BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0634 (PAB0634) DE:Hypothetical protein
(339 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9V050|Y634_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0634 >g... 670 0.0
sp|Q9V103|YJ45_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB1945 >g... 434 e-121
sp|O58276|Y541_PYRHO HYPOTHETICAL ATP-BINDING PROTEIN PH0541 >gi... 334 8e-91
sp|Q59053|YG59_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1659 >gi... 331 9e-90
sp|Q9UZE8|Y800_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0800 >g... 329 3e-89
sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439 >gi... 274 1e-72
sp|Q58049|Y632_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0632 >gi... 267 1e-70
sp|Q60380|Y074_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0074 >gi... 267 1e-70
sp|Q58697|YD01_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1301 >gi... 260 2e-68
sp|Q58416|YA10_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1010 >gi... 252 4e-66
sp|Q57611|Y147_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0147 >gi... 251 9e-66
sp|Q60388|Y075_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0075 >gi... 247 1e-64
sp|Q58211|Y801_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0801 >gi... 231 9e-60
sp|Q59004|YG09_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1609 >gi... 215 4e-55
gi|10954506 M. jannaschii predicted coding region MJECL15 [Metha... 210 1e-53
gi|10954505 M. jannaschii predicted coding region MJECL14 [Metha... 166 3e-40
sp|Q58412|YA06_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1006 >gi... 165 8e-40
sp|Q58476|YA76_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1076 >gi... 161 2e-38
sp|Q58042|Y625_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0625 >gi... 157 2e-37
gi|10954515 M. jannaschii predicted coding region MJECL26 [Metha... 152 7e-36
>sp|Q9V050|Y634_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0634 >gi|7517902|pir||C75069
hypothetical protein PAB0634 - Pyrococcus abyssi (strain
Orsay) >gi|5458368|emb|CAB49856.1| (AJ248286)
hypothetical protein [Pyrococcus abyssi]
Length = 339
Score = 670 bits (1711), Expect = 0.0
Identities = 339/339 (100%), Positives = 339/339 (100%)
Query: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP
Sbjct: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF
Sbjct: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
Query: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT
Sbjct: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
Query: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL
Sbjct: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
Query: 241 AETIKHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYRSLSE 300
AETIKHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYRSLSE
Sbjct: 241 AETIKHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYRSLSE 300
Query: 301 EILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDIIE 339
EILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDIIE
Sbjct: 301 EILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDIIE 339
>sp|Q9V103|YJ45_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB1945 >gi|7514286|pir||E75183
ATP-binding protein PAB1945 - Pyrococcus abyssi (strain
Orsay) >gi|5458058|emb|CAB49548.1| (AJ248284)
ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 335
Score = 434 bits (1104), Expect = e-121
Identities = 204/339 (60%), Positives = 269/339 (79%), Gaps = 6/339 (1%)
Query: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
MFF+RE+EL KLL+++ +EP+LITF+YGPINSGKTAL+ EFI+K+PD ++AFYINLR TP
Sbjct: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
IT Y DF+D+LFS+EF N +K LKEA+SLV+SAGKE G P+P + L +I E KPKNAF
Sbjct: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
Query: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
YI L+ EV++ GKRPILILDELQVIGDL+++G LIYE+FNFFIHLTKE+HLSHVF +T
Sbjct: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTIT 180
Query: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
SDSLF+ER+YSEAMLQGRA+YFLVDDF +TAL FLK+ GL+++EA L YFGGKP YL
Sbjct: 181 SDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPYL 240
Query: 241 AETIKHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYR-SLS 299
E IKHR+EL+++C++ L +RT Q+ Y +++KL F+ +E VP+ ++
Sbjct: 241 IEAIKHREELEDYCKKALAMRTRQVYSFAYGK-----RRIIKLLTEFKNKEEVPFTGKVT 295
Query: 300 EEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDII 338
+ AVK NILF +P++ +++PQGRLELLAI+ L ++
Sbjct: 296 RTLEEAVKANILFVDPLNGIIKPQGRLELLAIREALRML 334
>sp|O58276|Y541_PYRHO HYPOTHETICAL ATP-BINDING PROTEIN PH0541 >gi|7518700|pir||A71168
hypothetical protein PH0541 - Pyrococcus horikoshii
>gi|3256947|dbj|BAA29630.1| (AP000002) 321aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 321
Score = 334 bits (848), Expect = 8e-91
Identities = 169/335 (50%), Positives = 228/335 (67%), Gaps = 16/335 (4%)
Query: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
MFF+RE E+E+LL +S EPN++TFVYGPINSGKT L+ EF+K+ + ++ FYIN R+TP
Sbjct: 1 MFFDREEEIERLLEDISYEPNMVTFVYGPINSGKTTLIQEFLKRTSEKYVGFYINFRKTP 60
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
+ +Y +F VLFS F +++K +K+ +S++ GK P+P E+L I ++K+P NAF
Sbjct: 61 VANYEEFSRVLFS--FDSRIKMIKDVISIL---GKVNPWIPIPREVLNDILRDKEPINAF 115
Query: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
+Y+ ++EE+R +GK PIL+ DELQVI DLKV+GSLIY+LFNF IHL+KE+HL+HVF VT
Sbjct: 116 SYLREVLEEIRSSGKMPILVFDELQVIKDLKVNGSLIYQLFNFLIHLSKEAHLAHVFAVT 175
Query: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
SDSLFI ++ A L GRA YF V D E A+ FL LS++E+ LV YFGGKP YL
Sbjct: 176 SDSLFISEIFGNAKLSGRASYFPVYDLPEEKAIEFLLRLNLSEEESRLVVEYFGGKPSYL 235
Query: 241 AETIKHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYRSLSE 300
E KHR L+EWCER L LR +E+ L F +E V LSE
Sbjct: 236 VEAPKHRKHLREWCERELTLRA-----------REIRRFKSNLLLEFMDEEEVEVEELSE 284
Query: 301 EILWAVKRNILFAEPVDRVLRPQGRLELLAIKRIL 335
E + V NILF +P+ LRPQG+LELLAI++++
Sbjct: 285 EAINLVNANILFYDPLRGTLRPQGKLELLAIRKVI 319
>sp|Q59053|YG59_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1659 >gi|2129000|pir||A64507
hypothetical protein MJ1659 - Methanococcus jannaschii
>gi|1592240|gb|AAB99686.1| (U67606) M. jannaschii
predicted coding region MJ1659 [Methanococcus
jannaschii]
Length = 361
Score = 331 bits (839), Expect = 9e-90
Identities = 170/354 (48%), Positives = 243/354 (68%), Gaps = 16/354 (4%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIK-KLP-DDHIAFYINLRRT 59
FF+RE+E+ L++++S EPNLI F+YGPINSGKT L+ I+ KL D ++ FYINLR
Sbjct: 7 FFDREKEINYLVKVLSFEPNLIYFIYGPINSGKTTLIKHIIENKLDRDKYVVFYINLREH 66
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKE-AVSLVLSAGKET-------FGFPVPTELLARIT 111
I+ Y DF++VLF+ ++ LK+ +S + K G PVP L
Sbjct: 67 FISKYEDFIEVLFNTYEETFIEKLKKYLLSFINDLPKNIDVKSTILTGIPVPKNTLNEFL 126
Query: 112 KEKKPKNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKES 171
K +N F Y+ + E+++K GK+PILI+DELQ IGDLK++G LIYELFNFFI LTKE
Sbjct: 127 STKNSENVFEYLTKIFEDIKKKGKQPILIIDELQKIGDLKINGFLIYELFNFFIDLTKEK 186
Query: 172 HLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWN 231
HL HV ++SDSLFIERVY+E L+ R +Y+LVDDF +T FLK + +D+E ++VW+
Sbjct: 187 HLCHVLCLSSDSLFIERVYNEGTLKDRCKYYLVDDFDYKTTKAFLKKHNFNDEEIDIVWH 246
Query: 232 YFGGKPVYLAETIKHR---DELKEWCERMLKLRTSQILDELYALE---KELFEKVVKLFF 285
YFGGKP+ L E I+ + +++KE+C++ L++R Q+ D LY+LE KELFE+V+KLF
Sbjct: 247 YFGGKPIKLVEAIQEKLLGEDVKEFCKKSLRVRKRQLKDLLYSLEDDNKELFERVIKLFE 306
Query: 286 AFEKQESVPYRSLSEEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDIIE 339
F+ ++ + Y +SEEI+W VK+NILF + +L+PQ +L+LLAI+ ILD I+
Sbjct: 307 NFKNRDEIFYEKISEEIVWTVKKNILFVNIEEGILKPQSKLDLLAIREILDEIK 360
>sp|Q9UZE8|Y800_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0800 >gi|7520929|pir||B75101
probable ATP-binding protein PAB0800 - Pyrococcus abyssi
(strain Orsay) >gi|5458623|emb|CAB50111.1| (AJ248286)
hypothetical ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 326
Score = 329 bits (834), Expect = 3e-89
Identities = 170/337 (50%), Positives = 231/337 (68%), Gaps = 18/337 (5%)
Query: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
MFF+RE+ELE+L LVS++P++ITF YGPINSGKT L++EF K+LP ++I F INLR
Sbjct: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
I DF+ VLF KE + ++ K G P+P +L I + N F
Sbjct: 61 IREEKDFIKVLFMK---------KEESESIKNSYK---GIPIPEGILNEILE-----NPF 103
Query: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
++ EE+ +G+ P+LILDELQVIGDL++D LIY+LFNFF+ LTKE HL+HVFV T
Sbjct: 104 LFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVAT 163
Query: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
SDSLF+ERV+ EAML GR+ + LVDDF T L FL +NGLS++EA++ W+Y GGKP YL
Sbjct: 164 SDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSYL 223
Query: 241 AETI-KHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYRSLS 299
+ + + R ++++C+ LK RTSQILD LY L+ KV++L F + + + Y LS
Sbjct: 224 VDLLQRSRIRVEDYCKEALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITYGPLS 283
Query: 300 EEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILD 336
EEI+W+V+ NILFA+P +R LRPQGRLE AI+ L+
Sbjct: 284 EEIVWSVRNNILFADPRERKLRPQGRLEKHAIELALE 320
>sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439 >gi|2128324|pir||G64354
hypothetical protein MJ0439 - Methanococcus jannaschii
>gi|1591143|gb|AAB98434.1| (U67495) M. jannaschii
predicted coding region MJ0439 [Methanococcus
jannaschii]
Length = 361
Score = 274 bits (693), Expect = 1e-72
Identities = 154/351 (43%), Positives = 218/351 (61%), Gaps = 21/351 (5%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDD--HIAFYINLRRT 59
FFNRE+E+ ++L ++ P+L+ FVYGP+NSGKTAL+ E I D ++ FYINLR
Sbjct: 15 FFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGI 74
Query: 60 PITSYSDFVDVLFSV--EFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPK 117
I+ Y DF++VLF E R V+ +K + V S G P P L I K+K K
Sbjct: 75 FISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSL----CGIPTPKNTLEEILKKKTTK 130
Query: 118 NAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVF 177
N F YI ++ +++K GK+PI+I+DELQ IGD+K++G LIYELFN+F+ LTKE HL HVF
Sbjct: 131 NVFKYITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDLTKELHLCHVF 190
Query: 178 VVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLK-------NNGLSDDEAELVW 230
++SDSLFIE+VYSEAML+ R +Y LVDDF +ETAL+F+ N LSDDE EL++
Sbjct: 191 CLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKKLSDDEKELIY 250
Query: 231 NYFGGKPVYLAETIKHR--DELKEWCERMLK---LRTSQILDELYALEKELFEKVVKLFF 285
+Y GGKP+ + + IK LKE + ML+ + L+++ ++E + K+
Sbjct: 251 SYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALE 310
Query: 286 AFEKQESVPYRSLSEEIL-WAVKRNILFAEPVDRVLRPQGRLELLAIKRIL 335
F+ + + + I + VK+NILF P L+PQ L AIKR+L
Sbjct: 311 IFKDSYEIEDIKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL 361
>sp|Q58049|Y632_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0632 >gi|2128418|pir||H64378
hypothetical protein MJ0632 - Methanococcus jannaschii
>gi|1591343|gb|AAB98624.1| (U67510) replication
initiator protein, putative (dnaA) [Methanococcus
jannaschii]
Length = 363
Score = 267 bits (676), Expect = 1e-70
Identities = 151/362 (41%), Positives = 229/362 (62%), Gaps = 29/362 (8%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKL--PDDHIAFYINLRRT 59
FFNRE+E+E++L ++ +EP I F++G INSGKTAL+ E I D ++ FY +LR
Sbjct: 3 FFNREKEIEEILHIIESEPQRINFIFGSINSGKTALINEIINNRLNKDKYVVFYFDLREI 62
Query: 60 PITSYSDFVDVLFSV---EFRNKVKTL-----KEAVSLVLSAGKETF-----GFPVPTEL 106
I+ Y DF++VLF F +KVK L K+ ++ S P+P
Sbjct: 63 FISKYDDFIEVLFEEYEEPFIDKVKRLFLSLIKDYPDVIKSYALLNITGVVDSIPIPKNT 122
Query: 107 LARITKEKKPKNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIH 166
L + K++ KN F YI +++ ++++ GK+PI+I+DELQ IGDLK++G LIYELFN+F+
Sbjct: 123 LNELLKKRNVKNVFRYITSVLIKIKREGKQPIIIIDELQKIGDLKLNGFLIYELFNYFVS 182
Query: 167 LTKESHLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFL------KNNG 220
LTK HL HVF ++SDSLFIERVY+EAML+GR +Y LVDDF RETAL+F+ N
Sbjct: 183 LTKHKHLCHVFCLSSDSLFIERVYNEAMLEGRCKYILVDDFDRETALKFMDFLAKENNIN 242
Query: 221 LSDDEAELVWNYFGGKP---VYLAETIKHRDELKEWCERMLKLRTSQI---LDELYALEK 274
L++++ EL++NY GGKP +Y+ +K++ +L++ MLK T ++ L+ + ++
Sbjct: 243 LTNEDKELIYNYVGGKPIDIIYVINEMKYK-KLEDILTSMLKEETQKLKYFLENVKEEDE 301
Query: 275 ELFEKVVKLFFAFEKQESVPYRSLSEEIL-WAVKRNILFAEPVDRVLRPQGRLELLAIKR 333
EL++KVV F+ + + +++ + VK+NILF P++ L+PQ L AIKR
Sbjct: 302 ELYKKVVDALKIFKDSYEIEDIKIPKKLREFLVKKNILFLNPIEGTLKPQSFLVWNAIKR 361
Query: 334 IL 335
IL
Sbjct: 362 IL 363
>sp|Q60380|Y074_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0074 >gi|2128114|pir||B64309
hypothetical protein MJ0074 - Methanococcus jannaschii
>gi|1590860|gb|AAB98056.1| (U67464) M. jannaschii
predicted coding region MJ0074 [Methanococcus
jannaschii]
Length = 358
Score = 267 bits (676), Expect = 1e-70
Identities = 154/362 (42%), Positives = 222/362 (60%), Gaps = 34/362 (9%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKL--PDDHIAFYINLRRT 59
FF+RE+E+ ++L +++ EP+ + F+YGPINSGKTAL+ E I D ++ FY +LR
Sbjct: 3 FFDREKEIAEILHILNREPDDVYFIYGPINSGKTALINEIINNRLDKDKYVVFYFDLREI 62
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNA 119
I+ Y DF++VLF E+ K ++ SL+ G P P L I K+K KN
Sbjct: 63 FISKYDDFIEVLFE-EYEGNKKPVEIIKSLIKDV-PSLCGIPAPKNTLEEILKKKTTKNV 120
Query: 120 FAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVV 179
F YI ++ +++K GK+PILI+DELQ IGD+K++G LIYELFN+F+ LTK HL HVF +
Sbjct: 121 FRYITKVLMDIKKEGKQPILIIDELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCL 180
Query: 180 TSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFL------KNNGLSDDEAELVWNYF 233
+SDSLFIERVY+EAML GRA+Y LVDDF +ETAL+F+ N L++++ EL++NY
Sbjct: 181 SSDSLFIERVYNEAMLDGRAKYLLVDDFDKETALKFMDFLAKENNISLTNEDKELIYNYV 240
Query: 234 GGKP---VYLAETIKHRDELKEWCERMLKLRTS------QILD----------ELYALEK 274
GGKP Y+ E +D LKE + +L S +ILD E+ + K
Sbjct: 241 GGKPKDIKYVVEESNFKD-LKEVLDYLLNDEISKLDMFLEILDYSKPRVEVGNEVIEINK 299
Query: 275 ELFEKVVKLFFAFEKQESVPYRSLSEEI-LWAVKRNILFAEPVDRVLRPQGRLELLAIKR 333
E ++K F+ + +P + + + ++ VK NILF P R+L+PQ L AIKR
Sbjct: 300 ---EDIIKALRLFKDKYEIPKKDIPTPVYVYLVKENILFLNPQKRILKPQSYLVWNAIKR 356
Query: 334 IL 335
+L
Sbjct: 357 LL 358
>sp|Q58697|YD01_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1301 >gi|2128773|pir||D64462
hypothetical protein MJ1301 - Methanococcus jannaschii
>gi|1592328|gb|AAB99326.1| (U67571) M. jannaschii
predicted coding region MJ1301 [Methanococcus
jannaschii]
Length = 400
Score = 260 bits (657), Expect = 2e-68
Identities = 151/393 (38%), Positives = 227/393 (57%), Gaps = 61/393 (15%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDD--HIAFYINLRRT 59
FFNRE+E+ K+L ++ EPNLI F+YG INSGKTAL+ E I D +I FY +LR
Sbjct: 10 FFNREKEIHKILSIIEGEPNLIYFIYGSINSGKTALINEIINNRLDKNKYIVFYFDLREI 69
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNA 119
I+ Y DF++VLF E+ K+ E + +++ +G P+P L I K+K KN
Sbjct: 70 FISKYDDFIEVLFE-EYEGD-KSPIEVIKAIINDLPSLYGIPIPKNTLNEIFKKKTTKNV 127
Query: 120 FAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVV 179
F YI ++ ++++ GK+PI+I+DELQ IGD+K++G LIYELFN+F+ LTK HL HVF +
Sbjct: 128 FRYITNVLMDIKREGKQPIIIIDELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCL 187
Query: 180 TSDSLFIERVYSEAMLQG------------------------------------------ 197
+SDSLFIERVY+EAML+
Sbjct: 188 SSDSLFIERVYNEAMLEDRVDYILVDDHRGGYAPSIGILPQIESGVAFGNPALEYSNRGF 247
Query: 198 ---RAEYFLVDDFKRETALRFL------KNNGLSDDEAELVWNYFGGKPVYLAETIK--H 246
R EY LVDDF +ETAL+F+ N L++++ EL++NY GGKPV + + I
Sbjct: 248 ASMRGEYILVDDFDKETALKFMDFLAKENNMSLTNEDKELIYNYVGGKPVLIIKVIDKLR 307
Query: 247 RDELKEWCERMLKLRTSQI---LDELYALEKELFEKVVKLFFAFEKQESVPYRSLSEEIL 303
+ L + + MLK T ++ L+++ ++EL++KVV F++ + + ++I
Sbjct: 308 YENLNDILDFMLKDATQKLKYFLEDVKEEDEELYKKVVDALKLFKEDYEIEDIKIPKKIR 367
Query: 304 -WAVKRNILFAEPVDRVLRPQGRLELLAIKRIL 335
+ +KRNILF P++ +L+PQ L AIK++L
Sbjct: 368 EFLIKRNILFLNPIEGILKPQSFLVWNAIKKVL 400
>sp|Q58416|YA10_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1010 >gi|2128629|pir||A64426
hypothetical protein MJ1010 - Methanococcus jannaschii
>gi|1591669|gb|AAB99015.1| (U67543) M. jannaschii
predicted coding region MJ1010 [Methanococcus
jannaschii]
Length = 377
Score = 252 bits (637), Expect = 4e-66
Identities = 151/375 (40%), Positives = 222/375 (58%), Gaps = 44/375 (11%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDD--HIAFYINLRRT 59
FFNR E++++L ++ EPNLI F+YGPINSGKTAL+ E I D ++ FYI+LR
Sbjct: 6 FFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYIDLREI 65
Query: 60 PITSYSDF---------------VDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPT 104
I+ Y +F ++VLF E+ + K ++ SL+ A G P P
Sbjct: 66 FISKYDEFEAKLRATKTFGFRLIIEVLFE-EYEDDKKPIEIIRSLIKDA-PSLCGIPTPK 123
Query: 105 ELLARITKEKKPKNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFF 164
L I K+K KN F YI ++ ++++ GK+PI+I+DELQ IGD+K++G LIYELFN+F
Sbjct: 124 NTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIIIDELQKIGDMKINGFLIYELFNYF 183
Query: 165 IHLTKESHLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLK------- 217
+ LTK HL HVF ++SDSLFIERVY+EAML+ R +Y LVDDF +ETAL+F+
Sbjct: 184 VSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSEEIL 243
Query: 218 NNGLSDDEAELVWNYFGGKPVYLAETI---KHRDELKEWCERMLKLRTSQILDELYAL-- 272
N LSD++ EL+++Y GGKP+ + I KH++ LK+ +L S++ D L L
Sbjct: 244 NKKLSDEDKELIYSYVGGKPILIINVIGKLKHKN-LKDVLNILLMDEISKLKDFLSNLDY 302
Query: 273 -------EKELF----EKVVKLFFAFEKQESVPYRSLSEEI-LWAVKRNILFAEPVDRVL 320
E+E+ E ++ F+ + + + + + ++ VK+NILF P L
Sbjct: 303 IKPKVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTL 362
Query: 321 RPQGRLELLAIKRIL 335
+PQ L AIKR+L
Sbjct: 363 KPQSFLVWNAIKRVL 377
>sp|Q57611|Y147_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0147 >gi|2128154|pir||D64318
hypothetical protein MJ0147 - Methanococcus jannaschii
>gi|1590908|gb|AAB98139.1| (U67472) M. jannaschii
predicted coding region MJ0147 [Methanococcus
jannaschii]
Length = 371
Score = 251 bits (634), Expect = 9e-66
Identities = 146/367 (39%), Positives = 224/367 (60%), Gaps = 36/367 (9%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIK-KLPDDHIAFYINLRRTP 60
FFNRE+E+ ++L ++ EPN+I F+YGP+NSGKTAL+ I+ KL DD+ FYIN R
Sbjct: 7 FFNREKEIHEILSILEGEPNIIYFIYGPLNSGKTALIKHIIENKLSDDYKVFYINFRTYL 66
Query: 61 ITSYSDFVDVLFSV---EFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPK 117
I+ +F++ +F+ +F K+K E ++L+ K G P+P ++ +EK
Sbjct: 67 ISEKREFIEAIFTTKKDDFFEKIKDKSEVLNLITKGAKILTGIPIPEVEFDKLFEEKI-N 125
Query: 118 NAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGS--LIYELFNFFIHLTKESHLSH 175
+AF Y+ +++ EV+K+GK+P+LILDELQ+I D+ ++ L+ ELF F + LTKE HL H
Sbjct: 126 DAFQYLNSILLEVKKSGKQPVLILDELQMIKDVVLNWQKYLLKELFQFLVSLTKEQHLCH 185
Query: 176 VFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLK-------NNGLSDDEAEL 228
VF ++SDSLFIE VYS L+GRA+Y LVDDF +ETAL+F+ N LSD++ EL
Sbjct: 186 VFCLSSDSLFIEYVYSAGELEGRAKYLLVDDFDKETALKFMDFLAKEILNKKLSDEDKEL 245
Query: 229 VWNYFGGKPVYLAETIKHR--DELKEWCERMLKLRTS----------------QILDELY 270
++NY GGKPVY+ I +L++ MLK T ++ DE+
Sbjct: 246 IYNYVGGKPVYIYSVIDEMRYRKLEDILNLMLKEETQKLKYFLKELDYIKPKVELKDEII 305
Query: 271 ALEKELFEKVVKLFFAFEKQESVPYRSLSEEI-LWAVKRNILFAEPVDRVLRPQGRLELL 329
++K+ +KL F++ V + E + ++ VK+NILF P++ +L+PQ L
Sbjct: 306 EIKKDDIINALKL---FKENYEVSDDDIPEPVYIYLVKKNILFLNPIEGILKPQSFLIWN 362
Query: 330 AIKRILD 336
AIK++L+
Sbjct: 363 AIKKLLN 369
>sp|Q60388|Y075_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0075 >gi|2128115|pir||C64309
hypothetical protein MJ0075 - Methanococcus jannaschii
>gi|1590862|gb|AAB98065.1| (U67465) M. jannaschii
predicted coding region MJ0075 [Methanococcus
jannaschii]
Length = 365
Score = 247 bits (625), Expect = 1e-64
Identities = 144/359 (40%), Positives = 219/359 (60%), Gaps = 24/359 (6%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDD--HIAFYINLRRT 59
FF+RERE+ ++L ++ P+ I F+YGPINSGKT LMME I +L DD + FY NLR
Sbjct: 5 FFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYNLRGV 64
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGK------ETFGFPV--PTELLARIT 111
I+SYSDF D++F + NK K + + +++ K + F + P++L I
Sbjct: 65 RISSYSDFFDIMFEIREDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLAKVIL 124
Query: 112 KEKKPKNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKES 171
++K + F Y+ + E+ K G +P++I+DELQ + LK +G LI +LFNFF+ LTKE
Sbjct: 125 SKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRLKGLKSNGELIDDLFNFFVRLTKEL 184
Query: 172 HLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLK-------NNGLSDD 224
H++H F ++SDSLFIE VY A L+GRA+Y LVDDF +ETAL+F+ LS+D
Sbjct: 185 HITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRKLSED 244
Query: 225 EAELVWNYFGGKPVYLAETI---KHRDELKEWCERMLKLRTSQI---LDELYALEKELFE 278
E EL+++Y GGKP + + I K ELK+ E MLK ++ L+++ ++EL+
Sbjct: 245 EKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDEELYN 304
Query: 279 KVVKLFFAFEKQESVPYRSLSEEIL-WAVKRNILFAEPVDRVLRPQGRLELLAIKRILD 336
K+V F++ + + + I + VK+NILF P++ L+PQ L AIK++L+
Sbjct: 305 KIVDALKIFKENYEIEDIKIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKKLLN 363
>sp|Q58211|Y801_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0801 >gi|2128513|pir||A64400
hypothetical protein MJ0801 - Methanococcus jannaschii
>gi|1499623|gb|AAB98799.1| (U67524) M. jannaschii
predicted coding region MJ0801 [Methanococcus
jannaschii]
Length = 379
Score = 231 bits (583), Expect = 9e-60
Identities = 147/379 (38%), Positives = 223/379 (58%), Gaps = 47/379 (12%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIK-KLPDDHIAFYINLRRTP 60
FF+RERE+ ++L +++ EP+ I F+YGP+NSGKTAL+ I+ KL DD+ FYIN R
Sbjct: 3 FFDREREINEILHILNREPDDIYFIYGPLNSGKTALIKHIIENKLSDDYKVFYINFRTYL 62
Query: 61 ITSYSDFVDVLFSV---EFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPK 117
I+ +F++ +F+ +F K+K E ++L+ + G P+P ++ +EK
Sbjct: 63 ISEKREFIEAIFTTKKDDFFEKIKDKDEVLNLITKGVRILTGIPIPEVEFDKLFEEKI-N 121
Query: 118 NAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGS------------------LIYE 159
+AF Y+ +L+ EV+K+GK+PILI DELQ+I D+ ++ L+ E
Sbjct: 122 DAFQYLNSLLLEVKKSGKKPILIFDELQMIKDVVLNTENQRFSAFPSLRFGNGQKYLLKE 181
Query: 160 LFNFFIHLTKESHLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFL--- 216
LF F + LTKE HL HVF ++SDSLFIE VYS L+GRA+Y LVDDF +ETAL+F+
Sbjct: 182 LFQFLVSLTKEQHLCHVFCLSSDSLFIEYVYSTGELEGRAKYLLVDDFDKETALKFMDFL 241
Query: 217 ---KNNGLSDDEAELVWNYFGGKP---VYLAETIKHRDELKEWCERMLK---LRTSQILD 267
N L++++ EL+++Y GGKP Y+ E K +D L+E E MLK + LD
Sbjct: 242 AVENNINLTNEDKELIYSYVGGKPKDIKYVVEESKFKD-LREILEFMLKDAVQKLDMFLD 300
Query: 268 EL-YALEK-----ELFE----KVVKLFFAFEKQESVPYRSLSEEI-LWAVKRNILFAEPV 316
L Y+ K E+ E V++ F+ + V + + + + +KRNILF P+
Sbjct: 301 MLNYSKPKVDVGDEVIEIKKDNVIEALKLFKDEYEVSKKHIPVPVYTYLIKRNILFLNPI 360
Query: 317 DRVLRPQGRLELLAIKRIL 335
+ +L+PQ L AIKR+L
Sbjct: 361 EGILKPQSYLVWNAIKRLL 379
>sp|Q59004|YG09_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1609 >gi|2128966|pir||H64500
hypothetical protein MJ1609 - Methanococcus jannaschii
>gi|1500507|gb|AAB99636.1| (U67601) M. jannaschii
predicted coding region MJ1609 [Methanococcus
jannaschii]
Length = 374
Score = 215 bits (543), Expect = 4e-55
Identities = 137/375 (36%), Positives = 215/375 (56%), Gaps = 44/375 (11%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPD--DHIAFYINLRRT 59
FFNRE+E+ K+L ++ EPN I F+YG +NSGK+ LM E + D +I F+I+ R
Sbjct: 3 FFNREKEINKILSIIEGEPNNIYFIYGSLNSGKSTLMREIVVNRLDISKYIPFFIDFRTR 62
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKE---AVSLVLSAGKETF-----GFPV--PTELLAR 109
I + +F++ LF V+ ++++ +E +++ +L G E G P+ P +
Sbjct: 63 NILNVDNFIECLFEVDEKSEIDDFREYAKSLADLLVKGSEEISKYYLGMPIKIPKPFFDK 122
Query: 110 I-TKEKKPKNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGS--LIYELFNFFIH 166
I K+ K + + YI L ++ + GK+PILI DELQ+I ++ ++G+ L++ LF F +
Sbjct: 123 IFNKKDKSADVYQYIEYLFAKLNEKGKKPILIFDELQMIKEITLNGNRKLLWSLFQFLVA 182
Query: 167 LTKESHLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLK-------NN 219
LTK HL HVF ++SDSLFIE VY L+GRA+Y LVDDF ++TAL+F+ N
Sbjct: 183 LTKVQHLCHVFCLSSDSLFIEYVYKTGELEGRADYILVDDFDKQTALKFIDFLAKEILNK 242
Query: 220 GLSDDEAELVWNYFGGKPVYLAETIK--HRDELKEWCERMLKLRTS-------------- 263
L DE EL+++Y GGKPV + + I + L + + MLK T
Sbjct: 243 KLPKDEKELIYSYVGGKPVLIIKVIDKLRYENLNDILDFMLKDATQKLKYFLNDLDYIKP 302
Query: 264 --QILDELYALEKELFEKVVKLF-FAFEKQESVPYRSLSEEILWAVKRNILFAEPVDRVL 320
++ DE+ L+KE K +KLF ++E +S + + ++ VK+NILF P++ +L
Sbjct: 303 KVEVGDEVIELKKEDIVKALKLFKDSYEISDSEVAKPI---YVYLVKKNILFLNPIEGIL 359
Query: 321 RPQGRLELLAIKRIL 335
+PQ L AIKR+L
Sbjct: 360 KPQSFLIWNAIKRLL 374
>gi|10954506 M. jannaschii predicted coding region MJECL15 [Methanococcus
jannaschii] >gi|2496257|sp|Q60277|YZ15_METJA
HYPOTHETICAL ATP-BINDING PROTEIN MJECL15
>gi|2129032|pir||G64511 hypothetical protein MJECL15 -
Methanococcus jannaschii plasmid pURB800
>gi|1522655|gb|AAC37088.1| (L77118) M. jannaschii
predicted coding region MJECL15 [Methanococcus
jannaschii]
Length = 365
Score = 210 bits (530), Expect = 1e-53
Identities = 130/363 (35%), Positives = 213/363 (57%), Gaps = 29/363 (7%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDD--HIAFYINLRRT 59
FFNRE+E+ ++L ++ EPN I F+YGP+NSGK+ L+ E I D +I F+I+ R
Sbjct: 3 FFNREKEINEILLILEEEPNNIYFIYGPLNSGKSTLIREVITNRLDKSKYIPFFIDFRTR 62
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKE---AVSLVLSAGKETF-----GFP--VPTELLAR 109
I + +F++ LF V+ ++K+ +E +++ +L G E G P VP R
Sbjct: 63 NILNVDNFIECLFEVDEKSKIDDFREYAKSLADLLVKGSEEISKYYLGMPIKVPKPFFDR 122
Query: 110 I-TKEKKPKNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGS--LIYELFNFFIH 166
I +K K + + YI L ++ + GK+PILI DELQ+I ++ ++G+ L++ LF F +
Sbjct: 123 IFSKRDKSADVYQYIEYLFAKLNEKGKKPILIFDELQMIREITLNGNRLLLWSLFQFLVA 182
Query: 167 LTKESHLSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFL------KNNG 220
LTK HL HVF ++SDSLFIE +Y +A L+G +Y LVDDF ++TAL+F+ KN
Sbjct: 183 LTKVQHLCHVFCLSSDSLFIEYIYGKAELKGGVDYILVDDFDKKTALKFMDFLAKQKNIN 242
Query: 221 LSDDEAELVWNYFGGKPVYLAETI---KHRDELKEWCERMLKLRTSQILDELYALEKEL- 276
L++++ EL+++Y GGK Y+ + I K +LK E L+ + + + L +E++
Sbjct: 243 LTNEDKELIYSYVGGKAKYIYDVIVKLKAVKDLKYILETKLEEERNHLEELLEKVEEDYE 302
Query: 277 ---FEKVVKLFFAFEKQESVPYRSLSEEI-LWAVKRNILFAEPVDRVLRPQGRLELLAIK 332
+++V++ F+ +P + +I ++ +K NILF P L+PQ L AIK
Sbjct: 303 GINYDEVLEALKLFKDNYELPKSKIKRKIRIFLIKENILFLNPQKGTLKPQSYLVWNAIK 362
Query: 333 RIL 335
R+L
Sbjct: 363 RML 365
>gi|10954505 M. jannaschii predicted coding region MJECL14 [Methanococcus
jannaschii] >gi|2496256|sp|Q60276|YZ14_METJA
HYPOTHETICAL PROTEIN MJECL14 >gi|2129031|pir||F64511
hypothetical protein MJECL14 - Methanococcus jannaschii
plasmid pURB800 >gi|1522654|gb|AAC37087.1| (L77118) M.
jannaschii predicted coding region MJECL14
[Methanococcus jannaschii]
Length = 314
Score = 166 bits (417), Expect = 3e-40
Identities = 107/299 (35%), Positives = 167/299 (55%), Gaps = 23/299 (7%)
Query: 62 TSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKET----FGFPVPTELLARITKEKKPK 117
TS +FV+ LF ++ +K K +K + + +G +P +L + EK+
Sbjct: 14 TSMDNFVEALFEIDENSKEKKIKSYIESFTKGVNDIINLYYGIKIPEPILDKFFGEKEKG 73
Query: 118 N-AFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGS--LIYELFNFFIHLTKESHLS 174
F +I L + K G +P+ ILDELQ+I D+ ++G L+ LF F + LTKE H++
Sbjct: 74 GLVFKFIRDLFMSLNKKGVQPVFILDELQMIKDIVMNGGKPLLKSLFQFLVSLTKERHIA 133
Query: 175 HVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLK------NNGLSDDEAEL 228
HVF ++SDSLFIE VY+ L+GRA+Y LVDDF +ET+L+F+ N L++++ EL
Sbjct: 134 HVFCLSSDSLFIEYVYNAGELEGRAKYLLVDDFDKETSLKFMDFLAVEGNINLTNEDKEL 193
Query: 229 VWNYFGGKP---VYLAETIKHRDELKEWCERMLKLRTSQILDELYALEKEL-----FEKV 280
+++Y GGK Y+ E K +D L+E + MLK S++ L ++ + +E V
Sbjct: 194 IYSYVGGKAKDIKYVIEESKFKD-LREVLDFMLKDEVSKLRKLLVKIKTKKIAEVEYENV 252
Query: 281 VKLFFAFEKQESVPYRSLSEEIL-WAVKRNILFAEPVDRVLRPQGRLELLAIKRILDII 338
VK F+ + + E + +KRNILF PV+ +L+PQ L AIKR+L I
Sbjct: 253 VKALKLFKDNYEINEYLMDENTKEFLIKRNILFLNPVEEILKPQSYLVWNAIKRVLQNI 311
>sp|Q58412|YA06_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1006 >gi|2128628|pir||E64425
hypothetical protein MJ1006 - Methanococcus jannaschii
>gi|1591665|gb|AAB99014.1| (U67543) M. jannaschii
predicted coding region MJ1006 [Methanococcus
jannaschii]
Length = 359
Score = 165 bits (413), Expect = 8e-40
Identities = 109/353 (30%), Positives = 186/353 (51%), Gaps = 31/353 (8%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLP--DDHIAFYINLRRT 59
F+NRE+EL L V EPN I FVYGP +SGK+ +M+ I++L DD + FY +LR
Sbjct: 20 FYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKKDDLVFFYYDLREY 79
Query: 60 PITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAG-KETFGFPVPTELLARITKEKKPKN 118
+ +F+++ F + + E + G +E F F K +
Sbjct: 80 ATPTKEEFLEIFFEKGDKKYLLNRFEINLKIFKFGIEEKFDFD-----------NIKLND 128
Query: 119 AFAYIVTLMEEVRKAGKRPILILDELQVI------GDLKVDGSLIYELFNFFIHLTKESH 172
F+ + + V K GK+PILI+DELQ + G+ K D SL+ ELFN F+HLTK H
Sbjct: 129 VFSKMKESINAVIKDGKKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLFVHLTKVRH 188
Query: 173 LSHVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNY 232
L HV +TSD+LFIE +Y + L+ +EY+L+D ++E+ LK G S++E + Y
Sbjct: 189 LCHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEEEVDYCLKY 248
Query: 233 FGGKPVYLAETIKHRD---ELKEWCERMLKLRTSQILDELYALEKEL-FEKVVKLFFAFE 288
P +++ I ++ +++ ++ + + +IL L + +KE K++ FE
Sbjct: 249 L-SLPYEISQLINNKKLGLSVEQTIKQWINIERDKIL-YLISTQKEFEMGKLIDALKLFE 306
Query: 289 KQESVPYR-----SLSEEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILD 336
+ V + +L +E+ + +K ILF + ++ +++P + AIK +++
Sbjct: 307 NKIKVDIKEIIRDNLMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE 359
>sp|Q58476|YA76_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1076 >gi|2128655|pir||C64434
hypothetical protein MJ1076 - Methanococcus jannaschii
>gi|1591724|gb|AAB99081.1| (U67550) M. jannaschii
predicted coding region MJ1076 [Methanococcus
jannaschii]
Length = 337
Score = 161 bits (402), Expect = 2e-38
Identities = 109/352 (30%), Positives = 178/352 (49%), Gaps = 35/352 (9%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAF-YINLRRTP 60
F+NRE+EL L V EPN I FVYGP +SGK+ +MM IK+L + +I F Y NLR+
Sbjct: 3 FYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMMRVIKELENSNIVFFYYNLRKYA 62
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAG-KETFGFPVPTELLARITKEKKPKNA 119
+ +F+ + F + + E + G +E F F K +
Sbjct: 63 TPTKDEFLSIFFEKSDKKYLLNKLEINLKIFKFGIEENFDF-----------NNIKLNDV 111
Query: 120 FAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDG--SLIYELFNFFIHLTKESHLSHVF 177
FA I + V K GKRP+L++DELQ + ++ + SL+ ELFN F+ LTK HL HV
Sbjct: 112 FAKINESINTVIKDGKRPVLVIDELQKLKNIYFNSGKSLLNELFNLFVSLTKMEHLCHVI 171
Query: 178 VVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKP 237
+TSD+LFI+ VY + L +EY+L+D K++ + LK G + E + NY P
Sbjct: 172 CLTSDTLFIDNVYRNSSLSEASEYYLIDWLKKDDIKKILKEEGFNKKEIDYCLNYL-SLP 230
Query: 238 VYLAETIKHRD---ELKEWCERMLKLRTSQIL----------DELYALEKELFEKVVKLF 284
+++ I ++ ++E +R + + I +E+Y + + +K+ +
Sbjct: 231 YEISQLINNKKLGLSVEETIKRWINIEADGIKYLIDTSDLNEEEIYKVLSKFKDKIKINY 290
Query: 285 FAFEKQESVPYRSLSEEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILD 336
K+E + Y I + ++ ILF + ++ +++P + AIK ILD
Sbjct: 291 KKDVKKEEMKY------IKFLIENEILFYDVINGIIKPTSVKKWYAIKEILD 336
>sp|Q58042|Y625_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0625 >gi|2128413|pir||A64378
hypothetical protein MJ0625 - Methanococcus jannaschii
>gi|1591336|gb|AAB98625.1| (U67510) M. jannaschii
predicted coding region MJ0625 [Methanococcus
jannaschii]
Length = 336
Score = 157 bits (393), Expect = 2e-37
Identities = 112/355 (31%), Positives = 183/355 (51%), Gaps = 43/355 (12%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAF-YINLRRTP 60
F+NRE+EL L +PN I FVYGP +SGK+ +M IK+L D +I F Y NLR+
Sbjct: 3 FYNREKELNYLKTYCQLDPNSILFVYGPKSSGKSTVMRRVIKELEDSNIVFFYYNLRKYA 62
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGK----ETFGFPVPTELLARITKEKKP 116
S +F+ V F +++ K L + L L K E F F K
Sbjct: 63 TYSKEEFLRVFFE---KSEKKYLLNKLELNLGVFKFGVEENFDF-----------NNLKL 108
Query: 117 KNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDG--SLIYELFNFFIHLTKESHLS 174
+ FA I + V + GK+P+LI+DELQ + ++ +G SL+ ELFN F+ LTK HL
Sbjct: 109 NDVFAKINESINAVVEDGKKPVLIIDELQKLKNIYFNGGKSLLNELFNLFVSLTKMEHLC 168
Query: 175 HVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFG 234
HV +TSD+LFIE +Y + L+ ++Y+L+D ++ T LK G S++E +Y
Sbjct: 169 HVICLTSDTLFIEEIYQSSTLENTSKYYLIDWLRKGTIRNILKEEGFSEEEINYCLDYL- 227
Query: 235 GKPVYLAETIKHR-------DELKEWCERMLKLRTSQILDELYALEKEL------FEKVV 281
P + + I+++ + +++W + K + ++D E+EL F+ +
Sbjct: 228 SLPYEIVDLIENKKLGLSVEETIRQWI-NIEKDKIKYLIDTTDLDEEELYKVLSKFKDKI 286
Query: 282 KLFFAFE-KQESVPYRSLSEEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRIL 335
K+ + E K+E + Y + +K ILF + ++ +++P + AI+ IL
Sbjct: 287 KISYEKEVKKEEMKY------FKFLIKNEILFYDVINGIIKPTSVKKWYAIREIL 335
>gi|10954515 M. jannaschii predicted coding region MJECL26 [Methanococcus
jannaschii] >gi|2496258|sp|Q60285|YZ26_METJA
HYPOTHETICAL ATP-BINDING PROTEIN MJECL26
>gi|2129041|pir||A64513 hypothetical protein MJECL26 -
Methanococcus jannaschii plasmid pURB800
>gi|1522663|gb|AAC37097.1| (L77118) M. jannaschii
predicted coding region MJECL26 [Methanococcus
jannaschii]
Length = 343
Score = 152 bits (379), Expect = 7e-36
Identities = 109/358 (30%), Positives = 183/358 (50%), Gaps = 41/358 (11%)
Query: 2 FFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAF-YINLRRTP 60
F++RE+EL L EPN I FVYGP +SGK+ +M IK+L + +I F Y NLR+
Sbjct: 7 FYDREKELNYLKTYCQLEPNSILFVYGPKSSGKSTVMRRVIKELENSNIVFFYYNLRKYA 66
Query: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGK----ETFGFPVPTELLARITKEKKP 116
+ +F+ V F ++ K L + L L K E F F
Sbjct: 67 TPTRDEFLRVFFE---KSDKKYLLNKLELNLGVCKFGIEENFDF-----------NNLCL 112
Query: 117 KNAFAYIVTLMEEVRKAGKRPILILDELQVIGDLKVDG--SLIYELFNFFIHLTKESHLS 174
+ FA I + V + GK+P+LI+DELQ + ++ +G SL+ ELFN F+ LTK HL
Sbjct: 113 NDVFAKINESINAVVEEGKKPVLIIDELQKLKNIYFNGGKSLLNELFNLFVSLTKMEHLC 172
Query: 175 HVFVVTSDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFG 234
HV +TSD+LFI+ +Y + L+ +EY+L+D ++ T LK G S++E +Y
Sbjct: 173 HVICLTSDTLFIDEIYRNSTLKNASEYYLIDWLRKGTIRNILKEEGFSEEEINYALDYL- 231
Query: 235 GKPVYLAETIKHR-------DELKEWC----ERMLKLRTSQILDE--LYALEKELFEKVV 281
P +++ I ++ +K+W + + L + LDE LY + + +K+
Sbjct: 232 SLPYEISQLINNKKLGLSVEQTIKQWINVEKDGLKYLIDTTDLDEEGLYNVLSKFKDKIK 291
Query: 282 KLFFAFEKQESVPYRSLSEEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDIIE 339
+ K+E + Y + + ++ ILF + ++ +++P +E AIK I++ ++
Sbjct: 292 ISYDKEVKKEEMKY------LKFLIENEILFYDVINGIIKPTSIIEWHAIKEIINAMQ 343
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.141 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118609728
Number of Sequences: 2977
Number of extensions: 4864825
Number of successful extensions: 15587
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15490
Number of HSP's gapped (non-prelim): 21
length of query: 339
length of database: 189,106,746
effective HSP length: 56
effective length of query: 283
effective length of database: 155,591,474
effective search space: 44032387142
effective search space used: 44032387142
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)