BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0633 (PAB0633) DE:Hypothetical protein
(436 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75069 hypothetical protein PAB0633 - Pyrococcus abyssi (st... 856 0.0
pir||C64504 hypothetical protein MJ1637 - Methanococcus jannasch... 370 e-101
pir||C71171 hypothetical protein PH0567 - Pyrococcus horikoshii ... 275 9e-73
emb|CAC11862.1| (AL445065) conserved hypothetical protein [Therm... 89 8e-17
pir||H72273 conserved hypothetical protein - Thermotoga maritima... 81 3e-14
gb|AAK41406.1| Conserved hypothetical protein [Sulfolobus solfat... 76 1e-12
gb|AAK41695.1| Conserved hypothetical protein [Sulfolobus solfat... 76 1e-12
pir||D71115 hypothetical protein PH0691 - Pyrococcus horikoshii ... 72 1e-11
>pir||B75069 hypothetical protein PAB0633 - Pyrococcus abyssi (strain Orsay)
>gi|5458367|emb|CAB49855.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 436
Score = 856 bits (2188), Expect = 0.0
Identities = 436/436 (100%), Positives = 436/436 (100%)
Query: 1 MTKMVITMVQLEDYLIRLVAELPSRFDYVRKLRGRFILDELIERVNDYLEEGKTGTILLP 60
MTKMVITMVQLEDYLIRLVAELPSRFDYVRKLRGRFILDELIERVNDYLEEGKTGTILLP
Sbjct: 1 MTKMVITMVQLEDYLIRLVAELPSRFDYVRKLRGRFILDELIERVNDYLEEGKTGTILLP 60
Query: 61 GLRGTGKTTLLGQLYFYILSKTSEVVYIPVDELSLLGFNLYESIEKYIELFRPEKPIILL 120
GLRGTGKTTLLGQLYFYILSKTSEVVYIPVDELSLLGFNLYESIEKYIELFRPEKPIILL
Sbjct: 61 GLRGTGKTTLLGQLYFYILSKTSEVVYIPVDELSLLGFNLYESIEKYIELFRPEKPIILL 120
Query: 121 DEVHYDKKWELTLKVLHDRMRYLIIATGSSALRLRESPDLARRARHIDVKPLTFLEYHHL 180
DEVHYDKKWELTLKVLHDRMRYLIIATGSSALRLRESPDLARRARHIDVKPLTFLEYHHL
Sbjct: 121 DEVHYDKKWELTLKVLHDRMRYLIIATGSSALRLRESPDLARRARHIDVKPLTFLEYHHL 180
Query: 181 KGEKVKRIGLEALFEFNEDLLGKAIRKGLRYGEYERYLRLGSLPVALELSEREAYETIFM 240
KGEKVKRIGLEALFEFNEDLLGKAIRKGLRYGEYERYLRLGSLPVALELSEREAYETIFM
Sbjct: 181 KGEKVKRIGLEALFEFNEDLLGKAIRKGLRYGEYERYLRLGSLPVALELSEREAYETIFM 240
Query: 241 LVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERFSYERLSKTLGVSKSTVIELVR 300
LVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERFSYERLSKTLGVSKSTVIELVR
Sbjct: 241 LVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERFSYERLSKTLGVSKSTVIELVR 300
Query: 301 AFVRSGLLIEIPPVGSLTKKVRKSPKLKFLSPSMRASIVHKFESVDEAALLEDAVAFYLH 360
AFVRSGLLIEIPPVGSLTKKVRKSPKLKFLSPSMRASIVHKFESVDEAALLEDAVAFYLH
Sbjct: 301 AFVRSGLLIEIPPVGSLTKKVRKSPKLKFLSPSMRASIVHKFESVDEAALLEDAVAFYLH 360
Query: 361 SVGRLEYEPGKGGADFLLIRNGKRYVVEVGLGKDDSSQVKRSIKRLKAEKGIVIGKEFDV 420
SVGRLEYEPGKGGADFLLIRNGKRYVVEVGLGKDDSSQVKRSIKRLKAEKGIVIGKEFDV
Sbjct: 361 SVGRLEYEPGKGGADFLLIRNGKRYVVEVGLGKDDSSQVKRSIKRLKAEKGIVIGKEFDV 420
Query: 421 RDDILMIPWWGFLALI 436
RDDILMIPWWGFLALI
Sbjct: 421 RDDILMIPWWGFLALI 436
>pir||C64504 hypothetical protein MJ1637 - Methanococcus jannaschii
>gi|1500537|gb|AAB99658.1| (U67604) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 473
Score = 370 bits (940), Expect = e-101
Identities = 214/449 (47%), Positives = 286/449 (63%), Gaps = 20/449 (4%)
Query: 8 MVQLEDYLIRLVAELPSRFDYVRKLRGRFILDELIERVNDYLEEGKTGTILLPGLRGTGK 67
MVQL DY++ +A+ P K + RF D L E+V+ Y+E K ILL GLRG GK
Sbjct: 25 MVQLNDYILNHIAKTPLILSRYNKEKKRFDYDILKEKVDKYIENDKKELILLYGLRGLGK 84
Query: 68 TTLLGQLYFYILSKT--SEVVYIPVDELSLLGFNLYESIEKYIELFR----PEKPIILLD 121
TTLL Q+Y Y K + V+Y +DEL L L ++++ Y E+F EK I+LLD
Sbjct: 85 TTLLSQIYHYARLKIEPNRVLYFSMDELKLNDIKLMDALKAYSEIFGINLYEEKIILLLD 144
Query: 122 EVHYDKKWELTLKVLHDRMRYLIIATGSSALRLRESPDLARRARHIDVKPLTFLEYHHL- 180
E+ Y++ W+L LK L+D IIATGSSAL+LRESPDLARRA H + P+TF EY +L
Sbjct: 145 EIQYERHWDLVLKNLYDTTNIFIIATGSSALKLRESPDLARRALHKPIYPMTFREYLYLT 204
Query: 181 KGEKVKRIGLEALFEFNEDLLGKAIRK---GLRYGEYERYLRLGSLPVALELSEREAYET 237
K K++ + E + N D K K + + ++YLR+GSLP ALE E E Y
Sbjct: 205 KNIKIESLFEEVILNNNLDNFKKVYAKVYSQILEEDVKKYLRIGSLPFALEDDELEVYNK 264
Query: 238 IFMLVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERFSYERLSKTLGVSKSTVIE 297
I+ ++ERI+YKD++EV+ FD TLD A KLL++LANPKGER+SYE L+ TL ++K T+I
Sbjct: 265 IYTMLERIIYKDVREVKEFDMETLDKAFKLLYLLANPKGERYSYESLANTLEIAKGTLIN 324
Query: 298 LVRAFVRSGLLIEIPPVGSLTKKVRKSPKLKFLSPSMRASIVHK----FESVDEAALLED 353
LV + LL +I P GS+ KKVRKS K+KFL ++ ++ HK + V +LLED
Sbjct: 325 LVDVLEKCELLFKIYPYGSMDKKVRKSQKIKFLPVPIKTALWHKMGVVIDDVCYGSLLED 384
Query: 354 AVAFYLHSVGR-----LEYEPGKGGADFLLIR-NGKRYVVEVGLGKDDSSQVKRSIKRLK 407
VAFYL+ + L YEP KGGADF+LI ++ V+EVGLGK S QV +S++R+K
Sbjct: 385 VVAFYLYLFCKKKGYSLSYEPKKGGADFILISPYMEKIVIEVGLGKKSSKQVLKSMERVK 444
Query: 408 AEKGIVIGKEFDVRDDILMIPWWGFLALI 436
A KGI+IG E V +IL IPW GFL LI
Sbjct: 445 ASKGIIIGDELKVEGNILYIPWKGFLLLI 473
>pir||C71171 hypothetical protein PH0567 - Pyrococcus horikoshii
>gi|3256973|dbj|BAA29656.1| (AP000002) 453aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 453
Score = 275 bits (695), Expect = 9e-73
Identities = 179/458 (39%), Positives = 269/458 (58%), Gaps = 37/458 (8%)
Query: 11 LEDYLIRLVAELPSRFDYV-----RKLRGRFILDELIERVNDYLEEGKTGTILLPGLRGT 65
+E+Y+ R++ R + + L R ++ +L+E + +L G+ ILL GLRG
Sbjct: 1 MEEYIRRILTLGRKRLEKFALKGGKPLPERPLIVKLMEEIRGFLGSGENRVILLYGLRGV 60
Query: 66 GKTTLLGQLYFYILSKTS--EVVYIPVDELSLLGFNLYESIEKYIELFRP------EKPI 117
GKTT+L QLY ++ + S ++Y VDE+ +LG+ L + E Y + E I
Sbjct: 61 GKTTMLAQLYLKLIGEVSGERILYASVDEIKMLGYRLKDVFESYEHIIGERLEELREPTI 120
Query: 118 ILLDEVHYDKKWELTLKVLHDRMRYL-IIATGSSALRLRESPDLARRARHIDVKPLTFLE 176
LLDEVHYD++W+L LKV +DR R L I+ATGSSA+ L+ S DLARRA+ + PLTF E
Sbjct: 121 FLLDEVHYDEEWDLALKVAYDRARNLMIVATGSSAIELKLSTDLARRAKRFHITPLTFTE 180
Query: 177 YHHLKG----EKVKRIGLEALFEFNEDLLGKAIRKG-LRYG--EYERYLRLGSLPVALEL 229
Y LKG E+VK++ L + + + IRK L + E ERYL GSLP+AL
Sbjct: 181 YLLLKGIRVNEEVKKVLKRLLLAGEVEGIEEEIRKTFLTFDPIEVERYLLYGSLPLAL-- 238
Query: 230 SEREAYETIFMLVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERFSYERLSKTLG 289
S RE E + +VERI+ DL ++ F L+ A L+ +LA+ GE +Y+RL+ LG
Sbjct: 239 SSREPLEETYSIVERIIRWDLAKM-GFSQEVLEKAFLLMLMLAS--GEALNYDRLTSRLG 295
Query: 290 VSKSTVIELVRAFVRSGLLIEIPPVGSLTKKVRKSPKLKFLSPSMRASIVHKFESVDE-- 347
+S+ + +L+ AF ++ + GSL K +RK+PK KFL+P +R SI++ F ++
Sbjct: 296 ISRPVLAKLLSAFENLEVIFPVRAYGSLGKAIRKTPKYKFLAPVIRTSILNHFGLLEVNE 355
Query: 348 ---AALLEDAVAFYLHSV-----GRLEYEPGKGGADFLLIRNGKRYVVEVGLGKDDSSQV 399
LLED VA YL+ + G + Y+ KGGADF+L R V+EVG GK QV
Sbjct: 356 KILGNLLEDVVALYLYIIARELSGSVTYDAEKGGADFILTTPIGRIVLEVGWGKKGKEQV 415
Query: 400 KRSIKRLKAEKGIVI-GKEFDVRDDILMIPWWGFLALI 436
KR++K++ AE+GI+I G +F ++ ++ +P FL ++
Sbjct: 416 KRTMKKIGAERGIIIHGGDFREKNGVIWLPKEWFLLML 453
>emb|CAC11862.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 441
Score = 89.3 bits (218), Expect = 8e-17
Identities = 94/380 (24%), Positives = 182/380 (47%), Gaps = 49/380 (12%)
Query: 57 ILLPGLRGTGKTTLLGQLYFYILSKTSE---VVYIPVDELSLLGFNLYESIEKYIELFRP 113
+L GLR GKTT++ Q+ +L +E ++Y DE S ++ E I Y E
Sbjct: 44 VLFYGLRRVGKTTIMYQIISDLLKDGTEPERILYFSFDESS---GDIDEMISLYAETVL- 99
Query: 114 EKPI-------ILLDEVHYDKKWELTLKVLHDRMRYL-IIATGSSALRLRE--SPDLARR 163
+KPI + LDEV + WE +K+ +D + + +GSS+L + + S LA R
Sbjct: 100 KKPITEAPRIYMFLDEVQKAEDWENRIKIFYDLYPNIKFVLSGSSSLNVLKGSSETLAGR 159
Query: 164 ARHIDVKPLTFLEYHHLKGEKVKRIGLEALFEFNEDLLGKAIRKGLRYGEYERYLRLGSL 223
+ ++PL+F E+ LKG +V + + D+L + + Y+ G
Sbjct: 160 IVLVKIEPLSFSEFCKLKGHEVPYEKVA----YARDILSPMLME---------YIEKGGF 206
Query: 224 PVALELSEREAYE----TIFMLVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERF 279
P + E + Y+ ++++RIV +D+ + F +D +L+ + G
Sbjct: 207 PELVW--ENDPYKIRSYVRSIVIDRIVTRDIPQ--EFGIRDMDLMRRLMETILMNPGVIL 262
Query: 280 SYERLSKTLGVSKSTVIELVRAFVRSGLLIEI-----PPVGSLTKKVRKSPKLKFLSPSM 334
+ +++S + G ++ T+ + +++ LI P V + ++K++K + +P+
Sbjct: 263 NLDKISSSFGRNRITISNFI-SYMEYAFLIRTVSNYRPGVEAASRKLKK---VYPYTPAF 318
Query: 335 RASIVHKFESVDEAALLEDAVAFYLHSVGRLEYEPGKGGADFLLIRNGKRYVVEVGLGKD 394
+++ ++ D L+E+A+A L S G + G DF+L G R +EV G
Sbjct: 319 YLAMLAPQDAYDAGKLMENAMAAIL-SPGYY-FRAGNTEIDFVLDHGGVRIPIEVKSGNY 376
Query: 395 DSSQVKRSIKRLKAEKGIVI 414
D S R++K+++++ GI++
Sbjct: 377 DISDFSRALKKMRSDSGILV 396
>pir||H72273 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981822|gb|AAD36340.1|AE001782_1 (AE001782)
conserved hypothetical protein [Thermotoga maritima]
Length = 387
Score = 80.8 bits (196), Expect = 3e-14
Identities = 97/382 (25%), Positives = 172/382 (44%), Gaps = 48/382 (12%)
Query: 57 ILLPGLRGTGKTTLLGQLYFYILSKTSEVVYIPVDELSLLGFNLYESIEKYIELFRPEKP 116
ILL G RG GKTT L +++ +Y+ DE+ LL L++ ++ ++ + P
Sbjct: 40 ILLYGPRGAGKTTFL-----LSMARKHGFLYVSGDEILLLDVPLHDLFQEIMKNY----P 90
Query: 117 IILLDEVHYDKKWELTLKVLHDRMRYLIIATG-SSALRLRES-PDLARRARHIDVKPLTF 174
I++DEVH K W LKVL+D +I T SS++ LR+ DL+RR I + ++F
Sbjct: 91 GIIIDEVHLLKNWSTILKVLYDSFPDKVIWTSDSSSVLLRKGISDLSRRFVLIRMPLMSF 150
Query: 175 LEYHHLKGEKVKRIGLEALFEFNEDLLGKAIRKGLRYGEYERYLRLGSLPVALELSEREA 234
E+ H + K R L + FE + D +A+++ + +Y G+ P +E + R
Sbjct: 151 REFIHFETGKTLR-KLSSPFEVSIDYAAEALKEVDLMSLFRKYRETGTRPFYVEGNFR-- 207
Query: 235 YETIFMLVERIVYKDLKEVRNFDASTLDSAMK-LLFVLANPKGERFSYERLSKTLGVSKS 293
E + ++++ +Y D+ MK ++ L + K + E + + GV K
Sbjct: 208 -EKLMNILQKAIYYDVPHFLGTVTENHLGVMKAIVGHLLHSKIPTINVESMCREWGVGKQ 266
Query: 294 TVIELVRAFVRSGLLIEIPPVGSLTKKVRKSPKLKFLSPSMRASIVHKFESVDEAALLED 353
+L++ + L+ I + K K K+ P+M + + + EA
Sbjct: 267 KFYQLLQT-MEEIELVNIVRKKRVEKPFSKGEKIFLSDPAMYYAFEGEIGNFREA----- 320
Query: 354 AVAFYLHSVGRLEYEPGKGGADFLLIRNGKRYVVEVGLGKDDSSQVKRSIKRLKAEKGIV 413
V F L +G++ + D++ + +EVG GK S+ K+S
Sbjct: 321 FVVFALKEIGKIYAVKNEEEGDYVF----EGIKIEVG-GK---SKKKKS----------- 361
Query: 414 IGKEFDVRDDI-----LMIPWW 430
+F +RDD+ +IP W
Sbjct: 362 --SDFVIRDDVDLPVRNVIPMW 381
>gb|AAK41406.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 432
Score = 75.7 bits (183), Expect = 1e-12
Identities = 90/422 (21%), Positives = 189/422 (44%), Gaps = 43/422 (10%)
Query: 40 ELIERVNDYLEEGKTGTILLPGLRGTGKTTLLGQLYFYILSKTSEVVY---IPVDELSLL 96
E +++ D LE+G +++ G++ +GK+T++ Q+ ++ K E + I E S
Sbjct: 27 EYSDQLLDLLEKGLAISVI--GVKRSGKSTIINQVVKKLIEKKGEDPFDTLIVNFEDSRF 84
Query: 97 G--------FNLYESIEKYIELFRPEKPIILLDEVHYDKKWELTLKVLHDRMRYLIIATG 148
G F+LYE ++ + + KP I LDEV K WE ++ + DR I+ +G
Sbjct: 85 GDIRTANDLFSLYELYKELRKKKKDSKPYIFLDEVQKIKGWEGFVRSIVDRKEANIVISG 144
Query: 149 SSALRLRESPDLARRARH--IDVKPLTFLEYHHLKGEKVKRIGLEALFEFNEDLLGKAIR 206
S+A +S RH ++V PL+F E+ K ++ E D++ K
Sbjct: 145 STASVNNKSVREVLAGRHLILEVFPLSFKEFLEFKNIRL---------ETELDMIAKESE 195
Query: 207 KGLRYGEYERYLRLGSLPVALELSEREAYETIFMLVERIVYKDLKEVRNFDASTLDSAMK 266
+ + EY Y G P+ + +ER+ + + L E I++KD+ + + + A
Sbjct: 196 IKVLFSEYLSY---GGFPLVVS-NERDKEKILLQLYEDIIFKDV--ISECNIRNEEEAKN 249
Query: 267 LLFVLANPKGERFSYERLSKTLGVSKSTVIELVRAFVRSGLLIEIPPVGSLTKKVRKSPK 326
L + G + + ++S++L + V + L+ + + ++ K K
Sbjct: 250 LAIFYISNVGNKIRFRKISRSLNIPFRNVQRYTECMKNAYLIFFVKALSPKLSEMAKYDK 309
Query: 327 LKFLSPSMRASIVHKFESVDEAALLEDAVAFYL---HSVGRLEYEPG-KGGADFLL-IRN 381
+ + ++++ + + +L E+ + L + + + Y G +G DF++ +++
Sbjct: 310 KVYCIDNGISNVLGYRLNQNIGSLFENLIFLELLRRYGINNVFYYRGRRGEVDFVVKVKD 369
Query: 382 GKRYVVEVGLGKDDSSQVKRSIK---RLKAEKGIVI----GKEFDVRDDIL-MIPWWGFL 433
R + +V D + + I+ +++ K +I E V DD++ ++ W +L
Sbjct: 370 EIREIYQVTYQLSDVERELKGIEEFLKIRKTKAYIITFDDEGEIKVGDDLVKVVKGWKWL 429
Query: 434 AL 435
L
Sbjct: 430 LL 431
>gb|AAK41695.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 410
Score = 75.7 bits (183), Expect = 1e-12
Identities = 90/424 (21%), Positives = 171/424 (40%), Gaps = 47/424 (11%)
Query: 14 YLIRLVAELPSRFDYVRKLRGRFILDELIERVNDYLEEGKTGTILLPGLRGTGKTTLLGQ 73
Y+ + L + D + + R +++ + + YLE IL G+R +GK+TL
Sbjct: 2 YIEEIKRVLSDQRDVLEEKMSRKLVERDVPNLLKYLEVPNALAIL--GVRRSGKSTLS-- 57
Query: 74 LYFYILSKTSEVVYIPVDELSLLGFN---LYESIEKYIELFRPEKPIILLDEVHYDKKWE 130
+L K + Y+ D+ N L + ++ EL+ + I+LDE+H K WE
Sbjct: 58 ---LLLLKRKKFAYVNFDDERFYNLNIGDLNKVLQAIYELYGVDVDYIVLDEIHNVKGWE 114
Query: 131 LTLKVLHDRMRYLIIATGSSALRLRESPDLARRARHIDVKPLTFLEYHHLKGEKVKRIGL 190
L + L D + +I + S L + L R + P +F EY K KV+
Sbjct: 115 LFVSRLRDVKKLIITGSNSKMLSGELATYLTGRHSDYILFPFSFQEYLKYKEVKVEYFST 174
Query: 191 EALFEFNEDLLGKAIRKGLRYGEYERYLRLGSLPVALELSEREAYETIFMLVERIVYKDL 250
+ +L E+Y +G P AL L + E + ++ I++KD+
Sbjct: 175 RVISTLKNEL--------------EKYTEVGGFPEALMLGK----EQVNVIYNDILFKDI 216
Query: 251 KEVRNFDASTLDSAMKLLFVLANPKGERFSYERLSKTLGVSKSTVIELVRAFVRSGLLIE 310
V + ++ + + + S ++K LG++K TV + + L
Sbjct: 217 --VSRYKIREIEKFREFARTVISYYSNEISLSSIAKILGLNKRTVEKWASGLREAYLTFF 274
Query: 311 IPPVG-SLTKKVRKSPKLKFLSPSMRASIVHKFESVDEAALLEDAVAF----YLHSVGRL 365
IP G L +++ + K+ + + +++ K D+ ++E+ VA L +L
Sbjct: 275 IPRYGEKLKQRLTYNKKVYVVDVGIVSNLAIK--GKDKGRIIENLVAIKLLRELQGEEKL 332
Query: 366 EYEPGKGGADFLLIRNGKRYVVEVGLGKDDSSQVKRSIKRLKAEKGIVIGKEFDVRDDIL 425
Y DF +N + V K ++ ++ +G++ G +L
Sbjct: 333 YYMRNNYEVDFYDEKNSRLIQVTYTSDKIENREI----------RGLIEGYRLTKAKKLL 382
Query: 426 MIPW 429
+I W
Sbjct: 383 IITW 386
>pir||D71115 hypothetical protein PH0691 - Pyrococcus horikoshii
>gi|3257099|dbj|BAA29782.1| (AP000003) 439aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 439
Score = 71.8 bits (173), Expect = 1e-11
Identities = 91/379 (24%), Positives = 154/379 (40%), Gaps = 53/379 (13%)
Query: 57 ILLPGLRGTGKTTLLGQLYFYILSKTSEVVYIPVDELSLLGFN-------LYESIEKYIE 109
I++ GLR TGKT LL Q ++ + +P++ L + F + + K +E
Sbjct: 44 IVVYGLRRTGKTYLLYQTMLKLMKEG-----LPIERLFYINFEDERLEDITGKDLSKIVE 98
Query: 110 LFRPEKP-----IILLDEVHYDKKWELTLKVLHDRMRYLIIATGSSALRLRESPDLARRA 164
L+ P + DEV WE ++ + +R I TGSS+ L + A R
Sbjct: 99 LYYKYNPDASLMYLFFDEVQNVPSWEKFVRRILERKNARIFITGSSSNLLSKEIATALRG 158
Query: 165 RHIDVK--PLTFLEYHHLKGEKVKRIGLEALFEFNEDLLGKAIRKGLRYGEYERYLRLGS 222
R + + PL+F E+ KG K F E L+ K RY E Y+ G
Sbjct: 159 RSLSFRLFPLSFREFLTFKGSK-----------FKEPLIEAERGKIKRY--LEEYVEYGG 205
Query: 223 LPVALELSEREAYETIFMLVERIVYKDLKEVRNFDASTLDSAMKLLFVLANPKGERFSYE 282
P ++ +T+ ++ I+YKDL + + + + L+ V+ R S
Sbjct: 206 FPEIVDYPPLLKIKTLQEYLDLIIYKDL--IERYGIEKIHAMKGLIRVITRNFARRSSIR 263
Query: 283 RL-----SKTLGVSKSTVIELVRAFVRSGLLIEIPPVG-SLTKKVRKSPKLKFLSPSMRA 336
+L S L +SKS + E G +I + + S + +R PKL
Sbjct: 264 KLHNMLSSLGLNLSKSKIYEYFSYLEDIGFIIPVRRLHFSEVESLRSIPKLYVADVGFPT 323
Query: 337 -----SIVHKFESVDEAALLEDAVAFYLHSVGRLE---YEPGKGGADFLLIRNGK-RYVV 387
I H+ E++ LL + RLE + KG DF+++ K + ++
Sbjct: 324 VLGVKDIGHRIENIVALELLRRK----YYQEPRLEIRYWMDSKGEVDFVVLTGFKVKELI 379
Query: 388 EVGLGKDDSSQVKRSIKRL 406
+V +D +R ++ L
Sbjct: 380 QVSYSIEDIETKQREVEAL 398
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.143 0.400
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152762360
Number of Sequences: 2977
Number of extensions: 6500691
Number of successful extensions: 18157
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 18134
Number of HSP's gapped (non-prelim): 8
length of query: 436
length of database: 189,106,746
effective HSP length: 57
effective length of query: 379
effective length of database: 154,992,987
effective search space: 58742342073
effective search space used: 58742342073
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 166 (69.1 bits)