BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0653 (cyaB-like1) DE:adenylyl cyclase, CyaB-type, putative
(170 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75072 probable adenylyl cyclase, cyab-type PAB0653 - Pyroc... 335 2e-91
pir||G71093 hypothetical protein PH1012 - Pyrococcus horikoshii ... 228 3e-59
pir||F69084 conserved hypothetical protein MTH1629 - Methanobact... 87 1e-16
gi|11499570 conserved hypothetical protein [Archaeoglobus fulgid... 84 8e-16
sp|Q57692|Y240_METJA HYPOTHETICAL PROTEIN MJ0240 >gi|2128193|pir... 80 2e-14
gb|AAC67074.1| (AE001172) conserved hypothetical protein [Borrel... 80 2e-14
pir||B70190 conserved hypothetical protein BB0723 - Lyme disease... 78 6e-14
pir||B75152 adenylyl cyclase related protein PAB2098 - Pyrococcu... 74 1e-12
pir||C71193 hypothetical protein PH1819 - Pyrococcus horikoshii ... 71 6e-12
>pir||A75072 probable adenylyl cyclase, cyab-type PAB0653 - Pyrococcus abyssi
(strain Orsay) >gi|5458390|emb|CAB49878.1| (AJ248286)
adenylyl cyclase, CyaB-type, putative [Pyrococcus
abyssi]
Length = 170
Score = 335 bits (850), Expect = 2e-91
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MEIEIKFRVSEDIKERLESLNAKFVGLEVQEDVYFDVPLPKLLRVRRISNLGKSYITYKE 60
MEIEIKFRVSEDIKERLESLNAKFVGLEVQEDVYFDVPLPKLLRVRRISNLGKSYITYKE
Sbjct: 1 MEIEIKFRVSEDIKERLESLNAKFVGLEVQEDVYFDVPLPKLLRVRRISNLGKSYITYKE 60
Query: 61 IMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFELNKIPGLG 120
IMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFELNKIPGLG
Sbjct: 61 IMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFELNKIPGLG 120
Query: 121 NFLDIEVISDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVNELSSRSS 170
NFLDIEVISDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVNELSSRSS
Sbjct: 121 NFLDIEVISDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVNELSSRSS 170
>pir||G71093 hypothetical protein PH1012 - Pyrococcus horikoshii
>gi|3257426|dbj|BAA30109.1| (AP000004) 165aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 165
Score = 228 bits (575), Expect = 3e-59
Identities = 110/164 (67%), Positives = 138/164 (84%), Gaps = 1/164 (0%)
Query: 1 MEIEIKFRVS-EDIKERLESLNAKFVGLEVQEDVYFDVPLPKLLRVRRISNLGKSYITYK 59
MEIE+KFRV+ EDIK ++E L AKF G+E QEDVYF++P PKLLRVR+I+N GKSYITYK
Sbjct: 1 MEIEVKFRVNFEDIKRKIEGLGAKFFGIEEQEDVYFELPSPKLLRVRKINNTGKSYITYK 60
Query: 60 EIMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFELNKIPGL 119
EI+D+ NEEFYE+EFEV D AIE+FKRLGF V+ +KK R IYKL +VTFELN++
Sbjct: 61 EILDKRNEEFYELEFEVQDPEGAIELFKRLGFKVQGVVKKRRWIYKLNNVTFELNRVEKA 120
Query: 120 GNFLDIEVISDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVN 163
G+FLDIEVI+ +PEE K+ IW+VA +LGLK++DVEP+LYIEL+N
Sbjct: 121 GDFLDIEVITSNPEEGKKIIWDVARRLGLKEEDVEPKLYIELIN 164
>pir||F69084 conserved hypothetical protein MTH1629 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622756|gb|AAB86102.1| (AE000922) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 177
Score = 86.6 bits (211), Expect = 1e-16
Identities = 58/174 (33%), Positives = 100/174 (57%), Gaps = 15/174 (8%)
Query: 1 MEIEIKFRVSE--DIKERLESLNAKFVGLEVQEDVYFDVP------LPKLLRVRRISNLG 52
+E+E+K ++ + ++ +R+ S+ V E Q D+YF+ P + LR+RR G
Sbjct: 2 IEVEVKAKIHDRDEMVDRILSVGGVHVSDEEQHDLYFNAPHRDFARTDEALRIRRSG--G 59
Query: 53 KSYITYK-EIMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTF 111
+++ITYK +D ++ E+E EV+D A E+ + LGF + + KER IY +G+ T
Sbjct: 60 RTFITYKGPKIDEESKTRKELETEVADPGTAAEILESLGFRMVREVVKERRIYSVGEFTV 119
Query: 112 ELNKIPGLGNFLDIEVISDDPEE---AKRKIWEVAEKLGLKKKDVEPRLYIELV 162
++ + GLG +L+IE D + A R+I+E+ KLG+ + E R Y+EL+
Sbjct: 120 SIDTVMGLGTYLEIERDLPDGSDYAGALREIFELYRKLGI-EDGFERRSYLELL 172
>gi|11499570 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7447792|pir||C69498 conserved hypothetical protein
AF1988 - Archaeoglobus fulgidus
>gi|2648546|gb|AAB89262.1| (AE000965) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 175
Score = 84.3 bits (205), Expect = 8e-16
Identities = 55/175 (31%), Positives = 100/175 (56%), Gaps = 11/175 (6%)
Query: 1 MEIEIKFRVSEDIKERLESLNAKFVGLEVQEDVYFDVPL------PKLLRVRRISNLGKS 54
ME+E KF E ++E+++ + A+ + + + D+YF P + LR+R+ ++
Sbjct: 1 MEVEAKFPYREGVEEKVKEI-AELIIEKFEHDIYFSHPCRDFASSDEALRIRQ--DVEGI 57
Query: 55 YITYK-EIMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFEL 113
+TYK +D + EV+ +V +F A ++ ++LGF A +KK R IY L + L
Sbjct: 58 TLTYKGPKVDVETKSREEVKLKVENFEAAKQILEKLGFRAVAEVKKLRRIYGLCEAIICL 117
Query: 114 NKIPGLGNFLDIEVISDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVNELSSR 168
+ + GLG F++IEV +D+ +AK K++ +AE+LG + + Y+EL+ + SR
Sbjct: 118 DDVEGLGKFVEIEVEADN-IDAKEKVFSIAEQLGYSRNESIRDSYLELILQKKSR 171
>sp|Q57692|Y240_METJA HYPOTHETICAL PROTEIN MJ0240 >gi|2128193|pir||A64330 hypothetical
protein MJ0240 - Methanococcus jannaschii
>gi|1499018|gb|AAB98225.1| (U67479) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 175
Score = 79.6 bits (193), Expect = 2e-14
Identities = 55/173 (31%), Positives = 97/173 (55%), Gaps = 14/173 (8%)
Query: 1 MEIEIKFRVSEDIK--ERLESLNAKFVGLEVQEDVYFDV------PLPKLLRVRRISNLG 52
+E+EIK ++ + K E+L+ L KF+ + QED+YF+ + LR+R G
Sbjct: 2 IEVEIKVKIDDKNKVVEQLKKLGFKFIKKKFQEDIYFNGIDRDFRETDEALRIR--DEDG 59
Query: 53 KSYITYK-EIMDRNNEEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTF 111
++TYK +D+ ++ E+E ++ D ++FK+LGF I+K R IYK D+
Sbjct: 60 NFFVTYKGPKIDKISKTREEIEVKIEDKEKMRQIFKKLGFKEVPPIRKIREIYKKEDIEA 119
Query: 112 ELNKIPGLGNFLDIE-VISDDPEEAK--RKIWEVAEKLGLKKKDVEPRLYIEL 161
++ + GLG FL++E ISD E+ K ++ E+ + L + K ++ + Y+EL
Sbjct: 120 SIDDVEGLGLFLELEKSISDINEKDKVLEEMMEILKALNISKDNIIRKSYLEL 172
>gb|AAC67074.1| (AE001172) conserved hypothetical protein [Borrelia burgdorferi]
Length = 177
Score = 79.6 bits (193), Expect = 2e-14
Identities = 56/170 (32%), Positives = 98/170 (56%), Gaps = 10/170 (5%)
Query: 2 EIEIK-FRVSEDIKERLESLNAKF--VGLEVQEDVYFDVPLPKLLRVRRISNLGKSYITY 58
EIE K F ++++K ++ N KF + E++ D+Y+ K++R+R+++ L K
Sbjct: 3 EIESKAFIPTKELKRIIKLANKKFKFIKEEIKTDIYYSNQ-KKIIRIRKLNTLEKIVTFK 61
Query: 59 KEIMDRNN--EEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFELNKI 116
K+I+D NN E E+EF++ N + + K L F K+ LIY+ ++ E+N+I
Sbjct: 62 KKILDNNNTVEINKEIEFKIDSINNFLTLIKELKFKKLYKKIKKSLIYQTNNLNVEINEI 121
Query: 117 PGLGNFLDIEVI---SDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVN 163
LG FL+IE I +D + AK++I + + GL K+++E R Y EL++
Sbjct: 122 KNLGFFLEIEKIINNQNDIDLAKKEIDNIINQFGL-KENIETRPYSELLS 170
>pir||B70190 conserved hypothetical protein BB0723 - Lyme disease spirochete
Length = 177
Score = 78.0 bits (189), Expect = 6e-14
Identities = 56/170 (32%), Positives = 97/170 (56%), Gaps = 10/170 (5%)
Query: 2 EIEIK-FRVSEDIKERLESLNAKF--VGLEVQEDVYFDVPLPKLLRVRRISNLGKSYITY 58
EIE K F ++++K ++ N KF + E++ D Y+ K++R+R+++ L K
Sbjct: 3 EIESKAFIPTKELKRIIKLANKKFKFIKEEIKTDXYYSNQ-KKIIRIRKLNTLEKIVTFK 61
Query: 59 KEIMDRNN--EEFYEVEFEVSDFNLAIEVFKRLGFDVKASIKKERLIYKLGDVTFELNKI 116
K+I+D NN E E+EF++ N + + K L F K+ LIY+ ++ E+N+I
Sbjct: 62 KKILDNNNTVEINKEIEFKIDSINNFLTLIKELKFKKLYKKIKKSLIYQTNNLNVEINEI 121
Query: 117 PGLGNFLDIEVI---SDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVN 163
LG FL+IE I +D + AK++I + + GL K+++E R Y EL++
Sbjct: 122 KNLGFFLEIEKIINNQNDIDLAKKEIDNIINQFGL-KENIETRPYSELLS 170
>pir||B75152 adenylyl cyclase related protein PAB2098 - Pyrococcus abyssi
(strain Orsay) >gi|5457807|emb|CAB49297.1| (AJ248284)
adenylyl cyclase related protein [Pyrococcus abyssi]
Length = 183
Score = 73.7 bits (178), Expect = 1e-12
Identities = 49/181 (27%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 2 EIEIKFRVSEDIKERLESLNAKFVGLEVQEDVYFDVPLPKL--------LRVRRISNLGK 53
E+E+K +E+I E++ +F+ E+ ED+Y+ P +R++R + +
Sbjct: 3 EVELKGYANEEIFEKVRE-TYRFMRREIHEDIYYQHPCRDFSKTDEALRIRIKRFNGHHE 61
Query: 54 SYITYK-EIMDRNNEEFYEVEFEVSDFNLAIEVFKRLGF-DVKASIKKERLIYKLGDVTF 111
++TYK +D+ ++ E+E E+ D ++ + LGF +V +K Y +T
Sbjct: 62 VFLTYKGPKLDKRSKTRLEIEVEIQDTEKYFQLLQNLGFREVLRIVKTREKYYVDKGITI 121
Query: 112 ELNKIPGLGNFLDIEVISDDPEEAKR---KIWEVAEKLGLKKKDVEPRLYIELVNELSSR 168
L+++ GLG F++IE + + EE R K+ + LG+++ E + Y+EL+ E S +
Sbjct: 122 TLDEVEGLGKFIEIETLVKEKEEIPRTVEKLEGILRNLGVER--FERKSYLELLLEASQK 179
Query: 169 S 169
S
Sbjct: 180 S 180
>pir||C71193 hypothetical protein PH1819 - Pyrococcus horikoshii
>gi|3258255|dbj|BAA30938.1| (AP000007) 183aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 183
Score = 71.4 bits (172), Expect = 6e-12
Identities = 51/177 (28%), Positives = 94/177 (52%), Gaps = 17/177 (9%)
Query: 2 EIEIKFRVSEDIKERLESLNAKFVGLEVQEDVYFDVPLPKL--------LRVRRISNLGK 53
E+E+K +++I E++ +F+ E+ ED+Y+ P +R++R + +
Sbjct: 3 EVELKGYANDEIFEKVRE-TFEFMRKEIHEDIYYQHPCRDFSKTDEALRIRIKRFNGHNE 61
Query: 54 SYITYK-EIMDRNNEEFYEVEFEVS-DFNLAIEVFKRLGF-DVKASIKKERLIYKLGDVT 110
++TYK +D ++ E+E E+ D + E+ RLGF +V +K Y VT
Sbjct: 62 VFLTYKGPKIDEKSKTRLEIEVEIQEDVDKYFELLDRLGFKEVLKVVKTREKYYVEKGVT 121
Query: 111 FELNKIPGLGNFLDIEVI---SDDPEEAKRKIWEVAEKLGLKKKDVEPRLYIELVNE 164
L+++ GLG F++IE + D+ EA K+ ++ +LG++K E R Y+EL+ E
Sbjct: 122 ITLDEVEGLGKFIEIETLVKEKDEIPEAVEKLEKILRELGVEK--FERRSYLELLLE 176
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.140 0.378
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57242839
Number of Sequences: 2977
Number of extensions: 2318671
Number of successful extensions: 8165
Number of sequences better than 1.0e-10: 9
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8154
Number of HSP's gapped (non-prelim): 9
length of query: 170
length of database: 189,106,746
effective HSP length: 57
effective length of query: 113
effective length of database: 154,992,987
effective search space: 17514207531
effective search space used: 17514207531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 162 (67.5 bits)