BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0651 (pad1) DE:phenylacrylic acid decarboxylase
(181 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75071 phenylacrylic acid decarboxylase PAB0651 - Pyrococcu... 362 1e-99
pir||A71094 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 312 1e-84
sp|Q57566|Y102_METJA HYPOTHETICAL PROTEIN MJ0102 >gi|2129181|pir... 198 3e-50
pir||G69062 phenylacrylic acid decarboxylase - Methanobacterium ... 195 3e-49
pir||G70347 phenylacrylic acid decarboxylase - Aquifex aeolicus ... 183 8e-46
emb|CAC12227.1| (AL445066) probable phenylacrylic acid decarboxy... 171 4e-42
dbj|BAB05370.1| (AP001512) 3-octaprenyl-4-hydroxybenzoate carbox... 170 1e-41
gb|AAK40762.1| 3-octaprenyl-4-hydroxybenzoate decarboxylase [Sul... 169 2e-41
emb|CAB46087.1| (AJ243426) DNA polymerase sliding clamps [Sulfol... 169 2e-41
emb|CAC12692.1| (AJ272115) hypothetical protein [Thauera aromatica] 168 3e-41
gi|6320746 Phenylacrylic acid decarboxylase; Pad1p [Saccharomyce... 166 1e-40
gb|AAA20484.1| (L09263) phenylacrylic acid decarboxylase [Saccha... 166 2e-40
pir||D71658 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (ubiX) ... 164 6e-40
gb|AAB41845.1| (U61168) 3-octaprenyl-4-hydroxybenzoate carboxy-l... 163 1e-39
pir||G69761 phenylacrylic acid decarboxylase homolog yclB - Baci... 162 2e-39
pir||H83144 probable aromatic acid decarboxylase PA4019 [importe... 162 3e-39
gi|11498813 phenylacrylic acid decarboxylase (pad1) [Archaeoglob... 157 6e-38
pir||G82063 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VC2541 ... 156 2e-37
pir||B81023 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NMB1945... 152 3e-36
gb|AAD28781.1|AF134589_1 (AF134589) VdcB [Streptomyces sp. D7] 151 6e-36
pir||H81968 probable decarboxylase (EC 4.1.1.-) NMA0507 [importe... 150 1e-35
gi|10956998 decarboxylase [Sphingomonas aromaticivorans] >gi|112... 150 1e-35
pir||H72099 phenylacrylate decarboxylase - Chlamydophila pneumon... 148 5e-35
sp|P09550|UBIX_ECOLI 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYAS... 146 1e-34
gb|AAG14979.1|AF242209_4 (AF242209) phenylacrylic acid decarboxy... 144 6e-34
pir||T44998 phenylacrylic acid decarboxylase-like protein [impor... 144 8e-34
gb|AAG14986.1|AF242210_5 (AF242210) phenylacrylic acid decarboxy... 142 2e-33
gb|AAF73564.1| (AE002318) phenylacrylic acid decarboxylase [Chla... 139 1e-32
pir||C71543 probable phenylacrylate decarboxylase - Chlamydia tr... 139 2e-32
gb|AAG14973.1|AF242208_6 (AF242208) phenylacrylic acid decarboxy... 139 3e-32
pir||C75254 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - Deino... 136 2e-31
pir||C72545 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 136 2e-31
gb|AAA23970.1| (M68935) dedF [Escherichia coli] 132 3e-30
pir||S74606 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubiX - ... 129 2e-29
pir||D64704 phenylacrylic acid decarboxylase - Helicobacter pylo... 129 3e-29
pir||D71814 octaprenyl-4-hydroxybenzoate carboxy-lyase - Helicob... 128 5e-29
emb|CAB92113.1| (AL356334) putative octaprenyl carboxylase [Stre... 125 3e-28
pir||H81347 probable decarboxylase Cj0768c [imported] - Campylob... 121 6e-27
>pir||G75071 phenylacrylic acid decarboxylase PAB0651 - Pyrococcus abyssi
(strain Orsay) >gi|5458388|emb|CAB49876.1| (AJ248286)
phenylacrylic acid decarboxylase [Pyrococcus abyssi]
Length = 181
Score = 362 bits (920), Expect = 1e-99
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELF 60
MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELF
Sbjct: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELF 60
Query: 61 APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIRETPLNL 120
APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIRETPLNL
Sbjct: 61 APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIRETPLNL 120
Query: 121 IHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKRWGMDYN 180
IHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKRWGMDYN
Sbjct: 121 IHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKRWGMDYN 180
Query: 181 D 181
D
Sbjct: 181 D 181
>pir||A71094 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - Pyrococcus
horikoshii >gi|3257428|dbj|BAA30111.1| (AP000004) 181aa
long hypothetical 3-octaprenyl-4-hydroxybenzoate
carboxy-lyase [Pyrococcus horikoshii]
Length = 181
Score = 312 bits (792), Expect = 1e-84
Identities = 151/181 (83%), Positives = 167/181 (91%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELF 60
M+++VAITGASG+IYGIKLYE L+ LGH+VILLASKTGIKVAKYETG+E+ PDF ED+LF
Sbjct: 1 MKIIVAITGASGSIYGIKLYEILKKLGHDVILLASKTGIKVAKYETGMEITPDFDEDDLF 60
Query: 61 APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIRETPLNL 120
APIASGSYPFDAMVIAPCSMKTL AIANGFS NLITRAADV LKERRKL+LLIRETPLNL
Sbjct: 61 APIASGSYPFDAMVIAPCSMKTLGAIANGFSYNLITRAADVTLKERRKLILLIRETPLNL 120
Query: 121 IHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKRWGMDYN 180
+H+QNMLKI QAGGIIMPASPAFY KP TIDDM+ FIIGKILD+LGI HNLY+RWGM +
Sbjct: 121 VHVQNMLKIIQAGGIIMPASPAFYTKPKTIDDMVNFIIGKILDLLGITHNLYRRWGMRED 180
Query: 181 D 181
D
Sbjct: 181 D 181
>sp|Q57566|Y102_METJA HYPOTHETICAL PROTEIN MJ0102 >gi|2129181|pir||F64312 phenylacrylic
acid decarboxylase homolog - Methanococcus jannaschii
>gi|1590879|gb|AAB98082.1| (U67467) Phenylacrylic acid
decarboxylase [Methanococcus jannaschii]
Length = 184
Score = 198 bits (499), Expect = 3e-50
Identities = 97/183 (53%), Positives = 135/183 (73%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKP------DF 54
M+++V ITGASG IY +L E L+D EV L+ S + K+ K E I+ K D+
Sbjct: 1 MKIIVCITGASGVIYAKRLLEVLKDRA-EVNLIISNSAKKIIKEELDIDWKEIKKLATDY 59
Query: 55 SE-DELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
E D+ F+P+ASGS FDA+V+ PCSMKTLSAIANG+S NLI R D+ALKERRKL+++
Sbjct: 60 YENDDFFSPLASGSNKFDAVVVVPCSMKTLSAIANGYSANLIVRVCDIALKERRKLIIMP 119
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYK 173
RE P N IH++NMLK++ G I+MP PAFY+KP ++D+I F++G++LD+LGI+++L+K
Sbjct: 120 REMPFNSIHLENMLKLSNLGAIVMPPIPAFYNKPKNVNDIINFVVGRVLDILGIDNSLFK 179
Query: 174 RWG 176
RWG
Sbjct: 180 RWG 182
>pir||G69062 phenylacrylic acid decarboxylase - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621188|gb|AAB84653.1| (AE000803) phenylacrylic acid
decarboxylase [Methanobacterium thermoautotrophicum]
Length = 191
Score = 195 bits (490), Expect = 3e-49
Identities = 95/180 (52%), Positives = 129/180 (70%), Gaps = 7/180 (3%)
Query: 3 VVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIE-------VKPDFS 55
+++A+TGASG IYG ++ + LR G + L+ + T ++ +YE GIE F
Sbjct: 7 IILAMTGASGVIYGERILKALRGAGVRIGLMITDTAREIIRYELGIEPGALEELADECFD 66
Query: 56 EDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIRE 115
+ I SGS PF AMVIAPC+MKTLSAIANG++ N +TRAADV LKERR LVL+ RE
Sbjct: 67 ASDFTTSINSGSSPFRAMVIAPCTMKTLSAIANGYAENSLTRAADVCLKERRDLVLVPRE 126
Query: 116 TPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKRW 175
TPL +H++NML++++ GGII+PA P FYHKP +I+DM FI GK+LDVLGI ++L++RW
Sbjct: 127 TPLRSVHLENMLRVSREGGIILPAMPGFYHKPASIEDMADFIAGKVLDVLGIENDLFRRW 186
>pir||G70347 phenylacrylic acid decarboxylase - Aquifex aeolicus
>gi|2983173|gb|AAC06774.1| (AE000694) phenylacrylic acid
decarboxylase [Aquifex aeolicus]
Length = 189
Score = 183 bits (461), Expect = 8e-46
Identities = 95/185 (51%), Positives = 124/185 (66%), Gaps = 11/185 (5%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYE---------TGIEVKP 52
++ + ITGASG IYGIKL + L +L V L+ S+ V K E G++
Sbjct: 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKNVR 62
Query: 53 DFSEDELFAPIASGS--YPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLV 110
E++ +P+ASGS + + + PCS TLS IANG + NLI R +VALKER LV
Sbjct: 63 IHEENDFTSPLASGSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLV 122
Query: 111 LLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHN 170
LL+RE P N IH++NMLKIT+ GG+++PASPAFYHKP +IDDMI F++GK+LDVL I HN
Sbjct: 123 LLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQSIDDMINFVVGKLLDVLRIEHN 182
Query: 171 LYKRW 175
LYKRW
Sbjct: 183 LYKRW 187
>emb|CAC12227.1| (AL445066) probable phenylacrylic acid decarboxylase [Thermoplasma
acidophilum]
Length = 180
Score = 171 bits (430), Expect = 4e-42
Identities = 84/182 (46%), Positives = 128/182 (70%), Gaps = 9/182 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVK-------PD 53
MR+VV I+GASG Y ++ E LR GH+ L+ S+ KV +YE+ ++ +
Sbjct: 1 MRIVVGISGASGIPYAVRFLENLR--GHDTYLVISEAAKKVIQYESDENIEYIRSLASHN 58
Query: 54 FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
+ +D+ API+SGS+ FD+MVI PCS+ T+S IA G S+ LITRAA V+LKERR+L+++
Sbjct: 59 YEDDDFSAPISSGSFLFDSMVIVPCSITTISKIAAGISDTLITRAAAVSLKERRRLIVVP 118
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYK 173
RE PL+ I ++NM +++ G I+ PASP FY KP ++DDM+ F++ +ILD++G+ ++L K
Sbjct: 119 REMPLSTIDLKNMTYLSENGVIVAPASPGFYTKPKSVDDMVAFVVSRILDLVGVGNDLIK 178
Query: 174 RW 175
RW
Sbjct: 179 RW 180
>dbj|BAB05370.1| (AP001512) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Bacillus
halodurans]
Length = 206
Score = 170 bits (426), Expect = 1e-41
Identities = 92/189 (48%), Positives = 121/189 (63%), Gaps = 17/189 (8%)
Query: 5 VAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKP-DFSEDELFA-- 61
V ITGASG YGI+L + ++ G++V L+ ++ G +V + E I+ DELFA
Sbjct: 10 VGITGASGAQYGIRLVQEMKKKGYKVHLVITEAGWQVFREELLIQTDDRKMVIDELFAAG 69
Query: 62 --------------PIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERR 107
PIASGSY M+I PCSM TLS IA G S NL+ R ADV LKE+R
Sbjct: 70 DGEVSFHQLDDYTAPIASGSYQNRGMIIIPCSMGTLSGIAQGASGNLLERTADVMLKEKR 129
Query: 108 KLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGI 167
+LV++ RETPLN IH++NMLK+++ G I+PA P FY P T+DD+I F++GK LD LGI
Sbjct: 130 RLVIVPRETPLNQIHLENMLKLSKMGVTILPAMPGFYQLPKTMDDLIDFVVGKALDQLGI 189
Query: 168 NHNLYKRWG 176
H L+ RWG
Sbjct: 190 EHELFTRWG 198
>gb|AAK40762.1| 3-octaprenyl-4-hydroxybenzoate decarboxylase [Sulfolobus
solfataricus]
Length = 209
Score = 169 bits (423), Expect = 2e-41
Identities = 85/184 (46%), Positives = 127/184 (68%), Gaps = 10/184 (5%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPD-------- 53
R+++ I+GASGTIYGI+ + L +LG+E+ ++ SK+ KVA+ E GI + +
Sbjct: 24 RIIIGISGASGTIYGIRTVQFLNELGYEIHIIISKSAEKVAQKELGINLINELKKYSSYI 83
Query: 54 FSEDELFAPIASGSYPFDA--MVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVL 111
+++ ++ A +S S+ + M+I PCS+KTL+ IANG +NL++R A ++ ++LVL
Sbjct: 84 YNQSQIEASPSSSSFSITSKGMIIIPCSIKTLAEIANGIGSNLLSRTALNFIRTNKRLVL 143
Query: 112 LIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNL 171
+IRETPL I ++N LK+ + G IMPASPAFY P IDDMI FI+GK LD+LGI H++
Sbjct: 144 VIRETPLGAIELENALKLARLGVYIMPASPAFYILPKNIDDMINFIVGKALDLLGIKHDI 203
Query: 172 YKRW 175
YKRW
Sbjct: 204 YKRW 207
>emb|CAB46087.1| (AJ243426) DNA polymerase sliding clamps [Sulfolobus solfataricus]
Length = 209
Score = 169 bits (423), Expect = 2e-41
Identities = 85/184 (46%), Positives = 127/184 (68%), Gaps = 10/184 (5%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPD-------- 53
R+++ I+GASGTIYGI+ + L +LG+E+ ++ SK+ KVA+ E GI + +
Sbjct: 24 RIIIGISGASGTIYGIRTVQFLNELGYEIHIIISKSAEKVAQKELGINLINELKKYSSYI 83
Query: 54 FSEDELFAPIASGSYPFDA--MVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVL 111
+++ ++ A +S S+ + M+I PCS+KTL+ IANG +NL++R A ++ ++LVL
Sbjct: 84 YNQSQIEASPSSSSFSITSKGMIIIPCSIKTLAEIANGIGSNLLSRTALNFIRTNKRLVL 143
Query: 112 LIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNL 171
+IRETPL I ++N LK+ + G IMPASPAFY P IDDMI FI+GK LD+LGI H++
Sbjct: 144 VIRETPLGAIELENALKLARLGVYIMPASPAFYILPKNIDDMINFIVGKALDLLGIKHDI 203
Query: 172 YKRW 175
YKRW
Sbjct: 204 YKRW 207
>emb|CAC12692.1| (AJ272115) hypothetical protein [Thauera aromatica]
Length = 194
Score = 168 bits (422), Expect = 3e-41
Identities = 85/182 (46%), Positives = 124/182 (67%), Gaps = 7/182 (3%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKP-------D 53
MR+VV ++GASG IYGI++ E L+ +G E L+ S + + YET +
Sbjct: 1 MRIVVGMSGASGAIYGIRILEALQRIGVETDLVMSDSAKRTIAYETDYSISDLKGLATCV 60
Query: 54 FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
+++ A IASGS+ M+IAPCS+KTLSA+AN F+ NL+ RAADVALKERRKLVL++
Sbjct: 61 HDINDVGASIASGSFRHAGMIIAPCSIKTLSAVANSFNTNLLIRAADVALKERRKLVLML 120
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYK 173
RETPL+L H++ M + T+ G +++P PAFYH+P T+DD+I + K+LD ++ +L+
Sbjct: 121 RETPLHLGHLRLMTQATENGAVLLPPLPAFYHRPKTLDDIINQSVTKVLDQFDLDVDLFG 180
Query: 174 RW 175
RW
Sbjct: 181 RW 182
>gi|6320746 Phenylacrylic acid decarboxylase; Pad1p [Saccharomyces cerevisiae]
>gi|1709555|sp|P33751|PAD1_YEAST PHENYLACRYLIC ACID
DECARBOXYLASE (PAD) >gi|2132387|pir||S62017
phenylacrylic acid decarboxylase - yeast (Saccharomyces
cerevisiae) >gi|1165293|gb|AAB64980.1| (U43834) Pad1p:
phenylacrylic acid decarboxylase; YDR538W [Saccharomyces
cerevisiae]
Length = 242
Score = 166 bits (417), Expect = 1e-40
Identities = 85/181 (46%), Positives = 123/181 (66%), Gaps = 7/181 (3%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIE-------VKPDF 54
R+VVAITGA+G GI+L + L++L E L+ SK G KYET E +
Sbjct: 56 RIVVAITGATGVALGIRLLQVLKELSVETHLVISKWGAATMKYETDWEPHDVAALATKTY 115
Query: 55 SEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIR 114
S ++ A I+SGS+ D M++ PCSMK+L+AI GF+ +LITRAADV++KE RKL+L+ R
Sbjct: 116 SVRDVSACISSGSFQHDGMIVVPCSMKSLAAIRIGFTEDLITRAADVSIKENRKLLLVTR 175
Query: 115 ETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKR 174
ETPL+ IH++NML + +AG II P PAFY +P ++ D+++ +G+ILD GI+ + + R
Sbjct: 176 ETPLSSIHLENMLSLCRAGVIIFPPVPAFYTRPKSLHDLLEQSVGRILDCFGIHADTFPR 235
Query: 175 W 175
W
Sbjct: 236 W 236
>gb|AAA20484.1| (L09263) phenylacrylic acid decarboxylase [Saccharomyces
cerevisiae]
Length = 242
Score = 166 bits (416), Expect = 2e-40
Identities = 85/181 (46%), Positives = 123/181 (66%), Gaps = 7/181 (3%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIE-------VKPDF 54
R+VVAITGA+G GI+L + L++L E L+ SK G KYET E +
Sbjct: 56 RIVVAITGATGVALGIRLLQLLKELSVETHLVISKWGAATMKYETDWEPHDVAALATKTY 115
Query: 55 SEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIR 114
S ++ A I+SGS+ D M++ PCSMK+L+AI GF+ +LITRAADV++KE RKL+L+ R
Sbjct: 116 SVRDVSACISSGSFQHDGMIVVPCSMKSLAAIRIGFTEDLITRAADVSIKENRKLLLVTR 175
Query: 115 ETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKR 174
ETPL+ IH++NML + +AG II P PAFY +P ++ D+++ +G+ILD GI+ + + R
Sbjct: 176 ETPLSSIHLENMLSLCRAGVIIFPPVPAFYTRPKSLHDLLEQSVGRILDCFGIHADTFPR 235
Query: 175 W 175
W
Sbjct: 236 W 236
>pir||D71658 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (ubiX) RP541 -
Rickettsia prowazekii >gi|3861090|emb|CAA14990.1|
(AJ235272) 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE
(ubiX) [Rickettsia prowazekii]
Length = 189
Score = 164 bits (411), Expect = 6e-40
Identities = 85/184 (46%), Positives = 120/184 (65%), Gaps = 7/184 (3%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPD-------F 54
++++AI+GASG IYGI+L + L++ E L+ S K+ET ++ +
Sbjct: 6 KIIIAISGASGAIYGIRLLKVLKEQNIETHLVISDGAALTIKFETKYSIQEVKFLANYCY 65
Query: 55 SEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIR 114
E L A I+SGS+ M+IAPCSMKTL++IA+ ++LI+RAA V LKERRKL+L+ R
Sbjct: 66 DEKNLGAAISSGSFKTAGMIIAPCSMKTLASIAHSMEDSLISRAAGVVLKERRKLILMTR 125
Query: 115 ETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKR 174
ETPL++ H++NMLK+ GGII P PAFY+KP I+D+I I ++LD I NL KR
Sbjct: 126 ETPLHIGHLENMLKVAHYGGIIAPPIPAFYNKPTRINDIIDHSITRVLDFFDIETNLIKR 185
Query: 175 WGMD 178
W D
Sbjct: 186 WSSD 189
>gb|AAB41845.1| (U61168) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Bacillus
firmus]
Length = 200
Score = 163 bits (408), Expect = 1e-39
Identities = 89/191 (46%), Positives = 121/191 (62%), Gaps = 17/191 (8%)
Query: 3 VVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSE-DELF- 60
+ V ITGASG +YG++L + L ++V L+ ++ +V K E ++ ELF
Sbjct: 9 MTVGITGASGGMYGVRLTQELLRQEYKVHLVLTEAAWQVFKEELLLDTTDRQKVIHELFG 68
Query: 61 ---------------APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKE 105
APIASGSY MVI PCSM TLS +A+G S NL+ R ADV LKE
Sbjct: 69 DLPGELHTHDLHDYAAPIASGSYRSAGMVIIPCSMGTLSGMAHGASGNLLERTADVMLKE 128
Query: 106 RRKLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVL 165
+RKLV++ RETPL+ IH++NMLK+++ G I+PA P +YH P TIDD+I F++GK LD L
Sbjct: 129 KRKLVIVPRETPLHDIHLENMLKLSKMGATILPAMPGYYHLPKTIDDLINFLVGKALDSL 188
Query: 166 GINHNLYKRWG 176
G+ H L+ RWG
Sbjct: 189 GVEHTLFTRWG 199
>pir||G69761 phenylacrylic acid decarboxylase homolog yclB - Bacillus subtilis
>gi|1805434|dbj|BAA08996.1| (D50453) homologue of
phenylacrylic acid decarboxylase PAD1 of yeast [Bacillus
subtilis] >gi|2632649|emb|CAB12157.1| (Z99105) similar
to phenylacrylic acid decarboxylase [Bacillus subtilis]
>gi|2632664|emb|CAB12171.1| (Z99106) similar to
phenylacrylic acid decarboxylase [Bacillus subtilis]
Length = 204
Score = 162 bits (407), Expect = 2e-39
Identities = 82/182 (45%), Positives = 123/182 (67%), Gaps = 7/182 (3%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKP-------D 53
+++VV +TGA+G I+G++L + L+ G E L+ S K+ETG ++
Sbjct: 13 VKLVVGMTGATGAIFGVRLLQWLKAAGVETHLVVSPWANVTIKHETGYTLQEVEQLATYT 72
Query: 54 FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
+S + A I+SGS+ D M++APCSMK+L++I G ++NL+TRAADV LKER+KLVLL
Sbjct: 73 YSHKDQAAAISSGSFDTDGMIVAPCSMKSLASIRTGMADNLLTRAADVMLKERKKLVLLT 132
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYK 173
RETPLN IH++NML +T+ G II+P PAFY++P ++++M+ I+ + LD GI K
Sbjct: 133 RETPLNQIHLENMLALTKMGTIILPPMPAFYNRPRSLEEMVDHIVFRTLDQFGIRLPEAK 192
Query: 174 RW 175
RW
Sbjct: 193 RW 194
>pir||H83144 probable aromatic acid decarboxylase PA4019 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9950212|gb|AAG07406.1|AE004818_12 (AE004818)
probable aromatic acid decarboxylase [Pseudomonas
aeruginosa]
Length = 209
Score = 162 bits (405), Expect = 3e-39
Identities = 87/196 (44%), Positives = 121/196 (61%), Gaps = 21/196 (10%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEV--KPD------ 53
R+ +A+TGASG YG++L + L EV L SK V ET + + KP
Sbjct: 6 RITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFL 65
Query: 54 -------------FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAAD 100
F +++ AP ASGS +AMVI PCS TLSA+A G NNLI RAAD
Sbjct: 66 TEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAAD 125
Query: 101 VALKERRKLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGK 160
VALKERR LVL+ RE P + IH++NMLK++ G +I+PA+P FYH+P +++D++ F++ +
Sbjct: 126 VALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVAR 185
Query: 161 ILDVLGINHNLYKRWG 176
IL+ LGI ++ RWG
Sbjct: 186 ILNTLGIPQDMLPRWG 201
>gi|11498813 phenylacrylic acid decarboxylase (pad1) [Archaeoglobus fulgidus]
>gi|7443270|pir||E69401 phenylacrylic acid decarboxylase
(pad1) homolog - Archaeoglobus fulgidus
>gi|2649368|gb|AAB90031.1| (AE001020) phenylacrylic acid
decarboxylase (pad1) [Archaeoglobus fulgidus]
Length = 182
Score = 157 bits (394), Expect = 6e-38
Identities = 82/183 (44%), Positives = 118/183 (63%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIE-------VKPD 53
MR VVA+TGASG I GI+L E L +LG EV +AS+ K ET +
Sbjct: 1 MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKY 60
Query: 54 FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
+ EDE+ AP ASGS+ D M + PCS+KT S+IA G ++NLI RAADV LKE+R+LVL I
Sbjct: 61 YDEDEIAAPFASGSFRHDGMAVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAI 120
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYK 173
RE PL+ H++ + ++ + G +I P +FY +P ++DD+I+ + +I + LG+ + Y+
Sbjct: 121 REAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDLIEHTVSRIAEQLGVEVD-YR 179
Query: 174 RWG 176
RWG
Sbjct: 180 RWG 182
>pir||G82063 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VC2541 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657125|gb|AAF95682.1| (AE004323)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Vibrio
cholerae]
Length = 211
Score = 156 bits (390), Expect = 2e-37
Identities = 82/197 (41%), Positives = 123/197 (61%), Gaps = 21/197 (10%)
Query: 3 VVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEV--KPDFSE---- 56
+ +A TGASG YG++L + L ++V LL S V E G+++ P+ ++
Sbjct: 9 ITLAWTGASGAPYGLRLLQCLLAADYQVYLLISSAARVVLATEHGLKLPANPEAAQAALV 68
Query: 57 ---------------DELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADV 101
++ F+P+ASGS MV+ PCS +++AIA+G S+NLI RAADV
Sbjct: 69 EHLGCASDKLVVCGKEDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADV 128
Query: 102 ALKERRKLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKI 161
LKER +L+L++RETP + +H++NMLK++ G IMPA+P FYH+P +IDD++ F++ +I
Sbjct: 129 VLKERGQLLLVVRETPFSTLHLENMLKLSHMGVTIMPAAPGFYHQPQSIDDLVDFMVARI 188
Query: 162 LDVLGINHNLYKRWGMD 178
LD LGI L RWG D
Sbjct: 189 LDHLGIEQALVPRWGYD 205
>pir||B81023 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NMB1945 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7227204|gb|AAF42274.1| (AE002543)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Neisseria
meningitidis MC58]
Length = 190
Score = 152 bits (379), Expect = 3e-36
Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 19/180 (10%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELFA 61
R+++ I+GASG YG+K E LR E L+ SK ET ++ DE++A
Sbjct: 5 RLIIGISGASGFQYGVKALELLRAQDVETHLVVSKGAEMARASETA------YARDEVYA 58
Query: 62 P-------------IASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRK 108
IASG++ D M++APCSM+TL+++A+GF +NL+TRAADV LKERR+
Sbjct: 59 LADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRR 118
Query: 109 LVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGIN 168
LVL++RETPLNL H+ NM ++T+ GG++ P PA Y KP T DD++ + L + GI+
Sbjct: 119 LVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGID 178
>gb|AAD28781.1|AF134589_1 (AF134589) VdcB [Streptomyces sp. D7]
Length = 200
Score = 151 bits (377), Expect = 6e-36
Identities = 80/183 (43%), Positives = 116/183 (62%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDL-GHEVILLASKTGIKVAKYETGIEVKP------- 52
MR+VV +TGA+G +G++L E LR L G E L+ S+ + ETG+ V
Sbjct: 1 MRLVVGMTGATGAPFGVRLLENLRQLPGVETHLVLSRWARTTIEMETGLSVAEVSALADV 60
Query: 53 DFSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLL 112
++ A I+SGS+ D MVI PCSMKTL+ I G++ L+ RAADV LKERR+LVL+
Sbjct: 61 THHPEDQGATISSGSFRTDGMVIVPCSMKTLAGIRTGYAEGLVARAADVVLKERRRLVLV 120
Query: 113 IRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLY 172
RETPL+ IH+QNML++ + G ++P PAFY+ P T+DD++ ++ +ILD +
Sbjct: 121 PRETPLSEIHLQNMLELARMGVQLVPPMPAFYNNPQTVDDIVDHVVARILDQFDLPAPAA 180
Query: 173 KRW 175
+RW
Sbjct: 181 RRW 183
>pir||H81968 probable decarboxylase (EC 4.1.1.-) NMA0507 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7379251|emb|CAB83800.1| (AL162753) putative
decarboxylase [Neisseria meningitidis Z2491]
Length = 189
Score = 150 bits (375), Expect = 1e-35
Identities = 77/180 (42%), Positives = 112/180 (61%), Gaps = 19/180 (10%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELFA 61
R+++ I+GASG YG+K E LR E L+ SK ET ++ DE++A
Sbjct: 4 RLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMARASETA------YARDEVYA 57
Query: 62 P-------------IASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRK 108
IASG++ D M++APCSM+TL+++ +GF +NL+TRAADV LKERR+
Sbjct: 58 LADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVVHGFGDNLLTRAADVVLKERRR 117
Query: 109 LVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGIN 168
LVL++RETPLNL H+ NM ++T+ GG++ P PA Y KP T DD++ + L + GI+
Sbjct: 118 LVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGID 177
>gi|10956998 decarboxylase [Sphingomonas aromaticivorans]
>gi|11277645|pir||T31290 3-octaprenyl-4-hydroxybenzoate
carboxy-lyase (EC 4.1.1.-) - Sphingomonas
aromaticivorans plasmid pNL1 >gi|3378431|gb|AAD04014.1|
(AF079317) decarboxylase [Sphingomonas aromaticivorans]
Length = 204
Score = 150 bits (374), Expect = 1e-35
Identities = 80/182 (43%), Positives = 119/182 (64%), Gaps = 8/182 (4%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLG----HEVILLASKTGIK--VAKYETGIEVKPDFS 55
R+VV ITGA+G++YG++L E LR+ G H V+ A+ I+ + + + +E D
Sbjct: 3 RMVVGITGATGSVYGLRLLELLRETGGWETHLVMSPAALLNIREELPEGKARLEALADVV 62
Query: 56 ED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
+ + A IASGS+ + M IAPCSM+TL A+A+ S+NLITRAADV LKERR+LV++
Sbjct: 63 HNVRNVGASIASGSFVCEGMAIAPCSMRTLGAVAHALSDNLITRAADVMLKERRRLVMIT 122
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYK 173
RE PLNL H++NM T+ G +I P PAFY +P ++ D++ ++LD+ G++ K
Sbjct: 123 REAPLNLAHLRNMTACTEMGAVIFPPVPAFYARPTSLADVVDHTCMRVLDLFGLHAKSEK 182
Query: 174 RW 175
RW
Sbjct: 183 RW 184
>pir||H72099 phenylacrylate decarboxylase - Chlamydophila pneumoniae (strain
CWL029) >gi|4376536|gb|AAD18413.1| (AE001611)
Phenylacrylate Decarboxylase [Chlamydophila pneumoniae
CWL029] >gi|8163446|gb|AAF73678.1| (AE002211)
phenylacrylic acid decarboxylase [Chlamydophila
pneumoniae AR39] >gi|8978637|dbj|BAA98474.1| (AP002545)
phenylacrylate decarboxylase [Chlamydophila pneumoniae
J138]
Length = 192
Score = 148 bits (369), Expect = 5e-35
Identities = 80/186 (43%), Positives = 119/186 (63%), Gaps = 12/186 (6%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIE-VKPDFSEDELF 60
R VV I+GASG I +KL + L + H+V ++ S +G K YE G + FSE+ L
Sbjct: 3 RYVVGISGASGVILAVKLIKELVNAKHQVEVIISPSGRKTLYYELGCQSFDALFSEENLE 62
Query: 61 -----------APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKL 109
+ +ASGS P +A +I PCSM T++AI+ G ++NL+ R ADVALKERR L
Sbjct: 63 YIHTHSIQAIESSLASGSCPVEATIIIPCSMTTVAAISIGLADNLLRRVADVALKERRPL 122
Query: 110 VLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINH 169
+L+ RETPL+ IH++N+LK++++G I P P +Y KP +++D+ ++GKIL L I
Sbjct: 123 ILVPRETPLHTIHLENLLKLSKSGATIFPPMPMWYFKPQSVEDLENALVGKILAYLNIPS 182
Query: 170 NLYKRW 175
+L K+W
Sbjct: 183 DLTKQW 188
>sp|P09550|UBIX_ECOLI 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE (POLYPRENYL
P-HYDROXYBENZOATE DECARBOXYLASE) >gi|7428929|pir||XMECFD
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC
4.1.1.-) - Escherichia coli >gi|1788650|gb|AAC75371.1|
(AE000320) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
[Escherichia coli K12] >gi|1799692|dbj|BAA16157.1|
(D90862) 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE
(EC 4.1.1.-) (POLYPRENYL P-HYDROXYBENZOATE
DECARBOXYLASE). [Escherichia coli]
Length = 189
Score = 146 bits (366), Expect = 1e-34
Identities = 79/184 (42%), Positives = 118/184 (63%), Gaps = 10/184 (5%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGH-EVILLASKTGIKVAKYETGIEVKP-----DFS 55
R++V I+GASG IYG++L + LRD+ E L+ S+ + ET ++ D +
Sbjct: 3 RLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVT 62
Query: 56 ED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
D ++ A I+SGS+ MVI PCS+KTLS I + +++ L+TRAADV LKERR LVL +
Sbjct: 63 HDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCV 122
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGIN--HNL 171
RETPL+L H++ M + + G +IMP PAFYH+P ++DD+I + ++LD I +L
Sbjct: 123 RETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPEDL 182
Query: 172 YKRW 175
+ RW
Sbjct: 183 FARW 186
>gb|AAG14979.1|AF242209_4 (AF242209) phenylacrylic acid decarboxylase-like protein
[Escherichia coli] >gi|10197710|gb|AAG14990.1|AF242211_2
(AF242211) phenylacrylic acid decarboxylase-like protein
[Escherichia coli]
Length = 197
Score = 144 bits (360), Expect = 6e-34
Identities = 75/183 (40%), Positives = 120/183 (64%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLG----HEVILLASKTGIKVAKYETGIEVKP--DF 54
M+++V +TGA+G G+ L + LR++ H V+ +KT I++ + +V DF
Sbjct: 1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSTWAKTTIELETPYSAHDVAALADF 60
Query: 55 SED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLL 112
S + + A I+SGS+ D M++ PCSMKTL+ I G+++ L+ RAADV LKE RKLVL+
Sbjct: 61 SHNPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV 120
Query: 113 IRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLY 172
RETPL+ IH++NML +++ G ++P PAFY+ P T+DD++ ++ ++LD G+ H
Sbjct: 121 PRETPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA 180
Query: 173 KRW 175
+RW
Sbjct: 181 RRW 183
>pir||T44998 phenylacrylic acid decarboxylase-like protein [imported] -
Escherichia coli >gi|4887557|emb|CAB43500.1| (AJ006210)
phenylacrylic acid decarboxylase-like protein
[Escherichia coli]
Length = 197
Score = 144 bits (359), Expect = 8e-34
Identities = 74/183 (40%), Positives = 117/183 (63%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGH-EVILLASKTGIKVAKYETGIEVKP-----DF 54
M+++V +TGA+G G+ L + LR++ + E L+ SK + ET + DF
Sbjct: 1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF 60
Query: 55 SED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLL 112
S + + A I+SGS+ D M++ PCSMKTL+ I G+++ L+ RAADV LKE RKLVL+
Sbjct: 61 SHNPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV 120
Query: 113 IRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLY 172
RE PL+ IH++NML +++ G ++P PAFY+ P T+DD++ ++ ++LD G+ H
Sbjct: 121 PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPYA 180
Query: 173 KRW 175
+RW
Sbjct: 181 RRW 183
>gb|AAG14986.1|AF242210_5 (AF242210) phenylacrylic acid decarboxylase-like protein
[Escherichia coli]
Length = 197
Score = 142 bits (355), Expect = 2e-33
Identities = 74/183 (40%), Positives = 117/183 (63%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGH-EVILLASKTGIKVAKYETGIEVKP-----DF 54
M+++V +TGA+G G+ L + LR++ + E L+ SK + ET + DF
Sbjct: 1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF 60
Query: 55 SED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLL 112
S + + A I+SGS+ D M++ PCSMKTL+ I G+++ L+ RAADV LKE RKLVL+
Sbjct: 61 SHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV 120
Query: 113 IRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLY 172
RE PL+ IH++NML +++ G ++P PAFY+ P T+DD++ ++ ++LD G+ H
Sbjct: 121 PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA 180
Query: 173 KRW 175
+RW
Sbjct: 181 RRW 183
>gb|AAF73564.1| (AE002318) phenylacrylic acid decarboxylase [Chlamydia muridarum]
Length = 192
Score = 139 bits (348), Expect = 1e-32
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 16/188 (8%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSE----- 56
R +V I+GASG I + L L LGH V ++ S K YE +E K +
Sbjct: 3 RYIVGISGASGAILAVTLVSELARLGHHVDVIISPAAQKTLYYE--LETKSFLATIPSNL 60
Query: 57 ---------DELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERR 107
+ + ++SGS DA +I PCS+ T++AI+ G S+NL+ R ADVALKE+R
Sbjct: 61 HKNILIHRITSIESSLSSGSTLVDATIIVPCSVATIAAISCGLSDNLLRRVADVALKEKR 120
Query: 108 KLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGI 167
L+L+ RETPL+ IH++N+LK+ Q G +I+P P +Y +P T +D+ I+GKIL +L +
Sbjct: 121 PLILVPRETPLSAIHLENLLKLAQNGAVILPPMPTWYFRPETANDIANDIVGKILAILQL 180
Query: 168 NHNLYKRW 175
+ L KRW
Sbjct: 181 DSPLIKRW 188
>pir||C71543 probable phenylacrylate decarboxylase - Chlamydia trachomatis
(serotype D, strain UW3/Cx) >gi|3328628|gb|AAC67812.1|
(AE001295) Phenylacrylate Decarboxylase [Chlamydia
trachomatis]
Length = 192
Score = 139 bits (347), Expect = 2e-32
Identities = 73/186 (39%), Positives = 112/186 (59%), Gaps = 12/186 (6%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIE-----VKPDFSE 56
R VV I+GASG + + L L LGH + ++ S + K YE + + +F
Sbjct: 3 RYVVGISGASGIVLAVTLVSELARLGHHIDVIISPSAQKTLYYELDTKSFLSTIPQNFHN 62
Query: 57 D-------ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKL 109
+ + ++SGS DA +I PCS+ T++AI+ G ++NL+ R ADVALKE+R L
Sbjct: 63 QIVLHHISSIESSVSSGSNTIDATIIVPCSVATVAAISCGLADNLLRRVADVALKEKRPL 122
Query: 110 VLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINH 169
+L+ RE PL+ IH++N+LK+ Q G +I+P P +Y KP T +D+ I+GKIL +L ++
Sbjct: 123 ILVPREAPLSAIHLENLLKLAQNGAVILPPMPIWYFKPQTAEDIANDIVGKILAILQLDS 182
Query: 170 NLYKRW 175
L KRW
Sbjct: 183 PLIKRW 188
>gb|AAG14973.1|AF242208_6 (AF242208) phenylacrylic acid decarboxylase-like protein
[Escherichia coli]
Length = 197
Score = 139 bits (346), Expect = 3e-32
Identities = 73/183 (39%), Positives = 116/183 (62%), Gaps = 8/183 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGH-EVILLASKTGIKVAKYETGIEVKP-----DF 54
M+++V +TGA+ G+ L + LR++ + E L+ SK + ET + DF
Sbjct: 1 MKLIVGMTGATCAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF 60
Query: 55 SED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLL 112
S + + A I+SGS+ D M++ PCSMKTL+ I G+++ L+ RAADV LKE RKLVL+
Sbjct: 61 SHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV 120
Query: 113 IRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLY 172
RE PL+ IH++NML +++ G ++P PAFY+ P T+DD++ ++ ++LD G+ H
Sbjct: 121 PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA 180
Query: 173 KRW 175
+RW
Sbjct: 181 RRW 183
>pir||C75254 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - Deinococcus
radiodurans (strain R1)
>gi|6460430|gb|AAF12140.1|AE002089_3 (AE002089)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
[Deinococcus radiodurans]
Length = 195
Score = 136 bits (338), Expect = 2e-31
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 7/184 (3%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKP-------DF 54
R+VV ++G SG Y + + LR L E L+ S +V E G ++
Sbjct: 10 RLVVGVSGGSGIPYALDILRALRGLDVETHLVVSSGAKRVMSAEGGPQLADLTALASVVH 69
Query: 55 SEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIR 114
+ +L A +ASGSY M+I PCS TL+ +A+GF++NLI+RAA V LKERR LVL++R
Sbjct: 70 DDRDLAAAVASGSYRTGGMLIVPCSAGTLAKVAHGFADNLISRAAHVTLKERRPLVLVVR 129
Query: 115 ETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKR 174
E P+ +QNML AG +M ASP FYH P ++ +++ F+ ++LD G+N ++R
Sbjct: 130 EDPMPRPMLQNMLAAHDAGATVMSASPGFYHAPESLGELLGFVTARVLDQFGLNAPGFRR 189
Query: 175 WGMD 178
W D
Sbjct: 190 WRED 193
>pir||C72545 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APE1647 -
Aeropyrum pernix (strain K1) >gi|5105335|dbj|BAA80648.1|
(AP000062) 197aa long hypothetical
3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Aeropyrum
pernix]
Length = 197
Score = 136 bits (338), Expect = 2e-31
Identities = 70/183 (38%), Positives = 114/183 (62%), Gaps = 10/183 (5%)
Query: 3 VVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVK----------P 52
V +A+TG+SG ++L E L+ ++ ++ +VA+YE GIE + P
Sbjct: 8 VSIAVTGSSGVRVALRLLEALKGEVEIRGIILTRGAEEVARYEEGIEPEDLRRLLRSYAP 67
Query: 53 DFSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLL 112
+ E+++ +P+AS S DAM I P SMKT+ IA G ++L RAA L+ R+LV+
Sbjct: 68 LYMENDMSSPLASSSNQPDAMAIVPASMKTVGLIARGIPSSLPARAALAVLRLGRRLVVA 127
Query: 113 IRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLY 172
RETPL ++ ++NML I + GGI++P + +FY KP +++D++ F GK+LD LG+ ++Y
Sbjct: 128 PRETPLGVVELENMLAIARMGGIVVPLTLSFYIKPSSVEDLVDFAAGKVLDALGVKVDVY 187
Query: 173 KRW 175
+RW
Sbjct: 188 RRW 190
>gb|AAA23970.1| (M68935) dedF [Escherichia coli]
Length = 189
Score = 132 bits (328), Expect = 3e-30
Identities = 76/184 (41%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
Query: 2 RVVVAITGASGTIYGIKLYETLRDLGH-EVILLASKTGIKVAKYETGIEVKP-----DFS 55
R++V I+GASG IYG++L + LRD+ E L+ S+ + ET ++ D S
Sbjct: 3 RLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVS 62
Query: 56 ED--ELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLI 113
D ++ A I+SGS+ MVI PCS+KTLS I + +++ L+TRAADV LKERR LVL +
Sbjct: 63 HDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCV 122
Query: 114 RETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGIN--HNL 171
RETPL+L H++ M + + + PAFYH+P ++DD+I + ++LD I +L
Sbjct: 123 RETPLHLGHLRLMTQAGRNRCGDYASVPAFYHRPQSLDDVINQTVNRVLDQFAITLPEDL 182
Query: 172 YKRW 175
+ RW
Sbjct: 183 FARW 186
>pir||S74606 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubiX - Synechocystis
sp. (strain PCC 6803) >gi|1651831|dbj|BAA16758.1|
(D90900) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
[Synechocystis sp.]
Length = 206
Score = 129 bits (322), Expect = 2e-29
Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 22/195 (11%)
Query: 3 VVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELF-- 60
+++ ++GASG IY ++ + L + + L+AS+ +V + E I++ + S F
Sbjct: 5 LILGVSGASGLIYAVRAIKHLLAADYTIELVASRASYQVWQAEQNIQMPGEPSAQAEFWR 64
Query: 61 --------------------APIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAAD 100
A IASGSY MV+ PCSM T++ +A G S++L+ RAAD
Sbjct: 65 SQAGVEKGGKLICHRWGDVGATIASGSYRCAGMVVLPCSMSTVAKLAVGMSSDLLERAAD 124
Query: 101 VALKERRKLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGK 160
V +KE + LV++ RETPL+LIH++N+ + +AG I+PA PA+YH+P +++D++ F++ +
Sbjct: 125 VQIKEGKPLVVVPRETPLSLIHLRNLTSLAEAGVRIVPAIPAWYHQPQSVEDLVDFVVAR 184
Query: 161 ILDVLGINHNLYKRW 175
LD L I+ +RW
Sbjct: 185 ALDQLAIDCVPLQRW 199
>pir||D64704 phenylacrylic acid decarboxylase - Helicobacter pylori (strain
26695) >gi|2314652|gb|AAD08515.1| (AE000647)
phenylacrylic acid decarboxylase [Helicobacter pylori
26695]
Length = 187
Score = 129 bits (320), Expect = 3e-29
Identities = 74/189 (39%), Positives = 115/189 (60%), Gaps = 13/189 (6%)
Query: 1 MRVVVAITGASGTIYGIKLYETL-RDLGHEVILLASKTGIKVAKYETGIEVKPD------ 53
M++V+ I+GASG ++ E L +++ EV ++ASK VA E+ I +K
Sbjct: 1 MKLVLGISGASGIPLALRFLEKLPKEI--EVFVVASKNAHVVALEESNINLKNAMKDLRP 58
Query: 54 ----FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKL 109
F+E ++ A IASGSY M I P SM ++ IA+GF +LI+R+A V LKE+R L
Sbjct: 59 SGTFFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPL 118
Query: 110 VLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINH 169
++ RE PL+ I ++N+LK++ + II P +Y + T++ M F++GK D LGI +
Sbjct: 119 LIAPREMPLSAIMLENLLKLSHSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIEN 178
Query: 170 NLYKRWGMD 178
+LY RWGM+
Sbjct: 179 DLYPRWGMN 187
>pir||D71814 octaprenyl-4-hydroxybenzoate carboxy-lyase - Helicobacter pylori
(strain J99) >gi|4155996|gb|AAD06958.1| (AE001560)
OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE [Helicobacter
pylori J99]
Length = 187
Score = 128 bits (318), Expect = 5e-29
Identities = 73/189 (38%), Positives = 114/189 (59%), Gaps = 13/189 (6%)
Query: 1 MRVVVAITGASGTIYGIKLYETL-RDLGHEVILLASKTGIKVAKYETGIEVKPD------ 53
M++V+ I+GASG ++ E L +++ E+ ++ASK VA E+ I +K
Sbjct: 1 MKLVLGISGASGIPLALRFLEKLPKEI--EIFVVASKNAHVVALEESNINLKNAMKDLRP 58
Query: 54 ----FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKL 109
F+E ++ A IASGSY M I P SM ++ IA+GF +LI+R+A V LKE+R L
Sbjct: 59 SATFFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPL 118
Query: 110 VLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINH 169
++ RE PL+ I ++N+LK+ + II P +Y + T++ M F++GK D LGI +
Sbjct: 119 LIAPREMPLSAIMLENLLKLAHSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIEN 178
Query: 170 NLYKRWGMD 178
+LY RWGM+
Sbjct: 179 DLYPRWGMN 187
>emb|CAB92113.1| (AL356334) putative octaprenyl carboxylase [Streptomyces coelicolor
A3(2)]
Length = 216
Score = 125 bits (311), Expect = 3e-28
Identities = 73/205 (35%), Positives = 107/205 (51%), Gaps = 30/205 (14%)
Query: 4 VVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEV------------- 50
+V ++GASGT Y + L G V L+ S+ ETGI
Sbjct: 4 IVGVSGASGTPYAAAVLRALLAAGESVDLVVSRASRLTLLDETGISFRDAHWRHDLREWL 63
Query: 51 ------KPD-----------FSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNN 93
KPD +S +L A +SGSYP M+I P S ++ +A G S +
Sbjct: 64 ARGADGKPDTFDADVSGVRHWSAGDLAAGPSSGSYPTKGMLIVPASTACVAGVALGLSKD 123
Query: 94 LITRAADVALKERRKLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDM 153
L+ RAA V LKERR+LV+ +RETPL+ +++++ + AG ++PASPAFY I D+
Sbjct: 124 LLQRAASVTLKERRRLVVAVRETPLDGRTLRHLVTLDDAGASVVPASPAFYAGATHIQDL 183
Query: 154 IKFIIGKILDVLGINHNLYKRWGMD 178
+ F+ G++LD G+ H LY+RW D
Sbjct: 184 VDFVAGRVLDAAGVGHGLYRRWRGD 208
>pir||H81347 probable decarboxylase Cj0768c [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6968214|emb|CAB73033.1|
(AL139076) putative decarboxylase [Campylobacter jejuni]
Length = 187
Score = 121 bits (300), Expect = 6e-27
Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 1 MRVVVAITGASGTIYGIKLYETLRDLGHEVILLA--SKTGIKVAKYETGIEVKPD----- 53
M+V++ I+G+S G+KL + L + +L +K K E+ +
Sbjct: 1 MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTENQANLEEICQENFKYT 60
Query: 54 -FSEDE-LFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVL 111
F +D+ L +ASGS+ + +IAPCS+ +L+ I GF++ L+ RAA VALKER+KL+L
Sbjct: 61 HFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADTLLMRAAAVALKERKKLIL 120
Query: 112 LIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNL 171
+RE P + +++++MLK++Q G II P A Y K ++ M FI GK LD+L I HNL
Sbjct: 121 GVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLEQMENFIAGKWLDLLEIKHNL 180
Query: 172 YKRW 175
Y++W
Sbjct: 181 YEKW 184
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.140 0.403
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64310430
Number of Sequences: 2977
Number of extensions: 2437150
Number of successful extensions: 5539
Number of sequences better than 1.0e-10: 38
Number of HSP's better than 0.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5464
Number of HSP's gapped (non-prelim): 38
length of query: 181
length of database: 189,106,746
effective HSP length: 53
effective length of query: 128
effective length of database: 157,386,935
effective search space: 20145527680
effective search space used: 20145527680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 162 (67.5 bits)