BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0647 (aor-2) DE:tungsten-containing aldehyde ferredoxin
oxidoreductase
         (607 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||B75071 tungsten-containing aldehyde ferredoxin oxidoreducta...  1261  0.0
sp|O58778|AOR_PYRHO TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXID...  1238  0.0
sp|Q51739|AOR_PYRFU TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXID...  1033  0.0
emb|CAC11939.1| (AL445065) probable aldehyde ferredoxin oxidored...   605  e-172
gi|11499862 aldehyde ferredoxin oxidoreductase (aor-4) [Archaeog...   577  e-163
pir||G75154 tungsten-containing aldehyde ferredoxin oxidoreducta...   411  e-114
gi|11497644 aldehyde ferredoxin oxidoreductase (aor-1) [Archaeog...   384  e-105
pir||G71072 probable formaldehyde:ferredoxin oxidoreductase - Py...   372  e-102
pdb|1B25|A Chain A, Formaldehyde Ferredoxin Oxidoreductase From ...   370  e-101
pir||A75101 formaldehyde:ferredoxin oxidoreductase PAB0798 - Pyr...   369  e-101
sp|Q56303|FOR_THELI FORMALDEHYDE:FERREDOXIN OXIDOREDUCTASE >gi|1...   362  5e-99
gb|AAD02878.1| (AF101432) formaldehyde ferredoxin oxidoreductase...   355  9e-97
gi|11497952 aldehyde ferredoxin oxidoreductase (aor-3) [Archaeog...   351  1e-95
pir||A71221 probable aldehyde:ferredoxin oxidoreductase - Pyroco...   331  1e-89
pir||E75188 aldehyde ferredoxin oxidoreductase (aor-3) PAB2330 -...   328  1e-88
emb|CAC11963.1| (AL445065) tungsten-containing aldehyde ferredox...   313  3e-84
emb|CAC12268.1| (AL445066) tungstealdehyde ferredoxaldehyde ferr...   286  4e-76
gb|AAD02879.1| (AF101433) formaldehyde ferredoxin oxidoreductase...   271  2e-71
pir||C72785 probable aldehyde ferredoxin oxidoreductase APE0266 ...   265  1e-69
pir||D71078 probable aldehyde:ferredoxin oxidoreductase - Pyroco...   254  3e-66
pir||C71078 probable aldehyde:ferredoxin oxidoreductase - Pyroco...   250  2e-65
gi|11497697 aldehyde ferredoxin oxidoreductase (aor-2) [Archaeog...   237  2e-61
gb|AAB47949.1| (U68703) hypothetical protein [Escherichia coli]       187  2e-46
sp|P76192|YDHV_ECOLI HYPOTHETICAL 77.9 KD PROTEIN IN RIBE-PYKF I...   187  2e-46
pir||F75005 glyceraldehyde-3-phosphate: ferredoxin oxidoreductas...   104  4e-21
gb|AAC70892.1| (U74298) glyceraldehyde-3-phosphate: ferredoxin o...    96  1e-18
pir||B71157 hypothetical protein PH0457 - Pyrococcus horikoshii ...    92  2e-17

>pir||B75071 tungsten-containing aldehyde ferredoxin oxidoreductase PAB0647 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458383|emb|CAB49871.1| (AJ248286)
           tungsten-containing aldehyde ferredoxin oxidoreductase
           [Pyrococcus abyssi]
           Length = 607
           
 Score = 1261 bits (3228), Expect = 0.0
 Identities = 607/607 (100%), Positives = 607/607 (100%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI
Sbjct: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV
Sbjct: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG
Sbjct: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
           HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK
Sbjct: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNY 300
           YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNY
Sbjct: 241 YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNY 300

Query: 301 LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER 360
           LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER
Sbjct: 301 LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER 360

Query: 361 GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMG 420
           GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMG
Sbjct: 361 GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMG 420

Query: 421 VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV 480
           VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV
Sbjct: 421 VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV 480

Query: 481 ILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERIWNAERLFN 540
           ILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERIWNAERLFN
Sbjct: 481 ILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERIWNAERLFN 540

Query: 541 LKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE 600
           LKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE
Sbjct: 541 LKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE 600

Query: 601 LGLEEFI 607
           LGLEEFI
Sbjct: 601 LGLEEFI 607


>sp|O58778|AOR_PYRHO TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE
           >gi|7450434|pir||F71094 probable aldehyde:ferredoxin
           oxidoreductase - Pyrococcus horikoshii
           >gi|3257433|dbj|BAA30116.1| (AP000004) 607aa long
           hypothetical aldehyde:ferredoxin oxidoreductase
           [Pyrococcus horikoshii]
           Length = 607
           
 Score = 1238 bits (3167), Expect = 0.0
 Identities = 589/607 (97%), Positives = 603/607 (99%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           MFGYWGKILRVNL+DGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPK+DPFSPENKLI
Sbjct: 1   MFGYWGKILRVNLSDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKIDPFSPENKLI 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAII+EGKADHPV
Sbjct: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIVEGKADHPV 120

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+YI+DENVEIRDASKVWGKLVSETE+ LKEEVGDKHVQIASIGPAGENKVRFAAVMNNG
Sbjct: 121 YIYINDENVEIRDASKVWGKLVSETERMLKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
           HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKL+KDPVAGGGLPK
Sbjct: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLRKDPVAGGGLPK 240

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNY 300
           YGTAVLVNIINEHGLYPTRNFQTGVF+YAYEQSGEAMAAKYL+RNKPCFACPIGCGRVNY
Sbjct: 241 YGTAVLVNIINEHGLYPTRNFQTGVFKYAYEQSGEAMAAKYLVRNKPCFACPIGCGRVNY 300

Query: 301 LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER 360
           LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER
Sbjct: 301 LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER 360

Query: 361 GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMG 420
           GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAE+FNG EYFMG
Sbjct: 361 GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAEKFNGLEYFMG 420

Query: 421 VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV 480
           VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV
Sbjct: 421 VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV 480

Query: 481 ILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERIWNAERLFN 540
           ILFQDLTA+IDAAGLC+FTTFGLGADDY DMLNAALGWDFST+DYLKIGERIWNAERLFN
Sbjct: 481 ILFQDLTAVIDAAGLCIFTTFGLGADDYTDMLNAALGWDFSTDDYLKIGERIWNAERLFN 540

Query: 541 LKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE 600
           LKAGLDPLKEDTLPKR LEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE
Sbjct: 541 LKAGLDPLKEDTLPKRFLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE 600

Query: 601 LGLEEFI 607
           LGLEEF+
Sbjct: 601 LGLEEFM 607


>sp|Q51739|AOR_PYRFU TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE
           >gi|1065375|pdb|1AOR|A Chain A, Aldehyde Ferredoxin
           Oxidoreductase Protein Complexed With Molybdopterin
           (Synchrotron X-Ray Diffraction) >gi|1065376|pdb|1AOR|B
           Chain B, Aldehyde Ferredoxin Oxidoreductase Protein
           Complexed With Molybdopterin (Synchrotron X-Ray
           Diffraction) >gi|736274|emb|CAA56170.1| (X79777)
           aldehyde:ferredoxin oxidoreductase [Pyrococcus furiosus]
           Length = 605
           
 Score = 1033 bits (2641), Expect = 0.0
 Identities = 486/606 (80%), Positives = 543/606 (89%), Gaps = 2/606 (0%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M+G WG+ +RVNL+ G IK E ++EE AKKWLG+RG  IY LLKEMDP VDP SPENKLI
Sbjct: 1   MYGNWGRFIRVNLSTGDIKVEEYDEELAKKWLGSRGLAIYLLLKEMDPTVDPLSPENKLI 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
            A GPLTGTSAPTGGRY V+TKSPLTG+I MANSGGYFGAELKFAG+DAI++EGKA+ PV
Sbjct: 61  IAAGPLTGTSAPTGGRYNVVTKSPLTGFITMANSGGYFGAELKFAGYDAIVVEGKAEKPV 120

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+YI DE++EIRDAS +WGK VSETE  +++EVG + V+IASIGPAGEN V+FAA+MN+G
Sbjct: 121 YIYIKDEHIEIRDASHIWGKKVSETEATIRKEVGSEKVKIASIGPAGENLVKFAAIMNDG 180

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
           HRAAGRGGVGAVMGSKNLKAI V G K V +ADK KFM V+REK+ KL+ DPVAGGGLPK
Sbjct: 181 HRAAGRGGVGAVMGSKNLKAIAVEGSKTVPIADKQKFMLVVREKVNKLRNDPVAGGGLPK 240

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNY 300
           YGTAVLVNIINE+GLYP +NFQTGV+ YAYEQSGEAMAAKYL+RNKPC+ACPIGCGRVN 
Sbjct: 241 YGTAVLVNIINENGLYPVKNFQTGVYPYAYEQSGEAMAAKYLVRNKPCYACPIGCGRVNR 300

Query: 301 LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYER 360
           LP++GETEGPEYES WALGANLGINDLASIIEANH  DE G+DTIS GGTLATAMELYE+
Sbjct: 301 LPTVGETEGPEYESVWALGANLGINDLASIIEANHMCDELGLDTISTGGTLATAMELYEK 360

Query: 361 GLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMG 420
           G IK E++G  + PPFR+GNTEVLHY+I KIAKREGFGD LAEG YRLAE +   E  M 
Sbjct: 361 GHIKDEELG--DAPPFRWGNTEVLHYYIEKIAKREGFGDKLAEGSYRLAESYGHPELSMT 418

Query: 421 VKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMV 480
           VKK ELPAYDPRGAEGHGLGYATNNRGGCHIK YMISPEILGYPYKMDPHD+SD+K+KM+
Sbjct: 419 VKKLELPAYDPRGAEGHGLGYATNNRGGCHIKNYMISPEILGYPYKMDPHDVSDDKIKML 478

Query: 481 ILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERIWNAERLFN 540
           ILFQDLTALID+AGLCLFTTFGLGADDYRD+LNAALGWDF+TEDYLKIGERIWNAERLFN
Sbjct: 479 ILFQDLTALIDSAGLCLFTTFGLGADDYRDLLNAALGWDFTTEDYLKIGERIWNAERLFN 538

Query: 541 LKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKE 600
           LKAGLDP ++DTLPKR LEEPMPEGPNKGH VRLKEMLPRYYKLRGWTEDG+IP+EKL+E
Sbjct: 539 LKAGLDPARDDTLPKRFLEEPMPEGPNKGHTVRLKEMLPRYYKLRGWTEDGKIPKEKLEE 598

Query: 601 LGLEEF 606
           LG+ EF
Sbjct: 599 LGIAEF 604


>emb|CAC11939.1| (AL445065) probable aldehyde ferredoxin oxidoreductase
           [Thermoplasma acidophilum]
           Length = 603
           
 Score =  605 bits (1542), Expect = e-172
 Identities = 311/603 (51%), Positives = 409/603 (67%), Gaps = 8/603 (1%)

Query: 3   GYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFA 62
           G+ GKILRV+L  G IK E  N ++A+ ++G +G    + ++E+DPK+DP+ P+N+LI A
Sbjct: 4   GFTGKILRVDLGKGEIKVEDTNMQWARDYIGGQGLATRYYVEEVDPKIDPYDPDNELIIA 63

Query: 63  TGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPVYL 122
            GPLTGTSAPT  RYM +TKSPLTG I  +NSGGYFGA+LK  G+D II +G+++ PVYL
Sbjct: 64  PGPLTGTSAPTAARYMAVTKSPLTGTITRSNSGGYFGAKLKHTGFDMIIFKGRSEKPVYL 123

Query: 123 YIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNGHR 182
           Y+     EIRDAS +WGK V ET   L + +G  +V +A IGPAGEN V+FA++MN+ HR
Sbjct: 124 YVDKGKAEIRDASDLWGKDVFETTDTLTKRIGG-NVSVACIGPAGENLVKFASIMNDKHR 182

Query: 183 AAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPKYG 242
           AAGR GVGAVMGSK LKAIV  G +   + D   +  V+ + ++K+K++PV   GL ++G
Sbjct: 183 AAGRNGVGAVMGSKKLKAIVAGGGRMPAIGDPEMYKAVLPKMLKKIKENPVTSQGLTQFG 242

Query: 243 TAVLVNIINEHGLYPTRNF-QTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNYL 301
           T VLVNIIN  G+Y  RN   +G    A + SGE +A  YLI N+PCFACPIGCGRV   
Sbjct: 243 TEVLVNIINRSGIYSNRNLTDSGDDPLADDVSGETLAETYLIHNQPCFACPIGCGRV-VR 301

Query: 302 PSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYERG 361
            +  E+EGPEYESTWALG N G++DL +II AN  AD  G DTIS G T++ AMELYE+G
Sbjct: 302 YNERESEGPEYESTWALGPNTGVHDLYTIIAANDNADRLGYDTISAGLTISAAMELYEKG 361

Query: 362 LIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMGV 421
            I  +D+G       +FGNT  L     KI  R+ FGD LAEG YRLA+ +      M V
Sbjct: 362 KIPDKDVGPTKP---KFGNTSALLEMTAKIGYRKDFGDKLAEGSYRLAKMYGDESVSMSV 418

Query: 422 KKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPHDISDEKVKMVI 481
           K QE+ AYDPRG  G  L YAT+N GG H++ Y IS EILG     DP  + + K  +V 
Sbjct: 419 KGQEIAAYDPRGVWGLALEYATSNIGGSHMRAYTISNEILGVEPTQDPLQL-EGKADLVK 477

Query: 482 LFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERIWNAERLFNL 541
             QD T ++D +GLC F +F L  DDY +++NA  G+ ++ E+ +K  ER+WN ERLFNL
Sbjct: 478 YVQDFTEVMDCSGLCQFPSFALNLDDYIELVNAVTGFKYTKEEIMKAAERVWNLERLFNL 537

Query: 542 KAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGRIPEEKLKEL 601
           KAG+ P ++D LP+R L+ P+P+GP KG+VV ++++L  YY  RGW   G   EEK+KEL
Sbjct: 538 KAGIKP-EDDKLPERFLKVPLPKGPKKGNVVPMQKLLQDYYGARGWDSRGYPTEEKIKEL 596

Query: 602 GLE 604
           GLE
Sbjct: 597 GLE 599


>gi|11499862 aldehyde ferredoxin oxidoreductase (aor-4) [Archaeoglobus fulgidus]
           >gi|7450435|pir||A69535 aldehyde ferredoxin
           oxidoreductase (aor-4) homolog - Archaeoglobus fulgidus
           >gi|2648240|gb|AAB88974.1| (AE000947) aldehyde
           ferredoxin oxidoreductase (aor-4) [Archaeoglobus
           fulgidus]
           Length = 613
           
 Score =  577 bits (1472), Expect = e-163
 Identities = 312/616 (50%), Positives = 404/616 (64%), Gaps = 22/616 (3%)

Query: 3   GYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGI---YFLLKEMD------PKVDPF 53
           GY GKIL+VNL++G+IKE   +EE A+K+LG +G+ +   Y  L E +        +DP 
Sbjct: 4   GYMGKILKVNLSEGSIKELPIDEEIARKYLGGKGYAVRLLYDYLTEYERLGIAPEDIDPL 63

Query: 54  SPENKLIFATGPLTGTSA-PTGGRYMVIT-KSPLTGYIAMANSGGYFGAELKFAGWDAII 111
             EN LIFATGP TG    P  GRY V+T +SPLTG I  ANSGG FG  +KFAG+D II
Sbjct: 64  GEENVLIFATGPATGVIGFPEPGRYHVMTLRSPLTGGIGSANSGGRFGPYMKFAGYDMII 123

Query: 112 IEGKADHPVYLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKV 171
           +EGK++ PVYL + D + EI+ A  +WGK   +T + L +  G  +  +A IGPAGEN V
Sbjct: 124 VEGKSEEPVYLEVIDGSAEIKCAKDLWGKNTFDTTRILTKRAGG-NCSVACIGPAGENLV 182

Query: 172 RFAAVMNNGHRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKD 231
             A ++N  HRAAGR GVGAVMGSK LKAIVV+G +R E+A   +F    +E ++K+K++
Sbjct: 183 HIACIINEEHRAAGRTGVGAVMGSKKLKAIVVKGSERPEIAKPDEFKAASKEMLDKIKQN 242

Query: 232 PVAGGGLPKYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFAC 291
           PV G GLPKYGTAVLVN+IN  G  P +N+Q    E A E SGE + AKYL +   C+ C
Sbjct: 243 PVTGEGLPKYGTAVLVNVINNAGALPYKNWQEAYNEKADEISGETLEAKYLRKRVACWGC 302

Query: 292 PIGCGRVNYLPS----IGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISL 347
            IGCGR   + +    +  TEGPEYES WALG +  + +L ++I+ANHF DE G+DTIS+
Sbjct: 303 SIGCGRATEVKTGPFKVLNTEGPEYESIWALGNDTAVINLEAVIKANHFCDELGIDTISM 362

Query: 348 GGTLATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYR 407
           G T+A AMELYE+G IK ED+ G +     FG+   +   + + A + G G  LA G  R
Sbjct: 363 GSTIACAMELYEKGYIKDEDLQGLD---LSFGSDAAMVEAVWRTAYKTGIGKYLALGSKR 419

Query: 408 LAERFNGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKM 467
           LAE F   E  M VK  E+PAYDPRG +G GL YAT NRGGCH+  Y +SPEI+G P K+
Sbjct: 420 LAEIFGAPELSMSVKGLEMPAYDPRGIKGIGLNYATANRGGCHVTGYTVSPEIVGLPEKI 479

Query: 468 DPHDISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLK 527
           DP    + K   V  FQD T ++++A  CLFTTF LGA+DY  +L+   GWD + ++ +K
Sbjct: 480 DPLTY-EGKAAWVKAFQDFTCVVNSAVNCLFTTFALGAEDYAVLLSHITGWDLNADEIMK 538

Query: 528 IGERIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGW 587
           IGERI+N ER+   K G D  K+DTLPKRLL EP+ EGP KG VV L  M   YY+LRGW
Sbjct: 539 IGERIYNLERVILNKYGFDG-KDDTLPKRLLTEPLKEGPAKGQVVELDRMKEEYYQLRGW 597

Query: 588 TEDGRIPEEKLKELGL 603
            E+G   +EKLKEL +
Sbjct: 598 -ENGVPTKEKLKELDI 612


>pir||G75154 tungsten-containing aldehyde ferredoxin oxidoreductase  (aor-1)
           PAB2085 - Pyrococcus abyssi (strain Orsay)
           >gi|5457828|emb|CAB49318.1| (AJ248284)
           tungsten-containing aldehyde ferredoxin oxidoreductase
           (aor-1) [Pyrococcus abyssi]
           Length = 628
           
 Score =  411 bits (1046), Expect = e-114
 Identities = 246/626 (39%), Positives = 359/626 (57%), Gaps = 30/626 (4%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M+GY GKILRV+L+  + +    +++ AK ++G RGF I  L  E+ P++ P S  NKL+
Sbjct: 1   MYGYAGKILRVDLSKRSYEVTGLDKKVAKMFIGGRGFNIARLYWEVPPEISPLSEHNKLM 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
            +TGPL GT  P G R  V  +SP TG +  +N GG+FGAE+K+AG+D IIIEGK+D PV
Sbjct: 61  LSTGPLAGTGFPLGSRLNVSARSPQTGLLGDSNVGGHFGAEMKYAGFDQIIIEGKSDKPV 120

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YLYI +  VE  DA  +WG  VSE  + +  E+GD  VQ A IGPA EN V+FA +  N 
Sbjct: 121 YLYITESGVEFMDAEGLWGLRVSEAHREILRELGDWRVQTAIIGPAAENFVKFAGIFFNV 180

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIRE-KIEKLKKDPVAGGGLP 239
           HR A R G+G VM SKNLKAI VRG   VEVA   +F +++ E ++E    +      + 
Sbjct: 181 HRPAARTGMGTVMASKNLKAIAVRGDGFVEVAKPEEFEKLVEEIELETYAHEEYWSRRI- 239

Query: 240 KYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRV- 298
             GT+ ++   N  G+ P R+F     +YAY  SGE +A +Y ++ + CF+C + C RV 
Sbjct: 240 -MGTSRILLAANRIGVLPGRHFTEPEVDYAYLVSGERLALEYNVKTRGCFSCVVPCSRVF 298

Query: 299 -----NYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLAT 353
                 Y   +G  EGPEYE+   +   +G +DL + + A    ++ G+D IS    ++ 
Sbjct: 299 LIKRGKYAGIMG--EGPEYEALAGMTVRIGNSDLDAALYAVKLINDLGLDVISTSEVISW 356

Query: 354 AMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERF- 412
            MELYERG I  ++IGG       +G+ E +   I  IA R G GD+LA+G  + AE+  
Sbjct: 357 LMELYERGDITSDEIGGLKPV---WGDMETVLTLIEDIAYRRGVGDVLADGVLKAAEKLG 413

Query: 413 NGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIK-----QYMISPE----ILGY 463
            G +  M VK  E+   DPRG +G+GLG+A + RG  H++     +   +PE    +LG 
Sbjct: 414 KGKDIAMQVKGLEMIQADPRGLKGYGLGFAVSTRGADHLRSEPFVELTDNPELCRKLLGI 473

Query: 464 PYKMDPHDISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRD---MLNAALGWDF 520
           P       +  + V +V  +++L A++DA  +C      +   DY     +++   G   
Sbjct: 474 PEACKRLGVRGKGV-LVAHYENLCAVVDAIEVCKNLAENMNILDYEKVARLIHVTTGMKM 532

Query: 521 STEDYLKIGERIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPR 580
           +  D   +GERI N ER +  + G+   + D LP+R L +P+P+G +KGHV+ L+ ML  
Sbjct: 533 TARDVELVGERIINMERAYIARLGV-RREHDRLPERFLRKPLPKGASKGHVIELEPMLEE 591

Query: 581 YYKLRGWTEDGRIPEEK-LKELGLEE 605
           YY++R W     IP EK LKELGLE+
Sbjct: 592 YYRIRKWDPGKGIPTEKRLKELGLED 617


>gi|11497644 aldehyde ferredoxin oxidoreductase (aor-1) [Archaeoglobus fulgidus]
           >gi|7450437|pir||G69252 aldehyde ferredoxin
           oxidoreductase (aor-1) homolog - Archaeoglobus fulgidus
           >gi|2650628|gb|AAB91204.1| (AE001105) aldehyde
           ferredoxin oxidoreductase (aor-1) [Archaeoglobus
           fulgidus]
           Length = 592
           
 Score =  384 bits (976), Expect = e-105
 Identities = 240/616 (38%), Positives = 341/616 (54%), Gaps = 35/616 (5%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M G+ GKIL VNL++ T+ E    EE  KK++G  G G   L   +   +DP SPE  L 
Sbjct: 1   MMGFHGKILEVNLSNSTVSEIEVTEEMIKKFVGGAGLGAAMLYSRLTADLDPLSPEAPLA 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           F TG  TG + P  GR++++ KSPLTG    + SGG+F   +K AG D II+ G+A+ P 
Sbjct: 61  FLTGMFTGQT-PFSGRHVIVGKSPLTGLWGESTSGGFFAVSMKKAGIDGIILTGRAEKPT 119

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YL++ D  VE RDA  +WGK  S+T + ++ E  DK  +IA IGPAGEN V++A ++N+ 
Sbjct: 120 YLFVSDGKVEFRDAGDIWGKSTSKTIEIVQNET-DKKARIACIGPAGENLVKYACIINDS 178

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRV-EVADKGKFMEVIREKIEKLKKDPVAGGGL- 238
           HRAAGR G+GAVMGSKNLKAI V G   + +VAD+ K  E     +E +  +P  G  L 
Sbjct: 179 HRAAGRTGMGAVMGSKNLKAIAVVGEVGLPDVADEAKLKEHYSALLESVAANP--GKELW 236

Query: 239 PKYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCG-R 297
             YGT +      E G  P + F  GVF   +  SGEAM   Y ++ + C  CP+ CG R
Sbjct: 237 HTYGTLMYTTQGYELGDTPAKYFTEGVFP-VFRISGEAMLENYEVKPEGCANCPVICGHR 295

Query: 298 VNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMEL 357
           V  +         EYES  +LG+  GI DL  +++A  + +E G+D IS G ++A AM L
Sbjct: 296 VRGVKM-------EYESVASLGSLCGIYDLDGVLDATQYCNEAGLDVISAGVSVAFAMYL 348

Query: 358 YERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFN-GTE 416
            E+GL+K            RFG+ E L   + KI  REG G++LAEG    A++     E
Sbjct: 349 TEKGLLKD---------GVRFGDAEGLLEMLKKIVGREGLGELLAEGTKVAAKKLGVSEE 399

Query: 417 YFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYP------YKMDPH 470
               VK  E+P +DPR   G  L YAT++RG CH+     + +I   P         +  
Sbjct: 400 ETAQVKGLEIPMHDPRAFSGMALTYATSSRGACHLHSDYFTVDIGAAPVPELGVIPTNRF 459

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGE 530
           D S+EKV+M ++ Q    + ++  LC+     +G  D  +  +A  G   +  D  KIGE
Sbjct: 460 DESEEKVRMHVIHQSAKEMWNSYILCMLGL--IGVSDAANFHSAITGESVTPSDVAKIGE 517

Query: 531 RIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTED 590
           R +  +R+ NLK G+   KED     ++  P+ +G   G+   +K ML  YY+LRG  ++
Sbjct: 518 RTYMLKRMINLKLGMK--KEDEKLPEIVRRPLKKGGTGGYSPNVKRMLEIYYRLRGLDDN 575

Query: 591 GRIPEEKLKELGLEEF 606
           G   +EKL++LGL EF
Sbjct: 576 GHPTKEKLEDLGLTEF 591


>pir||G71072 probable formaldehyde:ferredoxin oxidoreductase - Pyrococcus
           horikoshii >gi|3257694|dbj|BAA30377.1| (AP000005) 625aa
           long hypothetical formaldehyde:ferredoxin oxidoreductase
           [Pyrococcus horikoshii]
           Length = 625
           
 Score =  372 bits (946), Expect = e-102
 Identities = 249/624 (39%), Positives = 339/624 (53%), Gaps = 36/624 (5%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M G+WG+ILRVNLT G +K + + EE AKK++G RG   + L  E+   VDP SPENKL+
Sbjct: 5   MKGWWGRILRVNLTTGEVKVQEYPEEIAKKFIGGRGLAAWILWNEVKG-VDPLSPENKLV 63

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
            A GP  G   P+GG+ +V  KSPLTG     N G      L+ AG+DA++IEGKA  PV
Sbjct: 64  IAAGPFNGLPTPSGGKLVVAAKSPLTGGYGDGNLGTMASVHLRRAGYDALVIEGKAKKPV 123

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YLYI D+NV I  A  +WGK   ETEK LK ++  K+V + SIGPAGEN V+FA V++  
Sbjct: 124 YLYIEDDNVSILSAEGLWGKGTFETEKELK-KIHGKNVGVLSIGPAGENLVKFAVVISQE 182

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLP- 239
            RAAGR G+GAVMGSK LKAIVVRG K + VADK +  ++ +E    +   P    G P 
Sbjct: 183 GRAAGRPGMGAVMGSKKLKAIVVRGTKDIPVADKDELKKLSQEAYTDILNAP----GYPF 238

Query: 240 --KYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGR 297
             + GT   +   NE+   PTRNF  G+FE A    G  M     I  + C  C + CG 
Sbjct: 239 WKRQGTMATIEWANENSALPTRNFSDGIFELARPIDGYTMEG-MKINQRGCPYCNMPCGN 297

Query: 298 VNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMEL 357
           V  L + G+    +YE+   LG+NLGI  L  +   N  AD+ GMDTISLGG L   ME 
Sbjct: 298 V-VLDAEGQESELDYENVALLGSNLGIGKLNEVAVLNRIADDMGMDTISLGGVLGFVMEA 356

Query: 358 YERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIA-KREGFGDILAEGGYRLAERFNGTE 416
            ERGLIK      ++E P  FG+ +        IA +R   G+  AEG  R+AE+     
Sbjct: 357 KERGLIK------DDEAP-EFGDFKKAKELALNIAYRRTELGNFAAEGVKRMAEKLGDDS 409

Query: 417 YFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYP----------YK 466
           + M VK  E+  Y+     G  L Y T++ G  H + ++I+ EI   P          YK
Sbjct: 410 FAMHVKGLEVSGYNCYIYPGMALAYGTSSIGAHHKEAWVIAWEIGTAPIEGEQAEKVEYK 469

Query: 467 MDPHDISDEK-VKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDY 525
           +    I  +K V++  L   L  ++ A  L  +   GL  + Y  +L A  G  ++ +D 
Sbjct: 470 ISYDPIKAQKVVELQRLRGGLFEMLTACRL-PWVEIGLSLEYYPKLLKAITGVTYTWDDL 528

Query: 526 LKIGERIWNAERLFNLKA--GLDPLKEDTLPKRLLEEPMPEGPNKG-HVVRLK--EMLPR 580
            K  +R++   R + ++   G    + D  PKR   E +  GP KG H+ R K   +L  
Sbjct: 529 YKAADRVYALIRAYWVREFNGNWSREMDYPPKRWFNEGLKSGPYKGQHLDRDKYDALLSE 588

Query: 581 YYKLRGWTEDGRIPEEKLKELGLE 604
           YY++RGW E G   +E LK+L L+
Sbjct: 589 YYRIRGWDERGIPKKETLKQLELD 612


>pdb|1B25|A Chain A, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
           Furiosus >gi|4699680|pdb|1B25|B Chain B, Formaldehyde
           Ferredoxin Oxidoreductase From Pyrococcus Furiosus
           >gi|4699681|pdb|1B25|C Chain C, Formaldehyde Ferredoxin
           Oxidoreductase From Pyrococcus Furiosus
           >gi|4699682|pdb|1B25|D Chain D, Formaldehyde Ferredoxin
           Oxidoreductase From Pyrococcus Furiosus
           >gi|5107460|pdb|1B4N|A Chain A, Formaldehyde Ferredoxin
           Oxidoreductase From Pyrococcus Furiosus, Complexed With
           Glutarate >gi|5107461|pdb|1B4N|B Chain B, Formaldehyde
           Ferredoxin Oxidoreductase From Pyrococcus Furiosus,
           Complexed With Glutarate >gi|5107462|pdb|1B4N|C Chain C,
           Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
           Furiosus, Complexed With Glutarate
           >gi|5107463|pdb|1B4N|D Chain D, Formaldehyde Ferredoxin
           Oxidoreductase From Pyrococcus Furiosus, Complexed With
           Glutarate >gi|4106536|gb|AAD02881.1| (AF102769)
           formaldehyde ferredoxin oxidoreductase [Pyrococcus
           furiosus]
           Length = 619
           
 Score =  370 bits (941), Expect = e-101
 Identities = 239/624 (38%), Positives = 340/624 (54%), Gaps = 38/624 (6%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M+G+WG+ILRVNLT G +K + + EE AKK++G RG   + L  E    V+P SPENKLI
Sbjct: 1   MYGWWGRILRVNLTTGEVKVQEYPEEVAKKFIGGRGLAAWILWNEARG-VEPLSPENKLI 59

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FA GP  G   P+GG+ +V  KSPLTG     N G      L+ AG+DA+++EGKA  PV
Sbjct: 60  FAAGPFNGLPTPSGGKLVVAAKSPLTGGYGDGNLGTMASVHLRRAGYDALVVEGKAKKPV 119

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+YI D+NV I  A  +WGK   ETE+ LK E+  K+V + +IGPAGEN V++A V++  
Sbjct: 120 YIYIEDDNVSILSAEGLWGKTTFETERELK-EIHGKNVGVLTIGPAGENLVKYAVVISQE 178

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLP- 239
            RAAGR G+GAVMGSK LKA+V+RG K + VADK +  ++ +E   ++   P    G P 
Sbjct: 179 GRAAGRPGMGAVMGSKKLKAVVIRGTKEIPVADKEELKKLSQEAYNEILNSP----GYPF 234

Query: 240 --KYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGR 297
             + GT   V   N +   PTRNF  G FE+A    G  M     ++ + C  C + CG 
Sbjct: 235 WKRQGTMAAVEWCNTNYALPTRNFSDGYFEFARSIDGYTMEG-MKVQQRGCPYCNMPCGN 293

Query: 298 VNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMEL 357
           V  L + G+    +YE+   LG+NLGI  L  +   N  ADE GMDTISLG ++A  ME 
Sbjct: 294 V-VLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVMEA 352

Query: 358 YERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREG-FGDILAEGGYRLAERFNGTE 416
            ERG++K+            FG+ +        IA R+G  G++ AEG   +AE+    +
Sbjct: 353 VERGILKEGP---------TFGDFKGAKQLALDIAYRKGELGNLAAEGVKAMAEKLGTHD 403

Query: 417 YFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYP----------YK 466
           + M VK  E+  Y+        L Y T+  G  H + ++I+ EI   P          YK
Sbjct: 404 FAMHVKGLEVSGYNCYIYPAMALAYGTSAIGAHHKEAWVIAWEIGTAPIEGEKAEKVEYK 463

Query: 467 MDPHDISDEK-VKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDY 525
           +    I  +K V++  L   L  ++ A  L  +   GL  D Y  +L A  G  ++ +D 
Sbjct: 464 ISYDPIKAQKVVELQRLRGGLFEMLTACRL-PWVEVGLSLDYYPKLLKAITGVTYTWDDL 522

Query: 526 LKIGERIWNAERLFNLKA--GLDPLKEDTLPKRLLEEPMPEGPNKGHVV---RLKEMLPR 580
            K  +R+++  R + ++   G    K D  PKR   E +  GP+KG  +   +  E+L  
Sbjct: 523 YKAADRVYSLIRAYWVREFNGKWDRKMDYPPKRWFTEGLKSGPHKGEHLDEKKYDELLSE 582

Query: 581 YYKLRGWTEDGRIPEEKLKELGLE 604
           YY++RGW E G   +E LKEL L+
Sbjct: 583 YYRIRGWDERGIPKKETLKELDLD 606


>pir||A75101 formaldehyde:ferredoxin oxidoreductase PAB0798 - Pyrococcus abyssi
           (strain Orsay) >gi|5458622|emb|CAB50110.1| (AJ248286)
           FORMALDEHYDE:FERREDOXIN OXIDOREDUCTASE [Pyrococcus
           abyssi]
           Length = 621
           
 Score =  369 bits (938), Expect = e-101
 Identities = 245/624 (39%), Positives = 339/624 (54%), Gaps = 36/624 (5%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M G+WG+ILRVNLT G +K + + EE AKK++G RG   + L  E+   VDP SPENKL+
Sbjct: 1   MKGWWGRILRVNLTTGEVKVQEYPEEVAKKFIGGRGLAAWILWNEVKG-VDPLSPENKLV 59

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FA GP  G   P+GG+ +V  KSPLTG     N G      L+ AG+DA+++EGKA  PV
Sbjct: 60  FAAGPFNGLPTPSGGKLVVAAKSPLTGGYGDGNLGTMASVHLRRAGYDALVVEGKAKKPV 119

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+YI D+NV I  A  +WGK   ETE+ LK ++  K+V I SIGPAGEN V+FA VM+  
Sbjct: 120 YIYIEDDNVSILSAEGLWGKGTFETERELK-KIHGKNVGILSIGPAGENLVKFAVVMSQE 178

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLP- 239
            RAAGR G+GAVMGSK LKA+V++G K + VADK +  ++  E    +   P    G P 
Sbjct: 179 GRAAGRPGMGAVMGSKKLKAVVIKGSKDIPVADKEELKKLSGEAYNDILNAP----GYPF 234

Query: 240 --KYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGR 297
             + GT   V   NE+   PTRNF  G FE+A    G  M     ++ + C  C + CG 
Sbjct: 235 WKRQGTMAAVEWTNENSALPTRNFSDGSFEFARSIDGYTMEG-MKVKQRGCPYCNMPCGN 293

Query: 298 VNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMEL 357
           V  L + G+    +YE+   LGANLGI  L  +   N  AD+ GMDTISLGG +   ME 
Sbjct: 294 V-VLDAEGQESELDYENVALLGANLGIGKLNEVAVLNRIADDMGMDTISLGGVIGFVMEA 352

Query: 358 YERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIA-KREGFGDILAEGGYRLAERFNGTE 416
            E+GLIK      ++E P  FG+ +        IA +R   G+  AEG  R+AE+     
Sbjct: 353 KEKGLIK------DDEAP-EFGDFKKAKELALNIAYRRTELGNFAAEGVKRMAEKLGDDS 405

Query: 417 YFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYP----------YK 466
           + M VK  E+  Y+        L Y T++ G  H + ++I+ EI   P          YK
Sbjct: 406 FAMHVKGLEVSGYNCFIYPAMALAYGTSSIGAHHKEAWVIAWEIGTAPIEGEQAKKVEYK 465

Query: 467 MDPHDISDEK-VKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDY 525
           +    +  EK V++  L   L  ++ A  L  +   GL  + Y  +L A  G  ++ +D 
Sbjct: 466 ITYDPVKAEKVVELQRLRGGLFEMLTACRL-PWVEIGLSLEYYPKLLKAITGVTYTWDDL 524

Query: 526 LKIGERIWNAERLFNLKA--GLDPLKEDTLPKRLLEEPMPEGPNKG-HVVRLK--EMLPR 580
            K  +RI+   R + ++   G    + D  PKR   E +  GP KG H+ R K   +L  
Sbjct: 525 YKAADRIYALIRAYWVREFNGNWGREMDYPPKRWFNEGLKSGPYKGQHLDREKYDALLSE 584

Query: 581 YYKLRGWTEDGRIPEEKLKELGLE 604
           YY++RGW E G   +E LK+L L+
Sbjct: 585 YYRIRGWDERGIPTKETLKKLDLD 608


>sp|Q56303|FOR_THELI FORMALDEHYDE:FERREDOXIN OXIDOREDUCTASE >gi|1016359|emb|CAA58795.1|
           (X83963) formaldehyde:ferredoxin oxidoreductase
           [Thermococcus litoralis]
           Length = 621
           
 Score =  362 bits (920), Expect = 5e-99
 Identities = 237/628 (37%), Positives = 334/628 (52%), Gaps = 44/628 (7%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M G+WGKILRV+LT+  +  + ++ E AK ++G RG   + L  E    VDP  P+NKL+
Sbjct: 1   MKGWWGKILRVDLTNNKVWVQEYSPEVAKNFIGGRGLAAWILWNEAK-NVDPLGPKNKLV 59

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FATGP  G   P+GG+ ++  KSPLTG     N G      L+ AG+DA+++EGKA  PV
Sbjct: 60  FATGPFNGLPTPSGGKMVIAAKSPLTGGYGDGNLGTMATVHLRKAGYDALVVEGKAKKPV 119

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+YI D+NV I  A  +WGK   ETE+ LK E+  K+V I SIGP GEN V++A V++  
Sbjct: 120 YIYIEDDNVSILSAEGLWGKTTFETERELK-EIHGKNVGILSIGPGGENLVKYAVVISQE 178

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLP- 239
            RAAGR G+GAVMGSK LKA+V++G K + VADK K  E+ +E  + +   P    G P 
Sbjct: 179 GRAAGRPGMGAVMGSKKLKAVVIKGTKEIPVADKEKLKELSQEAYDAILNSP----GYPF 234

Query: 240 --KYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGR 297
             + GT   V   NE+   PTRNF  G FE+A    G  M     ++ + C  C + CG 
Sbjct: 235 WHRQGTMAAVEWTNENSALPTRNFSDGSFEFARSIDGYTMEG-MKVKQRGCPYCNMPCGN 293

Query: 298 VNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMEL 357
           V  L + G+    +YE+   LG+NLGI  L  +   N  ADE G+DTISLG  ++  ME 
Sbjct: 294 V-VLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGLDTISLGVAISYVMEA 352

Query: 358 YERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREG-FGDILAEGGYRLAERFNGTE 416
            E+G+IK +D          FG+ +        IA R G  G++ AEG   ++E+    +
Sbjct: 353 KEKGIIKDDDAP-------EFGDFKKAKQLALDIAYRRGELGNLAAEGVKVMSEKLGAKD 405

Query: 417 YFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEI------------LGYP 464
           + M VK  E+  Y+        L Y T++ G  H + ++I+ EI            + Y 
Sbjct: 406 FAMHVKGLEVSGYNCYIYPAMALAYGTSSIGAHHKEAWVIAWEIGTAPIEGEKAQKVEYK 465

Query: 465 YKMDPHDISDEKVKMVILFQDLT-ALIDAAGLCL--FTTFGLGADDYRDMLNAALGWDFS 521
              DP     EK   VI  Q L   L +    C   +   GL  D Y  +L A  G  ++
Sbjct: 466 ITYDP-----EKAAKVIELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLEAITGVKYT 520

Query: 522 TEDYLKIGERIWNAERLFNLKA--GLDPLKEDTLPKRLLEEPMPEGPNKG-HVVRLK--E 576
            +D  K  +R++   R + ++   G    + D  P+R  +E +  GP KG H+ + K   
Sbjct: 521 WDDLYKAADRVYALMRAYWVREFNGNWSREMDYPPERWFKEGLKSGPYKGQHLEKDKYDA 580

Query: 577 MLPRYYKLRGWTEDGRIPEEKLKELGLE 604
           +L  YYKLRGW E G   +E LKEL LE
Sbjct: 581 LLSEYYKLRGWDERGIPKKETLKELNLE 608


>gb|AAD02878.1| (AF101432) formaldehyde ferredoxin oxidoreductase WOR4 [Pyrococcus
           furiosus]
           Length = 622
           
 Score =  355 bits (901), Expect = 9e-97
 Identities = 232/622 (37%), Positives = 336/622 (53%), Gaps = 37/622 (5%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           MFGY GKI RVNLT G +K E   EE  +K++G +G G Y + KE+ P  DP SP NK +
Sbjct: 1   MFGYKGKIARVNLTTGKVKYEDLPEEIIRKFIGGKGLGYYIIYKEVPPGTDPLSPANKFV 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FATG LTG   P G + + ++KSP T  I  ++ G  FG +LK   +DA+IIEG+++ PV
Sbjct: 61  FATGGLTGL-VPGGSKVIAVSKSPTTRLITDSSGGDAFGPKLK-GHFDALIIEGRSEEPV 118

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YLYIHD  VEI  A  +WGK   E  K + ++       IA IGPAGE   R A V+ + 
Sbjct: 119 YLYIHDGKVEINPAEHLWGKGTYEVAKEIWKD--HPSASIAMIGPAGEKMSRMANVVYDT 176

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
            RA+GRGG+GAV+GSK +KAIVV   +R +VA   +F ++  E  +K   DP       K
Sbjct: 177 ERASGRGGLGAVLGSKRVKAIVVEPGERPKVAHTEEFQQLWSEFYKKFSTDP-KYADTRK 235

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVF--EYAYEQSG-----EAMAAKYLIRNKPCFACPI 293
           YGT   +    E G+    NF       E A + SG       +  ++ I  K   +CPI
Sbjct: 236 YGTTTALLWAAEVGMGSAYNFSKPHIPEELAKKLSGLEIERYEIEPEWYIHGK---SCPI 292

Query: 294 GCGRVNYLPSIGE--TEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTL 351
            C     +   G+     PEYES   LGA  G+ DL ++       + YG+D+I+ G T+
Sbjct: 293 KCSMYMEIEYKGKKIRVKPEYESLGMLGAATGVFDLPAVSYFIWLVNNYGLDSIATGNTI 352

Query: 352 ATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAER 411
           A  +EL ERGLI +E+IG    P   FG+ E +   IH IA+R+G G +LA+G  R  ER
Sbjct: 353 AWFLELVERGLITEEEIG---FPVKGFGDAEAVERLIHLIAERKGIGAVLADGVKRACER 409

Query: 412 F-NGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPH 470
              G E+ + VK  E PA+DPRG   + L YAT + G  H++ +         P+++   
Sbjct: 410 LGRGCEFAVHVKGLESPAWDPRGRRTYALSYATADIGASHLRGW-------PSPHQLPND 462

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGE 530
             + E V  +I  +D   +I+  G+C F  + L  DD   + + A G ++S E   ++ +
Sbjct: 463 GPAKELVPSLIEDRDYMYIINMLGVCKFVPYTL--DDLAKLYSLATGEEWSVEKLRRVAQ 520

Query: 531 RIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLK-----EMLPRYYKLR 585
            + +  R++N    + P  +DT+P R   EP  +GP KG+   +      E    +Y+LR
Sbjct: 521 AVESMARIYNALEWITPPLDDTIPPRWW-EPEKDGPAKGNAAFIDYNDFLEARREFYRLR 579

Query: 586 GWTEDGRIP-EEKLKELGLEEF 606
           GW E+  +P  E +++LG  EF
Sbjct: 580 GWDEELGVPLPETMEKLGYPEF 601


>gi|11497952 aldehyde ferredoxin oxidoreductase (aor-3) [Archaeoglobus fulgidus]
           >gi|7450436|pir||D69292 aldehyde ferredoxin
           oxidoreductase (aor-3) homolog - Archaeoglobus fulgidus
           >gi|2650295|gb|AAB90895.1| (AE001081) aldehyde
           ferredoxin oxidoreductase (aor-3) [Archaeoglobus
           fulgidus]
           Length = 598
           
 Score =  351 bits (892), Expect = 1e-95
 Identities = 222/612 (36%), Positives = 333/612 (54%), Gaps = 25/612 (4%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M+GY GKILRV+L++ T+      E+  ++++G  G+ +         +VDP SP+N L+
Sbjct: 1   MYGYCGKILRVDLSEKTVSTLIPEEKDLREFIGGAGYAVKLHYDMRSFEVDPLSPQNPLV 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
             TGPLT T AP+  R     +SP TG    +NSGG   A LK+AGWD II+EG +D PV
Sbjct: 61  IVTGPLTATKAPSTSRLEFCARSPFTGIWGESNSGGRMAAYLKYAGWDGIIVEGASDKPV 120

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
            L +     EI DA  +WGK   ET++ +++++G+K V  A IGPAGEN V++A +  + 
Sbjct: 121 LLKVDLTGAEILDAEHLWGKGCYETQEQIEKDLGEKRVATAVIGPAGENLVKYACIQVDN 180

Query: 181 HRAAGRGGVGAVMGSKNLKAIVV----RGHKRVEVADKGKFMEVIREKIEKLKKDPVAGG 236
            R AGR GVGAVMGSK LK I V       +RVEVAD+  F  V+ E ++++ KD     
Sbjct: 181 SRHAGRTGVGAVMGSKKLKGIAVVYDPSERQRVEVADEEGFNRVVDEVLQRI-KDDFTCN 239

Query: 237 GLPKYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCG 296
              + GT+  +      G  P + +  G ++ A + SG AMAA  L  N  C  C + CG
Sbjct: 240 MFTQLGTSGYMETAEGFGDLPIKYYTQGTWDGATKISGAAMAASVLRGNDGCLGCVVRCG 299

Query: 297 RVNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAME 356
           RV       +  GPEYE+  A GA    +DL S+IE N+  ++ GMD+IS G ++A AM 
Sbjct: 300 RVVEHKG-KQIHGPEYETLAAFGALQLNDDLESLIEINYLVNDLGMDSISAGVSVAFAMY 358

Query: 357 LYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTE 416
           L E+G      +G  N    ++G+ E +   +  IA R G G+ LAEG   +  ++    
Sbjct: 359 LTEKG------VGDFN---IKWGDAEAVKQMVKDIACRRGKGEELAEGVRFIGLKYGKEA 409

Query: 417 YFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQ----YMISPEILGYPYKMDPHDI 472
           +   VK  E+P +D R        YAT+ RG CH+      Y +   I  Y  K D    
Sbjct: 410 WSAHVKGLEIPMHDARAFSSLAAAYATHPRGACHLPHQMYLYEMGKTISEYGIKSDDRFS 469

Query: 473 SDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGERI 532
           ++ K  +    Q+ + L +A  +C F    +      +ML A  G++++ E+    GER+
Sbjct: 470 NEGKGILAAKVQNFSELFNAITMCAF--MPVKPRHIAEMLRAVTGYNYTVENIYTAGERM 527

Query: 533 WNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTEDGR 592
           +  +R++N+K G+   + DTLP+ +L +P+ EG + G+V  +K+ +   Y+ R W E G 
Sbjct: 528 FTLKRVYNVKCGV-KAEHDTLPEIVL-QPL-EGGSAGNVPDVKKQVSELYEFRKWPE-GV 583

Query: 593 IPEEKLKELGLE 604
              EKL+ELGLE
Sbjct: 584 PSREKLEELGLE 595


>pir||A71221 probable aldehyde:ferredoxin oxidoreductase - Pyrococcus horikoshii
           >gi|3256413|dbj|BAA29096.1| (AP000001) 621aa long
           hypothetical aldehyde:ferredoxin oxidoreductase
           [Pyrococcus horikoshii]
           Length = 621
           
 Score =  331 bits (840), Expect = 1e-89
 Identities = 221/622 (35%), Positives = 334/622 (53%), Gaps = 37/622 (5%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M GY  +I RVNLT+G +K E  +++  +K++G +G G Y + KE+ P  DP SP NK++
Sbjct: 4   MRGYKNRIARVNLTNGEVKYERLDDDVIRKFIGGKGLGYYIIYKEVPPGTDPLSPGNKIV 63

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           FA G LTG   P   + + ++KSP T  I  ++ G  FG +LK   +DA+IIEGK++ PV
Sbjct: 64  FAPGGLTGL-IPGSSKVITVSKSPETRLITDSSGGDAFGPKLK-GHFDALIIEGKSEEPV 121

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YLYIHD  V+I  A ++WGK   ET + L ++  +    IASIGPAGE  VR A ++ + 
Sbjct: 122 YLYIHDGGVDILPAGELWGKGNYETARELWKKYPE--ASIASIGPAGERLVRIANIIYDT 179

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
            RA+GRGG+GAVMGSK LKAIVV   ++ EVA+  +F  +  E  E+   DP        
Sbjct: 180 QRASGRGGLGAVMGSKKLKAIVVEPGEKPEVANPEEFEALWNEFYERFSTDPKYEHS-RN 238

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVF--EYAYEQSGE-----AMAAKYLIRNKPCFACPI 293
           YGT   +      G+ P  NF       E A + +G+      +  ++ I  K   +CPI
Sbjct: 239 YGTTDGLRSSASLGMSPAYNFSRPYIPEELASKLAGDEVKKYEVEPEWYIHGK---SCPI 295

Query: 294 GCGRVNYLPSIGE--TEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTL 351
            C R   +   G      PEYES   LGA  G+ +L ++   N  A++ G+D+I+ G  +
Sbjct: 296 KCARYIEVEYKGRKIRVKPEYESLAMLGAATGVFNLKAVAYFNWLANDLGLDSIASGNVI 355

Query: 352 ATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAER 411
               EL ERGLI +E+IG   E    FG+ E     +H +A+R+G G +LAEG  R  E 
Sbjct: 356 GWLFELVERGLISEEEIGFRVE---GFGDEEAEEKLLHLMAERKGIGAVLAEGVKRACEI 412

Query: 412 F-NGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPH 470
              G E+ + VK  E PA+DPRG   +GL YAT + G  H++ +         P+++   
Sbjct: 413 LGRGCEFAVHVKGLEAPAWDPRGRRTYGLSYATADVGASHLRGW-------PSPHQLPNQ 465

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGE 530
             + + V  +I  +D + + D  G+C F  + +  +D     +   G +++ +   K+  
Sbjct: 466 GPAKDLVPSLIEGRDESYITDMLGVCKFVPYKM--EDLARFYSLTTGEEWNVDKLRKVAW 523

Query: 531 RIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLK-----EMLPRYYKLR 585
            + +  R+ +    + P  +D +P R   EP PEGP KG+   +      E    +Y+LR
Sbjct: 524 AVESIARIHDALDWVTPPIDDVIPPRWW-EPEPEGPAKGNAAFIDYNDFIESRREFYRLR 582

Query: 586 GWTEDGRIP-EEKLKELGLEEF 606
           GW E+  +P  E L++LG  EF
Sbjct: 583 GWHEELGVPLPETLEKLGYPEF 604


>pir||E75188 aldehyde ferredoxin oxidoreductase (aor-3) PAB2330 - Pyrococcus
           abyssi (strain Orsay) >gi|5457465|emb|CAB48956.1|
           (AJ248283) aldehyde ferredoxin oxidoreductase (aor-3)
           [Pyrococcus abyssi]
           Length = 624
           
 Score =  328 bits (832), Expect = 1e-88
 Identities = 220/622 (35%), Positives = 335/622 (53%), Gaps = 37/622 (5%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M GY GKILRV+LTDG    E+ ++E  +K++G +G G Y + +E+ P  DP SP NKL+
Sbjct: 8   MKGYKGKILRVDLTDGKTSVESLSDEIVEKFVGGKGLGYYIIYREVPPGTDPLSPGNKLL 67

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           F  G LTG   P   + + ++KSP T  I+ ++ G  FG +L+   +DA+IIEG+A+ PV
Sbjct: 68  FVPGALTGL-IPGSSKVIAVSKSPETMLISDSSGGDAFGPKLR-GHFDALIIEGRAEEPV 125

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           YL+I+D   EIR A  +WGK   E  K L  +    +  IASIGPAGE  V+ A ++ + 
Sbjct: 126 YLHIYDGQAEIRPAKDLWGKGNYEVAKELWGKY--PNASIASIGPAGERLVKIANIVYDT 183

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
            RA+GRGG+GAVMGSKNLKA+VV   ++ EVA+  +F ++  E  EK  KDP        
Sbjct: 184 ERASGRGGLGAVMGSKNLKAVVVEPGEKPEVANPEEFKKLWDEFYEKFSKDPKYEHS-RN 242

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVF--EYAYEQSGE-----AMAAKYLIRNKPCFACPI 293
           YGT   +      G+ P  NF       E A + +G+      +  ++ I  K   +CPI
Sbjct: 243 YGTTDGLRSSASLGMSPAYNFSRPYIPEELASKLAGDEVKKYEVEPEWYIHGK---SCPI 299

Query: 294 GCGRVNYLPSIGE--TEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTL 351
            C R   +   G      PEYES   LGA  G+ +L ++   N  A+  G+D+I+ G  +
Sbjct: 300 KCARYIEVEYKGRKIRVKPEYESLAMLGAATGVFNLRAVAYFNWLANNLGLDSIASGNVI 359

Query: 352 ATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAER 411
               E+ ERGLI +++IG   +    FG+ E     ++ IA+R+G G ILAEG  R  E 
Sbjct: 360 GWLFEMVERGLISEDEIGFSVK---GFGDEEAEERLLNLIAERKGIGAILAEGVKRACEI 416

Query: 412 F-NGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYKMDPH 470
              G E+ + VK  E PA+DPRG   + L YAT + G  H++ +         P+++   
Sbjct: 417 LGRGCEFAVHVKGLEAPAWDPRGRRTYALSYATADVGASHLRGW-------PRPHQLPNQ 469

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGE 530
             + E V  +I  +D + + D  G+C F  + +  +D     + + G +++ E   K+  
Sbjct: 470 GPAKELVPSLIESRDESYITDMLGVCKFVPYSM--EDLARFYSLSTGKEWTVEKLRKVAW 527

Query: 531 RIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLK-----EMLPRYYKLR 585
            + +  R+ N+   + P  +D +P+R   EP  +GP KG+   +      E    +Y+LR
Sbjct: 528 AVESIARIHNVLDWVTPPLDDVIPQRWW-EPEQDGPAKGNAAFIDYNDFLEARREFYRLR 586

Query: 586 GWTEDGRIP-EEKLKELGLEEF 606
           GW E+  +P  E L++LG  EF
Sbjct: 587 GWDEELGVPLPETLEKLGYPEF 608


>emb|CAC11963.1| (AL445065) tungsten-containing aldehyde ferredoxin oxidoreductase
           related protein [Thermoplasma acidophilum]
           Length = 591
           
 Score =  313 bits (794), Expect = 3e-84
 Identities = 203/597 (34%), Positives = 312/597 (52%), Gaps = 31/597 (5%)

Query: 3   GYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFA 62
           G+W K++ V+L+   +  +  +E+  +K++G  G G Y   K      DPFS +N +I  
Sbjct: 6   GFWNKLIFVDLSGRDVWFDGLSEDLWEKYMGGVGLGSYLFTK-YGGNFDPFSEKNPIIIM 64

Query: 63  TGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPVYL 122
           TGPL GT+ P  GR+ V+++SPLT ++  +NSGG FG ELK +G D ++I GK+D PV +
Sbjct: 65  TGPLVGTAFPNSGRHEVVSRSPLTTFLGESNSGGRFGFELKRSGSDGMVITGKSDVPVSI 124

Query: 123 YIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNGHR 182
           +I D +V + +   +WG  + ET+  +K+E   K+  +  IGPAGEN+V F+++MN+  R
Sbjct: 125 FIDDGDVRLAETPDLWGLDIYETQAKMKKE---KNYSVMCIGPAGENRVLFSSIMNDEGR 181

Query: 183 AAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPKYG 242
           AAGR G+GAVMGSK LKAI V G K VEV ++ ++  +++E  + + + PV   G   YG
Sbjct: 182 AAGRTGLGAVMGSKKLKAIAVYGRKIVEVNNRAEYNRIVKEASKSIIESPVV-SGFRSYG 240

Query: 243 TAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCGRVNYLP 302
           + + ++        P   F    F++  + S      +Y + +  C AC IGCGR     
Sbjct: 241 SMIWMDGGIGFNDIPANYFMDRNFQFD-DLSSIKFHEEYSVSSYNCAACVIGCGRTVRYN 299

Query: 303 SIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYERGL 362
            +   +GPEYE+  ALG  LG      IIE NH  +  GMDTIS G  ++      + GL
Sbjct: 300 GL-TVDGPEYETVAALGPLLGNTSFQKIIEWNHEINRLGMDTISTGVIVSAIRHFIKAGL 358

Query: 363 IKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFN-GTEYFMGV 421
           +    +       +  G+ E +   I  IA R G GD +A+G YR A       +    V
Sbjct: 359 VNDGSV-----ESYYSGSFEKIGQMIQDIAMRRGSGDRIADGLYRFASSLGIDRDLIATV 413

Query: 422 KKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILG-YP---------YKMDPHD 471
           K  E+P +DPR  +  G+ YAT+ RG  H++  M   +I G +P         + +D   
Sbjct: 414 KGLEIPLHDPRAFKAQGIVYATSTRGADHMQGDMYQIDIGGDHPDLGIVSGDRFSVD--- 470

Query: 472 ISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGER 531
            SD++V+ VI  QD   + ++  +C +       +        A G+D S +D +  G  
Sbjct: 471 -SDDRVRTVIRTQDFRQVYNSLIICYYAQ--PDPETIAKAYALATGFDSSIKDLVDRGSE 527

Query: 532 IWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKG-HVVRLKEMLPRYYKLRGW 587
           I N +R  N   G+ P ++D LP  +      E P  G     L   + RYY+LRGW
Sbjct: 528 IINLKRRINEGLGMRP-EDDWLPAIVRMPIEGESPESGTSDEELISAIQRYYRLRGW 583


>emb|CAC12268.1| (AL445066) tungstealdehyde ferredoxaldehyde ferredoxin
           oxidoreductase related protein [Thermoplasma
           acidophilum]
           Length = 623
           
 Score =  286 bits (725), Expect = 4e-76
 Identities = 207/624 (33%), Positives = 309/624 (49%), Gaps = 28/624 (4%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           M+G+ GKIL  +LT+  +  E   E+  KK+LG  G G Y L +E+   +D   P+N L 
Sbjct: 1   MYGFNGKILWADLTNEKMWVEEIPEDIYKKYLGGVGLGAYILNREIKGNIDALGPDNILG 60

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           F TG     +AP GGR  V+ KSP+TG    +N GG F  ELK  G+DA+ ++G A  PV
Sbjct: 61  FITGLFNSHNAPLGGRLEVVAKSPMTGTWGDSNCGGKFAPELKNTGFDALFVKGIAKRPV 120

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+ I D+   I DAS +WGK   ETE  LK+   D   Q   IG  GE  +  AA+MN  
Sbjct: 121 YIKIVDDKYSIEDASNLWGKDAYETETELKKI--DPKGQAMVIGVPGEKMLYAAAIMNEY 178

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
            RAAGR G+ AVMGSK LK I  RG K++ V D+   ME I++   + +           
Sbjct: 179 GRAAGRSGLAAVMGSKKLKGIFARGTKKIPVYDEKMLMETIKKAQIQFRNSMNLVNPWHM 238

Query: 241 YGTAVLVNIINEHGLYPTRNFQ-TGVFEYAYEQ----SGEAMAAKYLIRNKPCFACPIGC 295
           +GT  +    + +G  P +N+   G+ ++  E     SGE +  K ++++  C  C + C
Sbjct: 239 FGTTQITESSHLNGDTPIKNWAGVGIVDFGEENAKKISGEEI-RKDVLKSYGCAQCTLAC 297

Query: 296 -GRVNYLPSIGETEGP--EYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLA 352
            G V      G  EG   EYE T A G    I DL ++  +    + YG+D I+ G  +A
Sbjct: 298 GGHVKRETRYGTVEGHRLEYEGTGAFGGLNLIADLDAMSMSFELCNRYGLDIITTGAVIA 357

Query: 353 TAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERF 412
            A ELYERG++ ++DIG +      FGN +        I K EG G IL   G R A + 
Sbjct: 358 FANELYERGILTEKDIGFK----IGFGNPDAEVKLTELIGKGEGIGRILGM-GQRYAAKV 412

Query: 413 NG---TEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPE----ILGYPY 465
            G    E  M +  Q+LP +DPR     G  Y ++   G H    +   E    +L + +
Sbjct: 413 IGKGAEESAMEIGGQDLPMHDPRLMPSLGNTYISDATPGRHTAGGIGFNEGFELVLPFKH 472

Query: 466 KMDPHDISDEKVKMVILFQDLTA----LIDAAGLCLFTT-FGLGADDYRDMLNAALGWDF 520
           K     I   +      +Q L+     ++++ G+CLF+T     +  Y +++ A  GWD 
Sbjct: 473 KDSWTKIPRYEYHGKAYWQLLSVAGQEILNSTGMCLFSTNIWPNSYPYTELIKAITGWDM 532

Query: 521 STEDYLKIGERIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPR 580
           + +D + IG RI  A  +F+ K G++  +     + +   P+  GP  G  +  + +   
Sbjct: 533 TEDDLVNIGWRIQIARHVFSAKQGINQYEIKPPGRVMGYPPLKAGPTAGVSIDYETLRNE 592

Query: 581 YYKLRGWTEDGRIPEEKLKELGLE 604
           Y    G   DG+   E +K+LG+E
Sbjct: 593 YLSQLGLARDGKPNPEVIKKLGIE 616


>gb|AAD02879.1| (AF101433) formaldehyde ferredoxin oxidoreductase WOR5 [Pyrococcus
           furiosus]
           Length = 582
           
 Score =  271 bits (685), Expect = 2e-71
 Identities = 204/597 (34%), Positives = 303/597 (50%), Gaps = 66/597 (11%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPK---VDPFSPEN 57
           M+ Y GK+L V+LT   +KE   +E+  KK+ G RG G Y L KE+  K   VDP   EN
Sbjct: 1   MYAYNGKLLDVDLTREKVKEVELSEDVLKKFYGGRGLGTYILWKELGEKWEKVDPLGEEN 60

Query: 58  KLIFATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKAD 117
            L+  TGPLTG     G +  +++KSP +  +  +      G ELK AG+D III GKA 
Sbjct: 61  LLLILTGPLTGYYP--GMKTSIVSKSPESNGVVGSVLSSELGLELKAAGYDGIIIRGKAK 118

Query: 118 HPVYLYIHDENVEIRDASKVWGKLVSETEKALKEEVGD------------KHVQIASIGP 165
            PVYL+IH++ VEIRDA+K WG    E  K L +EV +            K   +  IG 
Sbjct: 119 SPVYLFIHNDTVEIRDATKYWGMGGIELYKTLLKEVHEEIRKKEKLKGVPKEPAMIYIGK 178

Query: 166 AGENKVRFAAVMNNGHRAAGRGGVGAVMGSKNLKAIVVRGHKRV-EVADKGKFMEVIREK 224
            GENKVRFAA+M     AAG GG GAVMGSKNLKA++ +G   + EV DK K   ++RE 
Sbjct: 179 GGENKVRFAAIMTKLMHAAGYGGYGAVMGSKNLKAVIAKGSGPLPEVYDKEKMKVLLRE- 237

Query: 225 IEKLKKDPVAGGGLPKYGT-AVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLI 283
                K+  +     ++GT A   ++ ++    P RN+Q    +             ++ 
Sbjct: 238 ---FWKELFSMTTFREWGTGAGGYSVGHDRSSEPIRNWQEEYHDNEEISVVNFENRTWIK 294

Query: 284 RNKPCFACPIGCGRVNYL---PSIGE-TEGPEYESTWALGANLGINDLASIIEANHFADE 339
           +    + CP+ C +++YL   P  G  ++ P+YE    +G NLGI +   I+  ++  DE
Sbjct: 295 KYWADYGCPVNCMKISYLRYGPYKGSISDAPDYELQAYMGTNLGIFEPEKIVYLSYLVDE 354

Query: 340 YGMDTISLGGTLATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGD 399
            G+D I+ G  L  A ELY+RG++ +ED+G E      +G+ +     +H I ++EG G 
Sbjct: 355 LGLDGINTGNILGFAAELYQRGILTKEDLGFE----LNWGDEKAFAKLLHLIVEKEGIGK 410

Query: 400 ILAEGGYRLAERFNG------TEYFMGVKKQELPAYDPRGAEGH--GLGYATNNRGGCHI 451
           ILAEG YR A + +       T+Y + VK   + A+  R    +   + YA + +GG H 
Sbjct: 411 ILAEGTYRAALKISEIKGIDVTKYAVHVKGIAVGAHGIRSELDYTKDISYAVSVQGGDHT 470

Query: 452 KQYMISPEILGYPYKMDPHDISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDM 511
               +  +  GY  ++                  + A  D+A +C F T   G +   + 
Sbjct: 471 STAALPAK--GYTGEL------------------VEAFYDSAVICNFVT-KPGFEKIIEF 509

Query: 512 LNAALGWDFSTEDYL-KIGERIWNAERLFNLKAG----LDPLKEDTLPKRLLEEPMP 563
            NA  G++ + E +L +IG RI + +R+  L  G     DP K+D  P R   EP+P
Sbjct: 510 GNALSGFNITPEQWLNEIGLRIIHLQRILLLLGGPDVYWDPRKDDDNPPRFY-EPLP 565


>pir||C72785 probable aldehyde ferredoxin oxidoreductase APE0266 - Aeropyrum
           pernix (strain K1) >gi|5103660|dbj|BAA79181.1|
           (AP000058) 810aa long hypothetical aldehyde ferredoxin
           oxidoreductase [Aeropyrum pernix]
           Length = 810
           
 Score =  265 bits (669), Expect = 1e-69
 Identities = 193/610 (31%), Positives = 288/610 (46%), Gaps = 30/610 (4%)

Query: 3   GYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFA 62
           GY  ++  VNL    I+    + E  + + G R  G+  L   +     P      L+ A
Sbjct: 208 GYNCRVALVNLNKLRIEAVDLDPEALEYFPGGRALGVALLYNLLGRYDSP------LVLA 261

Query: 63  TGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPVYL 122
           T PL G+      R  ++ KSPLTG IA AN+GGY    LK AG+DA++I G++  P YL
Sbjct: 262 TSPLVGSGFVMANRLTIVFKSPLTGTIAWANTGGYVSPALKKAGFDALVIVGRSREPHYL 321

Query: 123 YIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNGHR 182
            I D +V++  A  +WG    E    L+   GD  V++ SIGPAGE  V +A V+N+  R
Sbjct: 322 LIEDGSVDLLPAEDLWGLDAVEVALMLRRRHGD--VRVLSIGPAGERGVSYATVINDTGR 379

Query: 183 AAG-RGGVGAVMGSKNLKAIVVRGH---KRVEVADKGKFMEVIREKIEKLKKDPVAG--- 235
           ++G R G GAVMG K LKAI ++      + + +D+   + + RE   ++    +     
Sbjct: 380 SSGVRHGAGAVMGLKRLKAIALKAKGVGSKAKPSDRSTLLRISREIASRIMASSLLNREK 439

Query: 236 GGLPKYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGC 295
           G L  YGT V +  +      P  N++  V E     SG  M+   L     C +CP+ C
Sbjct: 440 GLLAVYGTPVAMEALGPAEAVPHLNYRNPVLERWEALSGRIMSKTILAGRLTCSSCPVAC 499

Query: 296 GRVNYLPSIG-ETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATA 354
            R     S+   TEGP+Y    +LG+N G+  L  +      +   G+D I  G  LA  
Sbjct: 500 RRDTVGVSLSFRTEGPDYAQISSLGSNTGLISLEGVGYLTSLSYRLGLDPIEAGNILAMY 559

Query: 355 MELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNG 414
            E+ E      ED+G E      +G+ E +   +   A R G GD+LA G   +AE+   
Sbjct: 560 AEITE-----LEDLGREG---LVWGDLEAMEKLLVSTAYRRGVGDLLAGGARVVAEKLKR 611

Query: 415 TEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGG-CHIKQY---MISPEILGYPYKMDPH 470
            E    VK   +   DPR  +  G+  +    GG  HI  Y   + S + LG    +D  
Sbjct: 612 PEVRTDVKGVTIQNADPRVEKAWGVINSVEAFGGAAHIWVYGGIVASFKTLGVNVAVDWS 671

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYLKIGE 530
              +   K V   Q L A  D   +C F+ +  G  DY   L+A  G  +S E      E
Sbjct: 672 FNPETTAKAVYEHQLLVAAADTLQVCAFSQYAAGWRDYARALSAVTGVKWSVEKLRGAAE 731

Query: 531 RIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRLKEMLPRYYKLRGWTED 590
            + + ERL N + G++P  ED LP +  E P+P+G +KG    +   +  YY LR   ++
Sbjct: 732 TLLDLERLLNQQLGIEP-TEDVLPPKFTENPVPKGKHKGETADVSSHIEEYYSLRN-LKN 789

Query: 591 GRIPEEKLKE 600
           G+I  E+++E
Sbjct: 790 GKIGSERMRE 799


>pir||D71078 probable aldehyde:ferredoxin oxidoreductase - Pyrococcus horikoshii
           >gi|3257303|dbj|BAA29986.1| (AP000004) 622aa long
           hypothetical aldehyde:ferredoxin oxidoreductase
           [Pyrococcus horikoshii]
           Length = 622
           
 Score =  254 bits (641), Expect = 3e-66
 Identities = 210/628 (33%), Positives = 307/628 (48%), Gaps = 52/628 (8%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           MFGY GKIL ++L++  I      E++AK +LG RG         + P  + F PEN LI
Sbjct: 22  MFGYAGKILFIDLSNHIINTIP-TEKYAKDFLGGRGIATKIAYDIIPPDANAFDPENALI 80

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
             TGPLTG  AP+  R  V++ SPLT  +  +++GG FGA LKFAG+D I+I GK+  P 
Sbjct: 81  MMTGPLTGI-APSSSRIDVVSLSPLTNLLGGSSAGGDFGAALKFAGYDGIVITGKSKEPT 139

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
            + I D+ +   DA   W   V +T   +K+ +G + VQ+A IG AG N V+ A +  + 
Sbjct: 140 CIRIIDDEITFHDAEACWEYDVYDTVDCVKK-LGREDVQVACIGKAGANLVKTAGISFSK 198

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
              A RGG+GAVMGSKNLKAI V G K V++ D  K M+V  E   ++K+ P +      
Sbjct: 199 RNLAARGGLGAVMGSKNLKAIAVAGTKGVKIKDTNKLMKVNFEIQRRIKESP-SFKKYEN 257

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEA---MAAKYLIRNKPCFACPIGCGR 297
           +   + ++++     Y   +++   +E A E +  A      K  +R   CF+CP+ C  
Sbjct: 258 WHANISLSLLKARRPY-FGDYEEEFWEEAEEAAKNAKKFFEEKASLRPSSCFSCPLRCWA 316

Query: 298 VNYLPSIGETEGP--EYESTW-ALGANLGINDLASIIEANHFADEYGMDTISLGGTLATA 354
             ++   GE E P    + T+ A+   L I D     +        GMD +S    +A A
Sbjct: 317 --WVEYKGE-EAPMVACQGTFPAIIFILKIKDPELAWKVYLKLQREGMDIMSTVAIIAYA 373

Query: 355 MELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNG 414
             L   GL+K              G+ +VL+  I KI  REG G+ILAEG  R +E F G
Sbjct: 374 SRL---GLVK-------------LGSEDVLNL-IDKIINREGPGNILAEGIKRASEHF-G 415

Query: 415 TEYFMGVKKQELPAYDPRGAEGHGLGYATNNRG-------GCHIKQYMISP--------E 459
                     E  + D R   G  L  A +  G       G     Y   P        E
Sbjct: 416 VPAVYVKGGMESWSSDIRPFRGVALAGAVSESGSISRAIHGFPASSYYTKPEKAKKVAKE 475

Query: 460 ILGYPYKMDPHDISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWD 519
           I+G     +P +    K K+V  F++   + D+ G+C      +  + + +   AA G +
Sbjct: 476 IVGDESAAEPTNYKG-KAKLVAYFENEHIIADSLGVCDTPMLSVPLELWAESFTAATGIE 534

Query: 520 FSTEDYLKIGERIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVV---RLKE 576
            S E      E+I   ER+FN++ G++  ++DTL  RL E  +  GP KG  +   + +E
Sbjct: 535 MSPEKLHFYAEKIRTLERMFNVRRGVN-REKDTLSPRLFESVIHSGPWKGVKLDREKFEE 593

Query: 577 MLPRYYKLRGWTEDGRIPEEKLKELGLE 604
           M   YY LRGW E+G   EE LK+ GLE
Sbjct: 594 MKDEYYMLRGWNENGIPTEETLKKYGLE 621


>pir||C71078 probable aldehyde:ferredoxin oxidoreductase - Pyrococcus horikoshii
           >gi|3257302|dbj|BAA29985.1| (AP000004) 581aa long
           hypothetical aldehyde:ferredoxin oxidoreductase
           [Pyrococcus horikoshii]
           Length = 581
           
 Score =  250 bits (633), Expect = 2e-65
 Identities = 208/629 (33%), Positives = 303/629 (48%), Gaps = 78/629 (12%)

Query: 1   MFGYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLI 60
           MFGY GKIL ++L+ GT + E   E++AK +LG RG     L +  D           LI
Sbjct: 1   MFGYTGKILFIDLSSGTFRIEP-TEKYAKSFLGGRGIATRILYENPDA----------LI 49

Query: 61  FATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           F TGPLT +  P+G R  V+  SP+TG I  +++GG F + LKFAG+D ++I GKA+ PV
Sbjct: 50  FMTGPLT-SFVPSGSRMDVVAVSPVTGLIGGSSTGGEFPSALKFAGYDGLVITGKAEKPV 108

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           Y+ I ++ V I  A ++WG    ET   L    G   +++A IG AGEN V+FA ++ + 
Sbjct: 109 YIKIENDEVSIESAEELWGLNAFETIDYLTR--GHSDLKVACIGRAGENGVKFAGIVFSH 166

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLPK 240
              A RGG+GAVMG+K LKAI++ G K V   +  + M V     E++++  ++ G   +
Sbjct: 167 RNLASRGGLGAVMGAKKLKAILIHGTKGVNPYNPIELMSV----FEEIQESIISSGEFLR 222

Query: 241 YGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGE-AMAAK-----YLIRNKPCFACPIG 294
           +     VN +    +   R    G +E  +E++ E AM AK     + I    CF+CP+ 
Sbjct: 223 F-KDWHVNFVPT--ILKLRMPYFGDYEREWEKAEEAAMKAKEFFEEHTIGRASCFSCPLR 279

Query: 295 C-GRVNY----LPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGG 349
           C G VNY    LP I   +G    +T+     L I D              G+D +S   
Sbjct: 280 CWGLVNYDGETLP-INLCQGTFPAATFI----LKIEDPELAWRVYRKCQSEGLDMMSATA 334

Query: 350 TLATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKREGFGDILAEGGYRLA 409
            +A A  L   G +K              G+ E+L + I K+ KREG GDI AEG  R +
Sbjct: 335 VIAYASRL---GKVK-------------LGSEEILDF-IDKLVKREGDGDIFAEGIKRAS 377

Query: 410 ERFNGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQY--------------- 454
           E F G          E  + D R   G  L  A  + G  +   Y               
Sbjct: 378 EHF-GVPAVYVKGGMESWSSDIRPFVGSALIAAVADSGSVNRALYSFPEFYYYIKKEQAE 436

Query: 455 MISPEILGYPYKMDPHDISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNA 514
           M++ + +G      P   S  KVK+ +++++L  + D+ G+C+          +     A
Sbjct: 437 MVATKFVGDVEAAYPWSYSSSKVKLAVIWENLHIIADSLGVCVIALLTTPLKLWARAYKA 496

Query: 515 ALGWDFSTEDYLKIGERIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEGPNKGHVVRL 574
             G   + ED + I ERI   ER FNLK G   +K+D  P+   EEP  +        +L
Sbjct: 497 VTGNSITEEDLMTIAERIRTMERSFNLKYG--KVKDDLSPRLFSEEPRLDRE------KL 548

Query: 575 KEMLPRYYKLRGWTEDGRIPEEKLKELGL 603
           +EM   YY LRGW E+G    E LK+LGL
Sbjct: 549 EEMKRVYYSLRGWDENGVPTSETLKKLGL 577


>gi|11497697 aldehyde ferredoxin oxidoreductase (aor-2) [Archaeoglobus fulgidus]
           >gi|7450446|pir||E69259 aldehyde ferredoxin
           oxidoreductase (aor-2) homolog - Archaeoglobus fulgidus
           >gi|2650571|gb|AAB91151.1| (AE001101) aldehyde
           ferredoxin oxidoreductase (aor-2) [Archaeoglobus
           fulgidus]
           Length = 578
           
 Score =  237 bits (599), Expect = 2e-61
 Identities = 180/579 (31%), Positives = 276/579 (47%), Gaps = 48/579 (8%)

Query: 8   ILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFATGPLT 67
           +L ++L + T + E   E F +KWLG  G  +  + + MDPK DP SPEN ++FATGPLT
Sbjct: 5   VLVIDLNNYTYEVEHRPELF-EKWLGGTGVAVQLMREHMDPKADPLSPENVIVFATGPLT 63

Query: 68  GTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPVYLYIHDE 127
             + P   + + + KSPLTG +  +++GG     +  AG+ AI+I+G +  PVYL +   
Sbjct: 64  -PAYPLASKTVAMFKSPLTGNLGESHAGGRTAVSIAAAGYGAIVIKGASKKPVYLVVEPG 122

Query: 128 NVEIRDASKVWG--------KLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNN 179
            V  RD   +WG        ++++E E       G     +  IG AGE  VR++ V   
Sbjct: 123 KVHFRDGRVLWGIPDSLIVGRILAENES------GRGTRTMMRIGGAGERLVRYSCVTTE 176

Query: 180 GHRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKLKKDPVAGGGLP 239
            +R  GR G+GAV GSK LKA++VRG K+   AD  K+    RE  +++ +  +    + 
Sbjct: 177 TYRHFGRLGLGAVFGSKKLKALIVRGRKKYLPADGKKY----REVYDEIYRMAIESDAMK 232

Query: 240 KY---GTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAKYLIRNKPCFACPIGCG 296
           KY   GTA  V  +NE    PT+N +   FE A E SGEA+A   L R   C  CP+ C 
Sbjct: 233 KYHLLGTAANVIPLNELNALPTKNLKAARFEKAEEISGEALAEHNLGRRIACSHCPVACI 292

Query: 297 RVNYLPSIGETE---------GPEYESTWALGANLGINDLASIIEANHFADEYGMDTISL 347
            +  L    E E           +YE  ++LG+ LGI     ++   H  + YG+D +S 
Sbjct: 293 HLAALRLPYENEPYFFRTIMISYDYELIYSLGSMLGIGRRDDLLRLIHRVETYGLDAMST 352

Query: 348 GGTLATAMELYERGLIKQEDIGGENEPPFRFGNTEVLHYWIHKIAKR-EGFGDILAEGGY 406
           G  LA A E  ERG+I +     E      FG+ E     I  I ++   F   LA G  
Sbjct: 353 GVCLAWATEALERGIITER----ETLVKLNFGDVESYLKAIDYIYEQPTEFYKHLAMGVQ 408

Query: 407 RLAERFNGTEYFMGVKKQELPAYDPRGAEGHGLGYATNNRGGCHIKQYMISPEILGYPYK 466
             +E + G E+ +     E+P Y    A    LGY T  R   H+       +  GY   
Sbjct: 409 HASEIYGGREFALAFGGNEMPGYHTGYAA--VLGYLTGMRHS-HL-------DSAGYSLD 458

Query: 467 MDPHDISDEKVKMVILFQDLTALIDAAGLCLFTTFGLGADDYRDMLNAALGWDFSTEDYL 526
               D+S E+V   ++ ++    + ++ +  F   G+   +        LG+  S ++  
Sbjct: 459 QKVKDLSPEEVINRLIEEESWRQVLSSLVVCFFARGIYTPEVISRAFEPLGYSISPDELK 518

Query: 527 KIGERIWNAERLFNLKAGLDPLKEDTLPKRLLEEPMPEG 565
            +G  I+  +    +  G +P K+ ++PKR+ E P   G
Sbjct: 519 NLGTEIYREKARLKVAMGFNP-KKLSVPKRIFETPSLHG 556


>gb|AAB47949.1| (U68703) hypothetical protein [Escherichia coli]
           Length = 728
           
 Score =  187 bits (471), Expect = 2e-46
 Identities = 199/695 (28%), Positives = 292/695 (41%), Gaps = 103/695 (14%)

Query: 3   GYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFA 62
           G+ G ILRVNLT G I  E  ++   K ++G  GFG   +  E+ P   PF   NKL+FA
Sbjct: 32  GWTGNILRVNLTTGNITLEDSSK--FKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFA 89

Query: 63  TGPLTGTSAPTGGRYMVITKSPLT--GYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           TGPLTG+ AP   R  + + S  T    +  A+ GG+F A++KFAG+D IIIEGKA  PV
Sbjct: 90  TGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPV 149

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           +L I D+ V +  A  +WGK    T + +   +      +A+IG AGEN V  + ++N+ 
Sbjct: 150 WLKIKDDKVSLEKADFLWGKGTRATTEEIC-RLTSPETCVAAIGQAGENLVPLSGMLNSR 208

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKL------------ 228
           + + G  G GA+MGSKNLKAI V G K V +AD+ +   +    + +L            
Sbjct: 209 NHSGG-AGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPST 267

Query: 229 ------KKDPVAGGGLPK---YGTAVLVNIINEHGLYPTRNFQT-GVFEYAYEQSGEAMA 278
                   DP +     K   +G A    I  E G  P  N  T G   Y         A
Sbjct: 268 PQSWAEYSDPKSRWTARKGLFWGAAEGGPI--ETGEIPPGNQNTVGFRTYKSVFDLGPAA 325

Query: 279 AKYLIRNKPCFACPIGCGRVNYLPSIGETEGPEYESTWALGANL--------GIND---- 326
            KY ++   C +CPI C     +P + E   P       + AN         G  D    
Sbjct: 326 EKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCV-ANFVHTTIFPNGPKDFEDK 384

Query: 327 -----LASIIEANHFADEYGMDTISLGGTLATAMELYERGLIKQ----EDIGGENEPPFR 377
                + +++  N F D+YG+   + G         Y +G+ K+    E+          
Sbjct: 385 DDGRVIGNLVGLNLF-DDYGL-WCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLE 442

Query: 378 FGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMGVKKQELPAYDPRGAEGH 437
            G+   +  + +++A R G    LA+G Y +AER+N  E + G  K +L  + P G   H
Sbjct: 443 AGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKL--WSPFGYPVH 500

Query: 438 GLGYATNNRGG-------------CHIK----------QYMISPEILG----YPYKMDPH 470
               A+   G               HI           Q  ++ E+ G    Y    +  
Sbjct: 501 HANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYT 560

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLF----TTFGLGADDYRDML-------NAALGWD 519
            I+D K+K          L +A  LC +    T   L + +YR  L        A  G +
Sbjct: 561 PINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEE 620

Query: 520 FSTEDYLKIGERIWNAERLFNLK--AGLDPLKEDTLPKRLLEEPMP------EGPNKGHV 571
            + E      ERI+   R + +K     D   E  L    + +  P      EG +K   
Sbjct: 621 MTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDR 680

Query: 572 VRLKEMLPRYYKLRGWTEDGRIP-EEKLKELGLEE 605
             +   L  +YK  GW      P  E L+ LGLE+
Sbjct: 681 DDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLED 715


>sp|P76192|YDHV_ECOLI HYPOTHETICAL 77.9 KD PROTEIN IN RIBE-PYKF INTERGENIC REGION
           >gi|7466832|pir||A64925 probable oxidoreductase (EC
           1.-.-.-) ydhV - Escherichia coli
           >gi|1787962|gb|AAC74743.1| (AE000262) orf, hypothetical
           protein [Escherichia coli K12]
           Length = 700
           
 Score =  187 bits (471), Expect = 2e-46
 Identities = 199/695 (28%), Positives = 292/695 (41%), Gaps = 103/695 (14%)

Query: 3   GYWGKILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFA 62
           G+ G ILRVNLT G I  E  ++   K ++G  GFG   +  E+ P   PF   NKL+FA
Sbjct: 4   GWTGNILRVNLTTGNITLEDSSK--FKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFA 61

Query: 63  TGPLTGTSAPTGGRYMVITKSPLT--GYIAMANSGGYFGAELKFAGWDAIIIEGKADHPV 120
           TGPLTG+ AP   R  + + S  T    +  A+ GG+F A++KFAG+D IIIEGKA  PV
Sbjct: 62  TGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPV 121

Query: 121 YLYIHDENVEIRDASKVWGKLVSETEKALKEEVGDKHVQIASIGPAGENKVRFAAVMNNG 180
           +L I D+ V +  A  +WGK    T + +   +      +A+IG AGEN V  + ++N+ 
Sbjct: 122 WLKIKDDKVSLEKADFLWGKGTRATTEEIC-RLTSPETCVAAIGQAGENLVPLSGMLNSR 180

Query: 181 HRAAGRGGVGAVMGSKNLKAIVVRGHKRVEVADKGKFMEVIREKIEKL------------ 228
           + + G  G GA+MGSKNLKAI V G K V +AD+ +   +    + +L            
Sbjct: 181 NHSGG-AGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPST 239

Query: 229 ------KKDPVAGGGLPK---YGTAVLVNIINEHGLYPTRNFQT-GVFEYAYEQSGEAMA 278
                   DP +     K   +G A    I  E G  P  N  T G   Y         A
Sbjct: 240 PQSWAEYSDPKSRWTARKGLFWGAAEGGPI--ETGEIPPGNQNTVGFRTYKSVFDLGPAA 297

Query: 279 AKYLIRNKPCFACPIGCGRVNYLPSIGETEGPEYESTWALGANL--------GIND---- 326
            KY ++   C +CPI C     +P + E   P       + AN         G  D    
Sbjct: 298 EKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCV-ANFVHTTIFPNGPKDFEDK 356

Query: 327 -----LASIIEANHFADEYGMDTISLGGTLATAMELYERGLIKQ----EDIGGENEPPFR 377
                + +++  N F D+YG+   + G         Y +G+ K+    E+          
Sbjct: 357 DDGRVIGNLVGLNLF-DDYGL-WCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLE 414

Query: 378 FGNTEVLHYWIHKIAKREGFGDILAEGGYRLAERFNGTEYFMGVKKQELPAYDPRGAEGH 437
            G+   +  + +++A R G    LA+G Y +AER+N  E + G  K +L  + P G   H
Sbjct: 415 AGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKL--WSPFGYPVH 472

Query: 438 GLGYATNNRGG-------------CHIK----------QYMISPEILG----YPYKMDPH 470
               A+   G               HI           Q  ++ E+ G    Y    +  
Sbjct: 473 HANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYT 532

Query: 471 DISDEKVKMVILFQDLTALIDAAGLCLF----TTFGLGADDYRDML-------NAALGWD 519
            I+D K+K          L +A  LC +    T   L + +YR  L        A  G +
Sbjct: 533 PINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEE 592

Query: 520 FSTEDYLKIGERIWNAERLFNLK--AGLDPLKEDTLPKRLLEEPMP------EGPNKGHV 571
            + E      ERI+   R + +K     D   E  L    + +  P      EG +K   
Sbjct: 593 MTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDR 652

Query: 572 VRLKEMLPRYYKLRGWTEDGRIP-EEKLKELGLEE 605
             +   L  +YK  GW      P  E L+ LGLE+
Sbjct: 653 DDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLED 687


>pir||F75005 glyceraldehyde-3-phosphate: ferredoxin oxidoreductase. PAB1315 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458998|emb|CAB50484.1| (AJ248288)
           GLYCERALDEHYDE-3-PHOSPHATE: FERREDOXIN OXIDOREDUCTASE.
           [Pyrococcus abyssi]
           Length = 653
           
 Score =  104 bits (256), Expect = 4e-21
 Identities = 115/433 (26%), Positives = 176/433 (40%), Gaps = 85/433 (19%)

Query: 8   ILRVNLTDGTIKEETFNEEFAKKWLGTRGFGIYFLLKEMDPKVDPFSPENKLIFATGPLT 67
           +L++++    IK E F  E      G   +GIY   +    +++P+ P N +I   GP  
Sbjct: 5   VLKIDVEKKDIKLEDFEREDI---YGIIDYGIYVHTQLKTYELEPYDPRNVMIIGKGPFA 61

Query: 68  GTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWDAIIIEGKADHPVYLYIHDE 127
           G++ P   R +   +SPL G +  +  GG    + +  G D + I GKA+ PV + + ++
Sbjct: 62  GSALPGSHRLVFFYRSPLYGTLFPSTMGGA-SYQFQHVGVDFVEIHGKAEKPVVIIMKND 120

Query: 128 NVEIR---------DASKVW-GKLVSETEKALKEEVGDK--------HVQIASIGPAGEN 169
             EI             ++W G    E   AL + + D           +IA +GPA  N
Sbjct: 121 GEEISVNFYELEMDKLIEIWEGYKGEEGVYALTQYLLDNLSSEFEGMEFRIAVVGPAALN 180

Query: 170 K---VRFAAVMNNGHRAAG------RGGVGAVM-GSKNLKAIVVRGHKR----------- 208
                 F+  + NG RA G      RGG G+V+  + N+ AI   G KR           
Sbjct: 181 TNYGAVFSQALRNGKRAVGSEDWAARGGTGSVLLRAHNVVAIAFGGKKRKKKFPGEDITS 240

Query: 209 -------VEVADKGKFMEVIREKIEKLKKDP------VAGGGLPKYGTAVLVNIINEHGL 255
                  VE   K  + EV+     K + +P        GG  P  G   LV I+N    
Sbjct: 241 MSTAKRIVEGVHKKPYNEVVTHATTKYRFNPKLNTGGTFGGNYPAEGE--LVPILNWQMP 298

Query: 256 YPTRNFQTGVFE----YAYEQSGEAMAA--KYLIRNKPCFACPIGCGR------VNYLPS 303
           Y  +  +  + E    Y +E   E      K+    +PC   P  C +      V Y P 
Sbjct: 299 YIPKEERIKIHELIMKYYWEPFNEESIKPKKWTTCGEPC---PAVCKKHRRGHHVEYEPY 355

Query: 304 IGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDTISLGGTLATAMELYERGLI 363
             E  GP   S +   +++ +          H  D  G D I  GGT A  +EL  RGL+
Sbjct: 356 --EANGPLSGSIYLYASDISV----------HAVDSMGFDAIEFGGTAAWLLELVYRGLL 403

Query: 364 KQEDIGGENEPPF 376
           K E++G  ++P F
Sbjct: 404 KPEEVGISDKPRF 416


>gb|AAC70892.1| (U74298) glyceraldehyde-3-phosphate: ferredoxin oxidoreductase
           [Pyrococcus furiosus]
           Length = 653
           
 Score = 95.6 bits (234), Expect = 1e-18
 Identities = 106/392 (27%), Positives = 161/392 (41%), Gaps = 82/392 (20%)

Query: 49  KVDPFSPENKLIFATGPLTGTSAPTGGRYMVITKSPLTGYIAMANSGGYFGAELKFAGWD 108
           +VDP+ P N +IF  GP  G+  P   R +   +SPL G +  +  GG  G + K  G D
Sbjct: 43  EVDPYDPRNIVIFGIGPFAGSVLPGSHRLVFFFRSPLYGGLFPSTMGGA-GYQFKNVGVD 101

Query: 109 AIIIEGKADHPVYLYIHDEN---------VEIRDASKVWGKLVSETEK-ALKEEVGDK-- 156
            + I GKA+ P  + + ++          +E+     VW +   E    AL + + D   
Sbjct: 102 FVEIHGKAEKPTVIILKNDGEKLSVDFYEIELEKLLDVWKEYKGEEGVYALTQYLLDNLA 161

Query: 157 ------HVQIASIGPAGENK---VRFAAVMNNGHRAAG------RGGVGAVM-GSKNLKA 200
                   +IA +GPA  N      F+  + NG RA G      RGG G+V+  + N+ A
Sbjct: 162 SVFEGMEFRIAVVGPAALNTNMGAIFSQALRNGKRAVGSEDWAARGGPGSVLLRAHNVVA 221

Query: 201 IVVRGHKR------------------VEVADKGKFMEVIREKIEKLKKDP------VAGG 236
           I   G KR                  VE   K    +VI E   K + +P        GG
Sbjct: 222 IAFGGKKRKREFPGEDISDVKVAKRVVEGIHKKAQRDVINESTVKYRYNPKLNTGGTFGG 281

Query: 237 GLPKYGTAVLVNIINEHGLYPTRNFQTGVFE----YAYEQ-SGEAMAAK-YLIRNKPCFA 290
             P  G   LV ++N    Y  +  +  + E    Y +E  + E++  K +    +PC  
Sbjct: 282 NYPAEGD--LVPVLNWQMPYIPKEERIKIHELIMKYYWEPFNKESIQPKNWTTCGEPC-- 337

Query: 291 CPIGCGR------VNYLPSIGETEGPEYESTWALGANLGINDLASIIEANHFADEYGMDT 344
            P+ C +      V Y P   E  GP   S +   +++ +          H  D  G D 
Sbjct: 338 -PVVCKKHRKGHHVEYEPY--EANGPLSGSIYLYASDISV----------HAVDAMGFDA 384

Query: 345 ISLGGTLATAMELYERGLIKQEDIGGENEPPF 376
           I  GGT A  +EL  +GL+K  ++G  + P F
Sbjct: 385 IEFGGTAAWVLELVHKGLLKPAEVGISDVPEF 416


>pir||B71157 hypothetical protein PH0457 - Pyrococcus horikoshii
           >gi|3256860|dbj|BAA29543.1| (AP000002) 653aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 653
           
 Score = 92.1 bits (225), Expect = 2e-17
 Identities = 102/397 (25%), Positives = 159/397 (39%), Gaps = 60/397 (15%)

Query: 33  GTRGFGIYFLLKEMDPKVDPFSPENKLIFATGPLTGTSAPTGGRYMVITKSPLTGYIAMA 92
           G   +GI+   K    +++P+ P N +I   GP  G++ P   R +   +SPL G +  +
Sbjct: 27  GIIDYGIHIHNKLKTYEIEPYDPRNVVIIGKGPFAGSALPGSHRLVFFYRSPLYGTLFPS 86

Query: 93  NSGGYFGAELKFAGWDAIIIEGKADHPVYLYIHDEN---------VEIRDASKVW-GKLV 142
             GG    + +  G D + + G+++ P  + + ++          +E+    ++W G   
Sbjct: 87  TMGGA-SYQFQHVGVDFVEVHGRSEKPTVVIMKNDGENVSVSFYEIELEKVIEIWKGYKG 145

Query: 143 SETEKALKEEVGDK--------HVQIASIGPAGENK---VRFAAVMNNGHRAAG------ 185
            E   AL + + D           +IA +GPA  N      F+  + NG RA G      
Sbjct: 146 EEGVYALTQYLLDNLSPEFEGMEFRIAVVGPASLNTNYGAVFSQALRNGKRAIGSEDWAA 205

Query: 186 RGGVGAVM-GSKNLKAIVVRGHKR------------------VEVADKGKFMEVIREKIE 226
           RGG G+V+  + N+  I   G KR                  VE   K  + +V+     
Sbjct: 206 RGGTGSVLLRAHNVVGIAFGGKKRKKKFPGEDITNMSTAKRIVEGVHKKPYNDVVTSATT 265

Query: 227 KLKKDP------VAGGGLPKYGTAVLVNIINEHGLYPTRNFQTGVFEYAYEQSGEAMAAK 280
           K + +P        GG  P  G   LV I+N    Y  +  +  + E   +   E    K
Sbjct: 266 KYRYNPKLRTGGTFGGNYPAEGE--LVPILNWQMPYIPKEDRIKLHELIMKYYWEPFN-K 322

Query: 281 YLIRNKPCFACPIGCGRVNYLPSIGE-TEGPEYESTWALGANLGINDLASIIEANHFADE 339
             I  K    C   C  V      G   E   YE+   L  ++ +   AS I   H  D 
Sbjct: 323 ESIEPKNWTTCGEPCPAVCKKHRRGHHVEYEPYEANGPLSGSISL--YASDISV-HAVDA 379

Query: 340 YGMDTISLGGTLATAMELYERGLIKQEDIGGENEPPF 376
            G D I  GGT A   EL  RGL+K E++G  ++P F
Sbjct: 380 MGFDAIEFGGTAAWIFELIHRGLLKPEEVGISDKPRF 416


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.318    0.140    0.424 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252153385
Number of Sequences: 2977
Number of extensions: 11973863
Number of successful extensions: 26755
Number of sequences better than 1.0e-10: 27
Number of HSP's better than  0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 26589
Number of HSP's gapped (non-prelim): 30
length of query: 607
length of database: 189,106,746
effective HSP length: 54
effective length of query: 553
effective length of database: 156,788,448
effective search space: 86704011744
effective search space used: 86704011744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 168 (69.9 bits)