKTEKEELVAHYLEMVGLT-EAAQKKPGQISGGMKQRVAIARALAISPEVLILDEPFG 180

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           ALD  T+  + E L    +E  + +++ +THD+     +ADR+++M  G   +IG   E+
Sbjct: 181 ALDAITKEELQEELLKIWRENNL-TVLMITHDIDEALFLADRLVMMTNGPSAKIG---EI 236

Query: 240 LENP 243
           L+ P
Sbjct: 237 LDIP 240


>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
           (strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
           (AE001721) sugar ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 359
           
 Score = 97.1 bits (238), Expect = 2e-19
 Identities = 76/257 (29%), Positives = 129/257 (49%), Gaps = 20/257 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  + V NL+ Y+    G V+AVDGVSFEV +GE   + G SGCGK+T   +L++     
Sbjct: 1   MPSIRVVNLKKYF----GKVKAVDGVSFEVKDGEFVALLGPSGCGKTT---TLLMLAGIY 53

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLAREHG 119
           +   G   F    +  +P       +Y E+ ++  +   AL P   + ++I + L     
Sbjct: 54  KPTSGEIYFDDVLVNDIPP------KYREVGMV--FQNYALYPHMTVFENIAFPLRARR- 104

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              + EVE+ + E ++   L   + D  P +LSGG +QR  +  + +  P +L+ DE  S
Sbjct: 105 -ISKDEVEKRVVE-IARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLS 162

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD   + ++   + H  QE  + S ++VTHD A    +A R+ V   GK+V+ G  +EV
Sbjct: 163 NLDANLRMIMRAEIKHLQQELGITS-VYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEV 221

Query: 240 LENPAHPYTQLLLNSLP 256
            ++P + +    + + P
Sbjct: 222 YDSPKNMFVASFIGNPP 238


>gb|AAK41516.1| Oligo/dipeptide transport, ATP binding protein . carboxy-end
           fragment. (dppF-2) [Sulfolobus solfataricus]
           Length = 103
           
 Score = 96.3 bits (236), Expect = 4e-19
 Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 221 RVMVMYAGKVVEIGPMEEVLENPAHPYTQLLLNSLP--RMGVHYKRERLSGIPGYPISLL 278
           R+ VMY GKVVEIG  EEV+  P HPYTQ LL ++P     +  K   + G    P+ L 
Sbjct: 7   RIGVMYLGKVVEIGTPEEVISEPLHPYTQALLQAVPVPDPDIGIKEPNIKGEIQSPLEL- 65

Query: 279 NPPKGCRFYTRCPFAMEDCRDVEPKLVKVGRDHYAACHL 317
             PKGC FY+RCPFA + C++  P++ ++  DHY ACHL
Sbjct: 66  --PKGCVFYSRCPFAKDICKEKPPEIKRIKGDHYVACHL 102


>sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PROTEIN AOTP
           >gi|11277315|pir||T44458 histidine/ornithine transport
           protein aotP [imported] - Pseudomonas aeruginosa
           >gi|11347446|pir||A83535 arginine/ornithine transport
           protein AotP PA0892 [imported] - Pseudomonas aeruginosa
           (strain PAO1) >gi|2668599|gb|AAC71074.1| (AF012537)
           ATPase [Pseudomonas aeruginosa]
           >gi|9946792|gb|AAG04281.1|AE004523_9 (AE004523)
           arginine/ornithine transport protein AotP [Pseudomonas
           aeruginosa]
           Length = 254
           
 Score = 94.0 bits (230), Expect = 2e-18
 Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 21/252 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  L+V++L   Y    G    + GVS     G+V  + G SG GKST +  + L + P 
Sbjct: 1   MYKLEVQDLHKRY----GSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQP- 55

Query: 61  EYKGGSAIFKGRDLMSLP-RD------ELRKIQY--SELSIIPQYAMNALNPTKRIKDIV 111
               G  +  G +L  +P RD      + R++Q   S LS++ Q+  N  +    +++++
Sbjct: 56  --HAGKILLNGEELKLVPGRDGALKAADSRQLQRMRSRLSMVFQH-FNLWSHMSALENVI 112

Query: 112 WDLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDL 171
                  G + +  +E+     L+ V ++ R  D YP  +SGG +QR  +  +  + P++
Sbjct: 113 EAPVHVLGVSKKEAIEKA-EHYLAKVGVAHR-KDAYPAHMSGGEQQRVAIARALAVEPEV 170

Query: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
           ++ DE TSALD      V++++    QEG  ++++ VTH++   R+++++++ ++ G V 
Sbjct: 171 MLFDEPTSALDPELVGEVLKVMQDLAQEG--RTMVVVTHEMGFAREVSNQLVFLHKGLVE 228

Query: 232 EIGPMEEVLENP 243
           E G  +EVL NP
Sbjct: 229 EHGCPKEVLANP 240


>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp.  (strain PCC
           6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
           transporter [Synechocystis sp.]
           Length = 368
           
 Score = 93.6 bits (229), Expect = 3e-18
 Identities = 72/250 (28%), Positives = 125/250 (49%), Gaps = 24/250 (9%)

Query: 2   ALLDVRNLRVYYR---TPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKP 58
           ++L V++L   +R   TPV     +  ++F +  GE+ G+ G SGCGK+TL+  +   + 
Sbjct: 17  SVLTVQDLGKSFRGQSTPV-----LQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGFET 71

Query: 59  PME---YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
           P     +  G  +  G + ++ P      + + + ++ P   +          +I + L 
Sbjct: 72  PTSGTVHLEGDCV-SGENGLTPPEQRQTGMVFQDYALFPHLTIT--------DNIAFGLR 122

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
            +    +R++++  + E L +V L+  +   YP ELSGG +QR  +  +    P+L++ D
Sbjct: 123 HKSQKLNRQQIQGRVAEVLHLVGLTG-LEKRYPHELSGGQQQRIALARALAPKPNLILLD 181

Query: 176 EITSALDVTT-QRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           E  S LDV   QR+  E+ H     G   + IFVTHD      I+DR+ VMY G + +IG
Sbjct: 182 EPLSNLDVQVRQRLRHEIRHILKATGT--AAIFVTHDQEEAMAISDRIGVMYRGNLEQIG 239

Query: 235 PMEEVLENPA 244
             EE+  +PA
Sbjct: 240 TPEEIYRSPA 249


>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
           RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
           Length = 314
           
 Score = 92.1 bits (225), Expect = 8e-18
 Identities = 66/239 (27%), Positives = 122/239 (50%), Gaps = 13/239 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +L+V+++   + TP G V AV+ VSF    GEV G+ G +G GK+T +  +     P 
Sbjct: 1   MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRP- 59

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G  +  G D +  P +  ++I Y  ++  P      L P   ++D +    R  G+
Sbjct: 60  --DSGEVLVDGIDAVKNPLEVRKRIAY--MTQEPD-----LTPPLSVRDYIIYYFRFRGF 110

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
           + +R+ ++   + L +  L    A   P +LS G+++R  +  +   +  L+  DE T+ 
Sbjct: 111 S-KRDAKKHCEDILELFGLKTH-AHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAG 168

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           +D  ++R   EL+   +++  V ++I  +HDL  +  +ADRV++M  GK+V  G  +E+
Sbjct: 169 VDPRSKRKTWELIKEKLEDKGV-TVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226


>pir||E72757 probable phosphate transport ATP-binding protein pstB APE0050 -
           Aeropyrum pernix (strain K1) >gi|5103438|dbj|BAA78959.1|
           (AP000058) 253aa long hypothetical phosphate transport
           ATP-binding protein pstB [Aeropyrum pernix]
           Length = 253
           
 Score = 91.7 bits (224), Expect = 1e-17
 Identities = 75/267 (28%), Positives = 131/267 (48%), Gaps = 33/267 (12%)

Query: 1   MALLDVR--NLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILR 56
           M L+DVR   L V+          + G+SF+   G V  + G SG GKSTL+  +  ++ 
Sbjct: 1   MKLMDVRVSGLNVWITDK----HILKGISFKAQPGTVTAIMGPSGSGKSTLIRVINRLID 56

Query: 57  KPPMEYKGGSAIFKGRDLMSLPRDELRK---IQYSELSIIPQ---YAMNALNPTKRIKDI 110
             P     G       ++M      +R+   + + E +  P    Y   A+ P       
Sbjct: 57  LIPGARVEGEVWINNMNVMKEDPYNIRRYTGMVFQEPNPFPHMTIYENVAIGP------- 109

Query: 111 VWDLAREHGYA-DRREVEELLRERLSMVKLSPRVADM---YPVELSGGMRQRATMVVSTL 166
                + HG A +++E++E++   L M  L   V D    YP +LSGG RQR ++  +  
Sbjct: 110 -----KLHGLAKNKKELDEIVEWALKMAHLWDEVKDRLSDYPHQLSGGQRQRLSLARALA 164

Query: 167 LNPDLLIADEITSALD-VTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVM 225
           L P +L+ DE T+ +D V+T ++   ++ +  +E  + ++I VTH      +I+D+++ +
Sbjct: 165 LKPRVLLLDEPTANIDPVSTVKIEQSIVEYAKEE--MATVIIVTHTPQQAARISDQILFL 222

Query: 226 YAGKVVEIGPMEEVLENPAHPYTQLLL 252
           Y G+V+E GP +E++  P H  T+  L
Sbjct: 223 YEGRVIEYGPTKELVLRPRHELTKKFL 249


>pir||F71849 amino acid ABC transporter, ATP-binding protein - Helicobacter
           pylori (strain J99) >gi|4155696|gb|AAD06680.1|
           (AE001537) AMINO ACID ABC TRANSPORTER, ATP-BINDING
           PROTEIN [Helicobacter pylori J99]
           Length = 248
           
 Score = 91.3 bits (223), Expect = 1e-17
 Identities = 65/260 (25%), Positives = 127/260 (48%), Gaps = 18/260 (6%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A+L+ + L+  Y+  +     +DG++F + +GEV  + G SGCGKST +  L       +
Sbjct: 3   AILETKGLKKTYQNHL----VLDGINFTLNKGEVAVILGPSGCGKSTFLKCL---NGLEK 55

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G  +F+  +L + P     +++     +   Y    L P   + D   ++       
Sbjct: 56  IDEGEILFENTNL-NTPSTNWNQMRQKIGMVFQNY---ELFPHLNVLD---NILLAPLKV 108

Query: 122 DRREVEELLRERLSMVKL--SPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
            +R  +E+L + + ++K          YP ELSGG +QR  +V S  + P +++ DE+T+
Sbjct: 109 QKRSKDEVLSQAVELLKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTA 168

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
           +LD    + V+E++    + G+  S++ VTH++   ++IA +++   +GK+ E    +E 
Sbjct: 169 SLDPEMVKEVLEVILELAKTGM--SMVIVTHEMKFAQKIASKIVFFDSGKIAEENSAKEF 226

Query: 240 LENPAHPYTQLLLNSLPRMG 259
             +P     Q  L +   +G
Sbjct: 227 FNHPKSQRAQKFLETFHFLG 246


>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
           Campylobacter jejuni (strain NCTC 11168)
           >gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
           system ATP-binding protein [Campylobacter jejuni]
           Length = 329
           
 Score = 90.5 bits (221), Expect = 2e-17
 Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 20/233 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L ++N +  Y   + +    + ++F   +GE   + G SGCGKSTL+  +       
Sbjct: 1   MAYLKIKNFKKAYGDKIIF----EDINFSAKKGEFITLLGPSGCGKSTLLRCIA------ 50

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRI-KDIVWDLAREHG 119
              G S I  G+  +SL   +L K+   + +I   +   AL P   + +++ + L  +  
Sbjct: 51  ---GLSQINGGK--ISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKIKK- 104

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
             D++++E+ +++ L +V+L    A  YP +LSGG  QR  +  S ++ PDLL+ DE  S
Sbjct: 105 -MDKKDIEKRVKKMLKLVELE-EYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLS 162

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           ALD   ++ +   +    +E +  + IFVTHD     +++D +++M  GK+++
Sbjct: 163 ALDAKIRKYLRVQIKEIQKE-LELTTIFVTHDQEEALELSDTIILMNEGKIIQ 214


>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
           acidophilum]
           Length = 334
           
 Score = 89.3 bits (218), Expect = 5e-17
 Identities = 64/234 (27%), Positives = 124/234 (52%), Gaps = 16/234 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           + ++   NL   Y    G ++AVDG++ E+ E E++G+ G++G GK+T +  L     P 
Sbjct: 6   LPIIKTENLTKIYP---GGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDP- 61

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G+AI  G DL    ++++R+I    + ++PQ  +      K ++++   +      
Sbjct: 62  --TSGNAIIGGYDLRK-DKEKIRRI----IGVVPQ-DLTTDADLKGVENL--RMIASFYN 111

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             ++E E+ +++ L +V LS    + Y  + SGGMR+R  ++   + +P +L  DE T  
Sbjct: 112 IPKQEAEQRIKDLLEIVDLSD-WGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLG 170

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           LDV T+  + + +    +E +  +II  +H L  + Q+ADR+ ++  GK++  G
Sbjct: 171 LDVNTRSKMWKYIRDIQKE-LGVTIILTSHYLEEVDQLADRISIIDHGKILITG 223


>pir||D83356 probable ATP-binding component of ABC transporter PA2308 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9948341|gb|AAG05696.1|AE004657_3 (AE004657) probable
           ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa]
           Length = 282
           
 Score = 88.9 bits (217), Expect = 7e-17
 Identities = 71/224 (31%), Positives = 110/224 (48%), Gaps = 15/224 (6%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           ALL V  + + YRT    VRA   VSFEV   + F + G SGCGKSTL+ ++     P E
Sbjct: 15  ALLAVDGVSLEYRTRSRVVRATQRVSFEVDPADRFVLLGPSGCGKSTLLKAVAGFITPSE 74

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G    +G+ + +   D  R + + E   +P        P K ++  V    R  G  
Sbjct: 75  ---GEIRLQGQAVRAPGPD--RIVVFQEFDQLP--------PWKTVRQNVLFPLRVSGQV 121

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
            R E E    E L  V L+   A+ YP  LSGGM+ R  +  +  + P +L+ DE  +AL
Sbjct: 122 TRDEAERRADECLEKVGLA-GFAEAYPHTLSGGMKARVAIARALAMQPKILLMDEPFAAL 180

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVM 225
           D  T+R + E L    +E +  +++FVTH +     + +R++++
Sbjct: 181 DALTRRKMQEELLRLWEE-VRFTLLFVTHSIEEALVVGNRILLL 223


>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
           Length = 317
           
 Score = 88.9 bits (217), Expect = 7e-17
 Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 22/243 (9%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A L++RN+   Y    G  + +  +S  + +GE F + G SG GKSTL+  ++  + P  
Sbjct: 3   AKLELRNINKSY----GKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQP-- 56

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD-IVWDLAREHGY 120
              G  I  G+D+  LP ++         +I   +   AL P   + D I + L   H  
Sbjct: 57  -DSGKIIIDGKDVTKLPPNKR--------NIAMVFQNYALYPNMNVFDNIAFPLRMNHFR 107

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
              R V E   ++L +  L     D    ++SGG +QR  +  + + NP L + DE  S 
Sbjct: 108 NISRRVHETA-QKLGIENL----LDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSN 162

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           LD   +      L    QE + ++ +FVTHD      + DR+ V+++GK  +IG  EE+ 
Sbjct: 163 LDARVRYAARNELKKIQQE-LDQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEELY 221

Query: 241 ENP 243
            +P
Sbjct: 222 NDP 224


>gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens]
           Length = 367
           
 Score = 88.5 bits (216), Expect = 9e-17
 Identities = 73/262 (27%), Positives = 127/262 (47%), Gaps = 25/262 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L ++NL+  +    G+   + G+  EV + E     G SGCGKSTL+  +   +   
Sbjct: 1   MANLKIKNLQKGFE---GF-SIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLE--- 53

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E   G+    GRD+      E+   +     +   YA+      ++      DLA     
Sbjct: 54  EVSEGTIELDGRDIT-----EVTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAG---- 104

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
            D++ VE  + E   +++L P + +  P +LSGG RQR  +  + + NP + + DE  S 
Sbjct: 105 VDKQLVESKVNEAARILELGP-LLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSN 163

Query: 181 LDVTTQ---RVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           LD   +   R+ +  LH  +Q     ++I+VTHD      +AD+V+V+ +G++ ++G   
Sbjct: 164 LDAALRVQMRLELARLHKELQA----TMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPL 219

Query: 238 EVLENPAHPYTQLLLNSLPRMG 259
           E+   PA+ +    L + P+MG
Sbjct: 220 ELYHQPANLFVAGFLGT-PKMG 240


>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
           resistance ATP-binding protein (drrA-1) [Pyrococcus
           abyssi]
           Length = 328
           
 Score = 88.5 bits (216), Expect = 9e-17
 Identities = 79/258 (30%), Positives = 124/258 (47%), Gaps = 25/258 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL-ILRKPP 59
           M  ++V NL   Y    G   AV G+SF+V +GE+F   G +G GK+T VH L  L KP 
Sbjct: 1   MYAIEVENLVKKY----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKP- 55

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G AI  G D++  P++  +KI      I+ Q      +P+   +   ++    HG
Sbjct: 56  ---TSGKAIVAGHDVVKEPQEVRKKI-----GIVFQ------DPSLDRELTAYENMYIHG 101

Query: 120 Y---ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
                  RE++E + E L  V+L  R  D      SGGM++R  +  + +  P++L  DE
Sbjct: 102 MIYGLKGRELKEKIEELLKFVELW-RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDE 160

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T  LD  T+  + E +   M+E    +I   TH +    Q+ADR+ ++  GK++  G  
Sbjct: 161 PTIGLDPQTRAHIWEYI-RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTS 219

Query: 237 EEVLENPAHPYTQLLLNS 254
           EE+ +   +    L L S
Sbjct: 220 EELKKLVGNDIIYLKLES 237


>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
           >gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
           hypothetical ATP-binding transport protein [Pyrococcus
           horikoshii]
           Length = 318
           
 Score = 88.2 bits (215), Expect = 1e-16
 Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 21/245 (8%)

Query: 1   MALLDVRNLRVYY--RTP-----VGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           M +++VRNLR  Y  + P     V +  A+ G++F V +GE+FG+ G +G GK+T +  L
Sbjct: 1   MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60

Query: 54  ILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQ-YSELSIIPQYAMNALNPTKRIKDIVW 112
                 +E   G A   G D++   R+  ++I   +E      + + A    +    I  
Sbjct: 61  TTL---LEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY- 116

Query: 113 DLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
                  Y  RRE E+ + E L MV L  R  D+  +  S GM+QR  +  + + +P++L
Sbjct: 117 -------YIPRREAEKRIEELLKMVGLWDRRNDLV-MNYSRGMKQRLAIAKALINDPEVL 168

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
             DE T  LDV +   V EL+   + E   K+++  TH +    ++ DR+ ++  GK++ 
Sbjct: 169 FLDEPTLGLDVQSAVFVRELVRRLVDEE-GKTVLLTTHYMNEAEELCDRIAIIDHGKIIA 227

Query: 233 IGPME 237
           +   E
Sbjct: 228 LNTPE 232


>gb|AAC69845.1| (AF076684) oligopeptide transporter putative ATPase domain
           [Staphylococcus aureus]
           Length = 258
           
 Score = 88.2 bits (215), Expect = 1e-16
 Identities = 66/254 (25%), Positives = 124/254 (47%), Gaps = 11/254 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKP-P 59
           M+L+D++NL +   +    ++ +D    ++   ++  + GESG GKS +  +L+   P  
Sbjct: 2   MSLIDIQNLTIKNTSEKSLIKGID---LKIFSQQINALIGESGAGKSLIAKALLEYLPFD 58

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
           +     S  F G ++  L +     I Y    I   YA +  + TK  K +   + R+H 
Sbjct: 59  LSCTYDSYQFDGENVSRLSQYYGHTIGY----ISQNYAESFNDHTKLGKQLT-AIYRKHY 113

Query: 120 YADRREVEELLRERLSMVKLSPR-VADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
              + E    + + LS V L  + + + Y  +LSGG  +R  +    +L P L+IADE  
Sbjct: 114 KGSKEEALSKVDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLMLEPKLIIADEPV 173

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           ++LD      V++LL H + E   +++  +TH+L+ + +    + V+  G+++E G +  
Sbjct: 174 ASLDALNGNQVMDLLQHIVLEH-GQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNINH 232

Query: 239 VLENPAHPYTQLLL 252
                 HPYT+ L+
Sbjct: 233 FKYEHLHPYTERLI 246


>gb|AAC24216.1| (AF055482) ABC transporter [Thermotoga neapolitana]
           Length = 138
           
 Score = 87.8 bits (214), Expect = 2e-16
 Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 6/133 (4%)

Query: 187 RVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHP 246
           R+ I  L   +++ +  S+I++THDLA    ++DR+ +M+ G +VE+G +E VL +P HP
Sbjct: 7   RMSIVNLFAQLRDQLGVSVIYITHDLATAYYVSDRIAIMFRGDIVEMGSVERVLTDPKHP 66

Query: 247 YTQLLLNSLPRMGVH--YKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKL 304
           YT+LL  S+P       +K E       Y   L    KGC+F  RCP  M  CR+ +P  
Sbjct: 67  YTRLLRESIPEPDPEKKWKEEITIADTEYEEYL---RKGCKFAGRCPEVMSICREEKPPE 123

Query: 305 VKVGRDHYAACHL 317
           + VG D    CHL
Sbjct: 124 IMVG-DSMVRCHL 135


>pir||C83353 probable ATP-binding component of ABC maltose/mannitol transporter
           PA2341 [imported] - Pseudomonas aeruginosa  (strain
           PAO1) >gi|9948377|gb|AAG05729.1|AE004660_5 (AE004660)
           probable ATP-binding component of ABC maltose/mannitol
           transporter [Pseudomonas aeruginosa]
           Length = 370
           
 Score = 87.8 bits (214), Expect = 2e-16
 Identities = 75/260 (28%), Positives = 126/260 (47%), Gaps = 21/260 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L +RNL+  +         + G+  +V + E     G SGCGKSTL+  +   +   
Sbjct: 1   MADLKIRNLQKGFDGQA----IIKGIDLDVRDREFVVFVGPSGCGKSTLLRLIAGLE--- 53

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQ-YAMNALNPTKRIKDIVWDLAREHG 119
           E  GGS    G D+   P  +       +L+++ Q YA+      +R      DLA    
Sbjct: 54  EASGGSIALDGTDITDTPPAK------RDLAMVFQTYALYPHMTVRRNLSFALDLAG--- 104

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
             D+REV   +     +++L   + +  P +LSGG RQR  +  + + NP + + DE  S
Sbjct: 105 -VDKREVAAKVDAAARILELQA-LLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEPLS 162

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD    RV + L    + + +  ++I+VTHD      +AD+V+V+  G+V ++G   E+
Sbjct: 163 NLDAAL-RVQMRLELARLHQELAATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSPLEL 221

Query: 240 LENPAHPYTQLLLNSLPRMG 259
             +PA+ +    L + P+MG
Sbjct: 222 YHHPANLFVAGFLGT-PKMG 240


>gb|AAD22041.1| (AF118229) ATP-binding cassette protein PstB [Streptococcus
           pneumoniae]
           Length = 250
           
 Score = 87.4 bits (213), Expect = 2e-16
 Identities = 68/255 (26%), Positives = 118/255 (45%), Gaps = 19/255 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKP-- 58
           M    VR+L ++Y    G  +A+  +S ++ E ++  + G SGCGKST + +L       
Sbjct: 1   MGTFSVRHLDLFY----GDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLV 56

Query: 59  PMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNP-TKRIKDIVWDLARE 117
           P  +  G  +   +D+ S       K   ++L           NP    I D V    R 
Sbjct: 57  PSCHIEGQVLLDEQDIYS------SKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRT 110

Query: 118 HGYADRREVEELLRERLSMVKLSPRVAD---MYPVELSGGMRQRATMVVSTLLNPDLLIA 174
           HG  D+++++ L+ + L    +   V D      + LSGG +QR  +  +  + PD+L+ 
Sbjct: 111 HGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLM 170

Query: 175 DEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           DE TSALD  +   + +L+    ++    +II VTH++    +I+D+      G++ E G
Sbjct: 171 DEPTSALDPISTLKIEDLIQQLKKD---YTIIIVTHNMQQASRISDKTAFFLTGEICEFG 227

Query: 235 PMEEVLENPAHPYTQ 249
              +V  NP    T+
Sbjct: 228 DTVDVFTNPKDQRTE 242


>sp|Q50734|YP64_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN RV2564
           >gi|7445795|pir||H70728 probable atp-binding transport
           protein - Mycobacterium tuberculosis (strain H37RV)
           >gi|1460076|emb|CAB01051.1| (Z77250) glnQ [Mycobacterium
           tuberculosis]
           Length = 330
           
 Score = 87.0 bits (212), Expect = 3e-16
 Identities = 77/243 (31%), Positives = 121/243 (49%), Gaps = 18/243 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKP 58
           M  L + +L V Y +    VR +DG+S +V  G +  + G SGCGK+TL+  L  ILR  
Sbjct: 1   MGGLTISDLVVEYSSGGYAVRPIDGLSLDVAPGSLVILLGPSGCGKTTLLSCLGGILRP- 59

Query: 59  PMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL--AR 116
               K GS  F   D+ +L    L K +  ++ I+ Q A N ++    +++++  L  A 
Sbjct: 60  ----KSGSIKFDDVDITTLEGAALAKYRRDKVGIVFQ-AFNLVSSLTALENVMVPLRAAG 114

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
               A R+  E+L    L  V L  R+    P ++SGG +QR  +  +  L+P L++ADE
Sbjct: 115 VSRAAARKRAEDL----LIRVNLGERMKHR-PGDMSGGQQQRVAVARAIALDPQLILADE 169

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ LD      V+ L+    Q   V  ++  THD  +L  +ADRV+ +   +V    P 
Sbjct: 170 PTAHLDFIQVEEVLRLIRSLAQGDRV--VVVATHDSRML-PLADRVLELMPAQVSPNQPP 226

Query: 237 EEV 239
           E V
Sbjct: 227 ETV 229


>pir||H72342 ABC transporter, ATP-binding protein - Thermotoga maritima  (strain
           MSB8) >gi|4981229|gb|AAD35787.1|AE001742_2 (AE001742)
           ABC transporter, ATP-binding protein [Thermotoga
           maritima]
           Length = 228
           
 Score = 87.0 bits (212), Expect = 3e-16
 Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 12/229 (5%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           AL++V NL   Y      V A+ G++  +  GE   + G SG GK+TL++ L     P  
Sbjct: 3   ALIEVHNLWKEYNGKEK-VTALKGINLRINTGEFVVILGPSGSGKTTLLNCLSGVDRPTR 61

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G+ I  G DL +L  +E  + +   +  + Q+  N +     I+++   L       
Sbjct: 62  ---GTVIIHGTDLYTLSEEERTRFRAENMGFVFQF-FNLVPVLTAIENVELPLLILG--V 115

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
           +R+E  E   E L  V L+ +  D +P ELSGG +QR  +  + + NP ++ ADE T AL
Sbjct: 116 NRKEARERAFEILRKVGLAHK-CDRFPEELSGGEKQRVAIARAIVHNPKVIWADEPTGAL 174

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           D  T R++I+LL    +     +++ VTHD  +  + ADRV+ +  G++
Sbjct: 175 DNETGRMIIDLLMEMKEN---STLVVVTHDERIAEK-ADRVIRIRDGQI 219


>pir||C69223 anion permease - Methanobacterium thermoautotrophicum  (strain
           Delta H) >gi|2622017|gb|AAB85418.1| (AE000867) anion
           permease [Methanobacterium thermoautotrophicum]
           Length = 357
           
 Score = 86.6 bits (211), Expect = 4e-16
 Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 26/250 (10%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M+ LD+ NL +       +V  VD     +  G+   + G +G GKS  + +++    P+
Sbjct: 1   MSFLDIDNLEIDLGE---FVVRVD--ELHLSRGDYLVIIGPTGSGKSIFLETIMGFFEPI 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G+    G DL +LP +E       ++SI+  Y  + L P   +++ +      +G 
Sbjct: 56  S---GTISLDGADLTTLPPEE------RDVSIV--YQDHCLFPHMTVEENI-----AYGL 99

Query: 121 ADRREVEELLRERLSMVKLS---PRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
             + E++E +  ++  +        V + YP  LSGG  QRA++  + ++NP LL+ DE 
Sbjct: 100 RKQTEMKENIHRQVHEIAAMMGIDHVLNRYPGTLSGGELQRASIARAIIVNPRLLLMDEP 159

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
            SALD  T ++ +  L   +++    ++I VTHDL  +  ++++V VM  GK++++G  E
Sbjct: 160 FSALDQRT-KISLRKLIADIRDNFETTVIHVTHDLDDIWWLSNKVAVMNHGKIIQMGKKE 218

Query: 238 EVLENPAHPY 247
           EV+  P+ PY
Sbjct: 219 EVINKPS-PY 227


>dbj|BAB03338.1| (AB035453) ABC transporter [Staphylococcus aureus]
           Length = 253
           
 Score = 86.2 bits (210), Expect = 5e-16
 Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 23/237 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA+L+V+ L   Y T       +  ++  + EGE   + G SG GK+TL++ L      +
Sbjct: 1   MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGSSGSGKTTLLNVL----SSI 56

Query: 61  EY-KGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD------IVWD 113
           +Y   GS   KG+ L  L   EL  I+  ++  I Q   N L+ T  +K+       V  
Sbjct: 57  DYISQGSITLKGKKLEKLSNKELSDIRKHDIGFIFQ-EYNLLH-TLTVKENIMLPLTVQK 114

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
           L +EH         E + E L+++ +S    D YP ELSGG RQR +   + +  P ++ 
Sbjct: 115 LDKEH----MLNRYEKVAEALNILDIS----DKYPSELSGGQRQRTSAARAFITLPSIIF 166

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           ADE T ALD  + + +++ L   M E    +II VTHD  +    A+RV+++  G++
Sbjct: 167 ADEPTGALDSKSTQDLLKRLTR-MNEAFKSTIIMVTHD-PVAASYANRVVMLKDGQI 221


>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
           Methanobacterium thermoautotrophicum
           >gi|1419078|emb|CAA63958.1| (X94292) cbiO
           [Methanobacterium thermoautotrophicum]
           Length = 277
           
 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 16/243 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTL-VHSLILRKPP 59
           M +++  N+R  Y  P G   A+ G+ F   +GEV  + G +G GKSTL +H   + +P 
Sbjct: 1   MKIIEAVNIRYTY--PDG-TEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPT 57

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G  +  G+++    +  L K++  ++ I+ Q   + L   +  +D+ +       
Sbjct: 58  ----SGKVLVDGKEI-DYSKSGLIKVR-QKVGIVFQNPDDQLFAPRVDEDVAFGPLNMG- 110

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
             D  EVEE +++ L  V +S    D  P  LSGG ++R  +     + PD++I DE TS
Sbjct: 111 -LDEDEVEERVKDALRKVGMSGTRTD--PHHLSGGEKKRVAIAGILAMKPDIMILDEPTS 167

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD      ++ LLH   +EG+  +II  THD+ L    +DR+ ++  G+++  G   +V
Sbjct: 168 GLDPRGASQILRLLHELNEEGM--TIIISTHDVDLAPLYSDRIYIISGGEIISEGTPGDV 225

Query: 240 LEN 242
             +
Sbjct: 226 FSD 228


>pir||T47012 hypothetical protein [imported] - Yersinia pestis
           >gi|4106600|emb|CAA21355.1| (AL031866) ORF32, len:, 236
           aa, hypothetical ABC transporter, similar to many, eg:
           E. coli YBBA_ECOLI (228 aa), 44.0% identity in 225 aa
           overlap, Fasta scores: opt: 611, E(): 0 [Yersinia
           pestis]
           Length = 237
           
 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 17/231 (7%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A+++ R+L  Y R   G V A++ ++  +  GE   + G SG GK+TL++ L       E
Sbjct: 16  AVIETRHL--YKR--FGQVTALEDINIRINRGEFVAIMGASGSGKTTLMNILTCLDTVSE 71

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G  +  G D   L  +  R+ +  ++ ++  +    L P     + +      H   
Sbjct: 72  ---GQVLLDGIDAAGLDEEGRRQFRADKIGLV--FQQFHLIPYLTALENIMLAQHYHSVV 126

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
           D    EE  R+ L  V ++PR+  + P +LSGG +QR  +  + +  P ++ ADE T  L
Sbjct: 127 D----EEAARQVLEQVGMTPRMGHL-PSQLSGGEQQRVCIARALVNQPPIIFADEPTGNL 181

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           D   ++ V+ELL+H  ++G  ++I+ VTH+   L  +ADRV+ +  GK ++
Sbjct: 182 DEENEQRVLELLNHIHRQG--RTIVMVTHN-PDLSCVADRVIRLQHGKYLD 229


>pir||C82526 ABC transporter ATP-binding protein XF2695 [imported] - Xylella
           fastidiosa (strain 9a5c)
           >gi|9107936|gb|AAF85492.1|AE004075_7 (AE004075) ABC
           transporter ATP-binding protein [Xylella fastidiosa]
           Length = 228
           
 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 14/238 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M++L   N+   Y  P G++ A+D VSF V EGE+  V G SG GKSTL+  + L + P 
Sbjct: 1   MSVLSFDNVSKQY--PDGHL-ALDDVSFSVAEGEMLFVTGHSGAGKSTLLKLIQLDERPT 57

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G  +F   +L+++     R+I +    +   Y  + L     + D V  L      
Sbjct: 58  Y---GEVLFDDLNLLNV---RGRQIPFHRRQVGAVYQEHRLLMDYSVGDNV-ALPLVLRG 110

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             R E+ + +   L  V L+ R +   P ELS G +QR  +  + +  P LL+ADE T  
Sbjct: 111 IPRAEIGKQVCSVLERVSLAHR-SRALPSELSAGEQQRVGIARAIISEPRLLVADEPTGN 169

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV-EIGPME 237
           LD T    +++L       G   S++ V+HDLALL+++  RV+++  G++V +I P +
Sbjct: 170 LDPTLAEEIMQLFVELPARG--TSVLVVSHDLALLKKMRKRVLILDHGRLVDDISPQD 225


>pir||S75960 nitrate transport protein D-1 - Synechocystis sp. (strain PCC 6803)
           >gi|1001320|dbj|BAA10807.1| (D64006) nitrate transport
           protein NrtD [Synechocystis sp.]
           Length = 282
           
 Score = 85.4 bits (208), Expect = 8e-16
 Identities = 67/233 (28%), Positives = 111/233 (46%), Gaps = 15/233 (6%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           A L + N+   Y T  G    ++ V+  V EGE   V G SGCGKSTL++ +     P +
Sbjct: 22  AFLTIENVSKVYPTAKGPYTVLENVNLTVNEGEFICVIGHSGCGKSTLLNMVSGFASPTD 81

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              GS    G+ +     D  R + +   +++P   + AL       D V      H   
Sbjct: 82  ---GSVQVGGKIITEPGPD--RMVVFQNYALLPW--LTALENVYIAVDAV------HSQK 128

Query: 122 DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSAL 181
              E   + ++ L+MV L+  + D  P ++SGGM+QR ++  +  + P++LI DE   AL
Sbjct: 129 TEAEKRAIAKDHLAMVGLTDSM-DKKPGQISGGMKQRVSIARALAIRPEVLILDEPFGAL 187

Query: 182 DVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           D  T+  + E L     +    +++ +THD+     +ADR+++M  G    IG
Sbjct: 188 DAITKEELQEELLQIWNDHRC-TVLMITHDIDEALFLADRLVMMTNGPHANIG 239


>gb|AAF99694.1|AF267498_4 (AF267498) ABC transporter OrfX [Streptococcus mutans]
           Length = 246
           
 Score = 85.0 bits (207), Expect = 1e-15
 Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVR-AVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPP 59
           M  + V +L+  Y+T  G    A+  ++F V EGE   + GESG GKSTL++ L     P
Sbjct: 1   MTYIGVSHLKKVYKTQEGLTNEALKDITFSVQEGEFIAIMGESGSGKSTLLNILACMDYP 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G  IF    L  +  +E    +   +  I Q   N LN      +++  +     
Sbjct: 61  ---SSGHIIFNNYQLEKVKDEEAAVFRSRHIGFIFQN-FNLLNIFNNKDNLLIPVIISGS 116

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
             +    E+ LR+  ++V +   ++  YP ELSGG +QR  +  + ++NPDL++ADE T 
Sbjct: 117 KVN--SYEKRLRDLAAVVGIESLLSK-YPYELSGGQQQRLAIARALIMNPDLILADEPTG 173

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
            LD  T + ++ LL +   +   K+I+ VTH        A+RV+ +  G +
Sbjct: 174 QLDSKTSQRILNLLSNINAKR--KTILMVTHS-PKAASYANRVLFIKDGVI 221


>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima  (strain
           MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
           ABC transporter, ATP-binding protein [Thermotoga
           maritima]
           Length = 265
           
 Score = 84.7 bits (206), Expect = 1e-15
 Identities = 73/242 (30%), Positives = 121/242 (49%), Gaps = 41/242 (16%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M +L V++L+ +Y    G   AVDG+SFEV +GE+F + G +G GK+T +  +  LRK  
Sbjct: 1   MMILRVKDLKKFY----GEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRK-- 54

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
              K    I        LP ++                   L P  R+K+I+ DL ++ G
Sbjct: 55  ---KDSGEIELNGTFTYLPEEK------------------KLYPYLRVKEII-DLFKKIG 92

Query: 120 --YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
             + ++  +E L R R   + L+ +V +     LS GMR    + +    N DL I DE 
Sbjct: 93  KNFNEKNCLELLERFR---IDLNEKVTN-----LSHGMRTILYLSLVLSENVDLYILDEP 144

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T  LD   +  +++ +     EG  KS+++ +H LA + +IADRV +M  GK++  G ++
Sbjct: 145 TWGLDPIVRNEILDRIRSLTFEG--KSVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLD 202

Query: 238 EV 239
           ++
Sbjct: 203 DI 204


>pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyrococcus abyssi
           (strain Orsay) >gi|5457805|emb|CAB49295.1| (AJ248284)
           ABC transporter, ATP-binding protein [Pyrococcus abyssi]
           Length = 280
           
 Score = 84.7 bits (206), Expect = 1e-15
 Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 22/249 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTL---VHSLILRK 57
           M +++V N+   Y     Y  ++  V+  V +GE  G+ G SG GKST    ++ LI   
Sbjct: 1   MNIIEVENVSFKYGNSKAY--SLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58

Query: 58  PPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVW----D 113
              E++G   +           D L   ++S   +  +  +   NP  ++ ++       
Sbjct: 59  INGEFEGNVFV-----------DGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVA 107

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
            A E+   +R E+   +R  L +VKL  +  + +P  LSGG +QR  +    ++ P +L+
Sbjct: 108 FALENLGVEREEMWRRIRWALKLVKLWDK-REEFPPNLSGGEKQRLAIASVLVMKPKVLV 166

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            DE TS LD   +  V+ L+    +E  + +II V H+   L + ADR++V   G+VV  
Sbjct: 167 LDEPTSQLDPLGREEVLSLVRLLNKEEKI-TIILVEHNTDFLLEHADRIVVFDGGRVVME 225

Query: 234 GPMEEVLEN 242
           G  EEV EN
Sbjct: 226 GKPEEVFEN 234


>gb|AAF43494.1|AF130119_1 (AF130119) oligopeptide permease D [Mycoplasma bovis]
           Length = 156
           
 Score = 84.7 bits (206), Expect = 1e-15
 Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 5/130 (3%)

Query: 189 VIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVLENPAHPYT 248
           V+ L     QE  + SII ++H+++++ +  + + VMYAGK+VE G  +++  NPAHPYT
Sbjct: 3   VLALFEQIRQEYNI-SIILISHNISVVAKFCEYIYVMYAGKIVERGTRKDIFTNPAHPYT 61

Query: 249 QLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPFAMEDCRDVEPKLVKVG 308
             L++++P        ERL  I G P  + N P G  F  R  FA+E   + EP L+++ 
Sbjct: 62  WALISAIP----ENDDERLFSIQGTPPDMANLPIGDPFAPRNDFALEIDYEKEPPLIEIN 117

Query: 309 RDHYAACHLL 318
             H AA  LL
Sbjct: 118 SHHKAATWLL 127


>pir||A82974 probable ATP-binding component of ABC transporter PA5376 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9951699|gb|AAG08761.1|AE004950_4 (AE004950) probable
           ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa]
           Length = 392
           
 Score = 84.7 bits (206), Expect = 1e-15
 Identities = 74/256 (28%), Positives = 130/256 (49%), Gaps = 18/256 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL-----IL 55
           + LLD    R       G V  V+    +V  GE+  + G SG GKS+L+  +     + 
Sbjct: 21  LKLLDQGLGRAEILKRTGQVLGVEDACLDVNRGEICVLMGLSGSGKSSLLRCINGLNKVS 80

Query: 56  R-KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL 114
           R K  +E++G        D+ +     L+ ++   ++++  +   AL P   + + V   
Sbjct: 81  RGKLLIEHEGSQV-----DIANCSPATLKAMRTKRIAMV--FQKFALMPWLTVAENV-GF 132

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
             E       E ++L+ E+L +V LS +  D  P  LSGGM+QR  +  +  ++ D+L+ 
Sbjct: 133 GLEMQGRPAAERKKLIDEKLELVGLS-QWRDKRPDSLSGGMQQRVGLARALAMDGDILLM 191

Query: 175 DEITSALD-VTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
           DE  SALD +  Q++  ELL   +Q  + K+I+FV+HDL    +I  R+ +M  G++++ 
Sbjct: 192 DEPFSALDPLIRQQLQDELL--VLQRQLHKTIVFVSHDLDEALKIGTRIAIMKDGRIIQH 249

Query: 234 GPMEEVLENPAHPYTQ 249
           G  EE++ +PA  Y +
Sbjct: 250 GKPEEIVLSPADDYVR 265


>gi|11499941 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
           >gi|7445691|pir||D69545 ABC transporter, ATP-binding
           protein homolog - Archaeoglobus fulgidus
           >gi|2650733|gb|AAB91301.1| (AE001113) ABC transporter,
           ATP-binding protein [Archaeoglobus fulgidus]
           Length = 254
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 83/269 (30%), Positives = 132/269 (48%), Gaps = 30/269 (11%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +L V NL V     VG  + +  V+  + EGE F + G +G GKSTL+++LI   P  
Sbjct: 1   MGVLRVVNLGV----KVGEKKILKNVNLFIKEGETFVLFGPNGSGKSTLLNALI-GNPSY 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTK----RIKDIVWDLAR 116
           +   G  +FK  D+ +LP +E  K+    + I  Q      NP K    ++ D++   AR
Sbjct: 56  KVTSGRILFKKVDITNLPTNERVKL---GIGIAFQ------NPPKISGVKLIDVLRYCAR 106

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
             GY + + +E  L E++ M     R  +M     SGG  +R+ ++   L+NPDL++ DE
Sbjct: 107 VGGYGEDKILE--LAEKMRMTDHLYREINM---GFSGGEVKRSELLQLMLMNPDLVLLDE 161

Query: 177 ITSALDVTTQRVVIE----LLHHFMQEG-IVKSIIFVTHDLALLRQI-ADRVMVMYAGKV 230
             S +D+    ++ E    LL    +EG   KS I +TH   +L  + AD   ++Y G++
Sbjct: 162 PDSGVDLENVALIGEAIRTLLERDKEEGERTKSGIIITHQGHILDYVDADYAAILYNGRI 221

Query: 231 VEIGPMEEVLEN-PAHPYTQLLLNSLPRM 258
             IG  +++L     H Y   L   L  M
Sbjct: 222 ACIGEPKDILNQIRNHGYEGCLAKCLANM 250


>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima  (strain
           MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
           ABC transporter, ATP-binding protein [Thermotoga
           maritima]
           Length = 293
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 31/243 (12%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M++++VR+L  YY    G  R V+GV+F V EGE+FG  G +G GK+T +  L+    P 
Sbjct: 1   MSVVEVRDLTKYY----GKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFP- 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQY--SELSIIPQYAMNAL--NPTKRIKDIVWDLAR 116
               G A   G+D++   ++  + + Y   E+S  P+  +           + + WD  +
Sbjct: 56  --DSGLAEIFGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASFYEKVDWDYVK 113

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
           E       + ++ ++                  ELS G +++  +V + +  P LLI DE
Sbjct: 114 ELCGVFSLDTKKRIK------------------ELSMGNKKKVAIVQALMHRPKLLILDE 155

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
            T+ LD   Q    E+L +  ++G   ++ F +H L+ + ++ DRV ++  G+++ +  +
Sbjct: 156 PTNGLDPIVQNTFFEILKNEKEKG--TTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKV 213

Query: 237 EEV 239
           E +
Sbjct: 214 ENL 216


>gb|AAG18646.1| (AE004970) amino acid ABC transporter, ATP-binding protein; YvrO
           [Halobacterium sp. NRC-1]
           Length = 221
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 66/231 (28%), Positives = 112/231 (47%), Gaps = 17/231 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M+++++  +   Y T    V A+ GV F    GE+  V G SG GKST+++ + L   P 
Sbjct: 1   MSIIELEGVVKRYETGAETVEALKGVDFSAARGEMVTVVGPSGSGKSTMLNMIGLLDSP- 59

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQ--YAMNALNPTKRIK-DIVWDLARE 117
               GS    G+D+     DE  + + +EL  + Q  + +  L   + ++   +WD +  
Sbjct: 60  --TAGSVTLDGQDVTGFSEDERTEERRAELGFVFQSFHLLPMLTAVENVELPSMWDTS-- 115

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
               DR +    L ER   V L  R+    P ELSGG +QR  +  S +  P++L+ADE 
Sbjct: 116 ---VDRHDRAVDLLER---VGLGDRLTHT-PGELSGGQQQRVAIARSLINEPEILLADEP 168

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAG 228
           T  LD  T   ++  +    +E  + +++ +THD   L + +DR + +  G
Sbjct: 169 TGNLDQETGGTILTEMQRLTEEENI-AVVAITHD-TQLEEFSDRAVNLVDG 217


>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
           solfataricus]
           Length = 371
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 70/245 (28%), Positives = 118/245 (47%), Gaps = 11/245 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M  + V NL   ++     V+AVD VS  +  G  FGV G SG GK+T +  +  L +P 
Sbjct: 1   MTTIRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPT 60

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
             Y     I+   + +S PR  +   +   ++++  +   AL P   + D +     +  
Sbjct: 61  SGY-----IYFDNEAVSSPRRVMMSPEKRGIAMV--FQNWALYPNMTVFDNI-AFPLKLA 112

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              + ++E  ++E    + LS  V + YP ELSGG  QR  +  + + +P +L+ DE  S
Sbjct: 113 KVPKDKIENKVKEVSEELGLS-GVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFS 171

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD   +     L+    +E  + ++I V+HD A +  IA++  V+  GK  +IG   E+
Sbjct: 172 NLDAQIRESARALVRKIQRERKLTTLI-VSHDPADIFAIANKAGVIVNGKFAQIGTPTEI 230

Query: 240 LENPA 244
            E PA
Sbjct: 231 YEYPA 235


>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
           Methanobacterium thermoautotrophicum (strain Delta H)
           >gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
           (glutamine transport ATP-binding protein)
           [Methanobacterium thermoautotrophicum]
           Length = 220
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 17/235 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  ++VR+LR  + +  G +RA++GV+ EV  GE   + G SG GKSTL++ +     P 
Sbjct: 1   MKAIEVRDLRKSFDS--GRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVP- 57

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G+    GRDL S  RD L +++  E+  + Q      N T      +   A +H  
Sbjct: 58  --DSGTICVAGRDL-SRERD-LSRLRAEEIGFVFQLHNLIPNLTALENVEIPMFAVKH-- 111

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
                +EE   E L  V L+ + A   P ELSGG RQR  +  +   +P +++ADE T +
Sbjct: 112 ---ENMEERAMELLEYVDLADK-AHRKPTELSGGERQRVAIARALANDPSIILADEPTGS 167

Query: 181 LDV-TTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIG 234
           LD  T+QRV+ +L      EG+  +++ VTH+   +  +A R + +  G +V+ G
Sbjct: 168 LDSRTSQRVLRKLRELQEDEGV--TLVVVTHE-PDVAAMASRTIRILDGVIVDDG 219


>pir||B70849 hypothetical protein Rv0073 - Mycobacterium tuberculosis  (strain
           H37RV) >gi|2808730|emb|CAA16254.1| (AL021428)
           hypothetical protein Rv0073 [Mycobacterium tuberculosis]
           Length = 330
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 72/227 (31%), Positives = 121/227 (52%), Gaps = 18/227 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKP 58
           M  L ++NL V Y +    +R ++G++ +V  G +  + G SGCGK+TL+  L  ILR  
Sbjct: 1   MGDLSIQNLVVEYYSGGYALRPINGLNLDVAAGSLVMLLGPSGCGKTTLLSCLGGILRP- 59

Query: 59  PMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDL--AR 116
               K G+  F   D+ +L   EL   + +++ I+ Q A N +     +++++  L  A 
Sbjct: 60  ----KSGAIKFDEVDITTLQGAELANYRRNKVGIVFQ-AFNLVPSLTAVENVMVPLRSAG 114

Query: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
               A RR  EEL    L+ V L+ R+ +  P +LSGG +QR  +  +  L+P L++ADE
Sbjct: 115 MSRRASRRRAEEL----LARVNLAERM-NHRPGDLSGGQQQRVAVARAIALDPPLILADE 169

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVM 223
            T+ LD      V+ L+   + +G  + ++  THD  +L  +ADRV+
Sbjct: 170 PTAHLDFIQVEEVLRLIRE-LADG-ERVVVVATHDSRML-PMADRVV 213


>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
           >gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
           hypothetical ATP-binding transport protein [Pyrococcus
           horikoshii]
           Length = 308
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 20/240 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  ++V  L   Y    G  +A+D +SF V EG VFG  G +G GK+T + S++    P 
Sbjct: 1   MYAIEVEKLTKSY----GKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIP- 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTK-RIKDIVWDLAREHG 119
               G     G D+   P     +     L  +P+ A      T  R  D      R   
Sbjct: 56  --DSGDVRILGYDIFKEPLKAKER-----LGFLPENATIYEELTAWRNLDFFASFYRMSK 108

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
               + +EELL+  + +  +  R A  +    S GMRQR  +  + + +P+LLI DE TS
Sbjct: 109 QEKEKRIEELLK-LVGLWDVRYRKAKTF----SKGMRQRLLLAQALINDPELLILDEPTS 163

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD    R+V +++    ++G  K++ F +H L+ + ++AD+V ++  GK+  +G +EE+
Sbjct: 164 GLDPEGARLVKDIIREQRKQG--KTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221


>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
           >gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
           protein [Pyrococcus abyssi]
           Length = 305
           
 Score = 83.1 bits (202), Expect = 4e-15
 Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 24/242 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M ++++ NL   Y    G  +AVD +S EV +G +FG  G +G GK+T + S++    P 
Sbjct: 1   MKVIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIP- 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVW---DLARE 117
               GS    G D+   P     +     L  +P+      N T   +   W   D    
Sbjct: 56  --DSGSVRLLGYDIFKEPIKAKER-----LGFLPE------NATIYEELTAWRNLDFFAS 102

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
                ++E E+ + E L +V L   V        S GM+QR  +  + + +P+LLI DE 
Sbjct: 103 FYNIPKQEKEKRIEELLKLVGLWD-VRYRKVKSFSKGMKQRLLLAQALINDPELLILDEP 161

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           TS LD    R+V +++    ++G  K++ F +H L+ + ++AD+V ++  GK+  +G +E
Sbjct: 162 TSGLDPQGARLVKDIILEQKKQG--KTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLE 219

Query: 238 EV 239
           E+
Sbjct: 220 EI 221


>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
           >gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
           sp. NGR234]
           Length = 371
           
 Score = 82.7 bits (201), Expect = 5e-15
 Identities = 69/257 (26%), Positives = 126/257 (48%), Gaps = 24/257 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  + +RN+   Y    G +  +  +SF + +GE   + G SGCGKSTL+  L      +
Sbjct: 17  MTDVTIRNVTKRY----GALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLA----GL 68

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E   G  +  G D+++      R  +  +++I+  +   AL P   + + +   A +   
Sbjct: 69  EEISGGDLLMGADVIND-----RPAKERDMAIV--FQNYALYPHMTVAENM-GFALKLRK 120

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             R E++E + +  +++ L  ++ D YP  LSGG RQR  M  + + +P + + DE  S 
Sbjct: 121 RPRAEIDERVDKAAAILGLG-KLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSN 179

Query: 181 LDV---TTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           LD       R  I+ LH    + +  + ++VTHD      +AD+++VM  G+V ++G   
Sbjct: 180 LDAKLRVQMRAEIKALH----QRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPL 235

Query: 238 EVLENPAHPYTQLLLNS 254
           E+ + PA+ +    + S
Sbjct: 236 ELYDRPANIFVAGFIGS 252


>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
           resistance ATP-binding protein (drrA-2) [Pyrococcus
           abyssi]
           Length = 318
           
 Score = 82.3 bits (200), Expect = 7e-15
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 21/245 (8%)

Query: 1   MALLDVRNLRVYY--RTP-----VGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL 53
           M  ++V+NLR  Y  + P     + +  A+ G++F V +GE+FG+ G +G GK+T +  L
Sbjct: 1   MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60

Query: 54  ILRKPPMEYKGGSAIFKGRDLMSLPRDELRKIQ-YSELSIIPQYAMNALNPTKRIKDIVW 112
                 +E   G A   G D++   R+  ++I   +E      + + A    +    I  
Sbjct: 61  TTL---LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY- 116

Query: 113 DLAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
                  Y  ++  EE +R  L MV L  R  D+  +  S GM+QR  +  + + +P++L
Sbjct: 117 -------YVPKKVAEERIRNLLHMVGLWDRKDDLV-MNYSRGMKQRLAIAKALINDPEVL 168

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
             DE T  LDV +   V EL+   ++E   K+++  TH +    ++ DR+ ++  G+++ 
Sbjct: 169 FLDEPTLGLDVQSAIFVRELIKKLVEEE-KKTVLLTTHYMHEAEELCDRIAIIDHGRIIA 227

Query: 233 IGPME 237
           +   E
Sbjct: 228 LDTPE 232


>emb|CAC05880.1| (AL391754) putative ABC transporter ATP-binding protein
           [Streptomyces coelicolor]
           Length = 229
           
 Score = 82.3 bits (200), Expect = 7e-15
 Identities = 75/231 (32%), Positives = 108/231 (46%), Gaps = 19/231 (8%)

Query: 2   ALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPME 61
           +LL    LR  Y    G   A+DG  F +  GEV  V G SG GKSTL+H L    PP  
Sbjct: 7   SLLSADQLRKAY----GPTLALDGAEFSIHPGEVVAVMGPSGSGKSTLLHCLAGIVPP-- 60

Query: 62  YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGYA 121
              G+  + GR+L ++   +   ++ S+   + Q+    L P     + V    R +G  
Sbjct: 61  -DSGTITYNGRELSAMSDAQRSALRRSDFGFVFQFGQ--LVPELTCVENVALPLRLNG-T 116

Query: 122 DRREVEELL---RERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
            R+E E       ERL +  L  +     P E+SGG  QR  +  S + NP +L ADE T
Sbjct: 117 SRKEAERAALSWMERLEVDDLRKK----RPGEVSGGQGQRVAVARSLVTNPRVLFADEPT 172

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGK 229
            ALD      V+ELL          +++ VTH+ A +   +DR +V+  GK
Sbjct: 173 GALDSLNGERVMELLTD-AARSTNAAVVLVTHE-ARVAAYSDREIVVRDGK 221


>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
           jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
           transport ATP-binding protein (cbiO) [Methanococcus
           jannaschii]
           Length = 279
           
 Score = 81.9 bits (199), Expect = 9e-15
 Identities = 65/243 (26%), Positives = 126/243 (51%), Gaps = 15/243 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTL-VHSLILRKPP 59
           M +++ ++L  Y+R P G    + G++F+V +GE+  + G +G GKSTL +H   + +P 
Sbjct: 1   MYIVETKDL--YFRYPDG-TAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPT 57

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G  + KG+ +    +  L +++ +   +          PT + +D+ +       
Sbjct: 58  K----GEVLIKGKPI-KYDKKSLVEVRKTVGLVFQNPDDQIFAPTVK-EDVAFGPLNLG- 110

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              + EVE+ ++E L  V +     +  P  LSGG ++R  +     + P++++ DE T+
Sbjct: 111 -LPKEEVEKRVKEALKAVGMEG-FENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTA 168

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD      +++LL+   ++G+  +II  THD+ L+   AD+V VMY GK+++ G  +EV
Sbjct: 169 GLDPVGASKIMKLLYDLNKKGM--TIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEV 226

Query: 240 LEN 242
             +
Sbjct: 227 FSD 229


>pir||T35994 probable ABC-type transport system ATP-binding chain - Streptomyces
           coelicolor >gi|5459389|emb|CAB50747.1| (AL096839)
           putative ABC transporter ATP-binding subunit
           [Streptomyces coelicolor A3(2)]
           Length = 254
           
 Score = 81.9 bits (199), Expect = 9e-15
 Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 19/245 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L++R+L V           + GV   V +GE   + G +G GKSTL +SL    P  
Sbjct: 1   MATLEIRDLHVTVEADNATKEILKGVDLTVKQGETHAIMGPNGSGKSTLAYSLA-GHPKY 59

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
              GG+    G D++ +  DE  +   + L +  QY +     +      V +  R    
Sbjct: 60  TITGGTVTLDGEDVLEMSVDERAR---AGLFLAMQYPVEVPGVS------VSNFLRTSAT 110

Query: 121 ADRREVEEL------LRERLSMVKLSPRVADMYPVE-LSGGMRQRATMVVSTLLNPDLLI 173
           A R E  +L      ++E +  + + P  A+    E  SGG ++R  ++   LL P + I
Sbjct: 111 AVRGEAPKLRHWVKEVKEAMERLNMDPAFAERNVNEGFSGGEKKRHEILQLELLKPKVAI 170

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQI-ADRVMVMYAGKVVE 232
            DE  S LDV   RVV E ++   + G V +++ +TH   +LR I  D V V   G++ E
Sbjct: 171 LDETDSGLDVDALRVVSEGVNRVRETGEVGTLL-ITHYTRILRYIKPDYVHVFANGRIAE 229

Query: 233 IGPME 237
            G  E
Sbjct: 230 SGGAE 234


>pir||E83248 probable ATP-binding component of ABC transporter PA3187 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9949305|gb|AAG06575.1|AE004742_11 (AE004742)
           probable ATP-binding component of ABC transporter
           [Pseudomonas aeruginosa]
           Length = 386
           
 Score = 81.5 bits (198), Expect = 1e-14
 Identities = 67/273 (24%), Positives = 123/273 (44%), Gaps = 24/273 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L++RNL   Y +  G    +  +  ++  GE   + G SGCGKSTL++ +   +   
Sbjct: 1   MATLELRNLHKSYGS--GLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLE--- 55

Query: 61  EYKGGSAIFKGRDLMSL-PRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
              GG+ +  G+D+  + P+D           I   +   AL PT  +++ +       G
Sbjct: 56  SITGGAILVDGQDISGMSPKDR---------DIAMVFQSYALYPTMSVRENI-----AFG 101

Query: 120 YADRREVEELLRERLSMVKLSPRVADMY---PVELSGGMRQRATMVVSTLLNPDLLIADE 176
              R+  +  + E ++ V    ++  +    P +LSGG +QR  M  +    P + + DE
Sbjct: 102 LKIRKMPQAAIDEEVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDE 161

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             S LD    RV +      M + +  + ++VTHD      + D+V VM  G + + G  
Sbjct: 162 PLSNLDAKL-RVEMRTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTP 220

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRERLSG 269
           +++  +PA+ +    + S P   +  + +R  G
Sbjct: 221 QQIYNDPANLFVASFIGSPPMNFIPLRLQRRDG 253


>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
           solfataricus]
           Length = 353
           
 Score = 80.8 bits (196), Expect = 2e-14
 Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 21/248 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  + V+N+   ++   G V A+D V+  +  GE FG+ G SG GK+T +  +     P 
Sbjct: 1   MVRIIVKNVSKVFKK--GKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPS 58

Query: 61  E---YKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAM--NALNPTKRIKDIVWDLA 115
               Y     +     L+  P D    + +   ++ P      N   P   +K       
Sbjct: 59  TGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMK------- 111

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
                  + E+ + + E   ++ +   V + +P ELSGG +QR  +  + + +P LL+ D
Sbjct: 112 -----MSKEEIRKRVEEVAKILDIH-HVLNHFPRELSGGQQQRVALARALVKDPSLLLLD 165

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGP 235
           E  S LD   +     L+   +Q  +  +++ V+HD A +  IADRV V+  GK+V++G 
Sbjct: 166 EPFSNLDARMRDSARALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGK 224

Query: 236 MEEVLENP 243
            E++ +NP
Sbjct: 225 PEDLYDNP 232


>gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]
           Length = 342
           
 Score = 80.4 bits (195), Expect = 3e-14
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 24/261 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L +R++R  +    G    + GVS E+  GE     G SGCGKSTL+  +   +   
Sbjct: 1   MAELQLRDIRKSF----GAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLE--- 53

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           E   G+  F G+         + ++  S   I   +   AL P   + + +     +   
Sbjct: 54  EITSGTLAFDGQ--------IVNQLTPSRRGIAMVFQSYALYPHMTVYENM-AFGMQLAG 104

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
            D+++  + +     M++L+P + +  P +LSGG RQR  +  + + +P + + DE  S 
Sbjct: 105 KDKQQCRKRVEAAAEMLQLTPYL-ERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSN 163

Query: 181 LDVTTQ---RVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           LD   +   R+ I  LH  M +    ++I+VTHD      +ADR+ V+  G V +IG   
Sbjct: 164 LDAALRVATRLEIAKLHRSMHK---TTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPL 220

Query: 238 EVLENPAHPYTQLLLNSLPRM 258
           E+ E P   +    + S P+M
Sbjct: 221 ELYETPNSVFVAGFIGS-PKM 240


>pir||E69098 phosphate transport system ATP-binding - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2622862|gb|AAB86201.1| (AE000929) phosphate
           transport system ATP-binding [Methanobacterium
           thermoautotrophicum]
           Length = 253
           
 Score = 79.6 bits (193), Expect = 5e-14
 Identities = 68/259 (26%), Positives = 114/259 (43%), Gaps = 27/259 (10%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  ++V +L VY+         +  ++ ++ +  V  + G SGCGKST + +L      +
Sbjct: 4   MYRIEVEDLNVYFDE----AHILKDINLKIPKNTVTALIGPSGCGKSTFIRTLNRMNDVI 59

Query: 61  E--YKGGSAIFKGRDLMSLPRD--ELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA- 115
                 G     G+D+     D  ELRK          +  M    P    K I  ++A 
Sbjct: 60  SGFRHEGHVYLDGKDIYDPDMDVVELRK----------KVGMVFQKPNPFPKSIFENVAY 109

Query: 116 --REHGYADRREVEELLRERLSMVKLSPRVADMYP---VELSGGMRQRATMVVSTLLNPD 170
             R HGY DR  +EE + E L    L   V D      + LSGG +QR  +  +  + P+
Sbjct: 110 GLRVHGYDDRDFIEERVEESLRAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAIEPE 169

Query: 171 LLIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           +++ DE  SALD  +   + +L+H    +    +II VTH++    +++        G++
Sbjct: 170 VILMDEPCSALDPISTTKIEDLIHKLKND---YTIIIVTHNMQQATRVSKYTAFFLHGEI 226

Query: 231 VEIGPMEEVLENPAHPYTQ 249
           VE G  E++   P    T+
Sbjct: 227 VESGLTEQIFIEPRDKRTE 245


>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
           Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
           (AP000001) 375aa long hypothetical multiple
           sugar-binding transport ATP-binding protein [Pyrococcus
           horikoshii]
           Length = 375
           
 Score = 78.8 bits (191), Expect = 8e-14
 Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           + + +V+ + ++ R   G V AV  +S E+ +GE   + G SGCGK+T +  +   + P 
Sbjct: 2   IGMAEVKLINIWKR--FGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT 59

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD-IVWDLAREHG 119
                  I+   +L++ P   +  +   E  +   +   AL P   + D I + L     
Sbjct: 60  R----GQIYIEDNLVADPEKGVF-VPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRK- 113

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
              ++E+++ +RE   M+ L+  + +  P ELSGG RQR  +  + +  P + + DE  S
Sbjct: 114 -VPKQEIDKRVREVAEMLGLT-ELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLS 171

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD    RV +      +Q  +  + I+VTHD      + DR+ VM  G++ ++G  +EV
Sbjct: 172 NLDAKL-RVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEV 230

Query: 240 LENPAHPYTQLLLNSLP 256
              P + +    + S P
Sbjct: 231 YYKPVNTFVAGFIGSPP 247


>pir||S63613 probable ATP-binding protein cymD - Klebsiella oxytoca
           >gi|854231|emb|CAA60003.1| (X86014) cymD [Klebsiella
           oxytoca]
           Length = 376
           
 Score = 78.4 bits (190), Expect = 1e-13
 Identities = 68/264 (25%), Positives = 117/264 (43%), Gaps = 32/264 (12%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA + +R +   Y    G+ +AV G+  E+ +GE     G SGC KST +  +   +   
Sbjct: 1   MATVSLRKIEKRYEN--GF-KAVHGIDLEIHDGEFMVFVGPSGCAKSTTLRMIAGLE--- 54

Query: 61  EYKGGSAIFKGRDLMSLP-RDELRKIQYSELSIIPQYAMN-----ALNPTKRIKDIVWDL 114
           +  GG      R +  LP +D    + +   ++ P   +       L   KR KD +   
Sbjct: 55  DISGGEIYIGNRKVNDLPPKDRGIAMVFQNYALYPHKTVFDNMAFGLKMQKRPKDEI--K 112

Query: 115 AREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIA 174
            R    A++ E+ ELL  +              P E+SGG RQR  +  + +  PD+ + 
Sbjct: 113 RRVEDAAEKLEITELLYRK--------------PKEMSGGQRQRVAVGRAIVRKPDVFLF 158

Query: 175 DEITSALDV---TTQRVVIELLHHFM-QEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           DE  S LD     + R+ I  LH  + +EG   ++I+VTHD      + DR+ V+  G +
Sbjct: 159 DEPLSNLDAKLRVSMRMKIAQLHRSLKEEGHPATMIYVTHDQTEALTLGDRICVLNHGNI 218

Query: 231 VEIGPMEEVLENPAHPYTQLLLNS 254
           +++    ++   P + +    + S
Sbjct: 219 MQVDTPTDLYNYPNNKFVASFIGS 242


>gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]
           Length = 336
           
 Score = 78.4 bits (190), Expect = 1e-13
 Identities = 63/249 (25%), Positives = 120/249 (47%), Gaps = 24/249 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M++L + +L + +    G  + +  +   V + E+  + G SGCGK+TL+ ++    P  
Sbjct: 1   MSVLTINHLNLNF----GSTKVLQNLHLAVNQNEIICLLGASGCGKTTLLKAIAGLLP-- 54

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
             + G     G  L S      + ++  ++ +I  +   AL P   + D +     + G 
Sbjct: 55  -IEQGDIHLAGECLKS------KAVEERQIGLI--FQDYALFPHLTVADNI-----QFGL 100

Query: 121 ADRREVEE--LLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
           +   +V++  +  + LS+V L       +P ELSGG +QR  +  +    P+LL+ DE  
Sbjct: 101 SKLPKVQQKAITEKMLSVVHLQG-FESRFPHELSGGQQQRVAIARALACQPELLLLDEPF 159

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           S +D  T+  +I+ +   ++   V + IFVTH        AD++ VM  GK+++ G   E
Sbjct: 160 SNIDSQTRYAMIQEIKQILKSQNVPA-IFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE 218

Query: 239 VLENPAHPY 247
           +  +P +P+
Sbjct: 219 LYHSPVNPF 227


>pir||A70338 ABC transporter - Aquifex aeolicus >gi|2983088|gb|AAC06694.1|
           (AE000689) ABC transporter [Aquifex aeolicus]
           Length = 219
           
 Score = 77.6 bits (188), Expect = 2e-13
 Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 19/233 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +++++N++  Y  P G + A+ GVS  V EGE  GV G SG GKSTL+H +     P 
Sbjct: 1   MKVVELKNVKKIY--PDGTI-ALKGVSLSVEEGEFLGVMGPSGSGKSTLLHLIGGLDKPS 57

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQ--YAMNALNPTKRIKDIVWDLAREH 118
           E   G     G+++  L  DEL +++  +++ + Q  Y +   +  + +  ++ +L    
Sbjct: 58  E---GIVKVFGKEINHLDEDELAEMRKRKIAYVFQFYYLLEDFSVLENL-TLIGEL---- 109

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             A  +  ++   E L  ++LS R+ +  P +LSGG +QR  +  + ++ P L++ADE T
Sbjct: 110 --AGIKNPKKKALELLDFLRLSHRI-NHKPYQLSGGEQQRVAIGRALMVEPKLILADEPT 166

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231
             LD      + EL     ++GI  + +  TH+ + L+    R++ +  G++V
Sbjct: 167 GNLDSKEGFRIFELFKELNEKGI--TFVVATHNDS-LKPFFGRIINLRDGEIV 216


>gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPase [Pseudomonas aeruginosa]
           Length = 269
           
 Score = 77.6 bits (188), Expect = 2e-13
 Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 24/270 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA L++RNL   Y +  G    +  +  ++  GE   + G SGCGKSTL++ +   +   
Sbjct: 1   MATLELRNLHKSYGS--GLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLE--- 55

Query: 61  EYKGGSAIFKGRDLMSL-PRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
              GG+ +  G+D+  + P+D           I   +   AL PT  +++ +       G
Sbjct: 56  SITGGAILVDGQDISGMSPKDR---------DIAMVFQSYALYPTMSVRENI-----AFG 101

Query: 120 YADRREVEELLRERLSMVKLSPRVADMY---PVELSGGMRQRATMVVSTLLNPDLLIADE 176
              R+  +  + E ++ V    ++  +    P +LSGG +QR  M  +    P + + DE
Sbjct: 102 LKIRKMPQAAIDEEVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDE 161

Query: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
             S LD    RV +      M + +  + ++VTHD      + D+V VM  G + + G  
Sbjct: 162 QLSNLDAKL-RVEMRTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTP 220

Query: 237 EEVLENPAHPYTQLLLNSLPRMGVHYKRER 266
           +++  +P + +    + S P   +  + +R
Sbjct: 221 QQIYNDPDNLFVASFIGSPPMNFIPLRLQR 250


>dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system (permease)
           [Bacillus halodurans]
           Length = 271
           
 Score = 77.3 bits (187), Expect = 2e-13
 Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 28/248 (11%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M  ++ +NL + Y   +     ++ +   + +GE+  + G +GCGKSTL+ SL  L KP 
Sbjct: 1   MFSIETKNLTLGYDDTI----IIEELDLNIPKGEITVLIGGNGCGKSTLLRSLARLLKP- 55

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
              + G+ + +G  +  L   E+     ++L+I+PQ       P       V+ L ++  
Sbjct: 56  ---QSGAVLLEGSSIQQLATKEVA----TKLAILPQ------GPEAPEGLTVYQLIKQGR 102

Query: 120 YADR-------REVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLL 172
           Y  +        + EE + + L   +L+  +AD     LSGG RQRA + ++   + +++
Sbjct: 103 YPHQGLFKKWTSKDEEKVMQALEATRLT-ELADRPVDALSGGQRQRAWIAMTLAQDTEII 161

Query: 173 IADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVE 232
           + DE T+ LD+T Q  +++LL   + E   ++I+ V HDL L  + A  ++ +    V  
Sbjct: 162 LLDEPTTYLDLTHQIEILDLLFE-LNEREKRTIVMVLHDLNLACRYAHHLIAVKDRTVYA 220

Query: 233 IGPMEEVL 240
            G  EEV+
Sbjct: 221 QGKPEEVI 228


>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
           ATP-binding protein O [Methanobacterium
           thermoautotrophicum]
           Length = 280
           
 Score = 76.9 bits (186), Expect = 3e-13
 Identities = 67/243 (27%), Positives = 118/243 (47%), Gaps = 15/243 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTL-VHSLILRKPP 59
           M +++  ++R  Y  P G   A+ G++F    GEV  + G +G GKSTL +H   + +P 
Sbjct: 3   MRIIEAVDIRYTY--PDG-TEALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGILQPT 59

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G  +  G +L    +  L K +  ++ I+ Q   + L   +  +D+ +       
Sbjct: 60  ----SGKIMIDGEEL-DYSKSGLIKAR-QKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGL 113

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
             D  EVEE +R+ L  V +    +   P   SGG ++R  +     + PD+++ DE TS
Sbjct: 114 SED--EVEERVRDALQKVGMLGYESKP-PHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTS 170

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD      ++ LLH+  +EG+  +II  THD+ L    +DR+ ++  G+++  G   EV
Sbjct: 171 GLDPRGASQILRLLHNLNEEGM--TIIISTHDVDLAPLYSDRIYIISDGEIISTGAPSEV 228

Query: 240 LEN 242
             +
Sbjct: 229 FSD 231


>dbj|BAB07632.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
           halodurans]
           Length = 253
           
 Score = 76.9 bits (186), Expect = 3e-13
 Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 9/230 (3%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           MA+L+  N+   Y T +     + G+   V +GE   + G SG GK+TL++ L       
Sbjct: 1   MAILEATNIHKSYGTKLNKQEVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVL---SSID 57

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           +   GS   +G ++  L   EL + +   L  I Q   N L+     ++I+  L+     
Sbjct: 58  KLSNGSIKIEGSEMTRLKEKELAQFRKKHLGFIFQ-EYNLLDTLTVKENILLPLSITK-- 114

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             R+  +E  ++  + + +   + D YP E+SGG +QRA+   + +  P ++ ADE T A
Sbjct: 115 IPRKAADEKFKQVATELGIY-EIKDKYPNEISGGQKQRASAARAFIHEPSIIFADEPTGA 173

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
           LD  +   ++  L   + E +  +I+ VTHD  +      RV+ +  G++
Sbjct: 174 LDSKSASDLLGKLQQ-LNEKLRATIVMVTHD-PVAASYCSRVIFIKDGQI 221


>gb|AAK42084.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
           Length = 530
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 68/244 (27%), Positives = 114/244 (45%), Gaps = 15/244 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLV---HSLILRK 57
           M  +++R+L+V Y         +D +  E  EGE   + G SG GKSTLV   + +I   
Sbjct: 1   MKFVEIRDLQVTYMGKTKPSIVIDKLDIE--EGESVLITGRSGSGKSTLVSVINGVIPHL 58

Query: 58  PPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE 117
              E KG   +F G D+ + P  E+ +   + L      A N       I ++ + +  E
Sbjct: 59  INAEVKGEVRVF-GLDIKTTPTSEISRYVGTLLQDPDTQAFNYTV----IDEVAFGV--E 111

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
           +    R E+   + E + +  +S  + D     LSGG  QR  +     + P  LI DE 
Sbjct: 112 NYMVSREEMINRVEESMKICGIS-HLRDREINTLSGGELQRTVLASVLAMRPKALILDEP 170

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           TS +D    R ++EL+  F  EGI  S++ V H +  +    DR++V+ +GK+      +
Sbjct: 171 TSNIDPQGTREILELVKTFRSEGI--SLVLVEHKIERVLPFIDRIIVVESGKIAVDIKKD 228

Query: 238 EVLE 241
           E+++
Sbjct: 229 EIID 232


>dbj|BAB06418.1| (AP001516) ABC transporter (ATP-binding protein) [Bacillus
           halodurans]
           Length = 251
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 17/217 (7%)

Query: 1   MALLDVRNLRVYY-----RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLIL 55
           M +L+  +L   Y     RT VG    +D VS  V +G+   + G SG GK+TL++ L  
Sbjct: 1   MIILEANHLHKVYGEGGTRTTVG----LDQVSLRVKKGDFLAIMGPSGSGKTTLLNLLSG 56

Query: 56  RKPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLA 115
              P     G+ +  G D+  +  ++L   +  EL  + Q   N L+     ++I+  + 
Sbjct: 57  IDAPTS---GTIVINGDDISKMDGNQLALFRRKELGFVFQ-EFNLLDSLTVKENIMVPMI 112

Query: 116 REHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIAD 175
            E   A  + +EE  +E +S+  +   +A+ YP  LSGG +QR  +  + +  P +L AD
Sbjct: 113 LEKKSA--KHMEEKAKEVMSIFGIDG-LANKYPYHLSGGQQQRVAVSRALVNEPSILFAD 169

Query: 176 EITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDL 212
           E T  LD  + +V++E     +      +I+ VTHD+
Sbjct: 170 EPTGNLDSKSSKVIMECFEQIVNH-YQTTILLVTHDV 205


>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
           [Streptomyces coelicolor A3(2)]
           Length = 312
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 74/270 (27%), Positives = 130/270 (47%), Gaps = 37/270 (13%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLI-LRKPP 59
           M +++V +LR  Y    G    VDGVSF V EGE+FGV G +G GK+T V  +  LR P 
Sbjct: 13  MPVIEVTDLRKSY----GGRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGLRVP- 67

Query: 60  MEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHG 119
                G     G D    P  + R++  +E+ +  Q   + L P   +++ +   A  + 
Sbjct: 68  ---DAGRVRVTGLD----PVADHRRV--AEV-LGAQLQQSELQPKLTVREALELYAAFYP 117

Query: 120 Y-ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             AD R     L ERL +V +     D    +LSGG +QR  + ++ + +P +++ DE+T
Sbjct: 118 KPADWRP----LAERLDLVPM----LDTRFAKLSGGQKQRLFIALALVGDPRVVVLDELT 169

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEE 238
           + LD   +R   +L+      G+  +++ VTH +   +++ DR+ V+  G++  +     
Sbjct: 170 TGLDPRARRETWQLIEDIRAGGV--TVLLVTHFMEEAQRLCDRIAVIDRGRIAALDTPAG 227

Query: 239 VLE----------NPAHPYTQLLLNSLPRM 258
           ++            P+ P  +  L +LP +
Sbjct: 228 LIRRSTGATVISFTPSAPLDEADLRALPEL 257


>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
           fulgidus] >gi|7445660|pir||C69485 daunorubicin
           resistance ATP-binding protein (drrA) homolog -
           Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
           (AE000972) daunorubicin resistance ATP-binding protein
           (drrA) [Archaeoglobus fulgidus]
           Length = 398
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 70/242 (28%), Positives = 112/242 (45%), Gaps = 23/242 (9%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  ++V NL   +    G   AV GVSF+V  GE+F   G +G GK+T VH L     P 
Sbjct: 77  MYAIEVENLVKKF----GDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPT 132

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
               G A   G D++   R+  R+I      I+ Q      +P+       ++    HG 
Sbjct: 133 S---GKAFVAGLDVVREAREVRRRI-----GIVFQ------DPSVDRDLTAYENMLVHGG 178

Query: 121 A---DRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
                 +E++E +   L  V+L     D      SGGM++R  +  S L +P++L  DE 
Sbjct: 179 VYGLKGKELKEKIERLLKFVELW-EFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEP 237

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           T  LD  T+  V   +    +E  + +I   TH +    ++ADRV ++  G+++  G +E
Sbjct: 238 TIGLDPQTRAHVWSYIEAMKEEQDM-TIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVE 296

Query: 238 EV 239
           E+
Sbjct: 297 EL 298


>gb|AAK42217.1| ABC transporter [Sulfolobus solfataricus]
           Length = 530
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 15/251 (5%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLV---HSLILRK 57
           M  +++R+L+V Y         VD +  E  EGE   + G SG GKSTLV   + +I   
Sbjct: 1   MKFVEIRDLQVTYMGKDKPSIVVDKLDIE--EGESVLITGRSGSGKSTLVSVINGVIPHL 58

Query: 58  PPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLARE 117
              E KG   +F G D+ S P  E+ K   + L      A N       I ++ + +  E
Sbjct: 59  INAEIKGEVRVF-GFDVKSTPIHEISKYVGTLLQDPDTQAFNYTI----IDEVAFGV--E 111

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
           +    R E+ E + E + +  +S  + D     LSGG  QR  +     + P  LI DE 
Sbjct: 112 NYMISRDEMIERVEESMKIYGIS-HLRDREINTLSGGELQRTILASVLAMRPKALILDEP 170

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
           TS +D    R ++EL+  F  EGI  S++ V H +  +    DR++V+  GK+      +
Sbjct: 171 TSNIDPQGTREILELVKTFRSEGI--SLVLVEHKIERVLPFVDRIIVVEEGKIAVDVRKD 228

Query: 238 EVLENPAHPYT 248
           E+++     Y+
Sbjct: 229 EIVDKADFLYS 239


>pir||G71192 probable cobalt transport ATP-binding protein - Pyrococcus
           horikoshii >gi|3258251|dbj|BAA30934.1| (AP000007) 284aa
           long hypothetical cobalt transport ATP-binding protein
           [Pyrococcus horikoshii]
           Length = 284
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 22/249 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTL---VHSLILRK 57
           M +++V ++   Y     Y  ++  ++ E+ +GE  G+ G SG GKST    ++ LI   
Sbjct: 1   MNVIEVEDVSFRYGNSREY--SLRHINLEIRKGEFLGIIGPSGSGKSTFCLTLNGLIPHS 58

Query: 58  PPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVW----D 113
              E+ G   +           D L   ++S   +  +  +   NP  ++ ++       
Sbjct: 59  IAGEFHGNVIV-----------DGLNTREHSVSELSTKVGLVFQNPDSQLFNMTVLEEVA 107

Query: 114 LAREHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLI 173
            A E+   +R E+   +R  L +V+L  +  + +P  LSGG +QR  +    ++ P +L+
Sbjct: 108 FALENLGIERDEMWRRIRWALKLVRLWDK-REEFPPNLSGGEKQRLAIASVLVMKPKVLV 166

Query: 174 ADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            DE TS LD   +  V+ L+    +E  + +II V H+   L + ADR++V   G++V  
Sbjct: 167 LDEPTSQLDPLGREEVLGLIKLLNKEEKI-TIILVEHNTDFLLEHADRIVVFDKGRIVLE 225

Query: 234 GPMEEVLEN 242
           G  E+V EN
Sbjct: 226 GKPEDVFEN 234


>pir||T43920 YfuC protein [imported] - Yersinia enterocolitica
           >gi|619575|emb|CAA87396.1| (Z47200) YfuC protein
           [Yersinia enterocolitica]
           Length = 349
           
 Score = 75.7 bits (183), Expect = 7e-13
 Identities = 74/259 (28%), Positives = 118/259 (44%), Gaps = 30/259 (11%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M+ LD   +   Y++    VR ++G+  +V  G    + G SG GK+TL+  +   + P 
Sbjct: 1   MSTLDFNKIGKSYQS----VRVLEGIDLQVTAGSRTAIVGPSGSGKTTLLRIIAGFETP- 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSI--IPQYAMNALNPT-KRIKDIVWDLARE 117
               G  I +G  L     D+   +   +  I  +PQ    AL P      +I + L   
Sbjct: 56  --DSGKVILQGNPLF----DQSTHVPAHKRGIGFVPQDG--ALFPHFTAAGNIAYGLK-- 105

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
                +++    + + + MV L  R+A ++P E+SGG +QR  +  +    P L++  E 
Sbjct: 106 ---GSKQDKARRIDKLMEMVALDRRLAQLWPHEISGGQQQRVALARALGQRPALMLLVEP 162

Query: 178 TSALD----VTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEI 233
            S LD     +T++ V ELL    Q  I    I VTHD +     AD+V VM AGK+V +
Sbjct: 163 FSTLDTALRASTRKAVAELL---SQANIAS--ILVTHDQSEALSFADQVAVMRAGKLVHV 217

Query: 234 GPMEEVLENPAHPYTQLLL 252
           G  +E+   P    T   L
Sbjct: 218 GAPQELYLRPIDEPTATFL 236


>sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK)
           >gi|2338762|gb|AAC45769.1| (AF018073) sorbitol/mannitol
           transport ATP-binding transport protein; SmoK
           [Rhodobacter sphaeroides]
           Length = 332
           
 Score = 75.7 bits (183), Expect = 7e-13
 Identities = 64/261 (24%), Positives = 121/261 (45%), Gaps = 21/261 (8%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  + +RN++  +    G    +  +  ++ +GE     G SGCGKSTL+  +   +   
Sbjct: 1   MGKITLRNVQKRF----GEAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLE--- 53

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIK-DIVWDLAREHG 119
           +   G  +  GRD   +P         ++  +   +   AL P   +K +I + L     
Sbjct: 54  DVSDGQIMIDGRDATEMPP--------AKRGLAMVFQSYALYPHMTVKKNIAFPLRMAK- 104

Query: 120 YADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITS 179
             + +E+E  +     ++ L+    D  P +LSGG RQR  +  + +  P   + DE  S
Sbjct: 105 -MEPQEIERRVSNAAKILNLT-NYLDRRPGQLSGGQRQRVAIGRAIVREPAAFLFDEPLS 162

Query: 180 ALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEV 239
            LD    RV + L    + + +  ++I+VTHD      +AD+++V+ AG++ ++G    +
Sbjct: 163 NLDAAL-RVNMRLEITELHQSLETTMIYVTHDQVEAMTMADKIVVLNAGRIEQVGSPLTL 221

Query: 240 LENPAHPYTQLLLNSLPRMGV 260
             NPA+ +    + S P+M +
Sbjct: 222 YRNPANLFVAGFIGS-PKMNL 241


>gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter ATP-binding protein
           [Zymomonas mobilis]
           Length = 261
           
 Score = 75.7 bits (183), Expect = 7e-13
 Identities = 71/247 (28%), Positives = 112/247 (44%), Gaps = 19/247 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M LL  RNLR   +  V     +D +S    +GE+  + G +G GKSTL+  L+   PP 
Sbjct: 12  MTLLQARNLRYRRQKTV----ILDDISLSFHQGELTALLGINGAGKSTLLRLLLGLMPPD 67

Query: 61  EYKGGSAIFKGRDLMSLPRDEL-RKIQY--SELSIIPQYAMNALNPTKRIKDIVWDLARE 117
           E   G+   + + L ++ R  + R I Y   E   I  Y +  +    R+  I +   + 
Sbjct: 68  E---GNIFLQNKPLKAISRKTIARHIAYVPQEHKAIFPYTVEEVVSLGRLPYIAF--GQN 122

Query: 118 HGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEI 177
              +D++ V + L + L++  LS R       ELSGG RQ   +  +      +L+ DE 
Sbjct: 123 LSLSDKQAVRQAL-DYLNIASLSARPY----TELSGGERQSVLLARALAQGAPILVLDEP 177

Query: 178 TSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPME 237
            + LD   Q  +  LL     EG    I+  THD    RQI  R +++  G+++  G  +
Sbjct: 178 ETGLDFGQQLRLAVLLQKLADEGY--CIVATTHDPLRARQIFSRAILLQQGRIIADGAPK 235

Query: 238 EVLENPA 244
            VL   A
Sbjct: 236 SVLTRSA 242


>emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aureus]
           >gi|9501787|dbj|BAB03336.1| (AB035452) ABC transporter
           [Staphylococcus aureus]
           Length = 252
           
 Score = 75.3 bits (182), Expect = 9e-13
 Identities = 63/232 (27%), Positives = 116/232 (49%), Gaps = 14/232 (6%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M +L V+++   Y     + +A+  ++F++ +GE   + G SG GK+TL++ L       
Sbjct: 1   MTILSVQHVSKTYGKKHTF-QALKDINFDIQKGEFVAIMGPSGSGKTTLLNVL---SSID 56

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKD-IVWDLA-REH 118
           +   GS I  G++L  L +  L K +   L  I  +   ++ PT  +K+ I+  L+ ++ 
Sbjct: 57  QISSGSVIANGQELNKLNQKALAKFRKESLGFI--FQDYSILPTLTVKENIMLPLSVQKM 114

Query: 119 GYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEIT 178
             A   E  + +   L +  L  +    YP ELSGG +QR     + +  P ++ ADE T
Sbjct: 115 SKATMEENYKAITTALGIYDLGNK----YPSELSGGQQQRTAAARAFVHKPQIIFADEPT 170

Query: 179 SALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKV 230
            ALD  +   +++ L   M +    +I+ VTHD  +    A+RV+++  G++
Sbjct: 171 GALDSKSANDLLQRLEE-MNKSFDTTIVMVTHD-PVAASFAERVIMLKDGQI 220


>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
           ATP-binding protein [Vibrio cholerae]
           Length = 305
           
 Score = 75.3 bits (182), Expect = 9e-13
 Identities = 63/240 (26%), Positives = 118/240 (48%), Gaps = 17/240 (7%)

Query: 1   MALLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILRKPPM 60
           M  L++  LR   +T  G   A+ G+S +V +G+ + + G +G GKST +   I+     
Sbjct: 1   MYALEIEQLR---KTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIG--IISSLVN 55

Query: 61  EYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAREHGY 120
           +  G   +F G DL     D   ++   +L ++PQ      NP + ++ IV   A  +G 
Sbjct: 56  KTSGKVTVF-GYDL-----DSQLELAKQKLGLVPQEFN--FNPFETVEQIVLQQAGYYG- 106

Query: 121 ADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADEITSA 180
             +   +E  ++ L+ + L  + ++     LSGGM++R  +  + +  P LLI DE T+ 
Sbjct: 107 VPKALAKERAKKYLTQLDLWEKRSERAR-NLSGGMKRRLMIARALMHEPQLLILDEPTAG 165

Query: 181 LDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPMEEVL 240
           +D+  +R + E L     +G+  +II  TH L     +   + ++  G+++E   M+ +L
Sbjct: 166 VDIELRRSMWEFLKQINAQGV--TIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLL 223


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.322    0.141    0.411 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119136549
Number of Sequences: 2977
Number of extensions: 4919585
Number of successful extensions: 20024
Number of sequences better than 1.0e-10: 1075
Number of HSP's better than  0.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 982
Number of HSP's that attempted gapping in prelim test: 17435
Number of HSP's gapped (non-prelim): 1338
length of query: 322
length of database: 189,106,746
effective HSP length: 54
effective length of query: 268
effective length of database: 156,788,448
effective search space: 42019304064
effective search space used: 42019304064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)