BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0678 (hemV-1) DE:iron (III) ABC transporter, ATP-binding
protein (hemV-1)
(257 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 502 e-141
pir||E71067 probable ferrichrome transport ATP-binding protein -... 384 e-106
pir||G72406 hypothetical protein TM0191 - Thermotoga maritima (s... 247 1e-64
gi|11498042 iron (III) ABC transporter, ATP-binding protein (hem... 231 6e-60
sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 208 5e-53
gi|11498996 iron (III) ABC transporter, ATP-binding protein (hem... 178 7e-44
pir||F82938 iron(III) dicitrate transport ATP-binding protein UU... 159 3e-38
pir||B71128 probable iron (III) dicitrate transport ATP-binding ... 151 7e-36
pir||F81257 probable hemein uptake system ATP-binding protein Cj... 150 2e-35
pir||C75255 iron ABC transporter, ATP-binding protein - Deinococ... 147 1e-34
sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 147 1e-34
pir||D69763 ferrichrome ABC transporter (ATP-binding p) homolog ... 146 3e-34
pir||A64409 ferric enterobactin transport ATP-binding protein ho... 145 5e-34
dbj|BAB05306.1| (AP001512) iron(III) dicitrate transport system ... 144 9e-34
pir||F75035 iron (iii) abc transporter, ATP-binding protein (hem... 144 9e-34
pir||E71045 probable ABC transporter - Pyrococcus horikoshii >gi... 143 2e-33
gi|10957420 iron ABC transporter, ATP-binding protein [Deinococc... 143 3e-33
pir||F72421 iron(III) ABC transporter, ATP-binding protein - The... 143 3e-33
emb|CAA06499.1| (AJ005352) ATP binding protein [Staphylococcus a... 142 5e-33
gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus ... 141 6e-33
pir||T36413 probable ABC-type iron-siderophore transport system ... 140 1e-32
pir||G70022 iron(III) dicitrate transport permease homolog yusV ... 140 1e-32
pir||T50583 ABC-type transport protein, ATP-binding component [i... 139 4e-32
dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system... 138 5e-32
dbj|BAB04800.1| (AP001510) ferrichrome ABC transporter (ATP-bind... 138 9e-32
sp|O05732|Y888_HELPY PROBABLE IRON CHELATIN TRANSPORT ATP-BINDIN... 138 9e-32
sp|Q9ZKW3|Y888_HELPJ PROBABLE IRON CHELATIN TRANSPORT ATP-BINDIN... 138 9e-32
pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyroco... 136 2e-31
gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica] 135 4e-31
gi|10957444 hemin ABC transporter, ATP-binding protein [Deinococ... 135 4e-31
pir||D82281 ferric vibriobactin ABC transporter, ATP-binding pro... 134 8e-31
dbj|BAB05108.1| (AP001511) ABC transporter (ATP-binding protein)... 134 8e-31
sp|P15031|FECE_ECOLI IRON(III) DICITRATE TRANSPORT ATP-BINDING P... 134 8e-31
dbj|BAB04746.1| (AP001510) ferrichrome ABC transporter (ATP-bind... 134 8e-31
pir||T36888 probable iron-siderophore uptake system ATP-binding ... 134 1e-30
gb|AAD48883.1| (U52150) ATPase [Vibrio cholerae] 133 2e-30
pir||T03482 iron(iii) dicitrate transport ATP-binding protein - ... 133 2e-30
pir||C83126 ferric enterobactin transport protein FepC PA4158 [i... 132 4e-30
pir||B71234 probable transport protein - Pyrococcus horikoshii >... 132 5e-30
gb|AAD33527.2|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]... 132 5e-30
pir||F83058 probable ATP-binding component of ABC transporter PA... 131 7e-30
pir||E70046 iron transport system homolog yvrA - Bacillus subtil... 131 7e-30
pir||S74440 iron(III) dicitrate transport system permease protei... 131 7e-30
pir||F81431 ABC transporter ATP-binding protein Cj0142c [importe... 131 9e-30
emb|CAA07722.1| (AJ007906) FhuC [Rhizobium leguminosarum] 131 9e-30
pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB -... 131 1e-29
pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) P... 130 1e-29
pir||T44799 iron transport ATP-binding protein irp1D [imported] ... 130 2e-29
gb|AAD37495.1|AF109162_3 (AF109162) HmuV [Corynebacterium diphth... 130 2e-29
gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, A... 129 3e-29
sp|Q57243|YC72_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 129 3e-29
pir||E69812 ferrichrome ABC transporter (ATP-binding p) homolog ... 128 6e-29
emb|CAB94640.1| (AL359215) putative iron transport protein, ATP-... 128 6e-29
pir||D69180 ABC transporter - Methanobacterium thermoautotrophic... 128 8e-29
sp|P49938|FHUC_BACSU FERRICHROME TRANSPORT ATP-BINDING PROTEIN F... 127 2e-28
pir||T45470 ATP-binding ABC transport protein [imported] - Erysi... 127 2e-28
gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-bindin... 126 2e-28
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING P... 126 2e-28
pir||S16298 ferric enterobactin transport protein fepC - Escheri... 126 3e-28
pir||A71357 probable ABC transporter, ATP-binding protein (troB)... 125 5e-28
dbj|BAB07014.1| (AP001518) ferrichrome ABC transporter (ATP-bind... 125 5e-28
gb|AAG20610.1| (AE005131) ferric enterobactin transport protein;... 125 7e-28
gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archa... 125 7e-28
sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 125 7e-28
pir||G81279 enterochelin uptake ATP-binding protein Cj1354 [impo... 124 9e-28
pir||B82891 ferrichrome transport ATP-binding protein UU435 [imp... 124 1e-27
emb|CAC14366.1| (AL445963) Fe uptake system permease [Streptomyc... 124 1e-27
emb|CAB92552.1| (AJ275980) FecE protein [Serratia sp. ATCC39006] 124 1e-27
gb|AAK42217.1| ABC transporter [Sulfolobus solfataricus] 124 1e-27
gb|AAK42084.1| ABC transporter, ATP binding protein. [Sulfolobus... 123 1e-27
pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AA... 123 1e-27
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 123 2e-27
pir||B83225 ATP-binding component of ABC phosphonate transporter... 123 3e-27
gb|AAG20605.1| (AE005130) ferrichrome ABC transporter ATP-bindin... 123 3e-27
sp|Q47087|CBRD_ERWCH ACHROMOBACTIN TRANSPORT ATP-BINDING PROTEIN... 122 3e-27
emb|CAB76301.1| (AL158057) putative ABC-transport protein, ATP-b... 122 4e-27
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 122 6e-27
emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococ... 122 6e-27
pir||S75197 ABC-type transport protein slr2044 - Synechocystis s... 121 7e-27
pir||A70338 ABC transporter - Aquifex aeolicus >gi|2983088|gb|AA... 121 7e-27
gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter... 121 7e-27
pir||S61910 hypothetical protein 5 - Streptococcus parasanguis >... 121 1e-26
pir||S60887 ferric exochelin uptake protein fxuB - Mycobacterium... 121 1e-26
pir||B83282 probable ATP-binding component of ABC transporter PA... 120 1e-26
sp|Q58206|Y796_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 120 1e-26
gb|AAG20232.1| (AE005098) phosphonates transport ATP-binding; Ph... 120 2e-26
pir||H81018 iron(III) ABC transporter, ATP-binding protein NMB19... 119 3e-26
gb|AAD56937.1|AF180520_2 (AF180520) ATP-binding protein MtsB [St... 118 5e-26
gi|11467416 putative protein of 244 amino acids [Cyanophora para... 117 1e-25
pir||C72576 probable glutamine transport ATP-binding protein APE... 117 1e-25
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 117 1e-25
pir||S54440 hemin-specific ATP-binding protein [validated] - Yer... 116 2e-25
gi|10954682 probable mikimopine transporter gene~similar to potA... 116 2e-25
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 116 2e-25
dbj|BAB07011.1| (AP001518) ferrichrome ABC transporter (ATP-bind... 116 2e-25
gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [S... 116 3e-25
sp|P07821|FHUC_ECOLI FERRICHROME TRANSPORT ATP-BINDING PROTEIN F... 116 3e-25
pir||B82352 iron(III) ABC transporter, ATP-binding protein VC020... 116 3e-25
pir||G69043 cobalt transport ATP-binding protein O - Methanobact... 115 7e-25
pir||A69095 cobalt transport ATP-binding protein O - Methanobact... 115 7e-25
emb|CAA29254.1| (X05810) fhuC product (AA 1-265) [Escherichia coli] 114 1e-24
sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA... 114 1e-24
sp|Q55281|MNTA_SYNY3 MANGANESE TRANSPORT SYSTEM ATP-BINDING PROT... 114 1e-24
pir||C82485 iron(III) ABC transporter, ATP-binding protein VCA02... 114 1e-24
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 113 2e-24
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 113 2e-24
gb|AAC27811.1| (U64516) unknown [Shigella dysenteriae] 113 2e-24
sp|P45092|ARTP_HAEIN ARGININE TRANSPORT ATP-BINDING PROTEIN ARTP... 113 2e-24
sp|Q57399|YE70_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 113 2e-24
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphy... 113 2e-24
gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Strepto... 113 2e-24
pir||A81962 probable ABC transporter ATP-binding subunit NMA0448... 113 2e-24
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 113 3e-24
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 113 3e-24
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 113 3e-24
gb|AAD41066.1|AF128999_2 (AF128999) SitB [Salmonella typhimurium] 113 3e-24
sp|Q56993|HMUV_YERPE HEMIN TRANSPORT SYSTEM ATP-BINDING PROTEIN ... 112 4e-24
dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein)... 112 4e-24
sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BINDING P... 112 5e-24
emb|CAB59657.1| (AL132674) putative ABC transport protein, ATP-b... 112 5e-24
emb|CAC11378.1| (AL445063) gliding motility protein related [The... 112 5e-24
emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-b... 112 5e-24
pir||C64496 ABC transporter ATP-binding protein - Methanococcus ... 111 6e-24
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 111 6e-24
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 111 6e-24
gb|AAK40808.1| Iron (III) ABC transporter, ATP-binding protein [... 111 1e-23
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 111 1e-23
sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 110 1e-23
pir||D35718 phnC protein - Escherichia coli >gi|147196|gb|AAA243... 110 1e-23
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 110 1e-23
pir||G72064 ABC transporter ATPase - Chlamydophila pneumoniae (s... 110 1e-23
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 110 2e-23
gb|AAB01532.1| (U38418) ProV [Bacillus subtilis] 110 2e-23
gb|AAC68697.1| (AF097414) EfmC [Enterococcus faecium] 109 2e-23
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 109 2e-23
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 109 2e-23
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 109 2e-23
pir||D83281 histidine transport protein HisP PA2926 [imported] -... 109 2e-23
pir||D72415 zinc ABC transporter, ATP-binding protein - Thermoto... 109 3e-23
sp|Q58903|YF08_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 109 4e-23
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 109 4e-23
sp|Q58418|PSTB_METJA PROBABLE PHOSPHATE TRANSPORT ATP-BINDING PR... 108 6e-23
pir||C64666 glutamine transport protein glnQ - Helicobacter pylo... 108 6e-23
emb|CAB97433.1| (AL389898) putative glycine betaine ABC transpor... 108 6e-23
dbj|BAB06693.1| (AP001517) alkylphosphonate ABC tranporter (ATP-... 108 6e-23
pir||A83142 probable ATP-binding component of ABC transporter PA... 108 7e-23
dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding pr... 108 7e-23
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 108 7e-23
sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 108 9e-23
pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AA... 108 9e-23
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 108 9e-23
pir||F81363 probable glutamine transport ATP-binding protein Cj0... 108 9e-23
pir||B72089 ABC transporter, ATP-binding protein CP0412 [importe... 108 9e-23
sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN ... 107 1e-22
pir||C48518 ABC-type transport protein (PEB1 5' region) - Campyl... 107 1e-22
pir||G69633 glutamine transport protein glnQ - Bacillus subtilis... 107 1e-22
pir||H70432 ABC transporter - Aquifex aeolicus >gi|2983897|gb|AA... 107 1e-22
gb|AAD09976.1| (AF055088) ATP-binding cassette; PsaB [Streptococ... 107 1e-22
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 107 2e-22
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 107 2e-22
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 107 2e-22
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc... 107 2e-22
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 106 2e-22
gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein ... 106 2e-22
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 106 2e-22
pir||F71561 probable rRNA methylase - Chlamydia trachomatis (ser... 106 2e-22
pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [im... 106 2e-22
pir||F83122 probable ATP-binding component of ABC transporter PA... 106 2e-22
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 106 3e-22
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 106 3e-22
pir||D82147 amino acid ABC transporter, ATP-binding protein VC18... 106 3e-22
sp|P40735|YBXA_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 106 4e-22
dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.] 106 4e-22
gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus ... 105 5e-22
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 105 5e-22
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 105 5e-22
gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Th... 105 5e-22
pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [... 105 5e-22
sp|P54954|YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 105 6e-22
gi|11499407 ABC transporter, ATP-binding protein [Archaeoglobus ... 105 6e-22
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 105 6e-22
gb|AAC35949.1| (AF077010) ABC transporter ATPase TroB [Chlamydia... 105 6e-22
pir||H82224 probable vitamin B12 ABC transporter, ATP-binding pr... 105 6e-22
pir||A83621 probable ATP-binding component of ABC transporter PA... 105 6e-22
gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stu... 104 8e-22
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 104 8e-22
pir||A72401 ABC transporter, ATP-binding protein - Thermotoga ma... 104 8e-22
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 104 8e-22
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 104 1e-21
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 104 1e-21
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 104 1e-21
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 104 1e-21
emb|CAB60178.1| (AL132824) probable ABC sugar transport ATP bind... 104 1e-21
gb|AAG20909.1| (AE005157) ABC transporter, ATP-binding protein; ... 104 1e-21
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 103 2e-21
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 103 2e-21
pir||B83294 probable ATP-binding component of ABC transporter PA... 103 2e-21
sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 102 3e-21
pir||T35147 glutamate uptake system ATP-binding protein - Strept... 102 3e-21
pir||E72757 probable phosphate transport ATP-binding protein pst... 102 3e-21
pir||E75564 ABC transporter, ATP-binding protein - Deinococcus r... 102 3e-21
dbj|BAB04159.1| (AP001508) transport system protein [Bacillus ha... 102 3e-21
pir||H69746 ABC transporter (binding protein) homolog ybdA - Bac... 102 4e-21
sp|P75186|PSTB_MYCPN PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PST... 102 5e-21
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 102 5e-21
gb|AAF73593.1| (AE002339) ABC transporter, ATP-binding protein [... 102 5e-21
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 102 5e-21
gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport syst... 102 5e-21
pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AA... 101 7e-21
pir||G71192 probable cobalt transport ATP-binding protein - Pyro... 101 7e-21
sp|P46920|OPAA_BACSU GLYCINE BETAINE TRANSPORT ATP-BINDING PROTE... 101 9e-21
dbj|BAA08932.1| (D50453) glycine betain/L-proline transport ATPa... 101 9e-21
pir||G81714 ABC transporter, ATP-binding protein TC0339 [importe... 101 1e-20
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 100 2e-20
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 100 2e-20
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 100 2e-20
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 100 2e-20
pir||G72750 probable ABC transporter ATP-binding protein APE0532... 100 2e-20
pir||B75207 multiple sugar-binding transport ATP-binding protein... 100 2e-20
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 100 2e-20
pir||B70327 ABC transporter - Aquifex aeolicus >gi|2982983|gb|AA... 100 3e-20
pir||T46754 AdcC protein [imported] - Streptococcus pneumoniae >... 100 3e-20
gb|AAF81672.1|AF232688_1 (AF232688) SloA [Streptococcus mutans] 100 3e-20
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 100 3e-20
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 99 4e-20
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 99 4e-20
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 99 4e-20
sp|P06611|BTUD_ECOLI VITAMIN B12 TRANSPORT ATP-BINDING PROTEIN B... 99 5e-20
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 99 5e-20
pir||B69756 ABC transporter (ATP-binding protein) homolog ycdI -... 99 5e-20
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 99 5e-20
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 99 5e-20
dbj|BAA89347.1| (AB032934) orfC [Vibrio alginolyticus] 99 6e-20
pir||E82879 ABC transporter UU539 [imported] - Ureaplasma urealy... 99 6e-20
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 99 6e-20
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 98 8e-20
gi|11499426 cobalt transport ATP-binding protein (cbiO-2) [Archa... 98 8e-20
gi|11498428 branched-chain amino acid ABC transporter, ATP-bindi... 98 8e-20
pir||C71517 probable ABC transporter ATPase - Chlamydia trachoma... 98 8e-20
pir||S76536 hypothetical protein - Synechocystis sp. (strain PCC... 98 1e-19
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 98 1e-19
pir||H69858 cation ABC transporter (ATP-binding protein) homolog... 98 1e-19
pir||T46652 ABC transporter ZurA [imported] - Listeria monocytog... 98 1e-19
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 98 1e-19
gb|AAD33131.1|AF099015_3 (AF099015) Fe uptake system permease [S... 98 1e-19
pir||T36808 probable sugar transport system ATP-binding chain - ... 98 1e-19
pir||C81208 ABC transporter, ATP-binding protein NMB0356 [import... 98 1e-19
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 98 1e-19
sp|P46342|YQGK_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 97 2e-19
pir||H71892 osmoprotection ATP-binding protein - Helicobacter py... 97 2e-19
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 97 2e-19
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 97 2e-19
pir||H81784 probable ABC transporter ATP-binding protein NMA2131... 97 2e-19
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 97 2e-19
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 97 2e-19
pir||E82504 phosphate ABC transporter, ATP-binding protein VCA00... 97 2e-19
emb|CAA61303.1| (X88849) ceuD [Campylobacter coli] 97 2e-19
pir||C64622 osmoprotection protein - Helicobacter pylori (strain... 97 2e-19
gb|AAB94549.1| (AF016580) HutD [Vibrio cholerae] 97 2e-19
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 96 3e-19
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 96 3e-19
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 96 4e-19
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 96 4e-19
pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protei... 96 4e-19
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 96 4e-19
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 96 4e-19
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 96 5e-19
gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus ... 96 5e-19
pir||B75082 phosphate abc transporter, ATP-binding protein (pstb... 96 5e-19
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 96 5e-19
pir||D81263 probable ABC transport system ATP-binding protein Cj... 95 7e-19
dbj|BAB04432.1| (AP001509) ABC transporter (ATP-binding protein)... 95 9e-19
gb|AAD02045.1| (AF035964) ATP-binding protein B [Brucella abortus] 94 1e-18
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 94 1e-18
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 94 2e-18
gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceu... 94 2e-18
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 94 2e-18
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 94 2e-18
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 94 2e-18
gi|11498986 branched-chain amino acid ABC transporter, ATP-bindi... 93 3e-18
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 93 3e-18
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 93 4e-18
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 93 4e-18
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 93 4e-18
gb|AAC44218.1| (U59229) PhoC [Sinorhizobium meliloti] 92 5e-18
pir||A69876 ABC transporter (ATP-binding protein) homolog ylmA -... 92 5e-18
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 92 5e-18
gb|AAG23548.1|AF244599_1 (AF244599) hypothetical ABC transporter... 92 5e-18
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 92 6e-18
pir||T34924 ABC transporter ATP binding protein - Streptomyces c... 92 6e-18
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 92 6e-18
pir||A83118 probable ATP-binding component of ABC transporter PA... 92 6e-18
gb|AAB48547.1| (U50749) unknown [Leuconostoc mesenteroides subsp... 92 8e-18
pir||F70032 ABC transporter (ATP-binding protein) homolog yvcR -... 92 8e-18
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 91 1e-17
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 91 1e-17
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 91 1e-17
sp|Q57538|Y664_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 91 1e-17
sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 91 1e-17
emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycob... 91 1e-17
emb|CAB88481.1| (AL353816) putative ABC transport system ATP-bin... 91 1e-17
pir||G82400 hemin ABC transporter, ATP-binding protein HutD VCA0... 91 1e-17
gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; Nos... 91 1e-17
gi|10957143 Potential ABC transporter [Lactococcus lactis] >gi|1... 90 3e-17
gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dp... 89 4e-17
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 89 4e-17
gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melano... 89 5e-17
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 89 5e-17
gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanog... 89 5e-17
pir||B72417 sugar ABC transporter, ATP-binding protein - Thermot... 88 9e-17
pir||B64458 high-affinity branched-chain amino acid transport AT... 88 1e-16
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 87 2e-16
pir||H83243 probable ATP-binding/permease fusion ABC transporter... 87 2e-16
sp|P38053|SSUB_ECOLI PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP... 87 2e-16
pir||JE0248 ATP-binding cassette half-transporter - rat >gi|2982... 87 3e-16
gb|AAF55241.1| (AE003710) CG4225 gene product [Drosophila melano... 87 3e-16
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 86 3e-16
sp|P34712|MDR1_CAEEL MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROT... 86 3e-16
pir||S30328 multidrug resistance protein 2 - Entamoeba histolyti... 86 3e-16
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 86 3e-16
pir||T23476 hypothetical protein K08E7.9 - Caenorhabditis elegan... 86 3e-16
pir||H72425 ABC transporter, ATP-binding protein - Thermotoga ma... 86 3e-16
emb|CAB76322.1| (AL158060) putative ABC transport protein, ATP-b... 86 3e-16
emb|CAC12200.1| (AL445066) ABC transporter ATP-binding protein r... 86 3e-16
pir||S25198 vacuolar membrane protein HMT1 - fission yeast (Sch... 86 5e-16
sp|Q02592|HMT1_SCHPO HEAVY METAL TOLERANCE PROTEIN PRECURSOR >gi... 86 5e-16
pir||T41582 heavy metal tolerance protein precursor - fission ye... 86 5e-16
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 85 6e-16
gi|11498429 branched-chain amino acid ABC transporter, ATP-bindi... 85 6e-16
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 85 8e-16
emb|CAB41942.1| (AJ132617) Putative PstB protein [Burkholderia sp.] 85 8e-16
pir||A75590 ABC transporter, ATP-binding protein - Deinococcus r... 85 8e-16
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 85 1e-15
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 85 1e-15
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 85 1e-15
sp|P18767|NDVA_RHIME BETA-(1-->2)GLUCAN EXPORT ATP-BINDING PROTE... 84 1e-15
sp|Q50293|Y180_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 84 1e-15
sp|P77509|YPHE_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 84 1e-15
pir||T35090 probable ABC transport ATP-binding subunit - Strepto... 84 1e-15
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 84 1e-15
sp|P39326|YTFR_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 84 2e-15
gi|11498492 ribose ABC transporter, ATP-binding protein (rbsA-1)... 84 2e-15
pir||G72418 sugar ABC transporter, ATP-binding protein - Thermot... 84 2e-15
emb|CAB88958.1| (AL353864) probable ABC transport protein, ATP-b... 84 2e-15
sp|Q07756|NODI_AZOCA NODULATION ATP-BINDING PROTEIN I >gi|486720... 83 2e-15
sp|P45275|YG18_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 83 3e-15
pir||T36344 probable ABC-type transport system ATP-binding prote... 83 3e-15
pir||H70610 probable ABC-typetransmembrane transport portein - M... 82 5e-15
pir||T22094 hypothetical protein ZK455.7 - Caenorhabditis elegan... 82 5e-15
pir||F71800 ABC transporter, ATP-binding protein - Helicobacter ... 82 5e-15
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 82 5e-15
sp|P15361|P29_MYCHR PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN... 82 7e-15
pir||E75444 branched-chain amino acid ABC transporter, ATP-bindi... 82 7e-15
emb|CAB90903.1| (AL355753) putative ABC-transport protein, ATP-b... 82 7e-15
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 82 7e-15
gb|AAG19337.1| (AE005028) ribose ABC transporter ATP-binding; Rb... 82 7e-15
gb|AAG26946.1|AC069471_7 (AC069471) P-glycoprotein, putative [Ar... 82 7e-15
gi|6322640 ABC transporter, glycoprotein, component of a-factor ... 82 9e-15
prf||1512309A multidrug resistance P glycoprotein [Saccharomyces... 82 9e-15
pir||T18939 hypothetical protein C05A9.1 - Caenorhabditis elegan... 82 9e-15
emb|CAB60586.1| (AL117200) contains similarity to Pfam domain: P... 82 9e-15
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 82 9e-15
pir||T31617 hypothetical protein Y50E8A.m - Caenorhabditis elegans 82 9e-15
sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 81 1e-14
gb|AAK43187.1| ABC transporter, ATP binding protein, putative [S... 81 1e-14
gi|6679297 P glycoprotein 2 [Mus musculus] >gi|126929|sp|P21440|... 81 1e-14
pir||S74565 ABC-type transport protein slr0251 - Synechocystis s... 81 1e-14
pir||D70009 probable ABC transporter yufO - Bacillus subtilis >g... 81 1e-14
pir||D70986 probable ABC transporter Rv1747 - Mycobacterium tube... 81 1e-14
pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elega... 81 1e-14
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ... 81 1e-14
dbj|BAB06041.1| (AP001515) sugar ABC transporter (ATP-binding pr... 81 1e-14
pir||E71296 probable spermidine/putrescine ABC transporter, ATP-... 81 2e-14
pir||H64716 ABC transporter, ATP-binding protein - Helicobacter ... 81 2e-14
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T... 81 2e-14
pir||T22090 hypothetical protein F42E11.1 - Caenorhabditis elega... 81 2e-14
gb|AAF16567.1|AC012563_20 (AC012563) putative ABC transporter; 6... 81 2e-14
gb|AAG01549.1|AF291822_1 (AF291822) multidrug resistance protein... 81 2e-14
pir||S30327 multidrug resistance protein 1 - Entamoeba histolyti... 80 2e-14
gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori] 80 2e-14
pir||A82497 ribose ABC transporter, ATP-binding protein VCA0128 ... 80 2e-14
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 80 2e-14
gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens] 80 3e-14
emb|CAA75729.1| (Y15635) ABCR [Homo sapiens] 80 3e-14
gb|AAD10836.1| (U52079) P-glycoprotein [Solanum tuberosum] 80 3e-14
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANS... 80 3e-14
pir||H82808 toluene tolerance protein XF0421 [imported] - Xylell... 80 3e-14
dbj|BAB07449.1| (AP001519) ribose ABC transporter (ATP-binding p... 80 3e-14
gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis] 80 3e-14
gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sa... 80 3e-14
gb|AAK40626.1| RNase L inhibitor [Sulfolobus solfataricus] 80 3e-14
pir||S47673 leucine transport protein livF - Escherichia coli >g... 80 3e-14
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 80 3e-14
gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo... 79 5e-14
sp|P45046|XYLG_HAEIN D-XYLOSE TRANSPORT ATP-BINDING PROTEIN XYLG... 79 6e-14
gb|AAC48716.1| (U90126) ABC transporter [Bos taurus] 79 6e-14
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ... 79 6e-14
pir||B81796 probable ABC transporter NMA2223 [imported] - Neisse... 79 6e-14
gb|AAF51341.2| (AE003585) CG17646 gene product [Drosophila melan... 79 6e-14
gi|4557876 ATP-binding cassette, sub-family A member 4; ATP bind... 78 8e-14
pir||A81218 ABC transporter, ATP-binding protein NMB0264 [import... 78 8e-14
gb|AAB88657.1| (U62933) multidrug resistance protein 1 [Aspergil... 78 1e-13
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 78 1e-13
pir||H82351 probable hemolysin secretion ATP-binding protein VC0... 78 1e-13
sp|P04983|RBSA_ECOLI RIBOSE TRANSPORT ATP-BINDING PROTEIN RBSA >... 78 1e-13
gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-bin... 78 1e-13
gi|11466697 mbpX [Marchantia polymorpha] >gi|126794|sp|P10091|CY... 77 2e-13
gb|AAA93553.1| (L23922) P-glycoprotein 5 [Entamoeba histolytica] 77 2e-13
gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens] 77 2e-13
dbj|BAB05989.1| (AP001515) ABC transporter (ATP-binding protein)... 77 2e-13
sp|Q57180|YA51_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 77 2e-13
sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 77 2e-13
pir||A42150 P-glycoprotein pgp1 - Arabidopsis thaliana >gi|38498... 76 3e-13
pir||E72493 probable ribose ABC transport system ATP-binding pro... 76 3e-13
gb|AAF51131.1| (AE003580) CG9664 gene product [Drosophila melano... 76 3e-13
gb|AAG11416.1|AF263455_1 (AF263455) TagA [Dictyostelium discoideum] 76 3e-13
sp|P45081|CYDC_HAEIN TRANSPORT ATP-BINDING PROTEIN CYDC >gi|1075... 76 4e-13
gb|AAD02044.1| (AF035964) ATP-binding protein A [Brucella abortus] 76 5e-13
gi|10954721 hypothetical ABC-transporter gene~similar to teuA ge... 76 5e-13
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ... 75 9e-13
emb|CAB95908.1| (AL359988) putative ABC transport system ATP-bin... 75 9e-13
pir||F71732 ABC transporter ATP-binding protein (abcT3) RP214 - ... 75 1e-12
gb|AAF50847.1| (AE003569) CG1819 gene product [Drosophila melano... 74 2e-12
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 74 2e-12
pir||A83472 probable ATP-binding component of ABC transporter PA... 74 2e-12
gi|11467679 ABC transporter [Guillardia theta] >gi|5902710|sp|O7... 73 3e-12
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 73 3e-12
pir||S75333 oligopeptide transport protein oppF - Synechocystis ... 73 3e-12
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 73 4e-12
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 72 6e-12
emb|CAA05625.1| (AJ002584) AtMRP4 [Arabidopsis thaliana] >gi|373... 72 6e-12
sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP... 71 1e-11
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 71 1e-11
gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus ... 71 1e-11
sp|P39459|NASD_KLEPN NITRATE TRANSPORT PROTEIN NASD >gi|2642137|... 71 1e-11
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 71 2e-11
gb|AAF48511.1| (AE003500) CG8473 gene product [Drosophila melano... 70 2e-11
dbj|BAA96813.1| (AB040146) ABC transporter A [Thermus thermophilus] 70 3e-11
gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus m... 69 4e-11
gb|AAG39073.1|AF287263_1 (AF287263) ATP-binding cassette 1, sub-... 69 5e-11
>pir||C75077 iron (iii) abc transporter, ATP-binding protein (hemv-1) PAB0678 -
Pyrococcus abyssi (strain Orsay)
>gi|5458432|emb|CAB49920.1| (AJ248286) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Pyrococcus
abyssi]
Length = 257
Score = 502 bits (1278), Expect = e-141
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK 60
MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK
Sbjct: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK 60
Query: 61 GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV
Sbjct: 61 GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR
Sbjct: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK
Sbjct: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
Query: 241 VAKLGREIVPLVGADSL 257
VAKLGREIVPLVGADSL
Sbjct: 241 VAKLGREIVPLVGADSL 257
>pir||E71067 probable ferrichrome transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257652|dbj|BAA30335.1| (AP000005) 250aa
long hypothetical ferrichrome transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 250
Score = 384 bits (975), Expect = e-106
Identities = 181/249 (72%), Positives = 223/249 (88%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+K IEV NL+FS+NG+ +L +NF++ +G FL+ILGPNGAGKTTLLRCIAGILK KG +K
Sbjct: 1 MKGIEVENLKFSHNGREILHDINFEIDKGSFLIILGPNGAGKTTLLRCIAGILKYKGSIK 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
V G I++++R+ELAKLLAYVPQR+EPGFLRVFDFVLLGR+PYMGL+P R+DL+AV AL
Sbjct: 61 VLGNDIKELSRIELAKLLAYVPQRIEPGFLRVFDFVLLGRKPYMGLNPGRKDLKAVEDAL 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+LL ++ EDR+MKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI+VM IIKD
Sbjct: 121 RLLGIQRLEDRIMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIEVMEIIKD 180
Query: 185 LIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKVAKL 244
L+ GKTV+TVMHDLTLALRFGE+FLFLKDG TG++TR+ELE+++LSETYG+ ++VA++
Sbjct: 181 LVKRGKTVVTVMHDLTLALRFGEEFLFLKDGRSTGLLTREELEEKILSETYGVKIRVARV 240
Query: 245 GREIVPLVG 253
E++PLVG
Sbjct: 241 EGEVIPLVG 249
>pir||G72406 hypothetical protein TM0191 - Thermotoga maritima (strain MSB8)
>gi|4980687|gb|AAD35283.1|AE001704_4 (AE001704)
iron(III) ABC transporter, ATP-binding protein, putative
[Thermotoga maritima]
Length = 258
Score = 247 bits (624), Expect = 1e-64
Identities = 114/238 (47%), Positives = 169/238 (70%), Gaps = 1/238 (0%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
++ + NL FSY K +L V F +GE + ILGPNGAGK+TLL+CIAGILKC+G V++F
Sbjct: 1 MLRIRNLSFSYRNKKILDNVTFSAQKGELIAILGPNGAGKSTLLKCIAGILKCQG-VEIF 59
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
K + R +LA+++ YVPQR++PG L V++ +LLGR+PY+ +SP +ED+E V R ++
Sbjct: 60 SKPLEQYTRRDLARIVGYVPQRIDPGMLNVYNLILLGRKPYVSVSPSKEDIEIVNRVVER 119
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
L ++ + K LSGGELQKV+IARA+ QE ++LLDEPTNNLDPK+QI++M I++D +
Sbjct: 120 LNLQHLVFQRAKNLSGGELQKVSIARALVQEPEILLLDEPTNNLDPKNQIEIMEIVQDFV 179
Query: 187 GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKVAKL 244
K + VMH++ LALRF ++F+F+KDG++ R L + E YG++ V ++
Sbjct: 180 KSRKMALVVMHEINLALRFADRFIFMKDGKIVRDGERSILTPDLFWEVYGVNGVVKEI 237
>gi|11498042 iron (III) ABC transporter, ATP-binding protein (hemV-1)
[Archaeoglobus fulgidus] >gi|7445946|pir||F69303 iron
(III) ABC transporter, ATP-binding protein (hemV-1)
homolog - Archaeoglobus fulgidus
>gi|2650201|gb|AAB90807.1| (AE001075) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Archaeoglobus
fulgidus]
Length = 248
Score = 231 bits (583), Expect = 6e-60
Identities = 121/238 (50%), Positives = 166/238 (68%), Gaps = 1/238 (0%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
+IEV +L +SYN K V++ + F+ GEF+ ILGPNG+GKTTLL+C+AGILK KG V V
Sbjct: 1 MIEVRSLYYSYNSKPVIQDLEFEAERGEFVFILGPNGSGKTTLLKCMAGILKPKGAVLVE 60
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
SI ++ +LA+ LAYVPQR + GFL V+D VLLGRRPYMG SP ED V L L
Sbjct: 61 KVSIDRLSGRDLARKLAYVPQRSDSGFLTVYDVVLLGRRPYMGFSPSDEDYRIVEDVLSL 120
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
L +++F R + LSGGELQKV IARA+AQ+ ++LLDEPTNNLD K+QI++M++++ +
Sbjct: 121 LDLKKFSYRRINELSGGELQKVMIARALAQKPKILLLDEPTNNLDVKNQIEIMKLLRKIA 180
Query: 187 GEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKVAK 243
E + +VI+ MHDL LA F +K + LK+G + ++ L + E YGI V+V +
Sbjct: 181 DEKEISVISTMHDLNLAAIFADKIVMLKNGRIFASGGKEVLTQENIKEVYGIEVEVLR 238
>sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0089
>gi|2127897|pir||A64311 ferric enterobactin transport
ATP-binding protein homolog - Methanococcus jannaschii
>gi|1498853|gb|AAB98070.1| (U67466) ferric enterobactin
transport ATP-binding protein [Methanococcus jannaschii]
Length = 254
Score = 208 bits (524), Expect = 5e-53
Identities = 110/254 (43%), Positives = 161/254 (63%), Gaps = 3/254 (1%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-G 61
+ + ++ V +EF+Y + +L + F+V GE + ILG NGAGK+TLL+CI ILK K G
Sbjct: 1 MSLMILSVDGVEFAYKSRQILNNIKFEVKRGEVVSILGVNGAGKSTLLKCINKILKPKRG 60
Query: 62 DVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
+ + I++++ LELAK + YVPQR E ++ VFD VLLGR+P++ D+E
Sbjct: 61 TILIDNFDIKNLDNLELAKKVGYVPQRAEGNYMTVFDAVLLGRKPHIKWEVSDRDIEITH 120
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
+ LKLL +E++ R LSGGELQKV IARA+ QE ++LLDEPTNNLD K+Q++VM+I
Sbjct: 121 KVLKLLNLEDYALRYTNELSGGELQKVIIARALVQEPQILLLDEPTNNLDLKNQLEVMKI 180
Query: 182 IKDLI-GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
I D+ + I VMHDL LALR+ +KF+ LKDG + R+ + + YG+
Sbjct: 181 IMDISKSQNIASIVVMHDLNLALRYSDKFIMLKDGVIYAEGGREVINPENIKAVYGVDAY 240
Query: 241 VAKL-GREIVPLVG 253
+ + G +V +G
Sbjct: 241 IENVRGIPVVVPIG 254
>gi|11498996 iron (III) ABC transporter, ATP-binding protein (hemV-3)
[Archaeoglobus fulgidus] >gi|7430360|pir||H69424
probable iron(III) ABC transporter hemV-3 -
Archaeoglobus fulgidus >gi|2649168|gb|AAB89842.1|
(AE001007) iron (III) ABC transporter, ATP-binding
protein (hemV-3) [Archaeoglobus fulgidus]
Length = 405
Score = 178 bits (446), Expect = 7e-44
Identities = 101/243 (41%), Positives = 144/243 (58%), Gaps = 6/243 (2%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGK 68
V + + VL+ V F+VGEGE L +LGPNG+GKTT+LR I G+LK KG V + G+
Sbjct: 5 VKGVSVKLGSREVLKDVTFEVGEGELLALLGPNGSGKTTMLRTIFGMLKPLKGVVLLDGR 64
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYM-GLS-PRREDLEAVRRALKL 126
+ E A+ L ++PQ L+V D V+LGR PY+ GL P+ ED A ALK
Sbjct: 65 EVGSAE--EAARKLGFLPQDTPMTNLKVIDVVMLGRTPYLSGLKRPKEEDYRAAMEALKE 122
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
+ +E+ DR+ LSGGE QKV +AR AQ+ ++LLDEPT +LD +QI++M I++ +
Sbjct: 123 VGMEKMADRLFSELSGGERQKVMLARVFAQQPEIMLLDEPTAHLDIAAQIEIMEIVRSKV 182
Query: 187 GEGKTVITVMHDLTLALRFGEKFLFLKDGEVT-GIMTRDELEDRVLSETYGISVKVAKLG 245
+GK I +HD+ LA F K L +KDG V D + + + + +G V V K G
Sbjct: 183 EQGKAAIVAIHDINLASSFATKILMVKDGVVVYAGRPEDVITEESIRDVFGADVVVRKYG 242
Query: 246 REI 248
R +
Sbjct: 243 RGV 245
>pir||F82938 iron(III) dicitrate transport ATP-binding protein UU069 [imported]
- Ureaplasma urealyticum
>gi|6899019|gb|AAF30474.1|AE002106_8 (AE002106)
iron(III) dicitrate transport ATP-binding protein
[Ureaplasma urealyticum]
Length = 291
Score = 159 bits (398), Expect = 3e-38
Identities = 84/240 (35%), Positives = 149/240 (62%), Gaps = 8/240 (3%)
Query: 10 VSNLEFSYNGK--NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDV-KVF 66
++NL + Y+ K VL+ ++F + + F ILGPNG GK+T + I +LK K ++ KVF
Sbjct: 30 INNLSYRYHKKLPEVLKNLSFSIKKNSFTTILGPNGCGKSTTAKAIVKLLKLKKNIIKVF 89
Query: 67 GKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSP--RREDLEAVRRA 123
++I +++ +LA+L++Y+PQ +E P RV DF+ GR PY+G S +ED +
Sbjct: 90 DRNINELSFKQLAQLISYIPQSIEIPQGTRVIDFITFGRNPYLGFSGILGKEDKLIIDLV 149
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
+ +++ + +++ M+ LSGG+ QKV +A + Q+TP+ILLDEPT LD K+Q +++ +K
Sbjct: 150 INEMQLHDLKEKFMQELSGGQRQKVILALCLVQDTPIILLDEPTTYLDIKNQYELLESLK 209
Query: 184 DL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKV 241
L I KT+I ++HD+ A+++ ++ LK+G++ +E + +L Y I ++
Sbjct: 210 KLQILRQKTIIAILHDINQAIQYSDEVFVLKNGQIYANGNPNEVITKELLKNVYNIDAQI 269
>pir||B71128 probable iron (III) dicitrate transport ATP-binding protein -
Pyrococcus horikoshii >gi|3257201|dbj|BAA29884.1|
(AP000003) 241aa long hypothetical iron (III) dicitrate
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 241
Score = 151 bits (378), Expect = 7e-36
Identities = 95/230 (41%), Positives = 136/230 (58%), Gaps = 11/230 (4%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFGKSIR 71
++ FSY LR V F +GE L I+GPNG+GK+TLL+CIAGILK +G + G ++
Sbjct: 10 DISFSYGNFEALRDVKFKAKKGELLAIIGPNGSGKSTLLKCIAGILKPRGKIVYDGINLL 69
Query: 72 DMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVE 130
++ E AK+++YVPQ P F V +FV L G R D+E ALK + +
Sbjct: 70 NLKPKERAKIVSYVPQSSFPQFSFTVEEFVEL------GTYARGGDIE---DALKRVGLV 120
Query: 131 EFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGK 190
E ++ LSGGE Q IARA+AQ + V+LLDEPT++LD V+ I+++L E K
Sbjct: 121 EKRHELITRLSGGEYQLALIARALAQGSEVMLLDEPTSHLDINHTKKVIEILQELKKE-K 179
Query: 191 TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
+I V HDL LA+ + ++ L LK+GEV + + L V+ + YGI K
Sbjct: 180 LIIAVFHDLNLAINYSDELLVLKNGEVAWLGDPNSLPLEVIGKVYGIVPK 229
>pir||F81257 probable hemein uptake system ATP-binding protein Cj1616 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6969033|emb|CAB73604.1| (AL139079) putative haemin
uptake system ATP-binding protein [Campylobacter jejuni]
Length = 258
Score = 150 bits (375), Expect = 2e-35
Identities = 85/242 (35%), Positives = 149/242 (61%), Gaps = 7/242 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
++++ NL F+Y+ K++L+ ++ ++ F+ ILGPNG+GK+TLL+ I L KG + +
Sbjct: 1 MLKIHNLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLLKLILKNLSPNKGVISL 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMG---LSPRREDLEAVR 121
F +I+D + E AK+ +VPQ+ E L+V D +L+ + P + S +ED+ ++
Sbjct: 61 FNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYPNLKHAFSSYSKEDILEIK 120
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
K LR+E F +R + +LSGGE Q++ +ARA+ ++ ++ LDEPT+ LD I+++ +
Sbjct: 121 EFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKILFLDEPTSALDLNYAIELLNL 180
Query: 182 IKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL-EDRVLSETYGISV 239
+ L+ E V+ ++HDL LA F +K LFLK+GE+ T EL +L E Y ++
Sbjct: 181 CEKLVKEKNIAVVAILHDLNLASIFCDKILFLKEGEIKYFGTSKELFTQEILKEIYDLNC 240
Query: 240 KV 241
++
Sbjct: 241 EI 242
>pir||C75255 iron ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460417|gb|AAF12128.1|AE002088_5
(AE002088) iron ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 274
Score = 147 bits (368), Expect = 1e-34
Identities = 102/238 (42%), Positives = 137/238 (56%), Gaps = 12/238 (5%)
Query: 23 LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIRDMNRLELAKL 81
+RGV+ GEF I+GPNGAGK+TLLR + G+ + G+V++ G+ +R NR E ++
Sbjct: 34 VRGVDATFRTGEFAAIIGPNGAGKSTLLRALLGLSGLEAGEVRLNGRPLRTWNRAERSRR 93
Query: 82 LAYVPQRVE-PGFLRVFDFVLLGRRP---YMGLSPRRE----DLEAVRRALKLLRVEEFE 133
LAY+ Q P RV D V LGR GL P R D EAV RAL FE
Sbjct: 94 LAYLAQSEPLPPETRVRDVVTLGRGAGEWRWGLLPTRPWSEADEEAVNRALDRTDTRRFE 153
Query: 134 DRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVI 193
DR + LSGGE Q+VA+ARA+A ++LLDEPTN+LD +D+MR ++ + G VI
Sbjct: 154 DRRVSELSGGEGQRVALARALAAGPELLLLDEPTNHLDLAYTLDLMRSLRREVEAGLGVI 213
Query: 194 TVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKVA-KLGREIV 249
V+HDL LA R ++ L L GEV T E L ++ YG+ V V + GR +V
Sbjct: 214 AVLHDLNLAAR-ADRLLLLSRGEVLATGTPAEVLTPEHIAAAYGVRVDVTEQAGRPLV 270
>sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0873
>gi|2826343|gb|AAB98878.1| (U67531) ferric enterobactin
transport ATP-binding protein [Methanococcus jannaschii]
Length = 290
Score = 147 bits (367), Expect = 1e-34
Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 6/237 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+++ NL Y V+ G+N ++ GE L I+GPNGAGK+TLL+ IA LK KG V +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPKKGVVYL 60
Query: 66 FGKSIRDMNRLELAKLLAYV-PQRVEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRR 122
GK I D+ +LAK +A V +RV PG + FD V +GR PY L R D + +
Sbjct: 61 NGKKIHDLKPKDLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFGRLTERDKKIIIE 120
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
+ + + E ++ +S GE QK+ IARA+AQE V++LDEPT+ LD K +I++ ++
Sbjct: 121 SARAVNAEYLLEKNFFEMSDGERQKIMIARALAQEPKVLILDEPTSFLDAKHKIELTLLL 180
Query: 183 KDLIGEGKTVITV-MHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGI 237
+ L E I V +HD+ LALR +K +K+ +V + ++ +++E Y +
Sbjct: 181 RKLADEKNLAIVVTLHDIELALRIADKMALIKNHKVIAYGYPENVMKREIVNELYDL 237
>pir||D69763 ferrichrome ABC transporter (ATP-binding p) homolog yclP - Bacillus
subtilis >gi|1805452|dbj|BAA09014.1| (D50453) homologue
of iron dicitrate transport ATP-binding protein FecE of
E. coli [Bacillus subtilis] >gi|2632683|emb|CAB12190.1|
(Z99106) similar to ferrichrome ABC transporter
(ATP-binding protein) [Bacillus subtilis]
Length = 252
Score = 146 bits (364), Expect = 3e-34
Identities = 82/245 (33%), Positives = 141/245 (57%), Gaps = 4/245 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
++EV N+ Y GK VL + + +G+ +GPNGAGK+TLL ++ ++K G++ +
Sbjct: 1 MVEVRNVSKQYGGKVVLEETSVTIQKGKITSFIGPNGAGKSTLLSIMSRLIKKDSGEIYI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
G+ I + ELAK ++ + Q + L + D V GR PY ED + +AL
Sbjct: 61 DGQEIGACDSKELAKKMSILKQANQINIRLTIKDLVSFGRFPYSQGRLTEEDWVHINQAL 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+++E+ +D+ + LSGG+ Q+ IA IAQ+T I LDEP NNLD K +++M+++K
Sbjct: 121 SYMKLEDIQDKYLDQLSGGQCQRAFIAMVIAQDTDYIFLDEPLNNLDMKHSVEIMKLLKR 180
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKVA 242
L+ E GKT++ V+HD+ A + + + LK+G + +E +E VL E Y +++ +
Sbjct: 181 LVEELGKTIVIVIHDINFASVYSDYIVALKNGRIVKEGPPEEMIETSVLEEIYDMTIPIQ 240
Query: 243 KLGRE 247
+ +
Sbjct: 241 TIDNQ 245
>pir||A64409 ferric enterobactin transport ATP-binding protein homolog -
Methanococcus jannaschii
Length = 290
Score = 145 bits (362), Expect = 5e-34
Identities = 85/237 (35%), Positives = 137/237 (56%), Gaps = 6/237 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+++ NL Y V+ G+N ++ GE L I+GPNGAGK+TLL+ IA LK KG V +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPKKGVVYL 60
Query: 66 FGKSIRDMNRLELAKLLAYV-PQRVEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRR 122
GK I D+ +LAK +A V +RV PG + FD V +GR PY L R D + +
Sbjct: 61 NGKKIHDLKPKDLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFGRLTERDKKIIIE 120
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
+ + + E ++ +S GE QK+ IARA+AQE V++LDEPT+ LD K +I++ ++
Sbjct: 121 SARAVNAEYLLEKNFFEMSDGERQKIMIARALAQEPKVLILDEPTSFLDAKHKIELTLLL 180
Query: 183 KDLI-GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGI 237
+ L + ++ +HD+ LALR +K +K+ +V + ++ +++E Y +
Sbjct: 181 RKLADXKNLAIVVTLHDIELALRIADKMALIKNHKVIAYGYPENVMKREIVNELYDL 237
>dbj|BAB05306.1| (AP001512) iron(III) dicitrate transport system (permease)
[Bacillus halodurans]
Length = 491
Score = 144 bits (360), Expect = 9e-34
Identities = 81/242 (33%), Positives = 145/242 (59%), Gaps = 8/242 (3%)
Query: 7 VIEVSNLEFSYNGKN-VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
+++ N+ Y+ K +++ ++F V +GE ILGPNG+GKTTLL+ ++G+L +G +
Sbjct: 1 MLDAQNVSVGYDEKTPIIQQLSFQVHKGEIFGILGPNGSGKTTLLKAVSGLLSPSEGTIT 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL-RVFDFVLLGRRPYMG---LSPRREDLEAV 120
+ GK+I D + ELA+ +A +PQ + F +V + V LGR P+ S +ED +
Sbjct: 61 LHGKAIADYHSKELAQKMAVLPQTADTAFAYKVKEVVALGRYPHQKGWLASESQEDERVI 120
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R A++ +F ++ ++TLSGGE Q+ +ARA+ QE ++LLDEPTN+LD Q+ ++
Sbjct: 121 REAMEQTDTWKFRNKPLQTLSGGERQRALLARALCQEPDLLLLDEPTNHLDISHQMQLLD 180
Query: 181 IIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMT-RDELEDRVLSETYGIS 238
+KD + TV+ ++HDL +A + ++ L L +G + + + R + + L+ Y
Sbjct: 181 ALKDWTRTRQLTVVAILHDLNMASLYCDRVLLLNEGRMVDLNSPRQVMTEHQLANVYETK 240
Query: 239 VK 240
++
Sbjct: 241 IR 242
>pir||F75035 iron (iii) abc transporter, ATP-binding protein (hemv-2) PAB1536 -
Pyrococcus abyssi (strain Orsay)
>gi|5458692|emb|CAB50179.1| (AJ248287) iron (III) ABC
transporter, ATP-binding protein (hemV-2) [Pyrococcus
abyssi]
Length = 238
Score = 144 bits (360), Expect = 9e-34
Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 11/227 (4%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFGKSIR 71
N+ FSY VL+ F +GE + I+GPNG+GK+TLL+CIAGILK +G + +
Sbjct: 7 NVSFSYGDFEVLKNAEFSARKGELVSIIGPNGSGKSTLLKCIAGILKPRGRISYDDVDLV 66
Query: 72 DMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVE 130
++ E AK+++YVPQ P F V +FV LG G V AL+++ +E
Sbjct: 67 NLRPKERAKIVSYVPQSSFPEFSFTVEEFVELGTYATGG---------DVEEALRMVGLE 117
Query: 131 EFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGK 190
++ LSGGE Q IARA+AQ + V+LLDEPT++LD ++M ++ L E K
Sbjct: 118 RKRKELITRLSGGEYQLALIARALAQGSDVMLLDEPTSHLDINHTKEIMDLLTRLKDE-K 176
Query: 191 TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGI 237
+I V+HDL LAL + + + +K G V EL V+ E YGI
Sbjct: 177 LIIAVLHDLNLALNYSDYIVIIKKGIVVWKGKTQELPLEVIEEVYGI 223
>pir||E71045 probable ABC transporter - Pyrococcus horikoshii
>gi|3258082|dbj|BAA30765.1| (AP000006) 260aa long
hypothetical ABC transporter [Pyrococcus horikoshii]
Length = 260
Score = 143 bits (357), Expect = 2e-33
Identities = 90/256 (35%), Positives = 147/256 (57%), Gaps = 15/256 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKV 65
VIE +L YNG N + + F + GE L++LGPNGAGKTTLLR +AG + KG +KV
Sbjct: 4 VIEAKDLTIMYNGVNAVEDLTFKLKRGETLLLLGPNGAGKTTLLRVLAGFHTEYKGYLKV 63
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLG---RRPYMGLSPRREDLEA 119
FGKS LE+ +AYVPQ L V D V +G +R + + RE ++
Sbjct: 64 FGKS-----PLEVKDRVAYVPQTFSINSRVPLSVLDVVAMGAIYKRGIVHFNVPREVIKK 118
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
+ L+ L +++ R + LSGG+ Q+V IARA+ E ++LLDEP + LDPK++++V
Sbjct: 119 GIKVLEFLGLKDLSSRSFRELSGGQKQRVIIARALMSEPELLLLDEPLSALDPKARLEVT 178
Query: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGI 237
++ + + G ++I HD+ G+K + + + ++ T DE L D ++ + YG
Sbjct: 179 SVLSRIKEKFGISMIITTHDINPLAEIGDKVMLI-NKKLVAFGTPDEVLRDEIIGKVYGP 237
Query: 238 SVKVAKLGREIVPLVG 253
+ K ++G+++ ++G
Sbjct: 238 ASKTVRVGKKLYCIIG 253
>gi|10957420 iron ABC transporter, ATP-binding protein [Deinococcus radiodurans]
>gi|7473070|pir||D75631 iron ABC transporter,
ATP-binding protein - Deinococcus radiodurans (strain
R1) >gi|6460849|gb|AAF12553.1|AE001826_22 (AE001826)
iron ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 269
Score = 143 bits (356), Expect = 3e-33
Identities = 84/236 (35%), Positives = 137/236 (57%), Gaps = 6/236 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
+ +L Y ++ +N + G+ I+GPNG GK+TLLR +A +L + G ++++
Sbjct: 7 LSTDHLRLGYGQSVIVSDMNLSIAGGKVTSIIGPNGCGKSTLLRALARLLPAQNGHIELY 66
Query: 67 GKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSP--RREDLEAVRRA 123
G+++ + +A+ LA +PQ P L V + V GR P+ G P R ED AV A
Sbjct: 67 GQALHTLPSRAIAQKLAILPQGPSAPEGLSVEELVWFGRHPHQGRFPVQREEDRAAVAWA 126
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L + F R + +LSGG+ Q+ IA ++AQ+T ++LLDEPT LDP Q++V+++
Sbjct: 127 LDQTGMRVFAGRPLDSLSGGQRQRAWIAMSLAQQTDILLLDEPTTYLDPSHQLEVLQLAG 186
Query: 184 DL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGI 237
L +GKTV+ V+HDL A+R+ ++ + LK GEV DE L +L++ +G+
Sbjct: 187 RLNRDQGKTVVMVLHDLNQAVRYSDEIIALKGGEVYAQGPADEVLTHELLADVFGL 242
>pir||F72421 iron(III) ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980566|gb|AAD35172.1|AE001694_8 (AE001694)
iron(III) ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 256
Score = 143 bits (356), Expect = 3e-33
Identities = 81/217 (37%), Positives = 133/217 (60%), Gaps = 4/217 (1%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDV 63
++++ + NL F Y G L+ +N V +GEF I+GPNG+GKTTLL+ + GI + KG V
Sbjct: 1 MEIVRIENLFFQYRGGFSLKNINLSVKKGEFFGIIGPNGSGKTTLLKILVGIFRPQKGTV 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAV 120
++ G+ + +R E+AK++ V Q P + V + V +GR P++ L R+D E V
Sbjct: 61 QLLGRIPWETSRKEMAKIVTLVSQDFFPSYDFSVKEIVEMGRLPHLSLLSGTSRKDEEIV 120
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
++L+L +F DR TLS GE +KV +++AI Q+T ++L+DE T +LD + V
Sbjct: 121 LKSLELTGTLKFVDRNFWTLSSGERRKVVLSKAIVQDTEILLIDELTAHLDYNNVSLVGN 180
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++K L GKT+I+V HD+ +A ++ +K+GE+
Sbjct: 181 VLKRLKESGKTIISVFHDINVASALCDRIGVMKNGEM 217
>emb|CAA06499.1| (AJ005352) ATP binding protein [Staphylococcus aureus]
Length = 253
Score = 142 bits (354), Expect = 5e-33
Identities = 82/253 (32%), Positives = 146/253 (57%), Gaps = 4/253 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+I+V NL + N + +L ++ D+ +G+ ++GPNGAGK+TLL I +++ G+VK+
Sbjct: 1 MIQVGNLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFDNGEVKI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
G+ + D +L+K ++ + Q + V V GR PY +ED + V AL
Sbjct: 61 DGRLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNCGRFPYSKGRLTKEDHDIVNDAL 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
LL++++ +R +K+LSGG+ Q+ IA IAQ+T ILLDEP NNLD K + +M+ +K
Sbjct: 121 DLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQTLKM 180
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKVA 242
L + K ++ V HD+ A + ++ + LK+G++ +D ++ VLS+ Y + +++
Sbjct: 181 LAHKMNKAIVIVSHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSNVLSDLYDMDIQIE 240
Query: 243 KLGREIVPLVGAD 255
+ + + L D
Sbjct: 241 HIRNQRICLYFKD 253
>gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445711|pir||E69497 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648557|gb|AAB89272.1| (AE000966) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 253
Score = 141 bits (353), Expect = 6e-33
Identities = 85/244 (34%), Positives = 135/244 (54%), Gaps = 15/244 (6%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDV 63
+KVIE ++ FSYN VL +N +G GEF+ +LGPNGAGK+T+LR I G+LK KG V
Sbjct: 1 MKVIEFYDVSFSYNSSEVLSDLNLGIGRGEFVAVLGPNGAGKSTMLRLILGLLKPTKGTV 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEP------GFLRVFDFVLLGRRPYMGLSPRREDL 117
KV G + D R + + Y+PQR E +V LL R +G S RE
Sbjct: 61 KVLGYNAFD-ERDKFVGRVGYLPQREEILLEAPLTVSQVIKLPLLARGKKVGDSKLRE-- 117
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
AL ++ ++ F D++ LSGG+ QKV +ARA+ + ++LLDEP N +D SQ
Sbjct: 118 -----ALSMVGLDGFGDKLFSELSGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQEK 172
Query: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGI 237
++ ++ ++ +GKTV+ V+H++ L ++ + L + + + + + YG
Sbjct: 173 IVEVLAEMSSKGKTVVAVVHNINPLLHNIDRVVLLNRRIIAAGKPNEVFSEENIIKAYGT 232
Query: 238 SVKV 241
S+ +
Sbjct: 233 SIPI 236
>pir||T36413 probable ABC-type iron-siderophore transport system ATP-binding
protein - Streptomyces coelicolor
>gi|5763946|emb|CAB53325.1| (AL109974) putative
iron-siderophore ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 287
Score = 140 bits (350), Expect = 1e-32
Identities = 82/230 (35%), Positives = 132/230 (56%), Gaps = 5/230 (2%)
Query: 17 YNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF-GKSIRDMNR 75
Y ++V+ G++ + G I+GPNG GK+TLLR ++ +L+ G V G+ I +
Sbjct: 28 YGTRSVIDGLDVAIPPGVITTIIGPNGCGKSTLLRTLSRLLRPTGGTVVLDGEDIAALRT 87
Query: 76 LELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLLRVEEF 132
++AK L +PQ V P L V D V GR P+ + +D + VR+AL + V +
Sbjct: 88 RDVAKKLGLLPQAPVAPEGLTVSDLVARGRHPHQSWLRQWSSDDADVVRQALAMTGVSDL 147
Query: 133 EDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTV 192
DR + +LSGG+ Q+V I+ +AQ T ++LLDEPT LD +DV+ ++ DL G+TV
Sbjct: 148 ADRPVDSLSGGQRQRVWISMTLAQGTDLLLLDEPTTYLDLAHAVDVLDLVDDLHESGRTV 207
Query: 193 ITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKV 241
+ V+HDL LA R+ + + +++G + RD + +L E +G+ KV
Sbjct: 208 VMVLHDLNLAARYSDNLVVMREGAILAQGHPRDVITAGLLHEAFGLRAKV 257
>pir||G70022 iron(III) dicitrate transport permease homolog yusV - Bacillus
subtilis >gi|2635790|emb|CAB15283.1| (Z99120) similar to
iron(III) dicitrate transport permease [Bacillus
subtilis]
Length = 275
Score = 140 bits (350), Expect = 1e-32
Identities = 83/218 (38%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKG-DV 63
+ I L Y ++ +N + +GE V +G NG GK+TLLR +A ++K +G V
Sbjct: 3 MSAISTETLSLGYGDAVIIDELNLTIPKGEITVFIGSNGCGKSTLLRSLARLMKPRGGSV 62
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--REDLEAV 120
+ G++I + E+AK LA +PQ P L V V GR PY + +ED EAV
Sbjct: 63 LLEGRAIAKLPTKEVAKELAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAV 122
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
RALK ++E+ DR + +LSGG+ Q+ IA +AQET +ILLDEPT LD QI+++
Sbjct: 123 ERALKATKLEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILD 182
Query: 181 IIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++ +L E +T++ V+HDL LA R+ + +KD +
Sbjct: 183 LLFELNEKEDRTIVMVLHDLNLACRYAHHLVAIKDKRI 220
>pir||T50583 ABC-type transport protein, ATP-binding component [imported] -
Streptomyces coelicolor >gi|6469259|emb|CAB61720.1|
(AL133220) ABC transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 280
Score = 139 bits (346), Expect = 4e-32
Identities = 87/232 (37%), Positives = 125/232 (53%), Gaps = 3/232 (1%)
Query: 13 LEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAG-ILKCKGDVKVFGKSIR 71
L G+ VL GV+ +V GE L ++GPNGAGK+TLL +A + +G V+V G+ +
Sbjct: 32 LRVHLGGRPVLDGVDVEVRAGEVLALVGPNGAGKSTLLGALAADVPAAEGVVRVHGRPVS 91
Query: 72 DMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVE 130
D + ELA A +PQ F V + V +GR P+ G ED AV A+ V
Sbjct: 92 DWSAPELALRRAVLPQSASLSFPFAVEEVVRMGRAPWAGGDRADEDEAAVAEAMARTEVA 151
Query: 131 EFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGK 190
F R LSGGE +VA+AR +AQ P++LLDEPT LD + Q V+R+ ++ G
Sbjct: 152 GFAGRPFSALSGGERARVALARVLAQRAPLLLLDEPTAALDLRHQELVLRLCRERARAGD 211
Query: 191 TVITVMHDLTLALRFGEKFLFLKDGEV-TGIMTRDELEDRVLSETYGISVKV 241
V+ V+HDL LA + ++ L+ G + G + +LSE Y V+V
Sbjct: 212 AVVVVLHDLALAAAYADRVALLRSGRIAAGGPPSEVFAQGLLSEVYDQPVEV 263
>dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system (permease)
[Bacillus halodurans]
Length = 271
Score = 138 bits (345), Expect = 5e-32
Identities = 83/215 (38%), Positives = 129/215 (59%), Gaps = 5/215 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
IE NL Y+ ++ ++ ++ +GE V++G NG GK+TLLR +A +LK + G V +
Sbjct: 4 IETKNLTLGYDDTIIIEELDLNIPKGEITVLIGGNGCGKSTLLRSLARLLKPQSGAVLLE 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRA 123
G SI+ + E+A LA +PQ E P L V+ + GR P+ GL + +D E V +A
Sbjct: 64 GSSIQQLATKEVATKLAILPQGPEAPEGLTVYQLIKQGRYPHQGLFKKWTSKDEEKVMQA 123
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ R+ E DR + LSGG+ Q+ IA +AQ+T +ILLDEPT LD QI+++ ++
Sbjct: 124 LEATRLTELADRPVDALSGGQRQRAWIAMTLAQDTEIILLDEPTTYLDLTHQIEILDLLF 183
Query: 184 DL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+L E +T++ V+HDL LA R+ + +KD V
Sbjct: 184 ELNEREKRTIVMVLHDLNLACRYAHHLIAVKDRTV 218
>dbj|BAB04800.1| (AP001510) ferrichrome ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 274
Score = 138 bits (343), Expect = 9e-32
Identities = 86/235 (36%), Positives = 132/235 (55%), Gaps = 11/235 (4%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+ +I +L Y ++ +N + EG+ I+G NG GK+T+L+ I+ I + V
Sbjct: 1 MSIIYTESLSIGYGDTKIVEDLNIAIPEGKITTIIGANGCGKSTILKTISRIHAPQSGVA 60
Query: 65 VF-GKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYM-GLSPRRE-DLEAV 120
GK+I ++AK +A +PQ E PG L V++ V GR P+ G E D + V
Sbjct: 61 YLDGKAIHKQKTRDIAKKMAILPQTPESPGELTVYELVSYGRFPHQKGFGRLTEADHQIV 120
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+AL +EEF R ++ LSGG+ Q+V IA A+AQ+TP++LLDEPT LD Q++V+
Sbjct: 121 EKALHSTGLEEFRHRPIQALSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDMAHQLEVLL 180
Query: 181 IIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVT------GIMTRDELED 228
++K L EG+T++ V+HDL A RF + + L+ G V +M D L D
Sbjct: 181 LLKKLNEQEGRTIVMVLHDLNHAARFSDYLIALRKGTVVKEGTPEDVMCSDVLRD 235
>sp|O05732|Y888_HELPY PROBABLE IRON CHELATIN TRANSPORT ATP-BINDING PROTEIN HP0888
>gi|7445778|pir||H64630 iron(III) dicitrate ABC
transporter, ATP-binding protein - Helicobacter pylori
(strains 26695 and 60190) >gi|2072456|gb|AAC45245.1|
(U94318) FepC [Helicobacter pylori]
>gi|2314024|gb|AAD07936.1| (AE000598) iron(III)
dicitrate ABC transporter, ATP-binding protein (fecE)
[Helicobacter pylori 26695]
Length = 255
Score = 138 bits (343), Expect = 9e-32
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 6/214 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC--KGDVK 64
V+EV NL F Y+ K +L ++F V + IL PNG+GKTTLL+C+ G+LK + ++K
Sbjct: 2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIK 61
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAVR 121
K I + E AKL+AY+PQ F V DFVL+G+ ++ L P+ + ++
Sbjct: 62 ACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEAT 121
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
L+ L +E +D+ + LSGG+ Q V +AR++ Q TP++LLDEPT+ LD K+Q
Sbjct: 122 SVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDA 181
Query: 182 IKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKD 214
IKD + + + +V+ +HD L R + LKD
Sbjct: 182 IKDEMKKRELSVLVNIHDPNLVARHSTHVVMLKD 215
>sp|Q9ZKW3|Y888_HELPJ PROBABLE IRON CHELATIN TRANSPORT ATP-BINDING PROTEIN HP0888
>gi|7445834|pir||G71884 iron (III) dicitrate transport
system ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4155391|gb|AAD06401.1| (AE001511) IRON(III)
DICITRATE TRANSPORT SYSTEM ATP-BINDING PROTEIN
[Helicobacter pylori J99]
Length = 255
Score = 138 bits (343), Expect = 9e-32
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 6/214 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC--KGDVK 64
V+EV NL F Y+ K +L ++F V + IL PNG+GKTTLL+C+ G+LK + ++K
Sbjct: 2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIK 61
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAVR 121
K I + E AKL+AY+PQ F V DFVL+G+ ++ L P+ + ++
Sbjct: 62 ACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEAT 121
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
L+ L +E +D+ + LSGG+ Q V +AR++ Q TP++LLDEPT+ LD K+Q
Sbjct: 122 SVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDA 181
Query: 182 IKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKD 214
IKD + + + +V+ +HD L R + LKD
Sbjct: 182 IKDEMKKRELSVLVNIHDPNLVARHSTHVVMLKD 215
>pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyrococcus abyssi
(strain Orsay) >gi|5457948|emb|CAB49438.1| (AJ248284)
ABC TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 260
Score = 136 bits (340), Expect = 2e-31
Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 13/255 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKV 65
VIE NL Y+ + G+ F + +GE L++LGPNGAGKTTLLR +AG+ +G + V
Sbjct: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKILV 63
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
FGKS E+ + +AYVPQ F L V D V +G GL E ++R
Sbjct: 64 FGKS-----PSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
Query: 123 ALKL---LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
L++ L ++E + + LSGG+ Q+V IARA+ ++LLDEP + LDPK++I+
Sbjct: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
Query: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGIS 238
+ + + G T+I HD+ + G+K + + V + L D ++ + YG +
Sbjct: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDRKLVAFGSPEEVLRDEIIGKVYGPA 238
Query: 239 VKVAKLGREIVPLVG 253
K ++G + ++G
Sbjct: 239 SKAVRVGERLYCIIG 253
>gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica]
Length = 272
Score = 135 bits (337), Expect = 4e-31
Identities = 78/210 (37%), Positives = 126/210 (59%), Gaps = 5/210 (2%)
Query: 13 LEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIR 71
L Y+GK + ++ + +GEF VI+GPN GK+TLLR ++ +LK + G V + GK+I
Sbjct: 19 LTLGYDGKIISENLSVAIPDGEFTVIVGPNACGKSTLLRALSRLLKPQAGQVILDGKNIA 78
Query: 72 DMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLLR 128
++ +A+ L +PQ + P + V D V GR P+ L + + D +AV A++
Sbjct: 79 SLDTRHVARHLGLLPQSSQAPDGISVLDLVARGRYPHQKLLQQWTQADKQAVSDAMQATG 138
Query: 129 VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE 188
V E DR + LSGG+ Q+V IA +AQ+TP++LLDEPT LD QID++ + +L +
Sbjct: 139 VSELADRSVDALSGGQRQRVWIAMVLAQQTPLLLLDEPTTYLDIAHQIDLLELFSNLNQQ 198
Query: 189 -GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
T++ V+HDL A R+ + ++DG++
Sbjct: 199 HNHTLVAVLHDLNHACRYATHIIAMRDGKI 228
>gi|10957444 hemin ABC transporter, ATP-binding protein [Deinococcus
radiodurans] >gi|7472005|pir||H75619 hemin ABC
transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460873|gb|AAF12577.1|AE001826_46 (AE001826) hemin
ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 261
Score = 135 bits (337), Expect = 4e-31
Identities = 86/216 (39%), Positives = 125/216 (57%), Gaps = 8/216 (3%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
I V++L +S G+ +L + F + GE L +LG NGAGK+TLL+ + G L K V++FG
Sbjct: 8 IRVTDLSYSVAGRELLSKLKFHLQSGEMLAVLGRNGAGKSTLLKHLTGELG-KSGVELFG 66
Query: 68 KSIRDMNRLELAKLLAYVPQRVEPGFL-RVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
+ +RD+ E AK A +PQ+ F V D VLLGR P+ G +D L+
Sbjct: 67 QPLRDIKPAEAAKRRAVLPQQTPLSFAYEVLDVVLLGRIPH-GQRETVQDRAIAAACLER 125
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVI-----LLDEPTNNLDPKSQIDVMRI 181
+ + +E R + TLSGGE Q+V AR +AQ VI LLDEPT +LD Q +R+
Sbjct: 126 VGLSGYETRDVLTLSGGEQQRVHFARTLAQLHGVIGERVLLLDEPTASLDLAHQHATLRL 185
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++L EG V+ V+HDL LA ++ ++ L L +G V
Sbjct: 186 ARELCREGVGVLAVLHDLNLAAQYADRVLMLAEGHV 221
>pir||D82281 ferric vibriobactin ABC transporter, ATP-binding protein VC0779
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655227|gb|AAF93944.1| (AE004163) ferric
vibriobactin ABC transporter, ATP-binding protein
[Vibrio cholerae]
Length = 279
Score = 134 bits (335), Expect = 8e-31
Identities = 79/222 (35%), Positives = 128/222 (57%), Gaps = 5/222 (2%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
+K + ++ L Y GK+V ++ + G+F VI+GPNG GK+TLL+ + +LK
Sbjct: 14 LKAEHHRLKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPL 73
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--RED 116
G V + G++I + +AK L +PQ + P ++V D V GR P+ GL + R D
Sbjct: 74 AGQVLLDGQNIHQLPTKVVAKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLFRQWSRVD 133
Query: 117 LEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI 176
AV A++ V E + LSGG+ Q+V +A A+AQ+TP +LLDEPT LD QI
Sbjct: 134 ERAVEEAMRATHVHELAQHSVDQLSGGQRQRVWVAMALAQQTPYLLLDEPTTYLDIAHQI 193
Query: 177 DVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+++ + L +G T++ V+HDL A R+ + + L++G++
Sbjct: 194 ELLDLFWRLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKI 235
>dbj|BAB05108.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 250
Score = 134 bits (335), Expect = 8e-31
Identities = 80/234 (34%), Positives = 132/234 (56%), Gaps = 10/234 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
V++V NL Y ++ + F G G+ + ILGPNGAGK+TL++ I G+ + G VKV
Sbjct: 4 VVKVDNLSVFYEQHQAIKNIRFQAGPGQMIGILGPNGAGKSTLMKAILGLERYTGTVKVL 63
Query: 67 GKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVR 121
K +R + K +AYVPQR ++ F + V D V++GR ++ R + D V
Sbjct: 64 DKHVRHVR-----KQIAYVPQRNAIDWDFPVLVEDVVMMGRFAHIPWFKRAGKNDKRLVE 118
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
+LK + +EE+ R + LSGG+ Q+V IARA+AQE+ + LDEP +D S+ ++ +
Sbjct: 119 ESLKKVGMEEYRSRQIGELSGGQQQRVFIARALAQESELFFLDEPFVGIDVTSESIILSL 178
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY 235
+++L GKT+ V HDL+ ++ ++ L L + D ++++TY
Sbjct: 179 LQELRDRGKTIFVVHHDLSKVEKYFDQVLMLNKELIAYGPVADVYTPEMVAKTY 232
>sp|P15031|FECE_ECOLI IRON(III) DICITRATE TRANSPORT ATP-BINDING PROTEIN FECE
>gi|72451|pir||QRECM3 membrane-bound iron(III) dicitrate
transport protein - Escherichia coli
>gi|145928|gb|AAA23765.1| (M26397) fecE [Escherichia
coli] >gi|537128|gb|AAA97183.1| (U14003) fecE gene
product [Escherichia coli] >gi|1790739|gb|AAC77243.1|
(AE000499) ATP-binding component of citrate-dependent
iron(III) transport protein [Escherichia coli K12]
Length = 255
Score = 134 bits (335), Expect = 8e-31
Identities = 78/223 (34%), Positives = 124/223 (54%), Gaps = 4/223 (1%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
+ NL SY VL V+ + G+ ++GPNG GK+TLL C + +L + G
Sbjct: 3 LRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLG 62
Query: 68 KS-IRDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRA 123
+ I ++ +LA+ L+ +PQ + P + V + V GR P++ L R ED V A
Sbjct: 63 DNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVNVA 122
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
+ R+ R + LSGG+ Q+ +A +AQ TPV+LLDEPT LD Q+D+MR++
Sbjct: 123 MNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVVLLDEPTTYLDINHQVDLMRLMG 182
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+L +GKTV+ V+HDL A R+ ++ + + +G V T +E+
Sbjct: 183 ELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEEV 225
>dbj|BAB04746.1| (AP001510) ferrichrome ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 252
Score = 134 bits (335), Expect = 8e-31
Identities = 79/239 (33%), Positives = 136/239 (56%), Gaps = 4/239 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
++++ + Y K V+ V+ + +G+ +GPNGAGK+TLL ++ +LK G + +
Sbjct: 1 MVDIQQVTKQYGEKLVIDDVSVCIPQGKITSFIGPNGAGKSTLLSMVSRLLKKDAGQILI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
+ + ELAK L+ + Q L V D V GR PY + +ED + A+
Sbjct: 61 DQHEVTQYDSRELAKKLSILKQANTINIRLTVKDLVSFGRFPYSQGALTKEDHRLIDEAI 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+ + + + EDR + LSGG+ Q+ IA IAQ+T +LLDEP NNLD K + +M++++
Sbjct: 121 RYMDLTDLEDRYLDQLSGGQKQRAFIAMVIAQDTDYVLLDEPLNNLDMKHSVQIMKVLRQ 180
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR-VLSETYGISVKV 241
++ E GKTV+ V+HD+ A + + + LK+G+V ++E+ DR L + Y + ++V
Sbjct: 181 MVEELGKTVVIVLHDINFASCYLDYIVALKNGKVVRQGPKNEIIDREALRDIYDMDMEV 239
>pir||T36888 probable iron-siderophore uptake system ATP-binding component -
Streptomyces coelicolor >gi|5738501|emb|CAB52849.1|
(AL109848) putative iron-siderophore uptake system
ATP-binding component [Streptomyces coelicolor A3(2)]
Length = 301
Score = 134 bits (333), Expect = 1e-30
Identities = 83/254 (32%), Positives = 143/254 (55%), Gaps = 6/254 (2%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDV 63
V + N+ +Y+ + + ++ ++ + F VI+GPN GK+TLLR ++ +L+ +G V
Sbjct: 20 VNRLTAENVTLAYDQRVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRV 79
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAV 120
+ G I+ M ++A+ L +PQ + P + V D V GR P+ G+ + ED V
Sbjct: 80 LLDGSVIQSMPAKQVARTLGLLPQSSIAPDGITVGDLVGRGRYPHQGILRQWSTEDERVV 139
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+ ++ + E DR + LSGG+ Q+V IA A+AQ+TP++LLDEPT LD + QIDV+
Sbjct: 140 QESMARTGISELADRYVDELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLD 199
Query: 181 IIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGIS 238
+ +L E G+T++ V+HDL A R+ + L++G+V +D + ++ +G+
Sbjct: 200 LCAELHEEQGRTLVAVLHDLNHAARYATHLIALREGQVIAEGAPKDIVTADLVERVFGLR 259
Query: 239 VKVAKLGREIVPLV 252
+V PLV
Sbjct: 260 CQVIDDPETGTPLV 273
>gb|AAD48883.1| (U52150) ATPase [Vibrio cholerae]
Length = 279
Score = 133 bits (331), Expect = 2e-30
Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 5/222 (2%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
+K + ++ L Y GK+V ++ + G+F VI+GPNG GK+TLL+ + +LK
Sbjct: 14 LKAEHHRLKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPL 73
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--RED 116
G V + G++I + +AK L +PQ + P ++V D V GR P+ GL + R D
Sbjct: 74 AGQVLLDGQNIHQLPTKVVAKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLFRQWSRVD 133
Query: 117 LEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI 176
AV A++ V E + LSGG+ Q+V +A +AQ+TP +LLDEPT LD QI
Sbjct: 134 ERAVEEAMRATHVHELAQHSVDQLSGGQRQRVWVAMGLAQQTPYLLLDEPTTYLDIAHQI 193
Query: 177 DVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+++ + L +G T++ V+HDL A R+ + + L++G++
Sbjct: 194 ELLDLFWRLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKI 235
>pir||T03482 iron(iii) dicitrate transport ATP-binding protein - Rhodobacter
capsulatus >gi|3128283|gb|AAC16135.1| (AF010496)
iron(iii) dicitrate transport ATP-binding protein
[Rhodobacter capsulatus]
Length = 255
Score = 133 bits (331), Expect = 2e-30
Identities = 95/249 (38%), Positives = 141/249 (56%), Gaps = 13/249 (5%)
Query: 7 VIEVSNLEFSYNGK-NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAG-ILKCKGDVK 64
++++S + + G+ ++L ++F V EG+ L I G GAGKT LLR I I +G V+
Sbjct: 1 MVDLSGVFWGPKGQPDLLSDISFAVPEGQSLAICGAKGAGKTALLRLICRQIAPNRGTVR 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYM-----GLS-PRREDL 117
+ G+ + M+ E A++LA V Q F L V V LGR P+ GL+ P D
Sbjct: 61 LLGRDLWLMSAPEAARVLAAVLQEQPGEFGLTVRQIVALGRLPHRRGWGAGLATPDGADA 120
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
V+ AL L + R TLSGGE Q+V IARA+AQE VI+LDEPT LD +S++D
Sbjct: 121 TLVQAALDRLELTALASRPFATLSGGERQRVMIARALAQEPRVIVLDEPTPPLDIRSRLD 180
Query: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRD-ELEDRVLSETYG 236
++ ++K G G TVIT +HDLTLA F ++ L L +G + D L + VL+ +
Sbjct: 181 LLALLK---GLGLTVITALHDLTLAADFADRVLVLHEGRLLADGPPDTALTETVLARAFR 237
Query: 237 ISVKVAKLG 245
+ ++ + G
Sbjct: 238 VQARIDRSG 246
>pir||C83126 ferric enterobactin transport protein FepC PA4158 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9950365|gb|AAG07545.1|AE004832_5 (AE004832) ferric
enterobactin transport protein FepC [Pseudomonas
aeruginosa]
Length = 265
Score = 132 bits (329), Expect = 4e-30
Identities = 78/227 (34%), Positives = 130/227 (56%), Gaps = 9/227 (3%)
Query: 18 NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRL 76
+ + V R ++ + EG F VI+GPN GK+TLL ++ +L +G V + G+ I +
Sbjct: 15 DARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGR 74
Query: 77 ELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGL----SPRREDLEAVRRALKLLRVEE 131
E+A+ L +PQ + P + V + V GR P+ SP E AV AL+ RV+
Sbjct: 75 EVARRLGLLPQSALAPDGITVAELVARGRYPHQSFLRQWSPADE--RAVAAALRATRVDG 132
Query: 132 FEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKT 191
+R + LSGG+ Q+V IA +AQETP++LLDEPT LD QI+++ ++ +L +G+T
Sbjct: 133 LAERPLDALSGGQRQRVWIAMVLAQETPLLLLDEPTTYLDIVHQIELLELLAELNRQGRT 192
Query: 192 VITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL-EDRVLSETYGI 237
++ V+HDL A R+ + ++DG + + +R++ E +G+
Sbjct: 193 IVAVLHDLNQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGL 239
>pir||B71234 probable transport protein - Pyrococcus horikoshii
>gi|3256518|dbj|BAA29201.1| (AP000001) 260aa long
hypothetical transport protein [Pyrococcus horikoshii]
Length = 260
Score = 132 bits (328), Expect = 5e-30
Identities = 84/215 (39%), Positives = 132/215 (61%), Gaps = 7/215 (3%)
Query: 7 VIEVSNLEFSYN-GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVK 64
+IE ++ F Y GK VL+ ++F EG L I+GPNG+GKTTL++ + G+LK K G+V
Sbjct: 1 MIEFRDVWFWYQEGKTVLKSISFSFSEGT-LAIVGPNGSGKTTLVKMLNGLLKPKKGNVL 59
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLEAVRR 122
+ G + ++++ EL++++ YV Q + F VF V G + +GL+ E + VR
Sbjct: 60 IDGINTKEVSVAELSRIVGYVFQNPDAMFFEENVFKEVAFGPKN-LGLN-EEEVKKRVRW 117
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL+ + + FE+R LSGGE Q++AIA +A + ++LDEP LD + D++ +I
Sbjct: 118 ALEAVGLRGFENRNPFELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLQDLINVI 177
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
K+L EG ++I V HD+ L L +K L LKDGE+
Sbjct: 178 KNLRREGSSIILVTHDIELVLEVADKVLLLKDGEL 212
>gb|AAD33527.2|AF132117_4 (AF132117) FhuA [Staphylococcus aureus]
>gi|9755013|gb|AAF98153.1|AF251216_1 (AF251216) FhuC
[Staphylococcus aureus]
Length = 265
Score = 132 bits (328), Expect = 5e-30
Identities = 81/247 (32%), Positives = 143/247 (57%), Gaps = 8/247 (3%)
Query: 13 LEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIR 71
++ Y ++ ++ ++ +G+ I+GPNG GK+TLL+ ++ +L K G+V + G++I
Sbjct: 9 VKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKSTLLKALSRLLAVKEGEVFLDGENIH 68
Query: 72 DMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLLR 128
+ E+AK +A +PQ E L V + V GR P+ R ED + + A+++
Sbjct: 69 TQSTKEIAKKIAILPQSPEVADGLTVGELVSYGRFPHQKGFGRLTAEDKKEIDWAMEVTG 128
Query: 129 VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE 188
+ F R + LSGG+ Q+V IA A+AQ T +I LDEPT LD Q++++ +++ L E
Sbjct: 129 TDTFRHRSINDLSGGQRQRVWIAMALAQRTDIIFLDEPTTYLDICHQLEILELVQKLNQE 188
Query: 189 -GKTVITVMHDLTLALRFGEKFLFLKDGEV--TGIMTRDELEDRVLSETYGISVKVAKLG 245
G T++ V+HD+ A+RF + + +K+G++ TG T D L +L + + I V ++K
Sbjct: 189 QGCTIVMVLHDINQAIRFSDHLIAMKEGDIIATG-STEDVLTQEILEKVFNIDVVLSKDP 247
Query: 246 REIVPLV 252
+ PL+
Sbjct: 248 KTGKPLL 254
>pir||F83058 probable ATP-binding component of ABC transporter PA4706 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|3044094|gb|AAC13285.1| (AF055999) ATPase component
[Pseudomonas aeruginosa]
>gi|9950964|gb|AAG08092.1|AE004884_10 (AE004884)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 255
Score = 131 bits (327), Expect = 7e-30
Identities = 90/256 (35%), Positives = 134/256 (52%), Gaps = 10/256 (3%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
++ V NL GK VL G+ ++ GE L +LGPNGAGK+TLL + G L+ +G V +
Sbjct: 1 MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLLGALCGELEPAEGLVLL 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVL-LGRRPYMGLSPRREDLEAVRRAL 124
+ + D + A+ LA +PQ GF + V+ GR P+ S R D++ V AL
Sbjct: 61 DERGLDDWPGVARAQRLAVLPQSSSLGFAFPVEAVVGFGRLPHS--SGRERDVQIVAEAL 118
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETP-----VILLDEPTNNLDPKSQIDVM 179
R LSGGE Q+V +AR +AQ P V+LLDEPT+ LDP Q +
Sbjct: 119 AAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVLLLDEPTSALDPLHQHTTL 178
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGIS 238
+ + D G +V+ ++HDL LA R+ ++ L L++G + T +E L L +G+
Sbjct: 179 QAVHDFARRGASVLVILHDLNLAARYCDRLLLLQNGRPHLLGTPEEVLRPEPLRAVFGLE 238
Query: 239 VKVAKLGREIVPLVGA 254
V V + PL+ A
Sbjct: 239 VLVQRHPERGHPLIVA 254
>pir||E70046 iron transport system homolog yvrA - Bacillus subtilis
>gi|2635813|emb|CAB15306.1| (Z99120) similar to iron
transport system [Bacillus subtilis]
>gi|2635829|emb|CAB15321.1| (Z99121) similar to iron
transport system [Bacillus subtilis]
>gi|2832813|emb|CAA11737.1| (AJ223978) putative metal
binding protein, YvrA [Bacillus subtilis]
Length = 442
Score = 131 bits (327), Expect = 7e-30
Identities = 83/214 (38%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
++ L Y ++ V+ V +GEFL ILGPNG+GKTTLL + G L K G V +
Sbjct: 1 MKAEGLSGGYGDSRLINNVSLTVEKGEFLGILGPNGSGKTTLLHLLTGTLPAKKGRVYLA 60
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYM-GLSPRR-EDLEA-VRR 122
GK + D ELA+++A +PQ+++ F V + V GR P+ GL ++ E EA V+
Sbjct: 61 GKLLADYKPKELAQIMAVLPQKMDQAFTFTVEETVAFGRYPFQTGLFRQQTEKGEAIVQE 120
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
A++ V +F + ++ LSGGE Q+V +A+A+AQ+ ++ LDEPTN LD Q D++ +I
Sbjct: 121 AMEQTGVADFAQKPIRELSGGEQQRVYLAQALAQQPRILFLDEPTNFLDLAYQKDLLDLI 180
Query: 183 KDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDG 215
K L E G ++V HDL A + + +F+K+G
Sbjct: 181 KRLTRESGLAAVSVFHDLNTASLYCDGLMFMKNG 214
>pir||S74440 iron(III) dicitrate transport system permease protein fecE -
Synechocystis sp. (strain PCC 6803)
>gi|1651664|dbj|BAA16592.1| (D90899) iron(III) dicitrate
transport system permease protein FecE [Synechocystis
sp.]
Length = 268
Score = 131 bits (327), Expect = 7e-30
Identities = 77/210 (36%), Positives = 128/210 (60%), Gaps = 5/210 (2%)
Query: 13 LEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGD-VKVFGKSIR 71
L +Y+ +++G++ + +GE ++GPNG GK+TLLR +A +LK +G V + G++I
Sbjct: 15 LSLAYDSHLIIQGLDLAINQGEITTLVGPNGCGKSTLLRGMARLLKPQGGTVYLEGEAIA 74
Query: 72 DMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLLR 128
+ ELAK L +PQ P L V + V GR P+ + ++D V A+
Sbjct: 75 HLPTKELAKRLGILPQSPPAPEGLTVRELVAQGRYPHQNWLQQWSKQDELKVEEAIATTD 134
Query: 129 VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE 188
+ +F +R + +LSGG+ Q+ IA A+AQ+T ++LLDEPT LD QI+V+ ++ L E
Sbjct: 135 LHQFANRPLDSLSGGQRQRAWIAMALAQDTEILLLDEPTTYLDLAHQIEVLDLLHWLNRE 194
Query: 189 -GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
G+T++ V+HDL LA R+ + + L+DG++
Sbjct: 195 AGRTIVMVLHDLNLACRYSHRLIALRDGKL 224
>pir||F81431 ABC transporter ATP-binding protein Cj0142c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967636|emb|CAB72626.1| (AL139074) ABC transporter
ATP-binding protein [Campylobacter jejuni]
Length = 284
Score = 131 bits (326), Expect = 9e-30
Identities = 77/232 (33%), Positives = 131/232 (56%), Gaps = 15/232 (6%)
Query: 9 EVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFGK 68
E+SNL ++Y+ + +L+ +N +FL I+GPNGAGK+TL++ I G+LK K ++
Sbjct: 5 EISNLNYAYDNEIILKNINLSYDNKDFLSIIGPNGAGKSTLVKLILGLLKSKNEIH---- 60
Query: 69 SIRDMNRLELAKLLAYVPQRV--EPGFL-RVFDFVLLG--RRPYMGLSPRREDLEAVRRA 123
+ + R E+ YVPQ P F RV + VL+G + G ++ D E +A
Sbjct: 61 -FKALQRKEIG----YVPQHTLANPNFCPRVLEIVLMGLVSKKIFGFYGKK-DKEKAMQA 114
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
LK + +E+F ++ + +LSGG+ Q+V IARA+A E +++LDEPT ++D KS I + ++
Sbjct: 115 LKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTASVDNKSAIQIFELLI 174
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY 235
L +G ++ + HD+ L L + +K L T+++ + L Y
Sbjct: 175 SLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEKSSFLKHLY 226
>emb|CAA07722.1| (AJ007906) FhuC [Rhizobium leguminosarum]
Length = 268
Score = 131 bits (326), Expect = 9e-30
Identities = 84/236 (35%), Positives = 128/236 (53%), Gaps = 6/236 (2%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAG-ILKCKGDVKVFGKSI 70
N+ G +LR V+ GE + ++G NG+GK++LL+ +A ++ G + + +
Sbjct: 19 NIGLLIEGNEILRDVSLKFPAGEVVALVGHNGSGKSSLLKMLARQLVPSAGSISYGNRDL 78
Query: 71 RDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLL 127
R A+ +AY+PQ V G + V + V GR P+ G R + D V AL+
Sbjct: 79 RTYGERVFARSVAYLPQDVTTGSEMTVRELVGCGRYPWHGALGRFTKNDEGKVEEALRAT 138
Query: 128 RVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIG 187
+E+F DR++ TLSGGE Q+ IA IAQ+ +LLDEPT LD QI+V+ +++ L
Sbjct: 139 YIEKFADRIVGTLSGGERQRAWIAMLIAQDARCLLLDEPTAALDVAHQIEVLSLVRRLAH 198
Query: 188 E-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKV 241
E G +V+ V+HD+ +A RF ++ LK G V T L L E YGI + V
Sbjct: 199 ELGSSVVIVLHDINMAARFCDRIHALKRGRVVASGTASAILAPNTLQEIYGIDMDV 254
>pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB - Bacillus
subtilis >gi|2293152|gb|AAC00230.1| (AF008220) putative
transporter [Bacillus subtilis]
>gi|2635560|emb|CAB15054.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 250
Score = 131 bits (325), Expect = 1e-29
Identities = 78/235 (33%), Positives = 133/235 (56%), Gaps = 11/235 (4%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKGDVKVF 66
+E+ N+ +Y+ K VL+ ++ V EG+ + I+GPNGAGK+TL++ I G++ + GD+ ++
Sbjct: 4 VELDNVTVAYHKKPVLQDISLQVPEGKLIGIIGPNGAGKSTLIKTILGLVPRASGDISIY 63
Query: 67 GKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAVR 121
GK +D + YVPQR V+ F D VL+GR +GL P++ D+E +
Sbjct: 64 GKDYKDQRTR-----IGYVPQRGSVDWDFPTSPLDVVLMGRYGRIGLLKRPKKADVEMAK 118
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
AL + + ++ R + LSGG+ Q+V +ARA+ Q + +DEP +D ++ +M +
Sbjct: 119 AALTKVGMHDYAKRQISQLSGGQQQRVFLARALCQNADIYFMDEPFAGVDAATERAIMTL 178
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
+ +L +GKTV+ V HDL A + + L L ++ T + L +TYG
Sbjct: 179 LAELKEKGKTVLVVHHDLQTAEDYFDWILLLHLRKIAFGPTENVFTIENLQKTYG 233
>pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) PAB2260 -
Pyrococcus abyssi (strain Orsay)
>gi|5457563|emb|CAB49054.1| (AJ248283) cobalt ABC
transporter, ATP-binding protein (cbiO) [Pyrococcus
abyssi]
Length = 260
Score = 130 bits (324), Expect = 1e-29
Identities = 85/215 (39%), Positives = 130/215 (59%), Gaps = 7/215 (3%)
Query: 7 VIEVSNLEFSYN-GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVK 64
+IE ++ F Y+ GK VL+ +NF +G L I+GPNG+GKTTL++ + G+LK K GDV
Sbjct: 1 MIEFKDVWFWYDDGKYVLKSINFRF-KGGTLAIVGPNGSGKTTLVKMMNGLLKPKKGDVI 59
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLEAVRR 122
+ G + RD + E+++L+ YV Q + F VF V G R +GLS + + VR
Sbjct: 60 IDGINTRDKSVAEMSRLVGYVFQNPDAMFFEENVFKEVAFGPRN-LGLSEEEVE-KRVRW 117
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL+ + +E FEDR LSGGE Q++AIA +A + ++LDEP LD + ++ +I
Sbjct: 118 ALREVGLEGFEDRSPLELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLRGLINVI 177
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ L + ++I V HD+ L L ++ L LKDGE+
Sbjct: 178 RKLREDNHSIILVTHDMELVLEVADEVLLLKDGEI 212
>pir||T44799 iron transport ATP-binding protein irp1D [imported] -
Corynebacterium diphtheriae
>gi|5823378|gb|AAD53128.1|AF176902_3 (AF176902) IRP1D
[Corynebacterium diphtheriae]
Length = 283
Score = 130 bits (323), Expect = 2e-29
Identities = 89/258 (34%), Positives = 138/258 (52%), Gaps = 17/258 (6%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSI 70
+L Y +++ V G+ I+GPNG GK+T LR +A +++ G V++ GK +
Sbjct: 23 SLSSGYGVDPIVKDVTLSFESGKITSIVGPNGCGKSTFLRTLARLIRPTAGSVELNGKPL 82
Query: 71 RDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLL 127
+ ELAK L +PQ VEP + V D V R + R D + V A+
Sbjct: 83 GAYSSRELAKRLGLLPQTPVEPDGITVADLVGEAARLTREILGRWTASDYDIVAEAMAST 142
Query: 128 RVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL-I 186
+V E DR ++ LSGG+ Q+V IA A+AQ+T V+LLDEPT LD K Q++V+ ++ DL
Sbjct: 143 QVAELADRSIEELSGGQRQRVWIAMALAQQTDVLLLDEPTTYLDLKHQLEVLDLLTDLNQ 202
Query: 187 GEGKTVITVMHDLTLALRFGEKFLFLKDGEV------TGIMTRD------ELEDRVLSET 234
G T+I V+HDL LA R+ + + ++DG + ++T+D +LE V+++
Sbjct: 203 RRGTTIIMVLHDLNLAARYSDNLVAMRDGRLHSVGRPVDVLTQDLTREAFDLESLVITDP 262
Query: 235 YGISVKVAKLGREIVPLV 252
V +GR LV
Sbjct: 263 VSGLPTVTPIGRHHTQLV 280
>gb|AAD37495.1|AF109162_3 (AF109162) HmuV [Corynebacterium diphtheriae]
Length = 277
Score = 130 bits (323), Expect = 2e-29
Identities = 84/239 (35%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
++ V +L S K +L +NFD GE ++GPNGAGK+TLL ++G L+ + G + +
Sbjct: 6 LVRVRDLSVSVGQKRLLCDINFDAYAGEVTGLIGPNGAGKSTLLAALSGDLERQSGSIDI 65
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
G D + ELA++ + + Q V F V D V +GRRP+ G + D + AL
Sbjct: 66 CGLDPVDSSARELARVRSVMLQDVSVTFQFLVRDVVAMGRRPWEGTDRQEFDDRLIDAAL 125
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
R + TLSGGE +VA++R +AQ+TPV++LDEPT LD Q V+ +++
Sbjct: 126 SATDAAHLAGRDIVTLSGGERARVALSRVLAQQTPVVMLDEPTAALDISHQEQVLGLMQS 185
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKV 241
+ G VI V+HDL A + + + L DG + D D LS YG + V
Sbjct: 186 IARRTGIAVIVVLHDLNAAAAYCDHIVCLADGRIVADGSVADVYTDETLSSVYGWPIHV 244
>gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, ATP-binding subunit
[Methanococcus maripaludis]
Length = 243
Score = 129 bits (321), Expect = 3e-29
Identities = 77/216 (35%), Positives = 128/216 (58%), Gaps = 7/216 (3%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+IE+ N+ + +VL+GV+ V +GE LVI+GP+G+GK+TLLRCI G+ K +G +
Sbjct: 1 MIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFF 60
Query: 66 FGKSIRD----MNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
G I D +N++ + + + P L V D + R + +S ++E E R
Sbjct: 61 EGDDITDKKVNINKIRQKIGMVFQQFNLFP-HLTVLDNITFAPRKVLNVS-KKEAEELAR 118
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
LK + +E E++ LSGG+ Q+VAIARA+A + +L DEPT+ LDP+ +V+ +
Sbjct: 119 ELLKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVLDV 178
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+K L EG T++ V H++ A G++ +F+ DG++
Sbjct: 179 MKQLAYEGMTMVVVTHEMGFAKEVGDRLIFIDDGQI 214
>sp|Q57243|YC72_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1272
>gi|1074079|pir||F64113 ferric enterobactin transport
ATP-binding protein homolog HI1272 - Haemophilus
influenzae (strain Rd KW20) >gi|1574727|gb|AAC22920.1|
(U32807) ABC transporter, ATP-binding protein
[Haemophilus influenzae Rd]
Length = 263
Score = 129 bits (321), Expect = 3e-29
Identities = 77/215 (35%), Positives = 121/215 (55%), Gaps = 4/215 (1%)
Query: 2 KVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CK 60
+ K+ ++E NL Y GK +++ + F + E + +LG NGAGK+T L+ + G+
Sbjct: 6 RAKIMLLETQNLAIGYEGKTLVQHIQFTLEENQICCLLGANGAGKSTFLKTLLGLQPPIG 65
Query: 61 GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDL 117
GD+ GKS+ D + ELA+ +AYVPQ F V D V++GR ++ +P++ DL
Sbjct: 66 GDIVWQGKSLSDYSPTELARHIAYVPQAHSHLFPFLVQDMVMMGRSAFLKWYQTPKKSDL 125
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
+ AL+ L + R LSGGE Q V IARAIAQ+ ++++DEPT++LD +QI
Sbjct: 126 DLALMALQELEIAHLAQRYYHQLSGGEKQLVLIARAIAQQAKLLIMDEPTSSLDFGNQIR 185
Query: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFL 212
V+ IK L + +I H+ A G+ + L
Sbjct: 186 VLEKIKQLQKQNIALIISTHNPQQAAFLGDNIVLL 220
>pir||E69812 ferrichrome ABC transporter (ATP-binding p) homolog yfmF - Bacillus
subtilis >gi|2443249|dbj|BAA22320.1| (D86417) YfmF
[Bacillus subtilis] >gi|2633073|emb|CAB12578.1| (Z99108)
similar to ferrichrome ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 266
Score = 128 bits (319), Expect = 6e-29
Identities = 77/224 (34%), Positives = 129/224 (57%), Gaps = 5/224 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
+ L SY+ ++ GV+ + EG+ ++G NG GK+T+L+ +A ++ K G V +
Sbjct: 4 LAADQLTLSYDSTVIIDGVDLKIEEGKITALIGANGCGKSTILKSLARLMAPKSGTVLLE 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRA 123
GK I E+AK LA +PQ + P L V + GR P+ L + +ED + V A
Sbjct: 64 GKDIHRQPSKEVAKKLAILPQSPQAPEGLTVEELCYFGRHPHKKLLSKHTQEDHDMVEWA 123
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + E +DR + LSGG+ Q+ I+ A+AQ T ++LLDEPT LD QI+V+ ++K
Sbjct: 124 LEATGMIELKDRTLDALSGGQRQRAWISMALAQGTDLLLLDEPTTYLDISHQIEVLELLK 183
Query: 184 DLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
L + G+TV+ V+HDL A ++ + + + DG++ T +++
Sbjct: 184 KLNRDHGRTVVMVLHDLNQAAQYADYLISVLDGKIYNAGTPEDV 227
>emb|CAB94640.1| (AL359215) putative iron transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 258
Score = 128 bits (319), Expect = 6e-29
Identities = 80/235 (34%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
+EV L +G VL V+ G F+ ++GPNG+GK+TLLRC+ L+ G V++
Sbjct: 4 VEVDGLTVEMSGARVLDDVSLHADSGGFVGLVGPNGSGKSTLLRCVYRALRPTAGVVRLG 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRR--EDLEAVRRA 123
G + ++ E A+ LA +PQ F V + V +GR P+ G + R ED A A
Sbjct: 64 GDELPSLSPRESARRLAALPQEAAAEFDFTVAEVVAMGRLPHQGAAARTSDEDRHACAAA 123
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + + R TLSGGE Q+V IARA+AQ+ +++LDEPTN+LD Q++V+ +++
Sbjct: 124 LEGVGADHLTGRGFLTLSGGERQRVLIARALAQQPRILVLDEPTNHLDIAQQLEVLSLVR 183
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGI 237
G TV+ +HDL LA ++ + G + D L +L++ + +
Sbjct: 184 ---ASGPTVLAALHDLNLAALHCDRLHVVDGGRIVASGAPHDVLTAELLADVFKV 235
>pir||D69180 ABC transporter - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621685|gb|AAB85111.1| (AE000842) ABC
transporter [Methanobacterium thermoautotrophicum]
Length = 250
Score = 128 bits (318), Expect = 8e-29
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 11/201 (5%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
IE+ +L + NG+ +LR +N V GE L ++GPNG GKTTLLR I G +K +G V+V
Sbjct: 6 IEMEDLSYCINGREILRNINLKVPMGELLAVIGPNGGGKTTLLRLITGQIKPTRGTVRVL 65
Query: 67 GKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
G D + Y+PQR E F + + VL+G +P +D + RA
Sbjct: 66 GMKPEDSR-----SRIGYLPQRSHFETDFPINILQTVLIGTYRRFE-APTDDDRKKALRA 119
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
LK++ + E+ DR + LSGGELQ+V +ARA+ +E ++LLDEPT ++DP + RII
Sbjct: 120 LKMVGMLEYRDRKIGELSGGELQRVFLARALVREPDLLLLDEPTASVDPAFRGSFYRIID 179
Query: 184 DLIGEGKTVITVMHDLTLALR 204
+L E T++ V HD+ R
Sbjct: 180 ELRDE-MTIVIVSHDIGTVAR 199
>sp|P49938|FHUC_BACSU FERRICHROME TRANSPORT ATP-BINDING PROTEIN FHUC
>gi|7442508|pir||B69622 ferrichrome ABC transporter
(ATP-binding protein) fhuC - Bacillus subtilis
>gi|1070015|emb|CAA63645.1| (X93092) protein-dependent
[Bacillus subtilis] >gi|2635843|emb|CAB15335.1| (Z99121)
ferrichrome ABC transporter (ATP-binding protein)
[Bacillus subtilis] >gi|2832798|emb|CAA11722.1|
(AJ223978) ferrichrome transport protein, FhuC [Bacillus
subtilis]
Length = 269
Score = 127 bits (315), Expect = 2e-28
Identities = 75/215 (34%), Positives = 126/215 (57%), Gaps = 5/215 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
+ L Y + ++ +N + +G+ ++GPNG GK+T+L+ ++ I++ G V +
Sbjct: 4 LSTEQLGIGYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMSRIMRSHAGAVYLN 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPRR--EDLEAVRRA 123
GK+I M+ ++AK +A +PQ E P L V + V GR P+ R ED ++ A
Sbjct: 64 GKAIHKMSTKDIAKDMAILPQTPEAPSGLTVHELVSYGRFPHQSGFGRLNDEDRRIIKWA 123
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + E+ +R ++ LSGG+ Q+V IA A+AQ T ++LLDEPT LD Q+++++++
Sbjct: 124 LEETGMAEYAERPIEALSGGQRQRVWIAMALAQGTELLLLDEPTTYLDLAHQLEILQLLD 183
Query: 184 DLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
L E G+T++ V+HDL A RF + LK G V
Sbjct: 184 RLNKEQGRTILMVIHDLNHAARFSHYMIALKKGTV 218
>pir||T45470 ATP-binding ABC transport protein [imported] - Erysipelothrix
rhusiopathiae >gi|1335913|gb|AAB01157.1| (U52850)
unknown [Erysipelothrix rhusiopathiae]
Length = 246
Score = 127 bits (315), Expect = 2e-28
Identities = 79/206 (38%), Positives = 120/206 (57%), Gaps = 11/206 (5%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
M K IEV +L +Y+ K VL + +G+ I+GPNGAGK+T+++ I G+LK
Sbjct: 1 MAEKEYAIEVEDLTVTYDVKPVLWDCDVKFEKGKLTAIVGPNGAGKSTMIKAIMGLLKPI 60
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMGL--SPRR 114
G + + G+ +D K +AYVPQ V+ F V D VL+GR ++G PR+
Sbjct: 61 SGKITINGQHQKDEY-----KNIAYVPQSGSVDWDFPATVEDIVLMGRYGHIGWIKRPRK 115
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
ED E L+ + + + DR + LSGG+ Q+V +ARA+ Q+ + +LDEP +D K+
Sbjct: 116 EDREIANEMLERVGMSAYRDRQISQLSGGQQQRVFLARALTQQAEIYILDEPLKGVDVKT 175
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLT 200
+ +M ++K+L GKTVI V HDLT
Sbjct: 176 EEILMTLLKELAASGKTVIVVHHDLT 201
>gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-binding protein
[Escherichia coli]
Length = 318
Score = 126 bits (314), Expect = 2e-28
Identities = 81/243 (33%), Positives = 129/243 (52%), Gaps = 6/243 (2%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
M V + L Y V + ++ +G F I+GPNG GK+TLLR ++ ++
Sbjct: 48 MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA 107
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--RED 116
G V + G+ I+ E+A+ + + Q PG + V + V GR P+ L R +ED
Sbjct: 108 HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED 167
Query: 117 LEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI 176
EAV +A++ + D+ + TLSGG+ Q+ IA +AQET ++LLDEPT LD QI
Sbjct: 168 EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI 227
Query: 177 DVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE-T 234
D++ ++ +L E G T+ V+HDL A R+ + L++G++ E+ L E
Sbjct: 228 DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI 287
Query: 235 YGI 237
YG+
Sbjct: 288 YGL 290
>sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING PROTEIN FEPC
>gi|7442510|pir||B64792 ferric enterobactin ABC-type
transport system ATP-binding protein fepC [validated] -
Escherichia coli >gi|1786803|gb|AAC73689.1| (AE000164)
ATP-binding component of ferric enterobactin transport
[Escherichia coli K12]
Length = 271
Score = 126 bits (314), Expect = 2e-28
Identities = 81/243 (33%), Positives = 129/243 (52%), Gaps = 6/243 (2%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
M V + L Y V + ++ +G F I+GPNG GK+TLLR ++ ++
Sbjct: 1 MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA 60
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--RED 116
G V + G+ I+ E+A+ + + Q PG + V + V GR P+ L R +ED
Sbjct: 61 HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED 120
Query: 117 LEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI 176
EAV +A++ + D+ + TLSGG+ Q+ IA +AQET ++LLDEPT LD QI
Sbjct: 121 EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI 180
Query: 177 DVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE-T 234
D++ ++ +L E G T+ V+HDL A R+ + L++G++ E+ L E
Sbjct: 181 DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI 240
Query: 235 YGI 237
YG+
Sbjct: 241 YGL 243
>pir||S16298 ferric enterobactin transport protein fepC - Escherichia coli
>gi|41432|emb|CAA40709.1| (X57471) fepC [Escherichia
coli]
Length = 271
Score = 126 bits (313), Expect = 3e-28
Identities = 76/222 (34%), Positives = 122/222 (54%), Gaps = 5/222 (2%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
M V + L Y V + ++ +G F I+GPNG GK+TLLR ++ ++
Sbjct: 1 MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA 60
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--RED 116
G V + G+ I+ E+A+ + + Q PG + V + V GR P+ L R +ED
Sbjct: 61 HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED 120
Query: 117 LEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI 176
EAV +A++ + D+ + TLSGG+ Q+ IA +AQET ++LLDEPT LD QI
Sbjct: 121 EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI 180
Query: 177 DVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
D++ ++ +L E G T+ V+HDL A R+ + L++G++
Sbjct: 181 DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKI 222
>pir||A71357 probable ABC transporter, ATP-binding protein (troB) - syphilis
spirochete >gi|1777934|gb|AAC45726.1| (U55214) TroB
[Treponema pallidum] >gi|3322432|gb|AAC65154.1|
(AE001201) ABC transporter, ATP-binding protein (troB)
[Treponema pallidum]
Length = 266
Score = 125 bits (311), Expect = 5e-28
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 16/231 (6%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
++V +L +Y K VL V+ + EG I+GPNGAGK+TLL+ I G+L G+V+VF
Sbjct: 11 VQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVRVF 70
Query: 67 GKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMG--LSPRREDLEAVR 121
G+ R +AYVPQR V+ F VFD VL+G +G L P + + R
Sbjct: 71 GRPFSKERRR-----VAYVPQRSAVDWDFPTTVFDVVLMGSYGSLGWILRPGKREKARAR 125
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
A++ + + F DR + LSGG+ Q+V +ARA+ Q+ + +DEP +D ++ ++ +
Sbjct: 126 EAIEEVGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVDAATEQAIVTL 185
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLK-----DGEVTGIMTRDELE 227
+K L G GKT++ V HDL + ++ L L +G V T + ++
Sbjct: 186 LKTLKGRGKTLLVVHHDLQTVAEYFDRVLLLNVRVIAEGAVVSAFTEEYVQ 236
>dbj|BAB07014.1| (AP001518) ferrichrome ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 256
Score = 125 bits (311), Expect = 5e-28
Identities = 87/254 (34%), Positives = 145/254 (56%), Gaps = 10/254 (3%)
Query: 8 IEVSNLEFSYNGKNV-LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIA-GILKCKGDVKV 65
+++ L FSYN K L V V G+ I+GPNG+GK+TLL+ ++ + G + V
Sbjct: 1 MDIRELTFSYNQKVWHLDKVTATVKPGKVTTIIGPNGSGKSTLLQAMSRNLTPDGGQIIV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGL--SPRREDLEAVRR 122
G++I D + AK +A V Q+ + P + V V GR P+ L + + ED A+
Sbjct: 61 DGQAICDYSPKAFAKKIAVVHQQNIAPADITVEKLVSYGRIPHKRLFQNKKEEDQVAIDW 120
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL ++ E + ++ LSGGE Q+V IA A+AQ+TP++ LDEPT LD Q +++ ++
Sbjct: 121 ALSCTQLTEKRETLVHQLSGGERQRVWIAMALAQKTPILFLDEPTTYLDMYHQFEILELV 180
Query: 183 KDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMT-RDELEDRVLSETYGISVK 240
+ L + + T++ V+HDL A+R+ + L +K G++ T +D + +R + E Y + V
Sbjct: 181 QTLNRKHQMTIVMVLHDLNQAIRYSDHLLVMKQGKLFMQGTPKDVICERSVKEIYDVDVV 240
Query: 241 V---AKLGREIVPL 251
V ++ G IVP+
Sbjct: 241 VKEDSQTGLYIVPV 254
>gb|AAG20610.1| (AE005131) ferric enterobactin transport protein; FepC
[Halobacterium sp. NRC-1]
Length = 306
Score = 125 bits (310), Expect = 7e-28
Identities = 88/241 (36%), Positives = 130/241 (53%), Gaps = 14/241 (5%)
Query: 22 VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRLELAK 80
V+ G + V G+ ++GPNG+GK+TLL +A G V + G +I ++ ELA+
Sbjct: 35 VIDGESVTVPVGDVTALIGPNGSGKSTLLNALANKHSPADGTVLLDGHTIDELGSKELAR 94
Query: 81 LLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPRREDLE--AVRRALKLLRVEEFEDRVM 137
L + Q V PG + V + V GR P+ G D + AV AL++ V+ R +
Sbjct: 95 RLGLLSQENVTPGGISVRELVERGRYPHQGFFDSLTDADRAAVTDALRVAGVDHLSGRDV 154
Query: 138 KTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITVM 196
+LSGG+ Q V IA A+AQ+T V+LLDEPT LDP Q++VM II+ L + TV+ V+
Sbjct: 155 GSLSGGQKQLVWIAMALAQDTDVLLLDEPTTFLDPHHQLEVMDIIQALRDDHDTTVVVVL 214
Query: 197 HDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSET------YGISVKVAKLGREIVP 250
HD+ A R+ + + LKDG I R + D V ET +V G ++VP
Sbjct: 215 HDINQAARYADHVIALKDGT---IHARGQPADVVTKETLRTVFDIEATVSTTSHGMQVVP 271
Query: 251 L 251
+
Sbjct: 272 I 272
>gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus] >gi|7445658|pir||C69341 cobalt transport
ATP-binding protein (cbiO-1) homolog - Archaeoglobus
fulgidus >gi|2649880|gb|AAB90507.1| (AE001054) cobalt
transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus]
Length = 326
Score = 125 bits (310), Expect = 7e-28
Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
+IE +L F Y VL+GVNF G+ V++G NGAGKTTLL+ + G+L+ K G V +
Sbjct: 34 MIEAVDLHFCYGDAEVLKGVNFKAERGKVTVLMGRNGAGKTTLLKHLNGLLRPKSGKVII 93
Query: 66 FGKSIRDMNR--LELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLEAVR 121
G+ ++ + LE+ K + YV Q + L V+ V G R +GL R + VR
Sbjct: 94 DGRELKYDRKSLLEVRKRVFYVFQNPDDQILSPTVWQDVAFGPRN-LGLKGERLE-RVVR 151
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
AL+ + + +E R+ TLSGGE +++AIA A+A ++DEP+ N+D + + I
Sbjct: 152 NALEAVGLSGYEKRLCSTLSGGEKRRLAIASALAMNPDYCIMDEPSANVDGEGLRMIAEI 211
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
I+ L EGK V+ HD LA G+ F F+ DG++
Sbjct: 212 IRKLREEGKGVVVSTHDADLAKEVGDYFYFMDDGKI 247
>sp|P42360|YSC1_STRGC HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN SCAA 5'REGION
(ORF1) >gi|7445846|pir||T11549 ATP binding protein -
Streptococcus gordonii >gi|310631|gb|AAA71945.1|
(L11577) ATP binding protein [Streptococcus gordonii]
Length = 251
Score = 125 bits (310), Expect = 7e-28
Identities = 79/237 (33%), Positives = 130/237 (54%), Gaps = 10/237 (4%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+ +IE+ NL SY G+ L N + I+GPNGAGK+TL++ + GI+ +G
Sbjct: 11 IYMIEIQNLSVSYQGQLALDKANVTIKGPTITGIIGPNGAGKSTLIKGLLGIVDHQGQAL 70
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPRRE--DLEA 119
+ G+ + EL K +AYV Q++ + ++V + V LG P + L R + D +
Sbjct: 71 LDGQPLDK----EL-KRIAYVEQKINIDYNFPIKVKECVSLGLYPKIKLFQRLKTSDWDK 125
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V +ALK++ +E+F +R + LSGG+ Q+V IAR + QE I LDEP +D S+ +M
Sbjct: 126 VNQALKIVGLEDFAERQISQLSGGQFQRVLIARCLVQEADYIFLDEPFVGIDSVSEEIIM 185
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
+ ++ L +GKT++ V HDL+ + + ++ L L V T + +TYG
Sbjct: 186 KTLRQLRKDGKTILIVHHDLSKVVAYFDQVLLLNKKVVAFGSTESTFTKENMQQTYG 242
>pir||G81279 enterochelin uptake ATP-binding protein Cj1354 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968788|emb|CAB73781.1| (AL139078) enterochelin
uptake ATP-binding protein [Campylobacter jejuni]
Length = 251
Score = 124 bits (309), Expect = 9e-28
Identities = 71/247 (28%), Positives = 141/247 (56%), Gaps = 5/247 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+I++ N+ Y+ K ++ ++ D +G+ I+G NGAGK+TLL + ++K G++ +
Sbjct: 1 MIKLKNITKFYDNKVIISDLSLDFHKGKITSIIGANGAGKSTLLALASRLIKPSSGEIYI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
G ++++ LA+ ++ + Q+ L+V + V GR P+ D + AL
Sbjct: 61 DGMNLKNYKEQILAQKISILKQQNNINLRLKVEELVAFGRFPHSQGRLNTNDKIKINEAL 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+ + + + + TLSGG+ Q+ IA IAQ+T I+ DEP NNLD K + +M+++K+
Sbjct: 121 EYMELSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFDEPLNNLDMKHSVQIMQLMKN 180
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKVA 242
L+ + K++ V+HD+ A + ++ + LKDG++ ++DE + L + Y + + V+
Sbjct: 181 LVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQGSKDEIINQENLKQIYDMDIPVS 240
Query: 243 KL-GREI 248
++ G++I
Sbjct: 241 QINGKKI 247
>pir||B82891 ferrichrome transport ATP-binding protein UU435 [imported] -
Ureaplasma urealyticum
>gi|6899426|gb|AAF30847.1|AE002140_6 (AE002140)
ferrichrome transport ATP-binding protein [Ureaplasma
urealyticum]
Length = 387
Score = 124 bits (308), Expect = 1e-27
Identities = 80/287 (27%), Positives = 147/287 (50%), Gaps = 50/287 (17%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGD---- 62
+ +++N+ Y K +++ + + +F+V+LGPNG+GK+TL++ + I
Sbjct: 46 IFKLNNVSLGYGKKMIIKNLTATIHRNDFVVVLGPNGSGKSTLIKGLCRINNPSSGYIMY 105
Query: 63 ----------------------VKVFGKSIRDM-----------------NRLELAKLLA 83
V +F K +++ ELA LA
Sbjct: 106 RDKLISRPLLPFLWLEKAWSSIVNIFTKDRKEVIETIDWHIQNYKKIHAYKSKELALNLA 165
Query: 84 YVPQ-RVEPGFLRVFDFVLLGRRPY---MGLSPRRE-DLEAVRRALKLLRVEEFEDRVMK 138
YVPQ V P ++DFV +GR P +G++ E + + + ALK + + EF + ++
Sbjct: 166 YVPQLAVFPEATSIYDFVKMGRFPSSNALGINTNTEREKQIIDEALKNVGIYEFRHKNLE 225
Query: 139 TLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITVMH 197
LSGG+ QK IA A+AQ+T I+LDEPTN+LD +SQ++++ ++ L E KT++ V+H
Sbjct: 226 DLSGGQKQKALIALALAQDTETIVLDEPTNHLDIRSQLEIIELLHKLHHEMKKTIVLVIH 285
Query: 198 DLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKVAK 243
D+ L++ K + +K+GE+ ++ ++ +L + +G+ + K
Sbjct: 286 DINNGLKYAHKVMIMKNGEMVRYGKLKETIDHEILLDVFGVESIIVK 332
>emb|CAC14366.1| (AL445963) Fe uptake system permease [Streptomyces coelicolor]
Length = 272
Score = 124 bits (308), Expect = 1e-27
Identities = 85/248 (34%), Positives = 132/248 (52%), Gaps = 8/248 (3%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGK 68
+ + + ++ V+ GE + ++GPNG+GK++LLR + IL+ G V V G
Sbjct: 8 IDGVTLTAGAHRLVEDVSLTARPGEVIGLVGPNGSGKSSLLRAVYRILRPTTGQVSVDGT 67
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAVRRALK 125
+ +LA+ +A V Q F L V + V +GR P+ L ED +R AL
Sbjct: 68 DAWSLPVRQLARTVAAVVQESGAEFELTVREVVAMGRTPHKRLLDGDTAEDAGLIRSALT 127
Query: 126 LLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL 185
+ + R LSGGE Q+V IARA+AQ+ +++LDEPTN+LD + Q+DV+ ++ L
Sbjct: 128 AVDATDLAHRPFDQLSGGERQRVLIARALAQQPSLLVLDEPTNHLDIRHQLDVLGALRRL 187
Query: 186 IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKVAKL 244
TV+ +HDL LA + ++ L DG+VT D L ++LSE YG++ +V
Sbjct: 188 ---PATVLVALHDLNLAAYYCDRLYVLCDGKVTAAGPPADILTSQLLSEVYGVTSEVTIH 244
Query: 245 GREIVPLV 252
R P V
Sbjct: 245 PRTGAPQV 252
>emb|CAB92552.1| (AJ275980) FecE protein [Serratia sp. ATCC39006]
Length = 253
Score = 124 bits (308), Expect = 1e-27
Identities = 85/253 (33%), Positives = 140/253 (54%), Gaps = 17/253 (6%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKVF 66
I N+ ++ K ++ V+ V GE + ++GPNG GK++LLR +AG+ + G V +
Sbjct: 3 ITAENITWTVGKKTIVNNVSLSVSRGETVGLIGPNGCGKSSLLRILAGLRRPHSGTVTLD 62
Query: 67 GKSIRDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGR----RPYMGLSPRREDLEAVR 121
G++I + + +LA+ +A+V Q + +RV D V LGR P+ SP+ +D V
Sbjct: 63 GQNIARIAKKQLARRVAFVEQHGMTEANMRVVDVVKLGRIPHHSPFSNWSPQDDD--TVT 120
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
AL+ + + ++ +LSGGE Q+V IARAIAQ ILLDEPTN+LD QI +M++
Sbjct: 121 AALQRVDMLSKSEQGWLSLSGGERQRVHIARAIAQSPTEILLDEPTNHLDIHHQIQLMKL 180
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVK 240
+ +L T I +HDL A F + + ++ G++ + L + +L + +G+ K
Sbjct: 181 VSEL---PVTSIVAIHDLNHASMFCDALIVMQQGQIVAAGSPQVILTESLLWDVFGVETK 237
Query: 241 VAKLGREIVPLVG 253
+ EI P G
Sbjct: 238 I-----EISPFHG 245
>gb|AAK42217.1| ABC transporter [Sulfolobus solfataricus]
Length = 530
Score = 124 bits (308), Expect = 1e-27
Identities = 70/235 (29%), Positives = 132/235 (55%), Gaps = 12/235 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGV--NFDVGEGEFLVILGPNGAGKTTLLRCIAGIL----- 57
+K +E+ +L+ +Y GK+ V D+ EGE ++I G +G+GK+TL+ I G++
Sbjct: 1 MKFVEIRDLQVTYMGKDKPSIVVDKLDIEEGESVLITGRSGSGKSTLVSVINGVIPHLIN 60
Query: 58 -KCKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRR 114
+ KG+V+VFG ++ E++K + + Q + + D V G YM R
Sbjct: 61 AEIKGEVRVFGFDVKSTPIHEISKYVGTLLQDPDTQAFNYTIIDEVAFGVENYM--ISRD 118
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
E +E V ++K+ + DR + TLSGGELQ+ +A +A ++LDEPT+N+DP+
Sbjct: 119 EMIERVEESMKIYGISHLRDREINTLSGGELQRTILASVLAMRPKALILDEPTSNIDPQG 178
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
+++ ++K EG +++ V H + L F ++ + +++G++ + +DE+ D+
Sbjct: 179 TREILELVKTFRSEGISLVLVEHKIERVLPFVDRIIVVEEGKIAVDVRKDEIVDK 233
Score = 77.3 bits (187), Expect = 2e-13
Identities = 54/197 (27%), Positives = 95/197 (47%), Gaps = 19/197 (9%)
Query: 32 EGEFLVILGPNGAGKTTLLRCIAGILKCKG------DVKVFGKSIRDMNRLELAKLLAYV 85
+G ++G NG+GKTTLL+ I G++ K V V G + +E K +AY+
Sbjct: 306 QGTITALMGKNGSGKTTLLKVIVGLIDKKRLIVEEEKVIVNGVDLSKTKLVERGKFIAYL 365
Query: 86 PQRVEPGFLR-----VFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMKTL 140
PQ + F++ F + R Y D + + LK+ ++ + L
Sbjct: 366 PQFFDVMFIKRTVEDEIKFSMKNRGTY--------DEKRLGEVLKMFSLDAYRKEDPLVL 417
Query: 141 SGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITVMHDLT 200
S G+ ++VA+A +A VIL+DEPT+ D + + + + +L +G T++ V HD
Sbjct: 418 SMGQRRRVAMASVLAGGAKVILMDEPTSGQDWYHRQILGKELLELRDKGYTILVVTHDSR 477
Query: 201 LALRFGEKFLFLKDGEV 217
RF + L + +G++
Sbjct: 478 FVDRFADYLLVMNEGKI 494
>gb|AAK42084.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 530
Score = 123 bits (307), Expect = 1e-27
Identities = 73/246 (29%), Positives = 134/246 (53%), Gaps = 13/246 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGV--NFDVGEGEFLVILGPNGAGKTTLLRCIAGIL----- 57
+K +E+ +L+ +Y GK V D+ EGE ++I G +G+GK+TL+ I G++
Sbjct: 1 MKFVEIRDLQVTYMGKTKPSIVIDKLDIEEGESVLITGRSGSGKSTLVSVINGVIPHLIN 60
Query: 58 -KCKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRR 114
+ KG+V+VFG I+ E+++ + + Q + V D V G YM R
Sbjct: 61 AEVKGEVRVFGLDIKTTPTSEISRYVGTLLQDPDTQAFNYTVIDEVAFGVENYM--VSRE 118
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
E + V ++K+ + DR + TLSGGELQ+ +A +A ++LDEPT+N+DP+
Sbjct: 119 EMINRVEESMKICGISHLRDREINTLSGGELQRTVLASVLAMRPKALILDEPTSNIDPQG 178
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRV-LSE 233
+++ ++K EG +++ V H + L F ++ + ++ G++ + +DE+ DR L
Sbjct: 179 TREILELVKTFRSEGISLVLVEHKIERVLPFIDRIIVVESGKIAVDIKKDEIIDRADLLH 238
Query: 234 TYGISV 239
+ G+ +
Sbjct: 239 SLGLEI 244
Score = 79.6 bits (193), Expect = 3e-14
Identities = 57/197 (28%), Positives = 95/197 (47%), Gaps = 19/197 (9%)
Query: 32 EGEFLVILGPNGAGKTTLLRCIAGILKCKG------DVKVFGKSIRDMNRLELAKLLAYV 85
+G ++G NG+GKTTLL+ I G++ K V V GK + +E K LAY+
Sbjct: 306 QGTITALMGKNGSGKTTLLKAIVGLIDKKRLIVEEEKVIVNGKDLSKAKLVERGKYLAYL 365
Query: 86 PQRVEPGFLR-----VFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMKTL 140
PQ + F++ F + R Y D + L++ ++ + L
Sbjct: 366 PQFFDVMFIKRTVEDEVKFSMKNRGVY--------DEMRLGEILRIFSLDAYRTEDPLVL 417
Query: 141 SGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITVMHDLT 200
S G+ ++VA+A IA VIL+DEPT+ D + + + + +L +G T++ V HD
Sbjct: 418 SMGQRRRVAMASVIAGGAKVILMDEPTSGQDWYHRQILGKELLELRNKGYTILVVTHDAR 477
Query: 201 LALRFGEKFLFLKDGEV 217
RF + L + DG++
Sbjct: 478 FVDRFTDYLLVMSDGKI 494
>pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AAC06828.1|
(AE000698) ABC transporter [Aquifex aeolicus]
Length = 232
Score = 123 bits (307), Expect = 1e-27
Identities = 82/216 (37%), Positives = 123/216 (55%), Gaps = 23/216 (10%)
Query: 5 VKVIEVSNLEFSYNGK-NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GD 62
++VIEV NL FSY+GK NVL V+F V +G+FL I+GPNGAGK+TLL+ I G LK K G+
Sbjct: 1 MRVIEVKNLTFSYDGKHNVLEDVSFYVEKGDFLGIVGPNGAGKSTLLKLILGFLKPKSGE 60
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVE-----PGFLRVFDFVLLGRRPYMGLSPRREDL 117
+ +FGK I + K + YVPQR+ PG ++ LS ED
Sbjct: 61 IYLFGKKIEEFKDW---KRVGYVPQRLSVEHAFPGTVKEL------------LSSVCEDK 105
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
+ + ++ L+++ ++ LSGG+ Q+V +A A++ +ILLDEPT LD +
Sbjct: 106 KEIDYLVEFLKLKNIVNKQFTKLSGGQQQRVLLAMALSYNPELILLDEPTVGLDVHAINH 165
Query: 178 VMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFL 212
M I+ DL + K+++ + HD+ L+ K L L
Sbjct: 166 FMSILLDLNMNHKKSIVMISHDIGTLLKHASKILCL 201
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 123 bits (306), Expect = 2e-27
Identities = 81/217 (37%), Positives = 127/217 (58%), Gaps = 8/217 (3%)
Query: 7 VIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
++E +L F Y +G VL+G+NF V +GE + +LGPNGAGK+TL GIL+ KG+V
Sbjct: 3 IVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTKGEVL 62
Query: 65 VFGKSIR--DMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLEAV 120
+ GK I+ + +E+ K + V Q + V + V G +GL P+ E + V
Sbjct: 63 IKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAPTVKEDVAFGPLN-LGL-PKEEVEKRV 120
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+ ALK + +E FE++ LSGG+ ++VAIA +A + VI+LDEPT LDP +M+
Sbjct: 121 KEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKIMK 180
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++ DL +G T+I HD+ L + +K + DG++
Sbjct: 181 LLYDLNKKGMTIIISTHDVDLVPVYADKVYVMYDGKI 217
>pir||B83225 ATP-binding component of ABC phosphonate transporter PA3384
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9949519|gb|AAG06772.1|AE004759_19 (AE004759)
ATP-binding component of ABC phosphonate transporter
[Pseudomonas aeruginosa]
Length = 278
Score = 123 bits (305), Expect = 3e-27
Identities = 88/250 (35%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK----GD 62
VI V +L ++ K L + ++ GE + ++G +G+GK+TLLR +AG+ +C G
Sbjct: 4 VIRVDSLNKTFARKQALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGS 63
Query: 63 VKVFGKSIRDMNRL--ELAKLLA---YVPQRVE-PGFLRVFDFVLLGRRPYMGLSPRRE- 115
+ V G+ ++ RL E+ +L A Y+ Q+ L V D VLLG ++G PR
Sbjct: 64 IDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLG---FLGRMPRWRG 120
Query: 116 -----DLEAVRRALKLLR---VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPT 167
E R+AL+ L + +F + TLSGG+ Q+VAIARA+ Q+ VIL DEP
Sbjct: 121 SLGLFSAEQKRQALEALARVGLADFAGQRASTLSGGQQQRVAIARALTQKAEVILADEPI 180
Query: 168 NNLDPKSQIDVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+LDP+S VM I+ D+ +GKTV+ +H + ALR+ + + LK G + + + L
Sbjct: 181 ASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGSSEYL 240
Query: 227 EDRVLSETYG 236
+ L+E YG
Sbjct: 241 SEGFLNELYG 250
>gb|AAG20605.1| (AE005130) ferrichrome ABC transporter ATP-binding protein; YfmF
[Halobacterium sp. NRC-1]
Length = 273
Score = 123 bits (305), Expect = 3e-27
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 6/238 (2%)
Query: 11 SNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCI-AGILKCKGDVKVFGKS 69
++LE Y V+ + V GE ++GPNG+GK+TLL+ A + G V + G +
Sbjct: 22 TDLELGYGDTTVVDCADIVVPAGEVTALVGPNGSGKSTLLKGFSAELAPDAGTVLLDGTA 81
Query: 70 IRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPRREDLE--AVRRALKL 126
+ D + +LA L + Q + PG L V D V GR P+ G D + A+ RA+ L
Sbjct: 82 VHDRSPKQLASELGLLAQENDAPGGLTVGDLVTHGRYPHRGFLDALNDADHAAIDRAIDL 141
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
VE D + LSGG+ Q +A A+AQ+T V+LLDEPT LD Q+ VM +++ L
Sbjct: 142 AGVEHLRDTALSELSGGQKQLAFVAMALAQDTDVLLLDEPTTYLDLHHQLRVMEVVRTLN 201
Query: 187 GE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKVA 242
+ TV V+HDL A RF + + L DG V D + + +L++ +G+ V+
Sbjct: 202 EDRDVTVCVVLHDLQQAARFADYLVALDDGTVYDWGPPEDVVTEDLLADVFGVDAAVS 259
>sp|Q47087|CBRD_ERWCH ACHROMOBACTIN TRANSPORT ATP-BINDING PROTEIN CBRD
>gi|1073286|pir||S54823 CbrD protein - Erwinia
chrysanthemi >gi|809544|emb|CAA60669.1| (X87208) CbrD
protein [Erwinia chrysanthemi]
Length = 273
Score = 122 bits (304), Expect = 3e-27
Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 13 LEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIR 71
L Y + ++ ++ + EG+ V++G NG+GK+TLL+ A +LK KG V + G+ I
Sbjct: 9 LTLGYASQTIIDNLDIQLPEGKVSVLIGSNGSGKSTLLKSFARLLKPLKGAVILNGEDIH 68
Query: 72 DMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLLR 128
+ +A+ LA +PQ + P + V V LGR PY + +D V +AL+
Sbjct: 69 RQSTAAVARELAILPQMPDAPEGITVKQLVSLGRYPYQNWLQQWSEQDEAMVNQALRQTG 128
Query: 129 VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE 188
+ +R + LSGG+ Q+V IA + Q+T V+LLDEPT LD QI+V+ ++++L +
Sbjct: 129 TDMLAERPVDALSGGQRQRVWIAMTLGQDTEVVLLDEPTTFLDLAHQIEVLDLLRELNRQ 188
Query: 189 -GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSET 234
GKT+I V+HDL LA R+G+ + + + E+ D L +T
Sbjct: 189 HGKTIIMVLHDLNLACRYGDHMVAVHNRTAFAQGAPAEILDEALVKT 235
>emb|CAB76301.1| (AL158057) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 292
Score = 122 bits (303), Expect = 4e-27
Identities = 83/241 (34%), Positives = 127/241 (52%), Gaps = 7/241 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
+ + + +Y+G +V+ + GE V++GPNG+GK+TLLR +A + + +
Sbjct: 18 LSATGVTVAYDGVDVVHDAGVRLRPGEVTVLVGPNGSGKSTLLRTVARLQRARSATLSLD 77
Query: 68 KSIRDM--NRLELAKLLAYVPQ-RVEPGFLRVFDFVLLGRRPYMGL--SPRREDLEAVRR 122
+ + E ++ +A + Q R PG L V D V GR PY G P + AV R
Sbjct: 78 GATDGLALTSREFSRYVALLTQGRPTPGGLTVRDVVEFGRYPYRGRWGRPDPDGPAAVER 137
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL L V+ DR LSGG+LQ+V +A +AQET V+LLDEPT LD + Q++++ +I
Sbjct: 138 ALALTGVDGLADRGADHLSGGQLQRVWLASCLAQETGVLLLDEPTTYLDLRYQVELLDLI 197
Query: 183 KDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVK 240
+DL + G V V+HDL A ++ L+ G + D L L+ YGI +
Sbjct: 198 RDLADDHGIAVGVVLHDLDQAAAVADRITLLEAGRIVADGPPEDVLTPERLTAVYGIRID 257
Query: 241 V 241
V
Sbjct: 258 V 258
>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
>gi|1075335|pir||G64181 ABC-type transport protein
HI1078 - Haemophilus influenzae
>gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 257
Score = 122 bits (302), Expect = 6e-27
Identities = 79/234 (33%), Positives = 137/234 (57%), Gaps = 17/234 (7%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCI-------AGIL 57
+ +++VSN++ ++NG +VL+G++F++ +GE + ILGP+G+GKTT LRC+ GIL
Sbjct: 1 MSMLKVSNIQKNFNGNHVLKGIDFEINKGEVVAILGPSGSGKTTFLRCLNLLERPEQGIL 60
Query: 58 K-CKGDVKV-FGKSIRDMNRLELAKLLAYVPQRVEPGFLR-VFDFVLLGRRPYMGLSPRR 114
+ G +K+ F + I + L+L + + V Q+ R + V+ G M + ++
Sbjct: 61 EFTDGSLKIDFSQKISKADELKLRRRSSMVFQQYNLFPHRSALENVMEG----MVVVQKQ 116
Query: 115 EDLEAVRRALKLLR---VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLD 171
+ +A +AL LL ++ D LSGG+ Q+V IARA+A + +ILLDEPT+ LD
Sbjct: 117 DKAQAREKALSLLEKVGLKNKADLFPSQLSGGQQQRVGIARALAVKPDIILLDEPTSALD 176
Query: 172 PKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE 225
P+ +V++ +K L EG T+I V H++ A ++ + + DG + T D+
Sbjct: 177 PELVGEVLQTLKMLAQEGWTMIIVTHEMQFAKDVADRVILMADGHIVEQNTADK 230
>emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococcus xylosus]
Length = 257
Score = 122 bits (302), Expect = 6e-27
Identities = 75/200 (37%), Positives = 115/200 (57%), Gaps = 10/200 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
V E+ N+++ ++ K VL +N + GEF+ I+GPNGAGK+TLL+ I G+L KG + V
Sbjct: 5 VFELKNIDYYFDNKQVLENINIKINRGEFVAIVGPNGAGKSTLLKIILGLLPIQKGRIYV 64
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEP---GF-LRVFDFVLLG--RRPYMGLSPRREDLEA 119
GK D N + ++YV Q+ + GF V + V+ G +R + R D E+
Sbjct: 65 DGK---DYNGNQSLLKISYVSQKAQAFKAGFPASVKEVVISGLTKRKKLFQWFNRNDEES 121
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V+ L L +E D+ + LSGG+ Q+V IARA+ E V++LDEPT+ +D K +
Sbjct: 122 VKTVLSRLNIEHLIDKNIAELSGGQQQRVLIARALISEPSVLILDEPTSGIDAKHVSEFY 181
Query: 180 RIIKDLIGEGKTVITVMHDL 199
++ L EG T+I V HD+
Sbjct: 182 ETLETLKQEGVTIILVTHDI 201
>pir||S75197 ABC-type transport protein slr2044 - Synechocystis sp. (strain PCC
6803) >gi|1652187|dbj|BAA17111.1| (D90903) ABC
transporter [Synechocystis sp.]
Length = 289
Score = 121 bits (301), Expect = 7e-27
Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 12/205 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
VI V NL Y VL +N V E +FL ++GPNG GKTTLL+ + G+++ + G V++
Sbjct: 22 VIAVENLFAGYGATPVLENINLRVEERDFLGLIGPNGGGKTTLLKVLLGLIQPQQGTVQI 81
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVE--PGF-LRVFDFVLLGRRPYMGLSPR--REDLEAV 120
G+S+ R + YVPQ +E F +RV D V +GR L R ++D V
Sbjct: 82 LGRSVEQGRRY-----VGYVPQWLEFDRAFPVRVLDVVRMGRLGRGKLFRRYHQQDEAIV 136
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
RR L+ + + + DR + TLSGG+ Q+V IARA+A + ++LLDEPT N+D K Q +
Sbjct: 137 RRCLEQVGMGDLGDRPLGTLSGGQRQRVYIARALASQPQILLLDEPTANVDSKVQRSIYE 196
Query: 181 IIKDLIGEGKTVITVMHDLTLALRF 205
++ +L + T++ + HDL R+
Sbjct: 197 LLGEL-NQTMTIVMISHDLGAISRY 220
>pir||A70338 ABC transporter - Aquifex aeolicus >gi|2983088|gb|AAC06694.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 219
Score = 121 bits (301), Expect = 7e-27
Identities = 85/224 (37%), Positives = 129/224 (56%), Gaps = 20/224 (8%)
Query: 5 VKVIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
+KV+E+ N++ Y +G L+GV+ V EGEFL ++GP+G+GK+TLL I G+ K +G
Sbjct: 1 MKVVELKNVKKIYPDGTIALKGVSLSVEEGEFLGVMGPSGSGKSTLLHLIGGLDKPSEGI 60
Query: 63 VKVFGKSIRDMNRLELAKL----LAYVPQRVEPGFLRVFDFVLLGRRPYMG-----LSPR 113
VKVFGK I ++ ELA++ +AYV Q + + DF +L +G +P+
Sbjct: 61 VKVFGKEINHLDEDELAEMRKRKIAYVFQF----YYLLEDFSVLENLTLIGELAGIKNPK 116
Query: 114 REDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
++ LE L LR+ + LSGGE Q+VAI RA+ E +IL DEPT NLD K
Sbjct: 117 KKALEL----LDFLRLSHRINHKPYQLSGGEQQRVAIGRALMVEPKLILADEPTGNLDSK 172
Query: 174 SQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ + K+L +G T + H+ +L FG + + L+DGE+
Sbjct: 173 EGFRIFELFKELNEKGITFVVATHNDSLKPFFG-RIINLRDGEI 215
>gb|AAF13757.1|AF117351_14 (AF117351) hypothetical ABC transpoter ATP-binding protein
[Zymomonas mobilis]
Length = 261
Score = 121 bits (301), Expect = 7e-27
Identities = 75/235 (31%), Positives = 127/235 (53%), Gaps = 10/235 (4%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KG 61
+ + +++ NL + +L ++ +GE +LG NGAGK+TLLR + G++ +G
Sbjct: 10 ISMTLLQARNLRYRRQKTVILDDISLSFHQGELTALLGINGAGKSTLLRLLLGLMPPDEG 69
Query: 62 DVKVFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYM--GLSPRREDLE 118
++ + K ++ ++R +A+ +AYVPQ + F V + V LGR PY+ G + D +
Sbjct: 70 NIFLQNKPLKAISRKTIARHIAYVPQEHKAIFPYTVEEVVSLGRLPYIAFGQNLSLSDKQ 129
Query: 119 AVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
AVR+AL L + R LSGGE Q V +ARA+AQ P+++LDEP LD Q+ +
Sbjct: 130 AVRQALDYLNIASLSARPYTELSGGERQSVLLARALAQGAPILVLDEPETGLDFGQQLRL 189
Query: 179 MRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLK------DGEVTGIMTRDELE 227
+++ L EG ++ HD A + + + L+ DG ++TR +E
Sbjct: 190 AVLLQKLADEGYCIVATTHDPLRARQIFSRAILLQQGRIIADGAPKSVLTRSAIE 244
>pir||S61910 hypothetical protein 5 - Streptococcus parasanguis
>gi|567769|gb|AAA53075.1| (M26130) ORF5; predicted
protein shows similarity to ATP-binding transport
proteins AmiE and AmiF of Streptococcus pneumoniae;
disruptuion of ORF5 leads to aminopterin resistance
[Streptococcus parasanguinis]
Length = 240
Score = 121 bits (300), Expect = 1e-26
Identities = 78/235 (33%), Positives = 126/235 (53%), Gaps = 10/235 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
+I++ +L +Y L ++ + L ILGPNGAGK+TL++ + G+L G V++
Sbjct: 1 MIQIEHLSVAYQQTLALEDLSLTIQGPTILGILGPNGAGKSTLIKAMLGLLPHSGRVQLD 60
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPRR--EDLEAVR 121
K + ++ + +AYV Q+ F + V + V LG P++ + R+ EDL+ V
Sbjct: 61 QKDLS-----QVLQRVAYVEQKSAIDFHFPITVRECVSLGLYPHLSIFKRKSKEDLKKVE 115
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
ALKL+ + + DR + LSGG+ Q+V IAR + QE VI LDEP +D S+ +M+
Sbjct: 116 NALKLVNLLDLADRQIGQLSGGQFQRVLIARCLVQEADVIFLDEPFAGIDSVSEDIIMQT 175
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
++ L EGKT++ V HDL+ + +K L L + T + L YG
Sbjct: 176 LQTLKQEGKTILIVHHDLSKVPAYFDKVLLLHRKLIAFGKTEETFTKENLHAAYG 230
>pir||S60887 ferric exochelin uptake protein fxuB - Mycobacterium smegmatis
>gi|595403|gb|AAC43260.1| (U10425) FxuB [Mycobacterium
smegmatis] >gi|1092650|prf||2024335B fxuB gene
[Mycobacterium smegmatis]
Length = 235
Score = 121 bits (300), Expect = 1e-26
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSI 70
++ Y+ + ++ G+ V I+GPN GK+TLLR A +L G V + G I
Sbjct: 17 DVSIGYDDRTIIDGLTVQVPADRVTAIVGPNACGKSTLLRGFARLLTPSAGRVILDGHDI 76
Query: 71 RDMNRLELAKLLAYVPQR-VEPGFLRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLL 127
M+ ++A+ L +PQ + P + V D V GR P+ + + R+D AV A++
Sbjct: 77 ATMHTKDVARRLGLLPQTSIAPEGITVADLVSRGRFPHQKVFRQWSRDDAAAVADAMRHT 136
Query: 128 RVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIG 187
V E R++ LSGG+ Q+V +A +AQETP+ILLDEPT LD Q++++ + L
Sbjct: 137 GVTELSARLVDELSGGQRQRVWVAMVLAQETPLILLDEPTTYLDIAHQVELLDLFAMLNR 196
Query: 188 E-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
E G+TV+ V+HDL A R+ ++ + +K G +
Sbjct: 197 EHGRTVVAVLHDLNQACRYADELIVMKAGRI 227
>pir||B83282 probable ATP-binding component of ABC transporter PA2912 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949005|gb|AAG06300.1|AE004717_6 (AE004717) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 257
Score = 120 bits (299), Expect = 1e-26
Identities = 79/225 (35%), Positives = 125/225 (55%), Gaps = 8/225 (3%)
Query: 22 VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKVFGKSIRDMNRLELAK 80
+LRGV+ +V G F+ ++GPNG+GKT+LLRC + +G V + G + A+
Sbjct: 19 LLRGVHLEVPAGSFVGLIGPNGSGKTSLLRCAFRYARPQRGRVVLDGDDLWRQPPRWAAR 78
Query: 81 LLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRR--EDLEAVRRALKLLRVEEFEDRVM 137
+A V Q F L V D V +GR P+ GL +D + VR+AL + +E
Sbjct: 79 RIAVVLQEFPEDFGLAVEDVVAMGRTPHKGLFDGHGADDRQRVRQALLQVGLEGRAASPF 138
Query: 138 KTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITVMH 197
+LSGGE Q+ +ARA+ QE +++LDEPTN+LDP+ Q++++R+++ L G + + H
Sbjct: 139 ASLSGGEKQRALLARALVQEPRLLILDEPTNHLDPRYQLELLRLLRSL---GLSTLASFH 195
Query: 198 DLTLALRFGEKFLFLKDGEVTGIMTRDELEDR-VLSETYGISVKV 241
DL LA F ++ L G + T E+ D +L +G+ V
Sbjct: 196 DLNLAAAFCDRLYVLDGGRIVAQGTPTEVLDADLLWRVFGVRALV 240
>sp|Q58206|Y796_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0796
>gi|2127938|pir||D64399 glutamine transport ATP-binding
protein Q homolog - Methanococcus jannaschii
>gi|1591493|gb|AAB98791.1| (U67524) ABC transporter,
ATP-binding protein [Methanococcus jannaschii]
Length = 235
Score = 120 bits (299), Expect = 1e-26
Identities = 83/224 (37%), Positives = 130/224 (57%), Gaps = 14/224 (6%)
Query: 7 VIEVSNLEFSYN-GKNV---LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKG 61
+I++ N+ +Y G+ + L+ VN ++ EGEF+ I+GP+G+GK+T+L I + K +G
Sbjct: 1 MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEG 60
Query: 62 DVKVFGKSIRDMNRLELAKL----LAYVPQRVE--PGFLRVFDFVLLGRRPYMGLSPRRE 115
+V + D++ EL K+ + +V Q+ P + + L Y G E
Sbjct: 61 EVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEE 120
Query: 116 DLEAVRRALKLLRVEE-FEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
+ LK+ +EE F + LSGG+ Q+VAIARA+A P+IL DEPT LD K+
Sbjct: 121 RRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKT 180
Query: 175 QIDVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+M+++K L E GKTV+ V HD+ +A RFGE+ ++LKDGEV
Sbjct: 181 GEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEV 223
>gb|AAG20232.1| (AE005098) phosphonates transport ATP-binding; PhnC [Halobacterium
sp. NRC-1]
Length = 280
Score = 120 bits (297), Expect = 2e-26
Identities = 84/240 (35%), Positives = 130/240 (54%), Gaps = 18/240 (7%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
I V+NL SY + L V+F++ +GEF+VILG +GAGK+TLLRC+ G+ + G VK+
Sbjct: 4 ITVTNLHKSYGDVDALEDVSFEILDGEFVVILGESGAGKSTLLRCLNGLTEPTTGSVKID 63
Query: 67 GKSI---RD------MNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDL 117
G+ + RD + ++ AY G L V R + R E L
Sbjct: 64 GEPVNGPRDDVGMIFQQHNIIEEMTAYT--NALSGSLNRTSLV----RSLFQWNDREEKL 117
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
+A+R + +++ E R + +SGG+ Q+V I+RA+ Q+ ++L DEP +LDP S
Sbjct: 118 DALRALDTVGLLDDAEQRAGR-MSGGQQQRVGISRALVQDPNLLLADEPVASLDPASAES 176
Query: 178 VMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
VM IKD + T + +H + LA FG++F+ +KDG V RD+L V+ + YG
Sbjct: 177 VMGYIKDAADQHDLTTLASLHQVNLAREFGQRFIGMKDGRVIFDGYRDDLTFDVIDDIYG 236
>pir||H81018 iron(III) ABC transporter, ATP-binding protein NMB1993 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7227255|gb|AAF42320.1| (AE002548) iron(III) ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 252
Score = 119 bits (296), Expect = 3e-26
Identities = 70/214 (32%), Positives = 114/214 (52%), Gaps = 3/214 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
+I + N+ + + +L V+ D+ EG ++GPNGAGK+TL +A + + G +
Sbjct: 1 MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLFSFMARLRPLESGSIAY 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
GK++ D ELAK L+ + Q + V D ++ GR PY P E V A+
Sbjct: 61 RGKNLADTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYPYHQGRPTAECRRIVNGAI 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+ +++ DR + LSGG+ Q+ IA Q T +LLDEP NNLD +M+I++
Sbjct: 121 EEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLDEPLNNLDMYHARSLMQILRR 180
Query: 185 LIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEV 217
L E K T + V+HD+ A + + + +K+G+V
Sbjct: 181 LTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQV 214
>gb|AAD56937.1|AF180520_2 (AF180520) ATP-binding protein MtsB [Streptococcus pyogenes]
Length = 241
Score = 118 bits (294), Expect = 5e-26
Identities = 85/254 (33%), Positives = 138/254 (53%), Gaps = 24/254 (9%)
Query: 7 VIEVSNLEFSYNGK-NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKV 65
+I +NL +Y+G N L +N + + I+GPNGAGK+T ++ I ++ +G V V
Sbjct: 1 MITTNNLCVTYDGNSNALEAINVTIEGPSIVGIIGPNGAGKSTFMKAILNLIDYQGHVTV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAV 120
GK R +L +AYV QR ++ F + V + V LG +GL R ++ E V
Sbjct: 61 DGKDGR-----KLGHTVAYVEQRSMIDYNFPITVKECVALGTYSKLGLFRRVGKKQFEQV 115
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+ LK + +E+F R +K+LSGG+ Q++ +AR + QE+ I LDEP +D S+ ++
Sbjct: 116 DKVLKQVGLEDFGHRPIKSLSGGQFQRMLVARCLIQESDYIFLDEPFVGIDSVSEKIIVD 175
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKD-----GEVTGIMTRDELEDRVLSETY 235
++K+L GKT++ V HDL+ + +K + L G V + T D LS+ Y
Sbjct: 176 LLKELKMAGKTILIVHHDLSKVEHYFDKLMILNKHLVAYGNVCEVFTVD-----TLSKAY 230
Query: 236 GISVKVAKLGREIV 249
G + LG+E+V
Sbjct: 231 GNHL---ILGKEMV 241
>gi|11467416 putative protein of 244 amino acids [Cyanophora paradoxa]
>gi|1351806|sp|P48334|YCXD_CYAPA PROBABLE ABC
TRANSPORTER ATP-BINDING PROTEIN IN YCF23-APCF INTERGENIC
REGION (ORF244) >gi|7445867|pir||T06961 ABC transport
protein homolog - Cyanophora paradoxa cyanelle
>gi|1016217|gb|AAA81304.1| (U30821) putative protein of
244 amino acids [Cyanophora paradoxa]
Length = 244
Score = 117 bits (291), Expect = 1e-25
Identities = 73/237 (30%), Positives = 133/237 (55%), Gaps = 11/237 (4%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
K +E++NL SY VL+ + + G+ + I+GPNGAGK+TLL+ I +K G++
Sbjct: 7 KQLEINNLTVSYPHGTVLQNIFLTIESGKLIGIIGPNGAGKSTLLKTIIEQIKPISGEIF 66
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGL--SPRREDLEA 119
G +++ + YVPQR + + + V+D V++ R +G S ++ E
Sbjct: 67 YQGAPLKNQRAR-----IGYVPQRAQVDWDFPINVWDVVMMARLKKIGWFSSYSKKSYEC 121
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V+ AL+ + + +++DR ++ LSGG+ Q+V +AR +AQE ++LLDEP +D ++Q +
Sbjct: 122 VKAALEKVDMLKYKDRNIRELSGGQQQRVFLARLLAQEADLLLLDEPFTGVDFQTQKIIF 181
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
++K+ I K VI + HDL ++ ++ + L ++ +T L + LS +G
Sbjct: 182 SLLKEQIASNKIVIVIHHDLGESIINFDELILLNKKIISHDLTTKILNSKKLSTLFG 238
>pir||C72576 probable glutamine transport ATP-binding protein APE1891 -
Aeropyrum pernix (strain K1) >gi|5105583|dbj|BAA80896.1|
(AP000062) 238aa long hypothetical glutamine transport
ATP-binding protein [Aeropyrum pernix]
Length = 238
Score = 117 bits (290), Expect = 1e-25
Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 10/209 (4%)
Query: 16 SYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFGKSIRDMNR 75
SY+G+ VL+GV+ + GE LVI+GP+G+GK+TLL+ I +++ VF D+ R
Sbjct: 3 SYSGEKVLKGVDVSLSYGEKLVIMGPSGSGKSTLLKAIPRLVEPDSGSIVFRGV--DVTR 60
Query: 76 LELAKL------LAYVPQRVEP-GFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLR 128
L ++L + Y+PQ + V + +GLS RR+ E + L +L
Sbjct: 61 LSGSQLRMVRRKIGYLPQSYSLFPHMTVLRNITYPLEKALGLS-RRDAEERAVKYLSMLG 119
Query: 129 VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE 188
+E+ R LSGG+ Q+ A+ARA+A E ++LLDEPT+ LDP+S+ DV+ + +
Sbjct: 120 IEDLAHRHPARLSGGQQQRAALARALAMEPDILLLDEPTSALDPESRADVLEALFRVATL 179
Query: 189 GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
GK +I V H+ A++ ++ F++DG V
Sbjct: 180 GKAMIVVTHEADFAVKVADRMAFMEDGIV 208
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 117 bits (290), Expect = 1e-25
Identities = 81/218 (37%), Positives = 128/218 (58%), Gaps = 13/218 (5%)
Query: 8 IEVSNLEFSYNGKN----VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
+++ N+ Y K VLRG+N ++ +GEF+VILGP+G GKTT+L+ IAG+L+ KG
Sbjct: 5 VKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQDKGH 64
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQR--VEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
V + G+ + D+ + + +A VPQ + P F+ V+D + + M LS + E + V
Sbjct: 65 VYLRGEVVDDLPPKD--RRVAMVPQNYAIYP-FMSVYDNIAFPLK-VMHLS-KDEIKKRV 119
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
++LR++ +R LSGG++Q+VAIARA+ + +IL+DEP +NLD + ++
Sbjct: 120 LEVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRVVARE 179
Query: 181 IIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEV 217
+K L + K T+I V HD AL K L DG V
Sbjct: 180 ELKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVV 217
>pir||S54440 hemin-specific ATP-binding protein [validated] - Yersinia
enterocolitica >gi|1619625|emb|CAA54864.1| (X77867)
ATPase component [Yersinia enterocolitica]
Length = 266
Score = 116 bits (289), Expect = 2e-25
Identities = 79/260 (30%), Positives = 133/260 (50%), Gaps = 14/260 (5%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKG 61
V ++E + L + G+ ++ V+ + GE + I+GPNGAGK+TLLR + G L +G
Sbjct: 7 VDTALLEANQLSYHVQGQKLINNVSLQIASGEMVAIIGPNGAGKSTLLRLLTGYLAPSEG 66
Query: 62 DVKVFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAV 120
++ GK++ LA+ A + Q + F V + + +GR PY G + R+ L+ V
Sbjct: 67 HCQLLGKNLNSWQPQALARTRAVMRQYSDLAFPFSVSEVIQMGRAPY-GAAQNRQALQEV 125
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQ------ETPVILLDEPTNNLDPKS 174
L + + R + LSGGE Q+V +AR +AQ + + LDEPT+ LD
Sbjct: 126 MAQTDCLALAQ---RDYRALSGGEQQRVQLARVLAQLWQPEPTSRWLFLDEPTSALDLYH 182
Query: 175 QIDVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLS 232
Q +R+++ L + E V V+HDL LA + ++ L L GE+ T +E L L+
Sbjct: 183 QQHTLRLLRQLTLEEPLAVCCVLHDLNLAALYADRILLLAQGELVACGTPEEVLNAETLT 242
Query: 233 ETYGISVKVAKLGREIVPLV 252
Y + +++ +P +
Sbjct: 243 RWYQADLGISRHPESALPQI 262
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 116 bits (289), Expect = 2e-25
Identities = 81/229 (35%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
I V N+ S+ L +N DV EGEFL ILGP+G GK+TLLR IAG+ GD+ +
Sbjct: 4 ISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDIVIA 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPG-FLRVFDFVLLGRRPYMGLSPRREDLEAVRRALK 125
GK + N + + +V Q L VF V +G + +P+ E + V +AL+
Sbjct: 64 GKQVT--NDPVWKRKIGFVFQNFALWPHLTVFKNVAMGLE--LRKTPKDELQQRVTKALR 119
Query: 126 LLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL 185
++++E DR+ LSGG+ Q+VA+ARAI + V+LLDEP + LD + D+ +K L
Sbjct: 120 MVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQVELKAL 179
Query: 186 IGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE 233
G T + V HD AL ++ + + G + + T D + ++ +SE
Sbjct: 180 QRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNIYNKPVSE 228
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 116 bits (288), Expect = 2e-25
Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 5/221 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
+++ ++ + L G++ V EGEFLV+LGP+G GKTTLLRCIAG+ + G F
Sbjct: 4 VKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKIFFN 63
Query: 68 -KSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
+ + ++ + + + V P ++V+D + + + P+ E + V+ A L
Sbjct: 64 DRDVTNLPPKDRNISMVFQSYAVWP-HMKVYDNIAYPLK--LKKVPKEEIEKRVKWAADL 120
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
L + E DR LSGG+ Q+VA+ARAI E V+L+DEP +NLD ++ + +K L
Sbjct: 121 LHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKLQ 180
Query: 187 GE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
G T I V HD T A+ G++ + G++ + T E+
Sbjct: 181 ERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEI 221
>dbj|BAB07011.1| (AP001518) ferrichrome ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 261
Score = 116 bits (288), Expect = 2e-25
Identities = 76/219 (34%), Positives = 121/219 (54%), Gaps = 7/219 (3%)
Query: 30 VGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIRDMNRLELAKLLAYVPQR 88
+ +G+ I+GPNG+GK+TLL+ I+ +LK GDV++ S +M + A+ LA +PQ
Sbjct: 26 IPKGKITAIVGPNGSGKSTLLKIISRLLKQDVGDVRIEAMSTANMQPKDFAQKLAMMPQS 85
Query: 89 VEP-GFLRVFDFVLLGRRPYMG---LSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGE 144
+ L V + + GR PY ED + A+ + ++ +R+ TLSGGE
Sbjct: 86 KQALPNLTVEELIAYGRSPYQKWFQAKKSEEDQSIIEWAMTVTGTKKHANRMFHTLSGGE 145
Query: 145 LQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITVMHDLTLAL 203
QKV IA A+AQ+T ++LLDEPT LD Q+DVM +++++ + TV+ V+H+L A
Sbjct: 146 QQKVRIALALAQKTDILLLDEPTTYLDIAHQLDVMEMLEEINEKYSITVVMVLHELQQAA 205
Query: 204 RFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKV 241
+ + + +K G V + L L + Y I KV
Sbjct: 206 AYCDHLIAMKKGAVVAEGEPKQLLTSSFLKDVYQIEAKV 244
>gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [Streptococcus
pyogenes]
Length = 296
Score = 116 bits (287), Expect = 3e-25
Identities = 80/228 (35%), Positives = 137/228 (60%), Gaps = 12/228 (5%)
Query: 7 VIEVSNLEFSYNG---KNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GD 62
+IE+ + F+Y+ K L GV+F V +GE+L I+G NG+GK+T +R I G+L+ + G
Sbjct: 21 IIELKKVTFNYHKDQEKPTLDGVSFHVKQGEWLSIIGHNGSGKSTTIRLIDGLLEPESGS 80
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRREDL-EA 119
+ V G + N E+ + V Q + F+ V D V G G++ ED+ E
Sbjct: 81 IIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLEN-KGIA--HEDIKER 137
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V AL+L+ ++ F+++ LSGG+ Q+VAIA A+A + +I+LDE T+ LDPK +++++
Sbjct: 138 VNHALELVGMQNFKEKEPARLSGGQKQRVAIAGAVAMKPKIIILDEATSMLDPKGRLELI 197
Query: 180 RIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ IK++ + + TVI++ HDL + ++ L +KDG+V T ++L
Sbjct: 198 KTIKNIRDDYQLTVISITHDLD-EVALSDRVLVMKDGQVESTSTPEQL 244
>sp|P07821|FHUC_ECOLI FERRICHROME TRANSPORT ATP-BINDING PROTEIN FHUC
>gi|7428824|pir||QRECFH ferrichrome transport
ATP-binding protein fhuC - Escherichia coli
>gi|1552729|gb|AAB08581.1| (U70214) ferrichrome-iron
transport protein FhuC [Escherichia coli]
>gi|1786345|gb|AAC73262.1| (AE000124) ATP-binding
component of hydroxymate-dependent iron transport
[Escherichia coli K12]
Length = 265
Score = 116 bits (287), Expect = 3e-25
Identities = 74/236 (31%), Positives = 130/236 (54%), Gaps = 6/236 (2%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSI 70
N+ F G+ +L ++ G+ ++G NG+GK+TLL+ + +G++ + + +
Sbjct: 16 NISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPL 75
Query: 71 RDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLL 127
+ A+ +AY+PQ++ P + V + V +GR P+ G R D E V A+ L+
Sbjct: 76 ESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV 135
Query: 128 RVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIG 187
++ R++ +LSGGE Q+ IA +AQ++ +LLDEPT+ LD Q+DV+ ++ L
Sbjct: 136 GLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQ 195
Query: 188 E-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKV 241
E G TVI V+HD+ +A R+ + + L+ GE+ T E + L YGI + +
Sbjct: 196 ERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMIYGIPMGI 251
>pir||B82352 iron(III) ABC transporter, ATP-binding protein VC0201 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654607|gb|AAF93377.1| (AE004110) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 285
Score = 116 bits (287), Expect = 3e-25
Identities = 71/216 (32%), Positives = 123/216 (56%), Gaps = 5/216 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+ ++++++ G+ +L + + E V+LG NG+GK+TL+ ++G G V +
Sbjct: 25 MFQLADIQMVRGGRTILAIDHLTIPTHELTVVLGHNGSGKSTLVSLLSGQQSPDNGQVTL 84
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVRR 122
G+S+ + LAK +A++PQ++ L V + V LGR P+ G R +ED +
Sbjct: 85 NGQSLSSLPSKTLAKAVAFLPQKLPTSAGLTVRELVRLGRFPWRGTLGRWRKEDELIIDA 144
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL+ V F + LSGGE Q+ +A +AQ++PV++LDEPT+ LD Q +M ++
Sbjct: 145 ALEKTGVSGFAHNLADELSGGERQRAWVAMLLAQQSPVLILDEPTSALDVHHQYQLMALL 204
Query: 183 KDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+L +G +I ++HDL LALR+ + LK G++
Sbjct: 205 AELNQTQGVGIIVILHDLNLALRYATHIVALKQGQI 240
>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 115 bits (284), Expect = 7e-25
Identities = 76/222 (34%), Positives = 125/222 (56%), Gaps = 10/222 (4%)
Query: 3 VKVKVIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CK 60
+ +++IE ++ ++Y +G LRG+NF GE + +LGPNGAGK+TL GIL+
Sbjct: 1 MNMRIIEAVDIRYTYPDGTEALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGILQPTS 60
Query: 61 GDVKVFGKSIRDMNRLELAKL---LAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRRE 115
G + + G+ + D ++ L K + V Q + RV + V G MGLS
Sbjct: 61 GKIMIDGEEL-DYSKSGLIKARQKVGIVFQNPDDQLFAPRVDEDVAFGPLN-MGLSEDEV 118
Query: 116 DLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ 175
+ E VR AL+ + + +E + SGGE ++VAIA IA + +++LDEPT+ LDP+
Sbjct: 119 E-ERVRDALQKVGMLGYESKPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRGA 177
Query: 176 IDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++R++ +L EG T+I HD+ LA + ++ + DGE+
Sbjct: 178 SQILRLLHNLNEEGMTIIISTHDVDLAPLYSDRIYIISDGEI 219
>pir||A69095 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622836|gb|AAB86176.1| (AE000928) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 311
Score = 115 bits (284), Expect = 7e-25
Identities = 79/218 (36%), Positives = 126/218 (57%), Gaps = 10/218 (4%)
Query: 7 VIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
+IE+ +L +SY +G LRG+N V GE + ++GPNGAGK+TL + GILK G+V
Sbjct: 1 MIELRDLSYSYPDGTPALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKPAAGEVI 60
Query: 65 VFGKSIRDMNRLELAKL---LAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLEA 119
+ G+ + D ++ EL K+ + V Q + V + V G +GL P E E
Sbjct: 61 IDGERV-DYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMN-LGL-PEDEVEER 117
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V +L+ + + +E+R LSGGE ++VAIA +A + +++LDEPT LDP++ ++
Sbjct: 118 VAESLEKVGMSGYENRAPHHLSGGEKKRVAIAGILAMKPEIMVLDEPTTGLDPETADGII 177
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
RI+ +L EG TV+ HD+ + +F E+ L GE+
Sbjct: 178 RILLELSREGITVMISSHDVEIISQFAERVFVLNSGEL 215
>emb|CAA29254.1| (X05810) fhuC product (AA 1-265) [Escherichia coli]
Length = 265
Score = 114 bits (283), Expect = 1e-24
Identities = 74/236 (31%), Positives = 129/236 (54%), Gaps = 6/236 (2%)
Query: 12 NLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSI 70
N+ F G+ +L + G+ ++G NG+GK+TLL+ + +G++ + + +
Sbjct: 16 NISFRVPGRTLLHPLCLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPL 75
Query: 71 RDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPR--REDLEAVRRALKLL 127
+ A+ +AY+PQ++ P + V + V +GR P+ G R D E V A+ L+
Sbjct: 76 ESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV 135
Query: 128 RVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIG 187
++ R++ +LSGGE Q+ IA +AQ++ +LLDEPT+ LD Q+DV+ ++ L
Sbjct: 136 GLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQ 195
Query: 188 E-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVKV 241
E G TVI V+HD+ +A R+ + + L+ GE+ T E + L YGI + +
Sbjct: 196 ERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMIYGIPMGI 251
>sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA >gi|7442619|pir||G69669
choline ABC transporter (ATP-binding protein) opuBA -
Bacillus subtilis >gi|2293447|gb|AAC14356.1| (AF008930)
ATPase [Bacillus subtilis] >gi|2635886|emb|CAB15378.1|
(Z99121) choline ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 381
Score = 114 bits (283), Expect = 1e-24
Identities = 69/228 (30%), Positives = 127/228 (55%), Gaps = 13/228 (5%)
Query: 7 VIEVSNLEFSYNG-KNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
++ + N+ +Y G K + VN + +GEF+ +GP+G GKTT ++ I +++ G +
Sbjct: 1 MLTLENVSKTYKGGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIF 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRR----PYMGLSPRREDLEAV 120
+ G++I D + +EL + + YV Q++ +F + + + P + P ++ E
Sbjct: 61 IDGENIMDQDPVELRRKIGYVIQQIG-----LFPHMTIQQNISLVPKLLKWPEQQRKERA 115
Query: 121 RRALKLLRV-EEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
R LKL+ + E+ DR LSGG+ Q++ + RA+A E P+IL+DEP LDP ++ +
Sbjct: 116 RELLKLVDMGPEYVDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQ 175
Query: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
K L KT++ V HD+ A++ ++ + LK GE+ + T D++
Sbjct: 176 EEFKKLQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDI 223
>sp|Q55281|MNTA_SYNY3 MANGANESE TRANSPORT SYSTEM ATP-BINDING PROTEIN MNTA
>gi|1084178|pir||S55046 ABC-type transport system
ATP-binding protein mntA [validated] - Synechocystis sp.
(PCC 6803) >gi|755076|gb|AAA68931.1| (L34630) mntA gene
product [Synechocystis sp.] >gi|1653001|dbj|BAA17918.1|
(D90910) Mn transporter MntA [Synechocystis sp.]
Length = 260
Score = 114 bits (282), Expect = 1e-24
Identities = 75/232 (32%), Positives = 126/232 (53%), Gaps = 15/232 (6%)
Query: 8 IEVSNLEFSYNGKNV-LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
I V + +YN + L V G ++GPNG+GK+TL + I G L+ +G V++
Sbjct: 10 ISVDGVSVTYNNARLALYNATCTVEPGTITALVGPNGSGKSTLFKSIMGFLQPSQGRVRI 69
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLS--PRREDLEAV 120
G S++ + + +L+AYVPQ E + + VFD V++GR YM + P +D V
Sbjct: 70 GGFSVQ---KAQKQQLMAYVPQADEVDWNFPVSVFDVVMMGRYGYMNVLRIPSAKDRRLV 126
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+L+ + + ++ DR + LSGG+ ++ +ARA+AQE VILLDEP +D K++ ++
Sbjct: 127 MESLERVGMVKYRDRQIGELSGGQKKRAFLARALAQEGKVILLDEPFTGVDVKTEKGMID 186
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLK-----DGEVTGIMTRDELE 227
++ +L EG T++ HDL F + + L G+ T++ LE
Sbjct: 187 LLMELRDEGHTILISTHDLASISTFCDHTILLNRTILAQGKTEETFTKENLE 238
>pir||C82485 iron(III) ABC transporter, ATP-binding protein VCA0230 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657625|gb|AAF96142.1| (AE004363) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 254
Score = 114 bits (282), Expect = 1e-24
Identities = 75/242 (30%), Positives = 124/242 (50%), Gaps = 4/242 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKGDVKV 65
+I++ L + K V+ + +G+ I+GPNGAGK+TLL + ++ + G V +
Sbjct: 1 MIQLEKLTKHFGTKRVVHDASAQFDKGQVTAIIGPNGAGKSTLLSMASRLVNRDAGKVWI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQ-RVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
+ + + N LA+ LA + Q V V + GR PY +D + + +A+
Sbjct: 61 EQRELVEWNTKALAQKLAVLRQSNVLNMRFTVRELTAFGRFPYSQGKLTTQDEQIINQAI 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+ L +E + + + LSGG+ Q IA +AQ+T + LDEP NNLD K + +M ++
Sbjct: 121 EYLDLETIQYQYLDELSGGQRQLAFIAMVMAQDTDYVFLDEPLNNLDIKHSLQIMSTLRR 180
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKVA 242
L E K V+ V+HD+ A + +K + LK GEV RD ++ VLS Y V
Sbjct: 181 LAHELNKAVVVVIHDINFASCYADKIVALKKGEVVATGSVRDVIQSEVLSAIYDTPFNVI 240
Query: 243 KL 244
++
Sbjct: 241 EM 242
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 113 bits (281), Expect = 2e-24
Identities = 73/223 (32%), Positives = 126/223 (55%), Gaps = 11/223 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
++EV +L Y K VLRG++F V +GE +LGPNGAGKTT ++ ++ +LK +G+VKV
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
G + + ++ + + +PQ + GFL V + + + Y G + ++L
Sbjct: 65 IGYKVPNECG-KIRERIGVMPQDYQ-GFLDLTVRENIEYFVKLYNGKETQVDEL------ 116
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
+ LL +E+ +++ ++ LSGG +++V IA A A ++ LDEPT LDPK++ IIK
Sbjct: 117 ISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIK 176
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ +G T+ H L A + ++ L G++ + T DE+
Sbjct: 177 MMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEI 219
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 113 bits (281), Expect = 2e-24
Identities = 73/223 (32%), Positives = 126/223 (55%), Gaps = 11/223 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
++EV +L Y K VLRG++F V +GE +LGPNGAGKTT ++ ++ +LK +G+VKV
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
G + + ++ + + +PQ + GFL V + + + Y G + ++L
Sbjct: 65 IGYKVPNECG-KIRERIGVMPQDYQ-GFLDLTVRENIEYFVKLYNGKETQVDEL------ 116
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
+ LL +E+ +++ ++ LSGG +++V IA A A ++ LDEPT LDPK++ IIK
Sbjct: 117 ISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIK 176
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ +G T+ H L A + ++ L G++ + T DE+
Sbjct: 177 MMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEI 219
>gb|AAC27811.1| (U64516) unknown [Shigella dysenteriae]
Length = 256
Score = 113 bits (281), Expect = 2e-24
Identities = 82/259 (31%), Positives = 133/259 (50%), Gaps = 14/259 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+I NL +S G+ + V+ GE + ILGPNGAGK+TLLR + G L+ G+ ++
Sbjct: 1 MISAQNLVYSLQGRRLTDNVSLTFPGGEIVAILGPNGAGKSTLLRQLTGYLQPDSGECRL 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
F K + + + ELAK A + Q F V + + +GR P+ + E + +
Sbjct: 61 FNKPLNEWSITELAKHRAVMRQNSHMAFPFSVQEVIQMGRHPHRTGNQDNE----TAQIM 116
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQ---ETPV---ILLDEPTNNLDPKSQIDV 178
L + +R + LSGGE Q+V +AR + Q TP + LDEPT+ LD Q +
Sbjct: 117 ALCDCQALANRDYRQLSGGEQQRVQLARLLVQLWEPTPSPKWLFLDEPTSALDIHHQQHL 176
Query: 179 MRIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEV-TGIMTRDELEDRVLSETYG 236
R+++ L+ E + V V+HDL LA R+ ++ + ++ G+V +D L + L+ YG
Sbjct: 177 FRLLRQLVHERQFNVCCVLHDLNLAARYADRIVLMQKGKVIANGKPQDVLTQQELTMLYG 236
Query: 237 ISVKVAKLGREIVPLVGAD 255
+ V + PL+ D
Sbjct: 237 ADITVLEDPANHSPLIVLD 255
>sp|P45092|ARTP_HAEIN ARGININE TRANSPORT ATP-BINDING PROTEIN ARTP >gi|1073857|pir||D64188
arginine transport protein artP - Haemophilus influenzae
(strain Rd KW20) >gi|972900|gb|AAA95977.1| (U17295)
ArtP [Haemophilus influenzae] >gi|1574105|gb|AAC22831.1|
(U32797) arginine ABC transporter, ATP-binding protein
(artP) [Haemophilus influenzae Rd]
Length = 243
Score = 113 bits (280), Expect = 2e-24
Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 10/230 (4%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
I V NL F Y L +N + EG+ +V+LGP+GAGK+TL+R + + K G++ +
Sbjct: 3 IRVKNLNFFYGSSQTLFDINLEAEEGDTVVLLGPSGAGKSTLIRTLNLLEVPKSGELSIA 62
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF--------LRVFDFVLLGRRPYMGLSPRREDLE 118
N + K + + Q V F L V + ++ G+S +
Sbjct: 63 NNEFNLSNAMANPKAIQQLRQDVGMVFQQYHLWPHLTVIENLIEAPMKVRGVSENEAKTD 122
Query: 119 AVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
A+ LK LR+E+ DR LSGG+ Q+VAIARA+ + V+L DEPT LDP+ V
Sbjct: 123 AME-LLKRLRLEQLADRFPLHLSGGQQQRVAIARALMMKPQVLLFDEPTAALDPEITAQV 181
Query: 179 MRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
+ IIK+L G T + V H++ +A + K ++++ G++ + + D E+
Sbjct: 182 VDIIKELQETGITQVIVTHEVNVAQKVATKVVYMEQGKIVEMGSADCFEN 231
>sp|Q57399|YE70_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1470
>gi|1074080|pir||F64125 ferric enterobactin transport
ATP-binding protein homolog HI1470 - Haemophilus
influenzae (strain Rd KW20) >gi|1574311|gb|AAC23118.1|
(U32825) iron chelatin ABC transporter, ATP-binding
protein, putative [Haemophilus influenzae Rd]
Length = 253
Score = 113 bits (280), Expect = 2e-24
Identities = 80/231 (34%), Positives = 118/231 (50%), Gaps = 22/231 (9%)
Query: 6 KVIEVSNLEFSYNGKNVL-RGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
K + V NL F Y +N L + +NFD+ +G+ L +LG NG GK+TLL + GI +
Sbjct: 3 KALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHR-----P 57
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL-RVFDFVLLGRRPYMGL--SPRREDLEAVR 121
+ GK +E+ + + +VPQ F V D VL+GR ++ P+ D +
Sbjct: 58 IQGK-------IEVYQSIGFVPQFFSSPFAYSVLDIVLMGRSTHINTFAKPKSHDYQVAM 110
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
+AL L + R +LSGG+ Q + IARAIA E +ILLDEPT+ LD +Q V+ +
Sbjct: 111 QALDYLNLTHLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSL 170
Query: 182 IKDLI-GEGKTVITVMHDLTLALRFGEKFLFL-----KDGEVTGIMTRDEL 226
+ DL + TV+ H + K L L K GE I+T + L
Sbjct: 171 LIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFKFGETRNILTSENL 221
>gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphylococcus aureus]
Length = 261
Score = 113 bits (280), Expect = 2e-24
Identities = 83/246 (33%), Positives = 126/246 (50%), Gaps = 18/246 (7%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
V E+ N+ + Y+ K VL +N + +GEFL I+GPNGAGK+TLL+ I G+L + G++ V
Sbjct: 10 VFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGEIFV 69
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEP---GF-LRVFDFVLLGRRPYMGLSP--RREDLEA 119
G D + + L+YV Q+ GF V + VL G L +D E
Sbjct: 70 GGI---DFKNKKTSIKLSYVSQKANAFNSGFPASVKEVVLSGLTKTKRLFQTFNSKDNEK 126
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V + L+ L + + + + LSGG+ Q+V IARA+ E V++LDEPTN +D K +
Sbjct: 127 VIKVLERLNISDLIHKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEFY 186
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLK-----DGEVTGIMTRDELEDRVLSET 234
+ L EG T+I V HD+ + + L G + DE+E +S+
Sbjct: 187 NTLDQLKQEGITIILVTHDIGVVADTATEVACLNKHLHFHGTTDEFKSLDEVE---ISKI 243
Query: 235 YGISVK 240
YG V+
Sbjct: 244 YGHPVR 249
>gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Streptococcus pneumoniae]
Length = 242
Score = 113 bits (280), Expect = 2e-24
Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 9/217 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+IE N+ Y K+VLR VN + +GEF+V++GP+G+GKTT+L+ I +L+ G++ +
Sbjct: 1 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVE--PGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
GK I+D + EL YV Q + P + L+ P M + E +
Sbjct: 61 DGKRIKDYDERELRLSTGYVLQAIALFPNLTVAENIALI---PEMKGWSKEEITKKTEEL 117
Query: 124 LKL--LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
L L V E+ R+ LSGGE Q+V I RA+ + + L+DEP + LD S+ + +
Sbjct: 118 LAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISRKQLQVL 177
Query: 182 IKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
K+L E G T I V HD AL+ ++ L+DGE+
Sbjct: 178 TKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEI 214
>pir||A81962 probable ABC transporter ATP-binding subunit NMA0448 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379196|emb|CAB83745.1| (AL162753) putative ABC
transporter ATP-binding subunit [Neisseria meningitidis
Z2491]
Length = 252
Score = 113 bits (280), Expect = 2e-24
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
+I + N+ + +L ++ D+ EG ++GPNGAGK+TL +A + + G +
Sbjct: 1 MITIRNVSYRIGTHPILDNISLDIPEGGITALIGPNGAGKSTLFSFMARLRPLESGSIAY 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVE-PGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
GK++ ELA+ L+ + Q + V D ++ GR PY P E V A+
Sbjct: 61 RGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYPYHQGRPTAECRRIVNGAI 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
+ +++ DR + LSGG+ Q+ IA Q T +LLDEP NNLD +M+I++
Sbjct: 121 EEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLDEPLNNLDMYHARSLMQILQK 180
Query: 185 LIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
L E K T + V+HD+ A + + + +K+G+ T +E+
Sbjct: 181 LTREHKRTTVAVLHDINQAAAYADHVVAMKNGKAVLTGTPEEV 223
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 113 bits (279), Expect = 3e-24
Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 12/215 (5%)
Query: 19 GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRLE 77
GK + ++ D+ +GEF+ +GP+G GKTT ++ I +++ G + + G++I + + +E
Sbjct: 14 GKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIFIDGENIMEQDPVE 73
Query: 78 LAKLLAYVPQRVEPGFLRVFDFVLLGRR----PYMGLSPRREDLEAVRRALKLLRV-EEF 132
L + + YV Q++ +F + + + P + P + E R LKL+ + E+
Sbjct: 74 LRRKIGYVIQQIG-----LFPHMTIQQNISLVPKLLKWPEEKRKERARELLKLVDMGPEY 128
Query: 133 EDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKT 191
DR LSGG+ Q++ + RA+A E P+IL+DEP LDP ++ + K L KT
Sbjct: 129 LDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKLQRTLNKT 188
Query: 192 VITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
++ V HD+ A++ ++ + LK GE+ + T DE+
Sbjct: 189 IVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEI 223
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 113 bits (279), Expect = 3e-24
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 21/259 (8%)
Query: 7 VIEVSNLEFSY--NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDV 63
++E+ NL Y NG L +N + + EF+ +LGP+G GKTTL++ + G L K G++
Sbjct: 5 ILEIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEI 64
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
F K I + + + + P + VFD + G R M +P+ E V+ +
Sbjct: 65 YFFSKEISKTSPNKREINTVFQNYALFP-HMNVFDNISFGLR--MKKTPKDIIKEKVKTS 121
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L L+ + ++ R + LSGG+ Q+VAIARA+ E ++LLDEP + LD K + ++ + +K
Sbjct: 122 LSLIGMPKYAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQKELK 181
Query: 184 DLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL--------------ED 228
+ + G T I V HD AL ++ + + +G + I T +E+ E
Sbjct: 182 KIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEIYNEPKTKFVADFIGES 241
Query: 229 RVLSETYGISVKVAKLGRE 247
+ TY + V+ LG E
Sbjct: 242 NIFDGTYKKELVVSLLGHE 260
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 113 bits (279), Expect = 3e-24
Identities = 71/216 (32%), Positives = 119/216 (54%), Gaps = 13/216 (6%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
I + N+ Y ++ ++ ++ GEF +LGP+G GKTTLLR IAG +G F
Sbjct: 5 ISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGEIKFD 64
Query: 68 KSIRDMNRLELAKL-LAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA--- 123
K + +N + K + V Q +F + + GL R+E+ E++++
Sbjct: 65 KDV--INNIPAHKRNIGMVFQNYA-----IFPHMTVRENVEYGLKLRKENKESMKKKVDE 117
Query: 124 -LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
L ++++EE++DR+ + LSGG+ Q+VA+ARAI V+L+DEP +NLD K +I++ I
Sbjct: 118 MLHVVKIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAI 177
Query: 183 KDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
KD+ G T + V HD AL ++ +K+G +
Sbjct: 178 KDIQRHVGITTVYVTHDQEEALAVSDRIAVMKNGVI 213
>gb|AAD41066.1|AF128999_2 (AF128999) SitB [Salmonella typhimurium]
Length = 273
Score = 113 bits (279), Expect = 3e-24
Identities = 71/213 (33%), Positives = 118/213 (55%), Gaps = 10/213 (4%)
Query: 8 IEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
I V + +Y NG LR F V G ++G NG+GK+TL + + G + +GD+ +
Sbjct: 6 ITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITI 65
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGL--SPRREDLEAV 120
+S+ N+ L+AYVPQ E + + V D V++GR +MG P D V
Sbjct: 66 LQQSV---NKALKKNLIAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACV 122
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
AL + ++E+ R + LSGG+ ++V +ARAIAQ+ VILLDEP +D K++ ++
Sbjct: 123 DAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDGQVILLDEPFTGVDVKTEARIID 182
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLK 213
++++L EG+T++ H+L F + + +K
Sbjct: 183 LLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIK 215
>sp|Q56993|HMUV_YERPE HEMIN TRANSPORT SYSTEM ATP-BINDING PROTEIN HMUV
>gi|7445914|pir||T12073 ATP-binding protein - Yersinia
pestis >gi|1407801|gb|AAC64870.1| (U60647) ATP-binding
protein [Yersinia pestis]
Length = 266
Score = 112 bits (278), Expect = 4e-24
Identities = 82/258 (31%), Positives = 134/258 (51%), Gaps = 14/258 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDV 63
V ++E S+L + + ++ V+ + GE + I+GPNGAGK+TLLR + G L G+
Sbjct: 9 VALLEASHLHYHVQQQALINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGEC 68
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
+ G+++ LA+ A + Q E F V + + +GR PY G S R+ L+ V
Sbjct: 69 HLLGQNLNSWQPKALARTRAVMRQYSELAFPFSVSEVIQMGRAPYGG-SQDRQALQQVMA 127
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIA-----QETP-VILLDEPTNNLDPKSQI 176
L + + + RV LSGGE Q+V +AR +A Q TP + LDEPT+ LD Q
Sbjct: 128 QTDCLALAQRDYRV---LSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQ 184
Query: 177 DVMRIIKDLI-GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSET 234
+R+++ L E V V+HDL LA + ++ + L G++ T +E L L++
Sbjct: 185 HTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLAQGKLVACGTPEEVLNAETLTQW 244
Query: 235 YGISVKVAKLGREIVPLV 252
Y + V++ +P +
Sbjct: 245 YQADLGVSRHPESALPQI 262
>dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 259
Score = 112 bits (278), Expect = 4e-24
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 22/239 (9%)
Query: 6 KVIEVSNLEFSYNGKN----VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CK 60
K++EV +L+ +Y KN L+GVNFD+ GEFL I+GP+G+GKTTLL CIA I+K
Sbjct: 6 KLLEVQDLQKNYGKKNNLTKALKGVNFDILPGEFLGIMGPSGSGKTTLLNCIATIIKPTS 65
Query: 61 GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLG-----RRPYMGLSPRRE 115
G V + GK+I + +LAK Y R+ G+L DF LL + L+
Sbjct: 66 GRVLLHGKNISAFDSKDLAK---YRGSRI--GYL-FQDFELLDNLTGQENILLPLAIHGV 119
Query: 116 DLEAVRRAL----KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLD 171
D R L +L + + + +SGG+ Q+VA AR + + ++L DEPT LD
Sbjct: 120 DFTKARVKLDELASILDIADILHKFPSQMSGGQKQRVAAARCLISDPDIVLADEPTGALD 179
Query: 172 PKSQIDVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
+S +M ++ + G+T++ V HD A F + LF++DG + + R + E R
Sbjct: 180 TRSARTLMTKLESINRSSGRTILMVSHDPN-AASFCSRILFIQDGVIFHELRRKQEESR 237
>sp|P44662|FECE_HAEIN IRON(III) DICITRATE TRANSPORT ATP-BINDING PROTEIN FECE HOMOLOG
>gi|1074938|pir||F64063 ATP-binding protein yfeB homolog
- Haemophilus influenzae (strain Rd KW20)
>gi|1573329|gb|AAC22020.1| (U32720) iron (chelated)
transporter, ATP-binding protein (yfeB) [Haemophilus
influenzae Rd]
Length = 306
Score = 112 bits (277), Expect = 5e-24
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 9/233 (3%)
Query: 18 NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIRDMNRL 76
NG + + F + G ++G NG+GK+TL + I G++K + G++K+ I +
Sbjct: 19 NGHTAIHNMTFSLNSGTICALVGVNGSGKSTLFKSIMGLVKPQQGEIKLCDLPISQALK- 77
Query: 77 ELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLS--PRREDLEAVRRALKLLRVEE 131
L+AYVPQ E + + V+D V++GR YM P+ D + V+ A++ + +E
Sbjct: 78 --RNLVAYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFLRIPKAIDKQKVQEAMQRVNIEH 135
Query: 132 FEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKT 191
R + LSGG+ ++V +ARA+AQ++P+ILLDEP +D K++ ++ +++ L EG
Sbjct: 136 LAHRQIGELSGGQKKRVFLARALAQQSPIILLDEPFTGVDVKTENAIVDLLQQLREEGHL 195
Query: 192 VITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKVAKL 244
++ H+L F ++ + + + T D L +G ++ KL
Sbjct: 196 ILVSTHNLGSVPDFCDQVVMINRTVIAAGKTEDTFNQHNLEIVFGGVLRHIKL 248
>emb|CAB59657.1| (AL132674) putative ABC transport protein, ATP-binding subunit.
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 112 bits (277), Expect = 5e-24
Identities = 81/215 (37%), Positives = 119/215 (54%), Gaps = 11/215 (5%)
Query: 8 IEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
++VS L F+Y +G L GV+F V GE + +LGPNGAGKTTL+ + GIL G V V
Sbjct: 16 LDVSGLAFAYPDGHQALFGVDFCVARGERVALLGPNGAGKTTLVLHLNGILTGGTGTVTV 75
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLEA-VRR 122
G + N E+ + + V Q + V + V G + +LEA V R
Sbjct: 76 AGLPVDKRNMAEIRRRVGIVFQDPDDQLFMPTVREDVAFGPA---AAGVKGAELEACVDR 132
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL L+ + EF+DR LS G+ ++VA+A +A E +++LDEP++NLDP S+ ++ I+
Sbjct: 133 ALTLVGMAEFKDRPPHHLSFGQRRRVAVATVLAMEPEILVLDEPSSNLDPASRRELADIL 192
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ L TV+ V HDL AL + L L DG +
Sbjct: 193 RSL---DVTVLMVTHDLPYALELCPRALILSDGAI 224
>emb|CAC11378.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 239
Score = 112 bits (277), Expect = 5e-24
Identities = 78/243 (32%), Positives = 126/243 (51%), Gaps = 12/243 (4%)
Query: 4 KVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
K+ IE +++ S+ K L G++FDV E + ++GPNGAGK+T L+ +AG++K G
Sbjct: 3 KMNCIEFNDVTKSFGTKKALDGLSFDVECQESVALIGPNGAGKSTTLKILAGLIKPDSGS 62
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLE-AVR 121
VKV G D + +E +L+ Y+P+ P + Y+G + EDLE V
Sbjct: 63 VKVGG---FDPDSIEAKRLMGYLPEDASP----YLTLSVKENLEYIGALRKTEDLEQKVE 115
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
L L+ + E+ + + TLS G QK++IA AI + ++LLDEP N LD +Q +I
Sbjct: 116 FLLNLMELNEYRNSRVSTLSRGNRQKLSIALAIIHDPKIMLLDEPLNYLDIPTQ---EKI 172
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKV 241
IK T + H +++A RF + + + G DEL++ E I +
Sbjct: 173 IKYFNSMNATFLVSTHIMSIAERFTRRAIIINSGRQIWTGQIDELKEMSREENLTIEGVI 232
Query: 242 AKL 244
+K+
Sbjct: 233 SKI 235
>emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-binding protein
[Thermoplasma acidophilum]
Length = 372
Score = 112 bits (277), Expect = 5e-24
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 5/221 (2%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKVFGK 68
+ NL Y K +L+ N V +GEF VILG +G+GKTTLLR IAG++ G + + G
Sbjct: 5 IENLTARYGDKYILKNFNLRVEDGEFFVILGSSGSGKTTLLRSIAGLIPIDDGRILIDGN 64
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLR 128
+ D+ + + + + P + V+D + L + + P+ E + V ++L
Sbjct: 65 DVTDLYPSDRNIAMVFQNFALYP-HMTVYDNISLNLK--IKHVPKDEIKKKVSDVAEMLH 121
Query: 129 VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE 188
+ + + + LSGGE Q+V IARA+ ++ V L+DEP +NLD K + +++ ++ +
Sbjct: 122 ISQHLQKYPRQLSGGEQQRVGIARAMVRDPSVFLMDEPLSNLDAKLRREMLGELRSFHEK 181
Query: 189 -GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
KT+I V HD A+ ++ L L G++ + T DEL D
Sbjct: 182 VKKTIIYVCHDQDEAMALADRILVLNQGQIMQLGTPDELYD 222
>pir||C64496 ABC transporter ATP-binding protein - Methanococcus jannaschii
>gi|1592193|gb|AAB99589.1| (U67597) cobalt transport
ATP-binding protein (cbiO) [Methanococcus jannaschii]
Length = 278
Score = 111 bits (276), Expect = 6e-24
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 16/212 (7%)
Query: 1 MKVKVKVIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-K 58
MK ++++VS + Y NG L VN ++ + E + ILGPNGAGKTTLL+ + G++
Sbjct: 1 MKEIYRLVDVS---YKYPNGSIALDNVNLNIYKNEVVAILGPNGAGKTTLLKILDGLVFP 57
Query: 59 CKGDVKVFGKSIRD--MNRLELAK----LLAYVPQRVEPGFLR--VFDFVLLGRRPYMGL 110
KG+V GK + D + EL K + +V Q + V+D V + L
Sbjct: 58 DKGEVYFEGKKLTDEILRDKELMKEFRRKVGFVFQNPDVMLFNPTVWDEVAFSP---LHL 114
Query: 111 SPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNL 170
+ + +E + LK +++ +DR LSGGE +KV+I+ ++ E VIL+DEPT+ L
Sbjct: 115 YSKEKAIEVTDKTLKDMKIYHLKDRHPYNLSGGEKKKVSISCILSVEPEVILMDEPTSAL 174
Query: 171 DPKSQIDVMRIIKDLIGEGKTVITVMHDLTLA 202
DPKS+ ++M +IK GKTV+ V HDL LA
Sbjct: 175 DPKSRAEIMNLIKSFKECGKTVVLVTHDLNLA 206
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 111 bits (276), Expect = 6e-24
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 6/227 (2%)
Query: 3 VKVKVIEVSNLEFSYNGKNV-LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK- 60
+++ + + N+ Y K V ++ N V + EF+V+LGP+G GKTT LR IAG+ +
Sbjct: 1 MRMAQVVLENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITD 60
Query: 61 GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
G + + GK + D+ + + + + P + V++ + G + + P+ E V
Sbjct: 61 GKIYIDGKVVNDVEPKDRDIAMVFQNYALYP-HMTVYENMAFGLK--LRKYPKDEIDRRV 117
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R A K+L +E DR + LSGG+ Q+VA+ RAI + V L DEP +NLD K ++ +
Sbjct: 118 REAAKILGIENLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRS 177
Query: 181 IIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+K L T+I V HD A+ +K + +KDGE+ I T E+
Sbjct: 178 ELKKLHHRLQATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEI 224
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 111 bits (276), Expect = 6e-24
Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 6/225 (2%)
Query: 8 IEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
IE +E Y G +RGV+F + EGE + +LGP+G+GKTT+LR IAG+ + KGDV +
Sbjct: 3 IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWI 62
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALK 125
GK + D+ + L + + + V+D V G R P+ E VR L+
Sbjct: 63 GGKRVTDLPPQKRNVGLVFQNYALFQ-HMTVYDNVSFGLREKR--VPKDEMDARVRELLR 119
Query: 126 LLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL 185
+R+E + +R LSGG+ Q+VA+ARA+A V+L DEP +D + + ++ ++ +
Sbjct: 120 FMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQV 179
Query: 186 IGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
E G T + V HD AL ++ L L +G V T +E+ ++
Sbjct: 180 HDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEK 224
>gb|AAK40808.1| Iron (III) ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 219
Score = 111 bits (274), Expect = 1e-23
Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 29/234 (12%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
++ + N+ GK +L ++F +G VILGPNG+GKTTLLR I G++K G+++V
Sbjct: 1 MLTLRNISVRLGGKLILSSISFSAVKG-INVILGPNGSGKTTLLRAIIGMIKYDGEIRVD 59
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
G+ ++YVP ++V D + GR +R + E+ +K
Sbjct: 60 GE-------------ISYVPAEFFSPSMKVLDVLKAGR--------KRANYESY---IKE 95
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
L VE+F +R TLS GE + + + +A+A+ VI +DEP +NLD K++ VM I+K
Sbjct: 96 LNVEKFLERDFSTLSSGERKLILVTKALAEGDNVI-MDEPLSNLDVKNKFFVMNILKKF- 153
Query: 187 GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
KT + H+L LR+ +K + + G++ +L D +LS YGI K
Sbjct: 154 -NHKTFLITSHELE-TLRYADKAIVINKGKLEYDGGVSDLSDDLLSNVYGIKFK 205
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 111 bits (274), Expect = 1e-23
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 5/221 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
I++ N+ + L +N + +GEF+ +LGP+G+GK+TLL IAGI K G +
Sbjct: 4 IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFD 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
K + ++ + L + + P + V+ + + +PR E + VR K+
Sbjct: 64 EKDVTELPPKDRNVGLVFQNWALYP-HMTVYKNIAFPLE--LRKAPREEIDKKVREVAKM 120
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
L +++ +R LSGG+ Q+VAIARA+ +E V+LLDEP +NLD +++V +K L
Sbjct: 121 LHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
Query: 187 GE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
E G T + V HD AL ++ +++GE+ + T DE+
Sbjct: 181 KELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEV 221
>sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN PEB1C
>gi|11277299|pir||A81366 ABC-type amino-acid transporter
ATP-binding protein Cj0922c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968359|emb|CAB73179.1|
(AL139076) ABC-type amino-acid transporter ATP-binding
protein [Campylobacter jejuni]
Length = 242
Score = 110 bits (273), Expect = 1e-23
Identities = 71/219 (32%), Positives = 122/219 (55%), Gaps = 13/219 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
+IE+ N+ Y +VL+ +N V EGE LVI+GP+G+GK+T +RC+ G+ + G+V V
Sbjct: 1 MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query: 66 FGKSIRDMNRLELA-KLLAYVPQRVE--PGFLRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
+ N++E+ K A V Q P + + L + ++ EA
Sbjct: 61 NNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMK-----LQKKSKKEAEET 115
Query: 123 ALKLLRVEEFEDRVM---KTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
A K L+V D+ TLSGG+ Q+VAIAR++ + P IL DEPT+ LDP++ +V+
Sbjct: 116 AFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVL 175
Query: 180 RIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEV 217
++K++ + T++ V H++ A ++ +F++DG +
Sbjct: 176 DVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAI 214
>pir||D35718 phnC protein - Escherichia coli >gi|147196|gb|AAA24339.1| (J05260)
HisP-like nucleotide binding protein (phnC) [Escherichia
coli]
Length = 262
Score = 110 bits (273), Expect = 1e-23
Identities = 77/231 (33%), Positives = 130/231 (55%), Gaps = 23/231 (9%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL---KCKGD- 62
+I V L ++N L V+ ++ GE + +LGP+G+GK+TLLR ++G++ K G
Sbjct: 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSH 63
Query: 63 VKVFGKSIRDMNRL--ELAKLLA---YVPQRVE-PGFLRVFDFVLLGRRPYMGLSP---- 112
+++ G++++ RL ++ K A Y+ Q+ L V + VL+G +G +P
Sbjct: 64 IELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGA---LGSTPFWRT 120
Query: 113 -----RREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPT 167
RE + +AL + + F + + TLSGG+ Q+VAIARA+ Q+ VIL DEP
Sbjct: 121 CFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPI 180
Query: 168 NNLDPKSQIDVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+LDP+S VM ++D+ +G TV+ +H + ALR+ E+ + L+ G V
Sbjct: 181 ASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHV 231
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 110 bits (273), Expect = 1e-23
Identities = 80/225 (35%), Positives = 130/225 (57%), Gaps = 16/225 (7%)
Query: 5 VKVIEVSNL----EFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
+KVIE+ ++ +Y + L GV+ +V GEF+ I+GP+G+GK+TLL I + K
Sbjct: 1 MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLNMIGCLDKPT 60
Query: 60 KGDVKVFGKSIRDMNRLELAKL----LAYVPQRVE--PGFLRVFDFVLLGRRPYMGLSPR 113
KG+V + G ++ EL KL + ++ Q+ P + + L + G++ R
Sbjct: 61 KGEVIINGVKTSGLSDRELTKLRRDSIGFIFQQYNLIPTLTALENVEL--PMIFRGVA-R 117
Query: 114 REDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
E + LK++ +EE DR + +SGG+ Q+VAIARA+A ++L DEPT NLD K
Sbjct: 118 AERERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTGNLDTK 177
Query: 174 SQIDVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
S VM I+K+L E G TV+ V HD +L+ + ++ + ++DG+V
Sbjct: 178 SGRQVMGILKNLNEENGVTVVLVTHDPSLS-EYADRVIRIRDGKV 221
>pir||G72064 ABC transporter ATPase - Chlamydophila pneumoniae (strain CWL029)
>gi|4376833|gb|AAD18682.1| (AE001639) ABC Transporter
ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163386|gb|AAF73641.1| (AE002181) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978913|dbj|BAA98748.1| (AP002547) ABC transporter
ATPase [Chlamydophila pneumoniae J138]
Length = 245
Score = 110 bits (273), Expect = 1e-23
Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 23/241 (9%)
Query: 8 IEVSNLEFSYNGK--NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVK 64
I L F Y K N++ V+F V +G+F+ I+GPNG GK+TL I G+L G +K
Sbjct: 5 ILAEGLAFRYGSKGPNIIHDVSFSVYDGDFIGIIGPNGGGKSTLTMLILGLLTPTFGSLK 64
Query: 65 VF-----GKSIRDMNRLELAKLLAYVPQRV--EPGF-LRVFDFVLLGRRPYMGLSPR--R 114
F GK M + +VPQ +P F + V D VL GR + + +
Sbjct: 65 TFPSHSAGKQTHSM--------IGWVPQHFSYDPCFPISVKDVVLSGRLSQLSWHGKYKK 116
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
+D EAV AL L+ + + LSGG++Q+V +ARA+A +++LDEPT N+DP +
Sbjct: 117 KDFEAVDHALDLVGLSDHHHHCFAHLSGGQIQRVLLARALASYPEILILDEPTTNIDPDN 176
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSET 234
Q ++ I+K L T++ V HDL + K +F + +T + L D+
Sbjct: 177 QQRILSILKKL-NRTCTILMVTHDLHHTTNYFNK-VFYMNKTLTSLADTSTLTDQFCCHP 234
Query: 235 Y 235
Y
Sbjct: 235 Y 235
>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445942|pir||B69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 228
Score = 110 bits (272), Expect = 2e-23
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 28/234 (11%)
Query: 5 VKVIEVSNLEFSYNGK----NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-C 59
+KV+E+ N+ Y + L GV+ DV EGEF+VI+GP+G+GK+TLL I + K
Sbjct: 1 MKVVELRNVYKIYRTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKSTLLNLIGCLDKPT 60
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGF----------LRVFDFVLLGRRPYMG 109
+G+V + G +N L +L +R GF L + V L + G
Sbjct: 61 EGEVLINGVETSSLNDNRLTEL-----RRDTIGFIFQTYNLIPTLTALENVELPMI-FKG 114
Query: 110 LSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNN 169
+ RRE E + LK + +E+ +R +SGG+ Q+VAIARA+A ++L DEPT N
Sbjct: 115 VG-RREREERAKELLKNVGLEKEMNRKPNEMSGGQQQRVAIARALANNPKILLCDEPTGN 173
Query: 170 LDPKSQIDVMRIIK---DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGI 220
LD KS VM II+ +++ G TVI V HD +LA ++G++ + L+DG++ +
Sbjct: 174 LDTKSGEQVMEIIRHQNEVL--GVTVILVTHDPSLA-KYGDRVIRLRDGKIESV 224
>gb|AAB01532.1| (U38418) ProV [Bacillus subtilis]
Length = 404
Score = 110 bits (272), Expect = 2e-23
Identities = 68/221 (30%), Positives = 121/221 (53%), Gaps = 12/221 (5%)
Query: 13 LEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIR 71
LE GK + VN + +GEF+ +GP+G GKTT ++ I +++ G + + G++I
Sbjct: 9 LENIKGGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIFIDGENIM 68
Query: 72 DMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRR----PYMGLSPRREDLEAVRRALKLL 127
+ + EL + + YV Q++ +F + + + P + P + E R LKL+
Sbjct: 69 EQDPEELRRKIGYVFQQIG-----LFPHMTIQQNISLVPKLLKWPEQHRKERARELLKLV 123
Query: 128 RV-EEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
+ E+ DR LSGG+ Q++ + RA+A+E P+IL+DEP LDP ++ + K L
Sbjct: 124 DMGPEYLDRYPHELSGGQQQRIGVLRALAREPPLILMDEPFGALDPITRDSLQEEFKKLQ 183
Query: 187 GE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
KT++ V HD+ A++ ++ + LK GE+ + T D++
Sbjct: 184 KTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDI 224
>gb|AAC68697.1| (AF097414) EfmC [Enterococcus faecium]
Length = 247
Score = 109 bits (271), Expect = 2e-23
Identities = 74/238 (31%), Positives = 120/238 (50%), Gaps = 11/238 (4%)
Query: 16 SYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIRDMN 74
+Y GK VL+ +N + + I+GPNGAGK+T ++ + ++ G V + G+ + +
Sbjct: 13 AYQGKTVLKTINLTINPQKITGIIGPNGAGKSTFMKSLLELIPATTGKVTLSGQPVNSVR 72
Query: 75 RLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYM--GLSPRREDLEAVRRALKLLRV 129
K +AYV QR E + V VLLG P + G P + E R+ALK + +
Sbjct: 73 -----KKIAYVEQRSELDLSFPVMVIGVVLLGTYPSLRIGQRPGKPGKERARQALKKVGL 127
Query: 130 EEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEG 189
EE+ R + LSGG+LQ+V IARA+AQ I LDEP +D S+ + I+++L G
Sbjct: 128 EEYAKRQISELSGGQLQRVFIARALAQGAEWIFLDEPFVGIDALSERKIFDILQELKNSG 187
Query: 190 KTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKVAKLGRE 247
KT++ V H L + ++ + + + ++ L YG ++ G E
Sbjct: 188 KTILIVHHFLHKVDEYFDEVILVNKQLIASGPVQESFTSEDLQLPYGEIIRHLVKGGE 245
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 109 bits (271), Expect = 2e-23
Identities = 75/221 (33%), Positives = 121/221 (53%), Gaps = 5/221 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
+ + N+ ++ VL+ V+ D+ +GEF ILGP+G GKTTLLR IAG + GDV +
Sbjct: 6 VSIKNVSKFFDDFQVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEGVESGDVLLD 65
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
GKSI ++ + + + + P L VF+ + + + E + V L L
Sbjct: 66 GKSILNLPPNKRPVNIIFQNYALFP-HLTVFENIAFPLK--LKKLSENEINQRVNELLSL 122
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
+R+EE ++ LSGG+ Q+VAIARA+A E V+LLDEP + LD K + +++ + +L
Sbjct: 123 IRMEEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVELDNLH 182
Query: 187 GE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
G T I V HD A+ ++ + +GE+ + T E+
Sbjct: 183 DRVGITFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEV 223
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 109 bits (271), Expect = 2e-23
Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 6/214 (2%)
Query: 19 GKNV-LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIRDMNRL 76
GK V L+G++ ++ +GE +V+LGP+G GKTT LR +AG+ + G V G+ + +
Sbjct: 16 GKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRVYFDGRDVTGLPPK 75
Query: 77 ELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRV 136
+ + + + P +RVFD + + + PR E + VR A +LL ++ DR
Sbjct: 76 DRNVAMVFQSYALWP-HMRVFDNIAFPLK--IKKLPRDEIVRRVRWAAELLEIDHLLDRY 132
Query: 137 MKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITV 195
LSGG+ Q+VA+ARAI E V+L+DEP +NLD +I + IK L G T+I V
Sbjct: 133 PHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIKKLQRRLGVTMIYV 192
Query: 196 MHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
HD A+ G++ + + GE+ + T ++ R
Sbjct: 193 THDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHR 226
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 109 bits (271), Expect = 2e-23
Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
VI +S + S++GK ++ +N DV GEFL ILGP+G GKTT+LR IAG +G + +
Sbjct: 17 VIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILL 76
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALK 125
+ + + + + + P + VF+ V G R M P+ E V AL+
Sbjct: 77 DDQDVTQVPAEQRHVNTVFQSYALFP-HMTVFENVAFGLR--MQKVPQSEIEPRVMEALR 133
Query: 126 LLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL 185
++R+ E R LSGG+ Q++AIARA+ + V+LLDE + LD K + + +K L
Sbjct: 134 MVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQL 193
Query: 186 IGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ G T I V HD AL ++ + ++ G++
Sbjct: 194 QRQLGITFIFVTHDQEEALSMSDRIIVMRSGKI 226
>pir||D83281 histidine transport protein HisP PA2926 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949020|gb|AAG06314.1|AE004718_11 (AE004718)
histidine transport protein HisP [Pseudomonas
aeruginosa]
Length = 255
Score = 109 bits (271), Expect = 2e-23
Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 17/235 (7%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
++V ++ Y VLRGV+ G+G+ + I+G +G+GK+T LRC+ + K C G ++V
Sbjct: 4 LQVEDIHKRYGSHEVLRGVSLRAGKGDVISIIGSSGSGKSTFLRCVNFLEKPCAGHIRVG 63
Query: 67 GKSIRDMNRLELAKLLAYVP---QRVEPGFLRVFDFVLLGRR----------PYMGLSPR 113
+ +R L +L A P QR+ VF L P L
Sbjct: 64 DEELRTRPGA-LGELRAADPRQLQRIRSRLAMVFQHFNLWSHLTVLENVVECPVNVLRMN 122
Query: 114 REDLEAVRR--ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLD 171
R+D A R K+ E+ E + LSGG+ Q+VAIARA+A E V+L DEPT+ LD
Sbjct: 123 RDDAVARARHYLAKVGLAEKVERQYPCELSGGQQQRVAIARALAMEPQVMLFDEPTSALD 182
Query: 172 PKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
P+ +V+++++ L EG+T++ V H++ A + +FL G + T D++
Sbjct: 183 PELVGEVLKVMQQLAEEGRTMVLVTHEMAFARQVSSHVIFLHQGVIEEEGTPDQV 237
>pir||D72415 zinc ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980616|gb|AAD35218.1|AE001698_7
(AE001698) zinc ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 240
Score = 109 bits (270), Expect = 3e-23
Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 22/205 (10%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDV 63
+K++EV NL + N +L+ V F V EGEF+ I+GPNGAGKTTL+R + G +K +G V
Sbjct: 1 MKIVEVKNLTYRINDFEILKNVTFSVEEGEFVGIIGPNGAGKTTLVRILVGDIKNYEGKV 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQ--RVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAV 120
+V GK + Y+PQ +V+ F + V +F +G M R+ D E V
Sbjct: 61 EVRGK-------------IGYLPQLHQVQREFPITVKEFAAMG----MYGRYRKIDWEKV 103
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R LK + + E+ +K LSGGE Q++++ARA+ + +++LDEP +D +
Sbjct: 104 RSTLKDVGILHKENDPIKNLSGGEFQRLSLARALLSDPDILVLDEPEAGVDEMGKASFYE 163
Query: 181 IIKDLIGEGK-TVITVMHDLTLALR 204
++ L E TVI V HD+ + +
Sbjct: 164 LLNRLRKEKNITVIMVSHDIGMVFK 188
>sp|Q58903|YF08_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1508
>gi|2127732|pir||C64488 ABC transporter probable
ATP-binding subunit homolog - Methanococcus jannaschii
>gi|1592142|gb|AAB99520.1| (U67591) ABC transporter,
probable ATP-binding subunit [Methanococcus jannaschii]
Length = 224
Score = 109 bits (269), Expect = 4e-23
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 5/205 (2%)
Query: 23 LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKVFGKSIRDMNRLELAKL 81
L+ +N + EGEF++I+GP+G GK+TLL +A + KG+V G+ M+ E A
Sbjct: 21 LKNINLKIEEGEFVMIMGPSGCGKSTLLNILALLDTPTKGEVYYKGRRTSSMSENERAIF 80
Query: 82 LAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMK--- 138
+ + F + L + R+ +RA KLL + DR+
Sbjct: 81 RRKISGFIFQQFHLIKTLTALENVELPMMLDERDKSYRRKRAKKLLEMVGLGDRLNHYPH 140
Query: 139 TLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITVMHD 198
LSGG+ Q+VAIARA+A +I DEPT NLD KS + VM I+K L +G T+I V H+
Sbjct: 141 QLSGGQQQRVAIARALANNPKIIFADEPTGNLDSKSGMAVMSILKGLNEKGITIIMVTHE 200
Query: 199 LTLALRFGEKFLFLKDGEVTGIMTR 223
L ++ K + L+DGE+ I+ +
Sbjct: 201 QELT-KYASKIIKLRDGEIVEIINK 224
>sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMX
>gi|7442505|pir||B69661 multiple sugar-binding transport
ATP-binding protein msmX - Bacillus subtilis
>gi|1783246|dbj|BAA11723.1| (D83026) highly homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636416|emb|CAB15907.1| (Z99123)
multiple sugar-binding transport ATP-binding protein
[Bacillus subtilis]
Length = 365
Score = 109 bits (269), Expect = 4e-23
Identities = 69/198 (34%), Positives = 110/198 (54%), Gaps = 5/198 (2%)
Query: 27 NFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKVFGKSIRDMNRLELAKLLAYV 85
N + + EF+V +GP+G GK+T LR +AG+ + KGD + GK + D+ + + +
Sbjct: 24 NLHIADKEFIVFVGPSGCGKSTTLRMVAGLEEISKGDFYIEGKRVNDVAPKDRDIAMVFQ 83
Query: 86 PQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGEL 145
+ P + V+D + G + + P+ E + V A K+L +EE+ R K LSGG+
Sbjct: 84 NYALYP-HMTVYDNIAFGLK--LRKMPKPEIKKRVEEAAKILGLEEYLHRKPKALSGGQR 140
Query: 146 QKVAIARAIAQETPVILLDEPTNNLDPKSQIDV-MRIIKDLIGEGKTVITVMHDLTLALR 204
Q+VA+ RAI ++ V L+DEP +NLD K ++ + IIK T I V HD T AL
Sbjct: 141 QRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQRLQTTTIYVTHDQTEALT 200
Query: 205 FGEKFLFLKDGEVTGIMT 222
+ + +KDG++ I T
Sbjct: 201 MATRIVVMKDGKIQQIGT 218
>sp|Q58418|PSTB_METJA PROBABLE PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB
>gi|2119775|pir||C64426 phosphate transport system
ATP-binding protein - Methanococcus jannaschii
>gi|1591672|gb|AAB99016.1| (U67544) phosphate specific
transport complex component (pstB) [Methanococcus
jannaschii]
Length = 252
Score = 108 bits (268), Expect = 6e-23
Identities = 74/226 (32%), Positives = 128/226 (55%), Gaps = 15/226 (6%)
Query: 4 KVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI------L 57
KVK+ E NL Y K L +N + E + ++GP+G GK+T LRC+ + +
Sbjct: 3 KVKM-ETKNLNLWYGEKQALFDINLPIYENKITALIGPSGCGKSTFLRCLNRLNDLIPNV 61
Query: 58 KCKGDVKVFGKSI--RDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRRE 115
+ +G+V + GK+I +D++ EL K + V Q+ P + ++D V G R + G+ ++E
Sbjct: 62 RIEGEVLLDGKNIYDKDVDVYELRKRVGMVFQKPNPFAMSIYDNVAFGPRIH-GIKDKKE 120
Query: 116 DLEAVRRALKLLRV-EEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNLD 171
+ V ALK + +E +D + K +LSGG+ Q++ IARAIA + V+L+DEPT+ LD
Sbjct: 121 LDKIVEWALKKAALWDEVKDELHKNALSLSGGQQQRLCIARAIAVKPEVLLMDEPTSALD 180
Query: 172 PKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
P S + + ++ +L + T++ V H++ A R + F G++
Sbjct: 181 PISTLKIEELMVEL-AKDYTIVVVTHNMQQASRVSDYTAFFLMGKL 225
>pir||C64666 glutamine transport protein glnQ - Helicobacter pylori (strain
26695) >gi|2314330|gb|AAD08217.1| (AE000623) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Helicobacter pylori 26695]
Length = 248
Score = 108 bits (268), Expect = 6e-23
Identities = 68/218 (31%), Positives = 121/218 (55%), Gaps = 11/218 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
++E L+ +Y VL G+NF + +GE VILGP+G GK+T L+C+ G+ K +G++
Sbjct: 4 ILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKINEGEILF 63
Query: 66 FGKSIRDM--NRLELAKLLAYVPQRVEP-GFLRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
++ + N ++ + + V Q E L V D +LL M + R +D E + +
Sbjct: 64 ENTNLNNKATNWNQMRQKIGMVFQNYELFPHLNVLDNILLAP---MKVQKRSKD-EVISQ 119
Query: 123 ALKLLR---VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
A++LL+ +E + K LSGG+ Q+VAI R++ ++L DE T +LDP+ +V+
Sbjct: 120 AIELLKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEVL 179
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+I +L G +++ V H++ A + K +F G++
Sbjct: 180 EVILELATTGMSMVIVTHEMKFAQKIAHKIVFFDSGKI 217
>emb|CAB97433.1| (AL389898) putative glycine betaine ABC transport system
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 394
Score = 108 bits (268), Expect = 6e-23
Identities = 73/212 (34%), Positives = 119/212 (55%), Gaps = 17/212 (8%)
Query: 26 VNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRLELAKLLAY 84
V+FDV +GE V++G +G+GK+TL+RC+ +++ G + + G+ +R M+R L +L +
Sbjct: 66 VSFDVRKGEVFVVMGLSGSGKSTLVRCLTRLIEPTAGSIVIDGEDVRAMDRSRLRELRRH 125
Query: 85 VPQRVEPGF-----LRVFDFVLLGRRPY-MGLSPRREDLEAVRRALKLLRVEEFEDRVMK 138
V F V D V G MG + RRE A+ + L E E R
Sbjct: 126 RAAMVFQHFGLLPHRTVLDNVAYGLEVQGMGRAERRERAAAIVAKVGL---EGLEQRRPG 182
Query: 139 TLSGGELQKVAIARAIAQETPVILLDEPTNNLDP----KSQIDVMRIIKDLIGEGKTVIT 194
LSGG+ Q+V +ARA+A + V+L DEP + LDP Q +V+R+ ++ EG+T++
Sbjct: 183 QLSGGQRQRVGLARALAVDPEVLLFDEPFSALDPLIRRDMQEEVVRLHRE---EGRTMVF 239
Query: 195 VMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ HDL AL+ G++ ++DG V + T +E+
Sbjct: 240 ITHDLQEALKLGDRIALMRDGRVVQLGTPEEI 271
>dbj|BAB06693.1| (AP001517) alkylphosphonate ABC tranporter (ATP-binding protein)
[Bacillus halodurans]
Length = 258
Score = 108 bits (268), Expect = 6e-23
Identities = 76/248 (30%), Positives = 132/248 (52%), Gaps = 15/248 (6%)
Query: 7 VIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
+IE N+ Y NG L+ VN + EGEF+VI+G +GAGK+TL+R + ++ +G++
Sbjct: 1 MIEFKNVSLVYPNGTQGLKDVNLKINEGEFVVIVGLSGAGKSTLIRSMNRLVTPTEGELL 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL----RVFDFVLLGRRPYMG-------LSPR 113
+ G++I + +L KL V + L V V+ GR ++G L P+
Sbjct: 61 IDGENILPYSSRQLRKLRTKVGMIFQNYNLVKRSSVMKNVISGRLGHVGTFASLLNLYPK 120
Query: 114 REDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
ED+ R+L+ + + E + LSGG+ Q+VAIAR + Q+ +IL DEP +LDP
Sbjct: 121 -EDVALAYRSLQRVNIAEKVYQRADQLSGGQQQRVAIARVLTQQPKIILADEPVASLDPP 179
Query: 174 SQIDVMRIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLS 232
+ VM ++ + E K T I +H + +A+ + ++ + ++ GEV ++ +
Sbjct: 180 TSHQVMTYLRKINKEDKITTIVNLHFIDMAMEYADRIIGMRAGEVVFDGPASDVSEETFE 239
Query: 233 ETYGISVK 240
E YG ++
Sbjct: 240 EIYGRKIR 247
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 108 bits (267), Expect = 7e-23
Identities = 70/227 (30%), Positives = 122/227 (52%), Gaps = 10/227 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+I++ L ++G+ V+ ++F + GE + +LGPNGAGK+T L+ ++G L G V++
Sbjct: 1 MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEP-GFLRVFDFV--LLGRRPYMGLSPRREDLEAVRR 122
FG ++D R + KL+ Y+P+ G + V F+ + R Y G RR +
Sbjct: 61 FGFDMQDKAR-QAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRR----IDS 115
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
A+ + + + +++TLS G ++VA+A+AI + ++LLDEPT+ LDP + V +++
Sbjct: 116 AMDCMELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLV 175
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
K+L E K V+ H L + L + G + T EL R
Sbjct: 176 KNL-SESKIVVISTHILEEVSFMCSRALVINGGRLLADNTPGELRTR 221
>dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding protein) [Bacillus
halodurans]
Length = 365
Score = 108 bits (267), Expect = 7e-23
Identities = 72/224 (32%), Positives = 121/224 (53%), Gaps = 6/224 (2%)
Query: 8 IEVSNLEFSYNGK-NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
I++ N+ Y+G + N D+ + EF+V +GP+G GK+T LR IAG+ KGD+ +
Sbjct: 4 IQLKNVYKIYDGDVQAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGDLLI 63
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALK 125
GK + D+ + + + + P + V+D + G + + + E + V+ A K
Sbjct: 64 GGKRMNDVAPKDRDIAMVFQNYALYP-HMNVYDNMAFGLK--LRKFKKDEIDKRVKNAAK 120
Query: 126 LLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL 185
+L +EE DR K +SGG+ Q+VA+ RAI ++ V L+DEP +NLD K ++ + I L
Sbjct: 121 ILGLEEMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKL 180
Query: 186 IGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
T I V HD T A+ + + +KDG + + + E+ D
Sbjct: 181 HQRLQTTTIYVTHDQTEAMTMATRIVIMKDGVIQQVGSPKEVYD 224
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 108 bits (267), Expect = 7e-23
Identities = 71/216 (32%), Positives = 113/216 (51%), Gaps = 13/216 (6%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
V+E+ + Y + +R ++ V EGE L +LGP+G GKTT LR +AG+ + G
Sbjct: 26 VLELDGVTKEYGAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGLERPTG----- 80
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFL----RVFDFVLLGRRPYMGLSPRREDLEAVR- 121
G D R+ R E G + +F + + GL+ R ED A R
Sbjct: 81 GTIELDAQRVAGPDTFVAAEDR-EIGIVFQDFALFPHLSVAENVAFGLTDRDEDATAARV 139
Query: 122 -RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
L L+ + E DR + LSGG+ Q+VA+AR++A E ++LLDEP +NLD + ++++
Sbjct: 140 DEMLALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLRVEMRE 199
Query: 181 IIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDG 215
++ ++ E G T ++V HD AL ++ L DG
Sbjct: 200 EVRRILKEAGVTAVSVTHDQEEALSISDRVAVLNDG 235
>sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|72464|pir||QRECGQ
glutamine transport protein glnQ - Escherichia coli
>gi|581098|emb|CAA32384.1| (X14180) GlnQ (AA 1-240); gtg
start [Escherichia coli] >gi|1651363|dbj|BAA35481.1|
(D90718) Glutamine transport protein GlnQ. [Escherichia
coli] >gi|1651369|dbj|BAA35491.1| (D90719) Glutamine
transport protein GlnQ. [Escherichia coli]
>gi|1787029|gb|AAC73896.1| (AE000183) ATP-binding
component of glutamine high-affinity transport system
[Escherichia coli K12]
Length = 240
Score = 108 bits (266), Expect = 9e-23
Identities = 68/217 (31%), Positives = 118/217 (54%), Gaps = 9/217 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+IE N+ + VL ++ ++ +GE +VI+GP+G+GK+TLLRCI + + GD+ V
Sbjct: 1 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-----LRVFDFVLLGRRPYMGLSPRREDLEAV 120
G + D E +L+ V F L + V+ G G + + E +
Sbjct: 61 DGLKVNDPKVDE--RLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGAN-KEEAEKLA 117
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R L + + E LSGG+ Q+VAIARA+A + ++L DEPT+ LDP+ + +V++
Sbjct: 118 RELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLK 177
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+++DL EG T++ V H++ A + + +F+ G +
Sbjct: 178 VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRI 214
>pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AAC07853.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 253
Score = 108 bits (266), Expect = 9e-23
Identities = 79/230 (34%), Positives = 126/230 (54%), Gaps = 11/230 (4%)
Query: 9 EVSNLEFSYN---GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
EV LE Y G+ +L+ VNF V +GE I+G +G+GKT++ + I G+ K KG V
Sbjct: 3 EVVRLEHIYKEIEGRVILKDVNFSVYKGEIFSIIGGSGSGKTSITKLIVGLWKPTKGKVL 62
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL----RVFDFVLLGRRPYMGLSPRREDLEAV 120
VF K++ +++ LEL +L + + G L RV++ V+ + G + E +
Sbjct: 63 VFRKNVPELSGLELDELRKNIGYVFQEGALFDSYRVWENVVFYYLEH-GKHNKEELRKMA 121
Query: 121 RRALKLLRVEE-FEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
LKL+ V+E D L GG ++VAIARAIA +I+ DEPT+ LDP + +
Sbjct: 122 LENLKLVNVDESVLDLYPSELFGGMRKRVAIARAIATRPQLIIYDEPTSGLDPITSRVID 181
Query: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
++I +L + G T + V HD+ A ++ + +K+GE+ I DE+ D
Sbjct: 182 KLILELRNKTGTTSLVVTHDMISAFTISDRVMVIKNGEIIAIGKPDEVID 231
>pir||D75308 sugar ABC transportor, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459951|gb|AAF11701.1|AE002049_6 (AE002049) sugar
ABC transportor, ATP-binding protein [Deinococcus
radiodurans]
Length = 455
Score = 108 bits (266), Expect = 9e-23
Identities = 66/213 (30%), Positives = 118/213 (54%), Gaps = 5/213 (2%)
Query: 18 NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGKSIRDMNRL 76
N ++ ++ N ++ + EF+V +GP+G GK+T LR IAG+ G +++ + + D+
Sbjct: 50 NKQHAVKDFNLEIADREFMVFVGPSGCGKSTTLRMIAGLEDISDGVLRIGDRVVNDVPPK 109
Query: 77 ELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRV 136
+ + + + P + V++ + G + + +PR E + VR A ++L++E R
Sbjct: 110 DRDIAMVFQNYALYP-HMNVYENMAFGLK--LRKTPREEIDKRVRDAARILQIEHLLGRK 166
Query: 137 MKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITV 195
K LSGG+ Q+VA+ RAI +E V L+DEP +NLD K ++++ I L G T+I V
Sbjct: 167 PKELSGGQRQRVAMGRAIVREPSVFLMDEPLSNLDAKLRVEMRSQISQLHRRLGATIIYV 226
Query: 196 MHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
HD A+ G + + ++DG + + T L D
Sbjct: 227 THDQVEAMTLGNRIVVMRDGVIMQVDTPMNLYD 259
>pir||F81363 probable glutamine transport ATP-binding protein Cj0902 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968340|emb|CAB73160.1| (AL139076) putative
glutamine transport ATP-binding protein [Campylobacter
jejuni]
Length = 242
Score = 108 bits (266), Expect = 9e-23
Identities = 69/219 (31%), Positives = 121/219 (54%), Gaps = 13/219 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKV 65
+IEV NL+ Y VL+ +N + +G+ + I+GP+G GK+T LRCI + L G++ +
Sbjct: 1 MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELADSGEILI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDL----EAVR 121
++I D +++ K + Q+V F F + L+P + + EA++
Sbjct: 61 NKQNILD-KEIDINK----IRQKVSMVFQHFNLFANKNVMENLCLTPIKTGILSQEEAIK 115
Query: 122 RALKLLR---VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
+A LL + + E+ + LSGG+ Q++AIAR++ VIL DEPT+ LDP+ +V
Sbjct: 116 KAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGEV 175
Query: 179 MRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ I+KD+ EG T++ V H++ A + F+ G++
Sbjct: 176 LSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKI 214
>pir||B72089 ABC transporter, ATP-binding protein CP0412 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
>gi|4376623|gb|AAD18492.1| (AE001619) rRNA methylase
[Chlamydophila pneumoniae CWL029]
>gi|7189336|gb|AAF38256.1| (AE002202) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978720|dbj|BAA98556.1| (AP002546) rRNA methylase
[Chlamydophila pneumoniae J138]
Length = 259
Score = 108 bits (266), Expect = 9e-23
Identities = 71/238 (29%), Positives = 124/238 (51%), Gaps = 11/238 (4%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGK 68
V NL +Y VL ++F +G+G ILGPNGAGK+TLL+ G++K G V F +
Sbjct: 11 VHNLCVNYEHAAVLYHISFSLGKGSLTAILGPNGAGKSTLLKASLGLIKPSSGTVYFFNQ 70
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPR--REDLEAVRRA 123
+ ++ + +AY+PQR + + V D L+G Y G+ R +D
Sbjct: 71 KFK-----KVRQRIAYMPQRASVDWDFPMTVLDLALMGCYSYKGMWGRISSDDRREAFHI 125
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + +E DR + LSGG+ Q+ +ARA+ Q+ + L+DE + +D S + +++
Sbjct: 126 LERVGLESVADRQIGQLSGGQQQRAFLARALMQKADLYLMDELFSAIDMASFKTSVGVLQ 185
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKV 241
+L +GKT++ V HDL+ + + + L + T + L + +TYG +++
Sbjct: 186 ELRDQGKTIVVVHHDLSHVRQLFDHVVLLNKRLICCGPTDECLNGDTIFQTYGCEIEL 243
>sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNC
>gi|7445925|pir||A65220 phosphonates transport
ATP-binding protein phnC - Escherichia coli (strain
K-12) >gi|216591|dbj|BAA14262.1| (D90227) ATP-binding
protein [Escherichia coli] >gi|536950|gb|AAA97005.1|
(U14003) HisP-like nucleotide binding protein
(ATP-binding protein) [Escherichia coli]
>gi|1790544|gb|AAC77067.1| (AE000482) ATP-binding
component of phosphonate transport [Escherichia coli
K12]
Length = 262
Score = 107 bits (265), Expect = 1e-22
Identities = 76/231 (32%), Positives = 129/231 (54%), Gaps = 23/231 (9%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL---KCKGD- 62
+I V L ++N L V+ ++ GE + +LGP+G+GK+TLLR ++G++ K G
Sbjct: 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSH 63
Query: 63 VKVFGKSIRDMNRL--ELAKLLA---YVPQRVE-PGFLRVFDFVLLGRRPYMGLSP---- 112
+++ G++++ RL ++ K A Y+ Q+ L V + VL+G +G +P
Sbjct: 64 IELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLENVLIGA---LGSTPFWRT 120
Query: 113 -----RREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPT 167
E + +AL + + F + + TLSGG+ Q+VAIARA+ Q+ VIL DEP
Sbjct: 121 CFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPI 180
Query: 168 NNLDPKSQIDVMRIIKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+LDP+S VM ++D+ +G TV+ +H + ALR+ E+ + L+ G V
Sbjct: 181 ASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHV 231
>pir||C48518 ABC-type transport protein (PEB1 5' region) - Campylobacter jejuni
>gi|388564|gb|AAA02918.1| (L13662) major cell-binding
factor receptor [Campylobacter jejuni]
Length = 242
Score = 107 bits (265), Expect = 1e-22
Identities = 71/219 (32%), Positives = 121/219 (54%), Gaps = 13/219 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
+IE+ N+ Y +VL+ N V EGE LVI+GP+G+GK+T +RC+ G+ + G+V V
Sbjct: 1 MIELKNVNKYYGTHHVLKIFNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query: 66 FGKSIRDMNRLELA-KLLAYVPQRVE--PGFLRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
+ N++E+ K A V Q P + + L + ++ EA
Sbjct: 61 NNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMK-----LQKKSKKEAEET 115
Query: 123 ALKLLRVEEFEDRVM---KTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
A K L+V D+ TLSGG+ Q+VAIAR++ + P IL DEPT+ LDP++ +V+
Sbjct: 116 AFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVL 175
Query: 180 RIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEV 217
++K++ + T++ V H++ A ++ +F++DG +
Sbjct: 176 DVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAI 214
>pir||G69633 glutamine transport protein glnQ - Bacillus subtilis
>gi|2635188|emb|CAB14684.1| (Z99117) glutamine ABC
transporter (ATP-binding protein) [Bacillus subtilis]
>gi|2635206|emb|CAB14701.1| (Z99118) glutamine ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 242
Score = 107 bits (265), Expect = 1e-22
Identities = 72/234 (30%), Positives = 126/234 (53%), Gaps = 15/234 (6%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+I N+ Y +VL+ +N + +GE +VI+GP+G+GK+TLLRCI + +G + V
Sbjct: 1 MITFQNVNKHYGDFHVLKQINLQIEKGEVVVIIGPSGSGKSTLLRCINRLESINEGVLTV 60
Query: 66 FGKSIRD----MNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
G +I D +N++ + + + P V ++L + SP + E R
Sbjct: 61 NGTAINDRKTDINQVRQNIGMVFQHFHLYP-HKTVLQNIMLAPVKVLRQSPEQAK-ETAR 118
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
L+ + + + D LSGG+ Q+VAIAR +A + V+L DEPT+ LDP+ +V+ +
Sbjct: 119 YYLEKVGIPDKADAYPSQLSGGQQQRVAIARGLAMKPEVMLFDEPTSALDPEMIGEVLDV 178
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY 235
+K L EG T++ V H++ A ++ +F+ +G++ LE+ V +E Y
Sbjct: 179 MKTLAKEGMTMVVVTHEMGFAKEVADRIVFIDEGKI--------LEEAVPAEFY 224
>pir||H70432 ABC transporter - Aquifex aeolicus >gi|2983897|gb|AAC07448.1|
(AE000744) ABC transporter [Aquifex aeolicus]
Length = 247
Score = 107 bits (265), Expect = 1e-22
Identities = 79/220 (35%), Positives = 125/220 (55%), Gaps = 13/220 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
++E + Y V +G++F V + + I+G +GAGKTTLLR I G+LK KG+V++
Sbjct: 2 IVEFEEVYSGYGNTVVHKGISFKVESSQIVAIVGGSGAGKTTLLRLILGLLKPLKGEVRL 61
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVF-DFVLLGRRPYMGLSPRREDLEAVRR-- 122
FGKSI++++ EL KL + + F +F +L Y + R+ D V
Sbjct: 62 FGKSIKNLSEEELQKLRDRMGVVFQ--FSALFGSMTVLENVMYPVIKKRKLDRSIVEMNA 119
Query: 123 ALKL----LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
KL L+ E+F + + LSGG +K A+ARA++ + +++LDEPT+ LDP S +
Sbjct: 120 CFKLSVCGLKPEDFY-KYPQELSGGMKKKTALARALSLDPELLILDEPTSGLDPISAEEF 178
Query: 179 MRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+IK + G TVI V HDL +LR +K L L++G++
Sbjct: 179 DNLIKTVRDTFGTTVIMVTHDLP-SLRICDKVLALREGKI 217
>gb|AAD09976.1| (AF055088) ATP-binding cassette; PsaB [Streptococcus pneumoniae]
Length = 240
Score = 107 bits (265), Expect = 1e-22
Identities = 71/235 (30%), Positives = 124/235 (52%), Gaps = 10/235 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
+I + NL SY L+ ++ + I+GPNGAGK+TLL+ + GI+ + +
Sbjct: 1 MIRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGIIPHQMQAFLD 60
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGL--SPRREDLEAVR 121
K ++ + +AYV Q++ + ++V + V LG P + L S + + + V+
Sbjct: 61 DKEVK-----KSLHRIAYVEQKINIDYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQ 115
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
AL+++ + ++ +R + LSGG+ Q+V IAR + QE ILLDEP +D S+ +M
Sbjct: 116 EALEIVGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEPFAGIDSVSEEIIMNT 175
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
++DL GKTV+ V HDL+ + ++ L + + T + + L E YG
Sbjct: 176 LRDLKKAGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTEETFTETNLKEAYG 230
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 107 bits (264), Expect = 2e-22
Identities = 82/241 (34%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKGDVKV 65
+IEV ++ S+ L ++F V EGE + I+G NGAGKTT +R IAGIL G V+V
Sbjct: 18 MIEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRV 77
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMG--LSPRREDLEAVRRA 123
G + + + L + ++ Y+P+ EP F L R Y G R+ L+ R
Sbjct: 78 GGHDVTE-DPLSVKSMIGYLPE--EPNLYERFRAGDLLR--YFGELYGVPRDVLD--DRI 130
Query: 124 LKLLRVEEFEDRVM---KTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+LL + DR M T S G Q++ IARA+ + P+I+ DEPT LDP + +
Sbjct: 131 AELLELVGMTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIRE 190
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
I+DL G KT+I H + A ++ + G + I T DEL+ ++ + + VK
Sbjct: 191 FIRDLKG-SKTMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELKSKIRGDLV-LEVK 248
Query: 241 V 241
V
Sbjct: 249 V 249
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 107 bits (264), Expect = 2e-22
Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+IE+ ++ SY +++ N + GEFL ILGP+G GKTT+LR +AG+ + G++ +
Sbjct: 10 IIELRSITKSYGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIIL 69
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALK 125
G+ I ++ + + + P + +F+ V G R M P E V AL+
Sbjct: 70 DGEDITNVPAEKRHVNTVFQSYALFP-HMTIFENVAFGLR--MQKVPEAEIKPRVLEALR 126
Query: 126 LLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDL 185
++++EE DR LSGG+ Q++AIARA+ + V+LLDE + LD K + + +K L
Sbjct: 127 MVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYELKVL 186
Query: 186 IGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ G T I V HD A+ ++ + L+ G++
Sbjct: 187 QRQLGITFIFVTHDQEEAITMSDRIVLLRKGKI 219
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 107 bits (264), Expect = 2e-22
Identities = 71/217 (32%), Positives = 128/217 (58%), Gaps = 11/217 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
V+++ +L + VLRG++ +V +GE + I+GP+G+GK+TLLRCI + + +G +
Sbjct: 3 VLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKIYF 62
Query: 66 FGKSI--RDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
G+ I R++NR+ + + + + P L V + + L M + ++D EAV +A
Sbjct: 63 KGELITHRNINRIRSSIGMVFQQFNLFP-HLSVLNNLTLAP---MKVKNMQKD-EAVEKA 117
Query: 124 LKLLRVEEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
KLL +++ + LSGG+ Q+VAIARA+ + ++L DEPT+ LDP+ +V+
Sbjct: 118 KKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLD 177
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+IKDL G T++ V H++ A ++ +F+ +G +
Sbjct: 178 VIKDLAQSGMTMLIVTHEMRFARDVSDRVVFMDEGRI 214
>pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyrococcus abyssi
(strain Orsay) >gi|5457805|emb|CAB49295.1| (AJ248284)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 280
Score = 107 bits (264), Expect = 2e-22
Identities = 79/258 (30%), Positives = 137/258 (52%), Gaps = 17/258 (6%)
Query: 5 VKVIEVSNLEFSYNGKNV--LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL----- 57
+ +IEV N+ F Y LR VN +V +GEFL I+GP+G+GK+T + G++
Sbjct: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
Query: 58 -KCKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYM--GLSPRR 114
+ +G+V V G + R+ + EL+ + V Q + ++F+ +L + L R
Sbjct: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDS---QLFNMTVLEEVAFALENLGVER 117
Query: 115 EDL-EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
E++ +R ALKL+++ + + LSGGE Q++AIA + + V++LDEPT+ LDP
Sbjct: 118 EEMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
Query: 174 SQIDVMRIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRV-L 231
+ +V+ +++ L E K T+I V H+ L ++ + G V +E+ + V
Sbjct: 178 GREEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEF 237
Query: 232 SETYGISVKV-AKLGREI 248
E GI + K+G E+
Sbjct: 238 LERIGIRIPTRVKIGYEL 255
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 106 bits (263), Expect = 2e-22
Identities = 76/230 (33%), Positives = 120/230 (52%), Gaps = 31/230 (13%)
Query: 5 VKVIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
+K+IE N+ ++Y +G L+G++F +GE + +LGPNGAGK+TL GIL+ G
Sbjct: 1 MKIIEAVNIRYTYPDGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTSGK 60
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRR 122
V V GK I D ++ L K V Q+V F D + +PR ++ A
Sbjct: 61 VLVDGKEI-DYSKSGLIK----VRQKVGIVFQNPDDQLF---------APRVDEDVAFGP 106
Query: 123 ALKLLRVEEFEDRVMKTL---------------SGGELQKVAIARAIAQETPVILLDEPT 167
L +E E+RV L SGGE ++VAIA +A + +++LDEPT
Sbjct: 107 LNMGLDEDEVEERVKDALRKVGMSGTRTDPHHLSGGEKKRVAIAGILAMKPDIMILDEPT 166
Query: 168 NNLDPKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+ LDP+ ++R++ +L EG T+I HD+ LA + ++ + GE+
Sbjct: 167 SGLDPRGASQILRLLHELNEEGMTIIISTHDVDLAPLYSDRIYIISGGEI 216
>gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein GLNQ [Salmonella
typhimurium]
Length = 240
Score = 106 bits (263), Expect = 2e-22
Identities = 67/217 (30%), Positives = 118/217 (53%), Gaps = 9/217 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKV 65
+IE N+ + VL ++ ++ +GE +VI+GP+G+GK+TLLRCI + + GD+ V
Sbjct: 1 MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGF-----LRVFDFVLLGRRPYMGLSPRREDLEAV 120
G + D E +L+ V F L + V+ G G+ + +A
Sbjct: 61 DGLKVNDPKVDE--RLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGVKKEEAEKQA- 117
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
+ L + + E LSGG+ Q+VAIARA+A + ++L DEPT+ LDP+ + +V++
Sbjct: 118 KALLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLK 177
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+++DL EG T++ V H++ A + + +F+ G +
Sbjct: 178 VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRI 214
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 106 bits (263), Expect = 2e-22
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 16/256 (6%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+I V NL + K VL+G+NF V +GE +LGPNG+GK+T +R ++GI+ +G V V
Sbjct: 1 MIIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQR------VEPGFLRVFDFVLLGRRPYMGLSPRREDLEA 119
G + + +++ +++ YVP+ + P F F+ RR P+ E
Sbjct: 61 AGVDV-SRDPMKVKEIVGYVPETPALYESLTPA--EFFSFIGGVRR-----IPQDILEER 112
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V+R + + ++ ++++ TLS G QK+++ A+ + V++LDE N LDPKS
Sbjct: 113 VKRLVDAFGIGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIFR 172
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY-GIS 238
++ + EGK+++ H L LA ++ + +G + T DEL + E I
Sbjct: 173 ELLFEFKEEGKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKLEDIF 232
Query: 239 VKVAKLGREIVPLVGA 254
+K+ + E+ +V A
Sbjct: 233 LKLTQAKEEVSQIVSA 248
>pir||F71561 probable rRNA methylase - Chlamydia trachomatis (serotype D, strain
UW3/Cx) >gi|3328462|gb|AAC67659.1| (AE001281) rRNA
methylase [Chlamydia trachomatis]
Length = 259
Score = 106 bits (263), Expect = 2e-22
Identities = 68/238 (28%), Positives = 124/238 (51%), Gaps = 11/238 (4%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGK 68
V +L +Y+ +VL + F + G I+GPNGAGK+TLL+ G+++ G FG+
Sbjct: 11 VEDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQ 70
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPR--REDLEAVRRA 123
++ +AY+PQR + + V D VL+G Y G+ R +D + R
Sbjct: 71 RFSKVHHR-----IAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWNRISTDDRQEAMRI 125
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + +E F +R + LSGG+ Q+ +AR++ Q+ + L+DE + +D S V+ +++
Sbjct: 126 LERVGLEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQ 185
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKV 241
+L EGKT++ + HDL+ + + + L V + L + + YG +++
Sbjct: 186 ELKSEGKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQAYGCELEL 243
>pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106014|gb|AAF83877.1|AE003943_8 (AE003943) sugar
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 364
Score = 106 bits (263), Expect = 2e-22
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 19/220 (8%)
Query: 18 NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRL 76
NG+ V+ GV+F+V +GE +V++GP+G GK+TLLR IAG+ G +++ + + D+
Sbjct: 15 NGQVVVPGVSFEVADGELMVLVGPSGCGKSTLLRMIAGLEDISSGTLRIGERVVNDVPPK 74
Query: 77 ELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALK----LLRVEEF 132
+ + + + P + GL R EA+ +K +L +
Sbjct: 75 DRNVAMVFQSYALYPHMTAAENLA-------FGLKLRGYSTEAIAERIKNVAEMLGLTSL 127
Query: 133 EDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK----SQIDVMRIIKDLIGE 188
D + K +SGG+ Q+VA+ RA+ +E+ V LLDEP +NLD K + D+ R+ + L
Sbjct: 128 LDTLPKAMSGGQRQRVALGRAMVRESAVFLLDEPLSNLDAKLRNSVRSDITRLHRKL--- 184
Query: 189 GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
G T+I V HD A+ G + + LKDG + I T L D
Sbjct: 185 GTTMIYVTHDQVEAMTLGHRIVLLKDGVIQQIDTPMVLYD 224
>pir||F83122 probable ATP-binding component of ABC transporter PA4192 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950402|gb|AAG07579.1|AE004835_8 (AE004835) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 247
Score = 106 bits (263), Expect = 2e-22
Identities = 74/231 (32%), Positives = 120/231 (51%), Gaps = 13/231 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGD-VKV 65
+I + + Y + L V+ VG GE +V+ GP+G+GK+TL+R + + +G + +
Sbjct: 1 MIRLEKVNKWYGAYHALADVDEQVGRGEVVVVCGPSGSGKSTLIRTLNRLEPIQGGRILI 60
Query: 66 FGKSIR----DMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
G+ I D+NR + + P L V D L GL P EA R
Sbjct: 61 DGQDIHAPGLDLNRFRSHIGFVFQQFNLFP-HLNVLDNCTLASLRLRGLKPA----EARR 115
Query: 122 RALKLLRVEEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
+A+ LL D+ LSGG+ Q+VAIARA+A E P++L DEPT+ LDP+ +V
Sbjct: 116 QAMALLERVGLADKAAAFPARLSGGQQQRVAIARALAMEPPLMLFDEPTSALDPEMVGEV 175
Query: 179 MRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
+ +++DL +G T++ V H++ A ++ LF+ G V + D+ +R
Sbjct: 176 LLVMRDLARDGMTMVVVTHEMGFAHDVADRVLFMDAGRVLERASPDDFFNR 226
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 106 bits (262), Expect = 3e-22
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 13/224 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+ IEV NL ++G+ VL G++ +V GE + I+GP+G+GKTTLLR I + + +
Sbjct: 1 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQ-RVEPGFL----------RVFDFVLLGRRPYMGLSPR 113
G D R L++ + + Q R GF+ V + ++ G G P+
Sbjct: 61 TVGDITIDTAR-SLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKG-EPK 118
Query: 114 REDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
E R L + + E + LSGG+ Q+VAIARA+A VIL DEPT+ LDP+
Sbjct: 119 EEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPE 178
Query: 174 SQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+V+ I+ L E +T++ V H+++ A ++ +F+ G +
Sbjct: 179 LVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRI 222
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 106 bits (262), Expect = 3e-22
Identities = 73/227 (32%), Positives = 127/227 (55%), Gaps = 11/227 (4%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
+ V +L K +L+G++F++ EGE ++GPNGAGKTT LR I+ ++K G V VF
Sbjct: 4 VVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVF 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVF---DFVLLGRRPYMGLSPRREDLEAVRRA 123
GK++ + E+ KL++Y+P+ E G R +++ Y S E++ V RA
Sbjct: 64 GKNVVEEPH-EVRKLISYLPE--EAGAYRNMQGIEYLRFVAGFYASSSSEIEEM--VERA 118
Query: 124 LKLLRV-EEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
++ + E+ +DRV T S G ++K+ IARA+ + +LDEPT+ LD + +V +I+
Sbjct: 119 TEIAGLGEKIKDRV-STYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKIL 177
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
K EG T++ H++ ++ + +G + T +EL++R
Sbjct: 178 KQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER 224
>pir||D82147 amino acid ABC transporter, ATP-binding protein VC1864 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9656394|gb|AAF95012.1| (AE004262) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 256
Score = 106 bits (262), Expect = 3e-22
Identities = 68/228 (29%), Positives = 121/228 (52%), Gaps = 16/228 (7%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCI-------AGIL 57
V +E+ NL ++ VL+G++ +G+ + I+G +G+GK+T LRCI AG +
Sbjct: 4 VPALEIKNLHKTFGQNEVLKGISLQAQKGDVISIIGSSGSGKSTFLRCINLLETPTAGEI 63
Query: 58 KCKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGF--------LRVFDFVLLGRRPYMG 109
KG++ + + + K + + R+ F + V + V+ +G
Sbjct: 64 WVKGELIQMKTTRQGTVQPAKEKQVQRIRSRLAMVFQSFNLWSHMTVLENVIEAPVHVLG 123
Query: 110 LSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNN 169
+ P+ + +E R L+ + + E +D LSGG+ Q+ AIARA+A E V+L DEPT+
Sbjct: 124 V-PKAQAIEQAERLLRKVGLYERKDYYPGHLSGGQQQRAAIARALAVEPEVMLFDEPTSA 182
Query: 170 LDPKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
LDP+ +V+ +++DL EG+T++ V H++ A +FL G+V
Sbjct: 183 LDPELVGEVLGVMRDLAEEGRTMLVVTHEMAFARDVSNHVMFLHQGKV 230
>sp|P40735|YBXA_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBXA
>gi|7445713|pir||E69751 ABC transporter (ATP-binding
protein) homolog ybxA - Bacillus subtilis
>gi|1644202|dbj|BAA10983.1| (D64126) unknown [Bacillus
subtilis] >gi|2632412|emb|CAB11921.1| (Z99104) alternate
gene name: ybaD~similar to ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 281
Score = 106 bits (261), Expect = 4e-22
Identities = 77/218 (35%), Positives = 123/218 (56%), Gaps = 10/218 (4%)
Query: 6 KVIEVSNLEFSYNG---KNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAG-ILKCKG 61
++I V ++ F Y + L GV+ V EGE+L I+G NG+GK+TL R + G IL G
Sbjct: 5 QLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESG 64
Query: 62 DVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRREDLEA 119
D++V G + + + E+ K + V Q + F V D V G G+ PR E +E
Sbjct: 65 DIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFFGTTVRDDVAFGLENN-GV-PREEMIER 122
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V A+K + +++F D+ LSGG+ Q+VAIA IA +I+LDE T+ LDP + +V+
Sbjct: 123 VDWAVKQVNMQDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVL 182
Query: 180 RIIKDLIGEG-KTVITVMHDLTLALRFGEKFLFLKDGE 216
++ L +G TVI++ HDL A + ++ + + G+
Sbjct: 183 ETVRHLKEQGMATVISITHDLNEAAK-ADRIIVMNGGK 219
>dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.]
Length = 363
Score = 106 bits (261), Expect = 4e-22
Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDV 63
V + + N+ Y+ V+ GV+ D+ GEF+V++GP+G GK+T LR +AG+ + G +
Sbjct: 2 VASVSIQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTI 61
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
++ G+ I D+ + + + + P L V D + G R + + + AV+ A
Sbjct: 62 RIDGRVINDLAPKDRDVAMVFQNYALYP-HLNVRDNISFGLR--LKRTKKSVIDAAVKTA 118
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
+L ++ +R LSGG+ Q+VA+ RAI ++ V L DEP +NLD K + + IK
Sbjct: 119 ADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRTQMRAEIK 178
Query: 184 DLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGI 220
L G TVI V HD A+ ++ + ++DG + I
Sbjct: 179 RLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQI 216
>gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus solfataricus]
Length = 225
Score = 105 bits (260), Expect = 5e-22
Identities = 78/229 (34%), Positives = 128/229 (55%), Gaps = 21/229 (9%)
Query: 5 VKVIEVSNLEFSYNGKN---VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK--C 59
+ VI + N+ Y G LR +N + EGEF+ ILGP+G+GK+TLL I GIL
Sbjct: 1 MSVIRLENVTKIYEGNVKTIALRDINLSIDEGEFISILGPSGSGKSTLLS-ILGILDRPS 59
Query: 60 KGDVKVFGKSIRDMNRLELAKL----LAYVPQRVEP----GFLRVFDFVLLGRRPYMGLS 111
+G V ++ + ++ E++K+ + +V Q L+ + L+ R G+
Sbjct: 60 QGKVYIYEVDVTKLSDNEISKIRNEYIGFVFQNFNLIQRLSVLQNVELPLVAR----GI- 114
Query: 112 PRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLD 171
P+++ E +LKL+ ++ ++ LSGG+ Q+VAIARA+AQ +IL DEPT NLD
Sbjct: 115 PKKKREEIAINSLKLVGLDGLINKKPSELSGGQQQRVAIARALAQNPKIILADEPTGNLD 174
Query: 172 PKSQIDVMRIIKDLIGEGKTVITVM-HDLTLALRFGEKFLFLKDGEVTG 219
+ VM I K + E KT I V+ HD +A + ++ ++++DG++ G
Sbjct: 175 SSNAKIVMNIFKKINEEFKTTIAVVTHDREVA-SYTKRKIYIRDGKIVG 222
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 105 bits (260), Expect = 5e-22
Identities = 68/232 (29%), Positives = 122/232 (52%), Gaps = 14/232 (6%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKV 65
+I V + Y L V+F V EGE L ILGPNGAGK+TL++ + KG+VK+
Sbjct: 1 MINVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRV----EPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
FGK I + ++ E+ + + YVP+++ E F+ G+ +++++
Sbjct: 61 FGKDIVEHSK-EILQQIGYVPEKLALYPELSVKEYLKFI----SEIKGVKKLKKEID--- 112
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
R + + +++E ED+++ LS G Q+V IA A+ +++LDEPTN LDP I+
Sbjct: 113 RVISIFKLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEF 172
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE 233
+++L E T++ H L+ ++ + + +G + T++ + L E
Sbjct: 173 LRELAKE-STILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLKE 223
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 105 bits (260), Expect = 5e-22
Identities = 77/240 (32%), Positives = 120/240 (49%), Gaps = 10/240 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
VIE NL Y +RGV F V EGE LGPNGAGKTT +R + G+LK G V+V
Sbjct: 7 VIEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVRV 66
Query: 66 FGKSI-RDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
G + R+ +L+ + + VP+ P D + MG E +R++
Sbjct: 67 LGYDMTREPEKLKARQRMGIVPEMANP----YIDLTAMQNLKLMGELYGLPKWEIEKRSI 122
Query: 125 KLLRV-EEFEDRVMKT--LSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
+LL++ E +E R +K S G Q++ +A A+ + + LDEPT+ LD S + I
Sbjct: 123 ELLKLFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDI 182
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKV 241
I+D GKT+ H++ A E+ ++ G++ I T + L+ R+ E + V +
Sbjct: 183 IRDEKKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLK-RLTKEHLSVEVSL 241
>gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Thermoanaerobacter
ethanolicus]
Length = 371
Score = 105 bits (260), Expect = 5e-22
Identities = 67/205 (32%), Positives = 114/205 (54%), Gaps = 5/205 (2%)
Query: 27 NFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRLELAKLLAYV 85
NF + + EF+V++GP+G GKTT LR IAG+ + KG++ + K + + + + +
Sbjct: 28 NFTIEDKEFVVLVGPSGCGKTTTLRMIAGLERQTKGNIYIGEKLVNYLPPKDRDIAMVFQ 87
Query: 86 PQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGEL 145
+ P + V++ + G R PR E + V+RA ++L + E DR + LSGG+
Sbjct: 88 DYALYP-HMTVYENLSFGLRNLK--VPRTEIEQKVKRAAEILGISELLDRKPRELSGGQR 144
Query: 146 QKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITVMHDLTLALR 204
Q+VA+ RAI + V L DEP +NLD K ++ + + +L + T++ V HD A+
Sbjct: 145 QRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRVELAELHKKLETTIVYVTHDQVEAMT 204
Query: 205 FGEKFLFLKDGEVTGIMTRDELEDR 229
G++ + + G + I T DEL +R
Sbjct: 205 LGQRIIVMNLGIIQQIATPDELYNR 229
>pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106344|gb|AAF84156.1|AE003966_17 (AE003966) sulfate
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 348
Score = 105 bits (260), Expect = 5e-22
Identities = 72/226 (31%), Positives = 117/226 (50%), Gaps = 5/226 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
I + L + L G++ D+ +GE L +LGP+G+GKTTLLR IAG+ +FG
Sbjct: 3 IRIQELCKQFEDFTALAGIDLDIRQGELLALLGPSGSGKTTLLRIIAGLEHADAGRVLFG 62
Query: 68 KSIRDMNRLELAKLLAYVPQRVEP-GFLRVFDFVLLGRRPYMGLS--PRREDLEAVRRAL 124
M ++ A+ + +V Q + V++ V G R G + P + V L
Sbjct: 63 DEDATMMSVQ-ARRVGFVFQHYALFKHMSVYENVAFGLRVRRGKARWPESQISARVFELL 121
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
L++++ E R LSGG+ Q+VA+ARA+A E V+LLDEP LD + + D+ R +++
Sbjct: 122 SLVQLDGLEQRYPMQLSGGQRQRVALARALAIEPRVLLLDEPFGALDAQVRRDLRRWLRE 181
Query: 185 LIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
+ G T + V HD AL ++ L G + + + E+ +R
Sbjct: 182 IHDRTGLTTVFVTHDQEEALELADRVAILNQGRIEQVASPAEVYNR 227
>sp|P54954|YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YXEO
>gi|7442525|pir||A70076 ABC-type transport protein yxeO
- Bacillus subtilis >gi|1408500|dbj|BAA08331.1| (D45912)
homologous to GlnQ glutamine transport ATP-binding
protein of Bacillus stearothermophilus, belonging to the
ATP-binding cassette (ABC) family [Bacillus subtilis]
>gi|2636494|emb|CAB15984.1| (Z99124) similar to amino
acid ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 249
Score = 105 bits (259), Expect = 6e-22
Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 18/239 (7%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCI-------AGILKC 59
+I V N+ ++ VL G++ +V GE + I+GP+G+GK+TLLRC+ G+++
Sbjct: 1 MITVKNIRKAFKDLVVLDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLNLLERPDQGLIEI 60
Query: 60 KGDVKVFGKSIRDMNRLELAKLLAYVPQRV-----EPGFLRVFDFVLLGRRPYMGLSPRR 114
G+ K+ + L + A V Q + + + +++ + PR
Sbjct: 61 -GEAKLNAEKFTRKEAHRLRQQTAMVFQNYNLFKNKTALQNITEALIVAQH-----KPRD 114
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
E LK + +E D T+SGG+ Q++ IARA+A ILLDEPT+ LDP+
Sbjct: 115 EAKRIGMEILKQVGLEHKADSYPITMSGGQQQRIGIARALAVNPHAILLDEPTSALDPEL 174
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE 233
V+++IK + + T+I V H++ A ++ +F+ DG + T +EL D +E
Sbjct: 175 VTGVLQVIKSIAEKQTTMIIVTHEMAFAKEVADQVIFMADGHIIEQGTPEELFDHPKNE 233
>gi|11499407 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445943|pir||B69477 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648727|gb|AAB89431.1| (AE000977) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 231
Score = 105 bits (259), Expect = 6e-22
Identities = 73/217 (33%), Positives = 121/217 (55%), Gaps = 16/217 (7%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
KV ++ +E S LRG+N ++ GEF+V+LGP+G GKTT+L I GI + +G V
Sbjct: 9 KVYQMGKVEVS-----ALRGINLEIERGEFMVVLGPSGCGKTTMLNIIGGIDRPTRGRVI 63
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL-RVFDFV--LLGRRPYMGLSPRREDLEAVR 121
GK I + N L + +R GF+ + F+ + L R + E V
Sbjct: 64 FDGKDITNYNEDRLT-----MHRRNNVGFIFQFFNLIPTLTARENVEIAADLVESPRDVD 118
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
LK++ + + + LSGGE Q+VAIARA+ + P+IL DEPT +LD ++ V+++
Sbjct: 119 EVLKMVGLADRAEHFPAELSGGEQQRVAIARALVKNPPIILADEPTGSLDFETGKAVLKV 178
Query: 182 IKDL-IGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++++ EG T + V H+ +A ++ ++L+DG+V
Sbjct: 179 MREINRKEGITFVLVTHNSAIA-AIADRVVYLRDGKV 214
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 105 bits (259), Expect = 6e-22
Identities = 77/229 (33%), Positives = 122/229 (52%), Gaps = 13/229 (5%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKVF 66
+E+ + SY+ VL +N + +GEF +LGP+G+GKTT++R IAG+ +G V++
Sbjct: 6 VELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVRIN 65
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
G+ + + + + P L VF+ V G R + P E + V R L+L
Sbjct: 66 GEDCTSLPPYRRNVGMVFQNLALFP-HLNVFENVAYGLR--LRKIPEGEIKDRVYRYLEL 122
Query: 127 LRV--EEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ----IDVMR 180
+ + E + R ++ LSGG+ Q+VAIARA+ E ++LLDEP LD K + ++ R
Sbjct: 123 VNLDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHMISELKR 182
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
I K L G T I V HD + AL ++ L +G + I T E+ +R
Sbjct: 183 IQKTL---GTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYER 228
>gb|AAC35949.1| (AF077010) ABC transporter ATPase TroB [Chlamydia trachomatis]
Length = 286
Score = 105 bits (259), Expect = 6e-22
Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 11/233 (4%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGK 68
V +L +Y+ +VL + F + G I+GPNGAGK+TLL+ G+++ G FG+
Sbjct: 36 VEDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQ 95
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPR--REDLEAVRRA 123
+ +AY+PQR + + V D VL+G Y G+ R +D + R
Sbjct: 96 RFSKAHHR-----IAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWNRISTDDRQEAMRI 150
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + +E F +R + LSGG+ Q+ +AR++ Q+ + L+DE + +D S V+ +++
Sbjct: 151 LERVGLEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQ 210
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
+L EGKT++ + HDL+ + + + L V + L + + YG
Sbjct: 211 ELKSEGKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQAYG 263
>pir||H82224 probable vitamin B12 ABC transporter, ATP-binding protein BtuD
VC1245 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9655727|gb|AAF94404.1| (AE004203) vitamin
B12 ABC transporter, ATP-binding protein BtuD, putative
[Vibrio cholerae]
Length = 251
Score = 105 bits (259), Expect = 6e-22
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 10/228 (4%)
Query: 26 VNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFGKSIRDMNRLELAKLLAYV 85
++ GE ++GPNG GK+TLL +AG++ G V+V G + + ELA+ AY+
Sbjct: 16 LSLQANAGEVWHVIGPNGCGKSTLLAALAGMIPFSGSVQVDGLDVSQASLSELARHRAYL 75
Query: 86 PQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGE 144
Q +P F L VF ++ L + L E + + +LL +++ R + LSGGE
Sbjct: 76 AQNNKPSFQLHVFQYLALSVPANVALE-CSEVASEIDQISRLLNIDDKLHRSIHQLSGGE 134
Query: 145 LQKVAIARAIAQETPV-------ILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITVMH 197
Q+V +A + Q +PV ++ DEP LD + + R+I+ + G+G TVI H
Sbjct: 135 WQRVRLAGSCLQVSPVLNPSARLLIWDEPAAPLDIAQESLLYRLIERMAGQGLTVIMANH 194
Query: 198 DLTLALRFGEKFLFLKDGEV-TGIMTRDELEDRVLSETYGISVKVAKL 244
DL LR ++ L L G + ++ L VL +G S++ +L
Sbjct: 195 DLNRTLRHADQVLLLSRGVLYRAGSAKEVLTQEVLQSVFGTSIRRVEL 242
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 105 bits (259), Expect = 6e-22
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 3/215 (1%)
Query: 18 NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKVFGKSIRDMNRL 76
+G L+ V+ D+ + EF +LGP+G GKTTLLR IAG +G++ ++G++I
Sbjct: 26 SGPVALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPF 85
Query: 77 ELAKLLAYVPQRVEPGFLRVFDFVL-LGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDR 135
E + + P + L RP + E E VR L L+++E F DR
Sbjct: 86 ERPVNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADR 145
Query: 136 VMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVIT 194
LSGG+ Q+VA+ARA+A + V+LLDEP + LD K + + +K + + G T I
Sbjct: 146 RPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKTGITFIF 205
Query: 195 VMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
V HD AL ++ L +G+V + +E+ +R
Sbjct: 206 VTHDQEEALTMSDRIAVLSEGQVQQVGPPEEIYER 240
>gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stutzeri]
Length = 341
Score = 104 bits (258), Expect = 8e-22
Identities = 73/250 (29%), Positives = 133/250 (53%), Gaps = 18/250 (7%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KG 61
+K +++ N+ SY K VL ++F+V G + +LG +GAGK+TL RC+ G+ G
Sbjct: 1 MKDVALQLKNVGKSYGNKVVLESIDFEVRHGSMVALLGTSGAGKSTLFRCLTGLEPIDSG 60
Query: 62 DVKVFGKSIRDMNRLELAKL---LAYVPQRVEPGFLRVFDFV--LLGRRPYMGLSPRRED 116
+ G+SI +++ L + + +V Q++ ++ F + +LG R + R
Sbjct: 61 SIVALGESIHELSPARLRAVRGQIGFVFQQLH--LVKRFSALENVLGAR-LAEMPIWRVT 117
Query: 117 LEAVRRALKLLRVE--------EFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTN 168
L++ RA K+L E ++ + + LSGG+ Q++AIARA+AQ+ +I+ DEP +
Sbjct: 118 LKSFSRADKVLAFECLDRVGMLDYANTPTQLLSGGQQQRIAIARALAQKPKIIIADEPVS 177
Query: 169 NLDPKSQIDVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELE 227
+LDP + V++ +K + V+ +H + LA FG++ + ++DG V T E
Sbjct: 178 SLDPLTARSVLQTLKAAATDLNVAVLCSLHQVDLAREFGDRIVGMRDGRVVFDGTPAEFT 237
Query: 228 DRVLSETYGI 237
D + Y +
Sbjct: 238 DERVHALYQV 247
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 104 bits (258), Expect = 8e-22
Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KG 61
+KV+ I EF LR ++FDV EGE +ILGP+G+GKT LL IAGI+ +G
Sbjct: 2 LKVESISKDYREFK------LREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRG 55
Query: 62 DVKVFGKSIRDMNRLELAKLLAYVPQRVEP-GFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
+ + G+ I + + + +Y+PQ + VFD + G + + PR+E V
Sbjct: 56 RILLRGEDITGLPPEK--RNFSYIPQNYALFPHMTVFDNIAFGLK--LRKIPRKEVARKV 111
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R + L ++ R +TLSGGE Q+VAIARA+ + ++L+DEP NLD +++ ++R
Sbjct: 112 REVAESLGIDHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIR 171
Query: 181 IIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+K E G T I V H AL G++ GIM R L
Sbjct: 172 EMKRWRKEFGFTAIHVTHSFEEALSLGDR---------VGIMLRGRL 209
>pir||A72401 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980721|gb|AAD35314.1|AE001707_1 (AE001707)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 266
Score = 104 bits (258), Expect = 8e-22
Identities = 74/236 (31%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 3 VKVKVIEVSNLEFSYNG----KNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK 58
++++V+ VS++ + G K L V+ + EGE L++ G G+GK+TLL+ +AG+++
Sbjct: 1 MRIEVVNVSHI--FHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIE 58
Query: 59 -CKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRRE 115
GDV G+ + E+ + + Q E F RVFD V + + P R+
Sbjct: 59 PTSGDVLYDGERKKGY---EIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFY---PDRD 112
Query: 116 DLEAVRRALKL--LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
+ V++A++ L + F+DRV LSGGE ++VAIA I E +++LDEP LD +
Sbjct: 113 PVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDRE 172
Query: 174 SQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
+ D++RI++ GKTVI + HD+ + ++ + L+ G+ TR E ++
Sbjct: 173 GKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEK 228
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 104 bits (258), Expect = 8e-22
Identities = 69/226 (30%), Positives = 118/226 (51%), Gaps = 5/226 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKVF 66
I + N+ S+ L +N + GE + +LGP+G+GKT+LLR IAG+ +GD+
Sbjct: 3 IVIQNVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFH 62
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRR--PYMGLSPRREDLEAVRRAL 124
+ + + + P + V D + G R P ++E E VR L
Sbjct: 63 KDKVTQTHAASRQVGFVFQHYALFP-HMTVADNISYGLRVKPRKERPSKKEIAEKVRELL 121
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
L+++E +DR LSGG+ Q++A+ARA+A E V+LLDEP LD K + D+ + ++
Sbjct: 122 ALVKLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRKWLRK 181
Query: 185 LIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
L E + T + V HD AL ++ + + G++ + + DE+ ++
Sbjct: 182 LHNEFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEVYEQ 227
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 104 bits (257), Expect = 1e-21
Identities = 71/224 (31%), Positives = 115/224 (50%), Gaps = 5/224 (2%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
+ + N+ Y V+ ++F + +GEF+V++GP+G GK+TLLR +AG+ + G + G
Sbjct: 20 VTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGLEEISGGDLLMG 79
Query: 68 KS-IRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
I D E + + + P + +G + PR E E V +A +
Sbjct: 80 ADVINDRPAKERDMAIVFQNYALYPHMTVAEN---MGFALKLRKRPRAEIDERVDKAAAI 136
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLI 186
L + + DR + LSGG+ Q+VA+ RAI ++ V L DEP +NLD K ++ + IK L
Sbjct: 137 LGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEIKALH 196
Query: 187 GEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
K T + V HD A+ +K + + +G V + T EL DR
Sbjct: 197 QRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDR 240
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 104 bits (257), Expect = 1e-21
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 34/241 (14%)
Query: 4 KVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGD 62
+++ + + N+ Y +R +N V GE L ++GP+G+GKTT LR I +++ +G
Sbjct: 5 RIEDVVLENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGR 64
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYM------GLSPRRED 116
V + G+ I +++ + L + + YV Q++ G P+M GL P+ E
Sbjct: 65 VLINGQDISEIDAVRLRRNIGYVIQQI-------------GLFPHMKVWENIGLIPKLEG 111
Query: 117 LEA------VRRALKLLRVE-EFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNN 169
E V LKL+ + EF +R LSGG+ Q+V +ARA+A P++L+DEP
Sbjct: 112 WEEEKIRQRVDELLKLVDLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGA 171
Query: 170 LDP----KSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE 225
LDP + Q + RI ++L GKT++ V HD+ A R G++ + +G + + +E
Sbjct: 172 LDPILRKQLQEEFARIKEEL---GKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEE 228
Query: 226 L 226
L
Sbjct: 229 L 229
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 104 bits (257), Expect = 1e-21
Identities = 72/227 (31%), Positives = 117/227 (50%), Gaps = 11/227 (4%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKVF 66
I + ++ + L V+ ++ +GE +LGP+G GKTT LR IAG +G V +
Sbjct: 4 IRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRVYIG 63
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKL 126
+ + + E + + + P +RVFD + G + + PR E + VR A +L
Sbjct: 64 SRDVTMLKPYERNTAMVFQNYALWP-HMRVFDNIAYGLK--LRKLPRSEIVRRVRWAAEL 120
Query: 127 LRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDP----KSQIDVMRII 182
L ++ DR LSGG+ Q+VA+ARAI E V+L+DEP +NLD K + +++R+
Sbjct: 121 LEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMREEIVRLQ 180
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDR 229
K L G T++ V HD AL + + G V + T E+ ++
Sbjct: 181 KRL---GVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEVYEK 224
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 104 bits (257), Expect = 1e-21
Identities = 74/258 (28%), Positives = 137/258 (52%), Gaps = 20/258 (7%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+I V NL + GK VL+G++F V +GE +LGPNG+GK+T +R ++GI+ +G V V
Sbjct: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQR------VEPGFLRVFDFVLLGRRPYMGLSPRREDL-- 117
G + + L++ +++ YVP+ + P F FV G+ +D+
Sbjct: 61 GGVEVAK-DPLQVKRIVGYVPETPALYESLTPA--EFFSFV-------GGVRGIPKDILE 110
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
E VR+ ++ ++++ ++++ TLS G QK+++ ++ + V++LDE N LDPKS
Sbjct: 111 ERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARI 170
Query: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY-G 236
++ + EGK+++ H L LA ++ + G + T +EL++ E
Sbjct: 171 FRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLED 230
Query: 237 ISVKVAKLGREIVPLVGA 254
+ +K+ + EI +V A
Sbjct: 231 VFLKLTQAKEEIAQVVSA 248
>emb|CAB60178.1| (AL132824) probable ABC sugar transport ATP binding protein
[Streptomyces coelicolor]
Length = 263
Score = 104 bits (256), Expect = 1e-21
Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 4 KVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGD- 62
+ ++E+S + +Y L GV+ +V GE +LG NGAGK+TL++ IAG+ + G
Sbjct: 7 RTALVELSGVSKNYGNVRALEGVSLEVHAGEITCVLGDNGAGKSTLIKIIAGLHQHDGGT 66
Query: 63 VKVFGKSIR---DMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSP-RREDLE 118
+ + G+ R L+ Y V P + V+ LG P G++P +R D++
Sbjct: 67 LSLDGEETRLSSPREALDRGIATVYQDLAVVP-LMPVWRNFFLGSEPRKGVAPFKRMDVD 125
Query: 119 AVRRAL--KLLRVE---EFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
+RR +LLR+ D+ + TLSGGE Q VAIARA+ V++LDEPT L K
Sbjct: 126 HMRRTTHAELLRMGIDLRDVDQPIGTLSGGERQCVAIARAVYFGAKVLVLDEPTAALGVK 185
Query: 174 SQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
V++ + +G V+ + H+ A G++F+ LK G + TRDE+
Sbjct: 186 QSGVVLKYVAAARDQGLGVVLITHNPHHAYLVGDRFVLLKRGTMVANQTRDEV 238
>gb|AAG20909.1| (AE005157) ABC transporter, ATP-binding protein; ZurA
[Halobacterium sp. NRC-1]
Length = 258
Score = 104 bits (256), Expect = 1e-21
Identities = 67/239 (28%), Positives = 122/239 (51%), Gaps = 8/239 (3%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVKVF 66
IE++++ F Y V+ ++ V GE++ ++GPNG+GK+TL++ + G+L+ +G ++F
Sbjct: 19 IELADVAFGYTATPVVEDISLAVSPGEYIGVVGPNGSGKSTLMKLMLGLLRPDRGRARLF 78
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSP-RREDLEAVRR 122
G ++ + + YV Q + V + V +GR P++G +D V
Sbjct: 79 GVPA---HQFDTGSRIGYVAQHASASKEMPITVREVVKMGRFPHVGFGQLSADDWAVVDE 135
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
AL + + F DR + LSGG+ Q+ IARA+A E +++ DEPT +D +S ++
Sbjct: 136 ALDTVGMSAFADRRVTELSGGQRQRAFIARALAGEAELLVFDEPTVGVDIESVAAFYDLL 195
Query: 183 KDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKV 241
L +G TV+ + HDL E+ + L T + ++ L+ +G + V
Sbjct: 196 DVLHDDGITVVLIEHDLGAVTEHAERVICLNRELHFDGPTAEFVDSDALARAFGTTTAV 254
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 103 bits (255), Expect = 2e-21
Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 17/245 (6%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+ ++E+SNL + ++G+ +V GE L +LGPNG+GKTT +R I G++ +G+++
Sbjct: 1 MNILEISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMVPYEGEIR 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
+ S+ M + L V + LR F + G+ ED V L
Sbjct: 61 NYATSVGWMPQNSPLYLNLSVEEN-----LRFFASLY-------GI----EDERRVEEML 104
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
KL+++E + R++K LSGG Q+ +A A+ + +++LDEPT +DP ++ +
Sbjct: 105 KLVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEK 164
Query: 185 LIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKVAKL 244
L EGKT++ H + A R E+ + +++G T +E++ R + + V A
Sbjct: 165 LREEGKTILVTTHYMDEAERC-ERLVLIRNGSKIAEGTPEEIKRRACGDRLLLEVDDALA 223
Query: 245 GREIV 249
I+
Sbjct: 224 ASRIL 228
>sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0412
>gi|2129162|pir||D64351 nitrate transport ATP-binding
protein - Methanococcus jannaschii
>gi|1591118|gb|AAB98401.1| (U67493) nitrate transporter
protein (nrtC) homolog (cmpC) [Methanococcus jannaschii]
Length = 267
Score = 103 bits (254), Expect = 2e-21
Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNV--LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-L 57
MKVK+KV ++ + F +NG V L +N +V E EFL ++GP+G GKTTLLR IAG+
Sbjct: 13 MKVKLKVENLTKI-FEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDY 71
Query: 58 KCKGDVKVFGKSIRD--MNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRRE 115
+G V + GK ++ +R + + +P R V V G G+ P+ E
Sbjct: 72 PTEGKVLLDGKEVKGPGADRGVVFQQYTLMPWRT------VLKNVTFGLE-LKGI-PKNE 123
Query: 116 DLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ 175
+E ++ +K++ +E FED LSGG Q+VAIAR +A + ++L+DEP LD +++
Sbjct: 124 RIEIAKKFIKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTR 183
Query: 176 -IDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFL--KDGEVTGIMTRD 224
I ++K E KTV V H + A+ ++ + L + G + I+ D
Sbjct: 184 NILQNELLKIWQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEIVKID 235
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 103 bits (254), Expect = 2e-21
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 5/225 (2%)
Query: 18 NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKGDVKVFGKSIRDMNRL 76
NG L+G++ DV EG+F +LGPNGAGK+T + ++ ++ K G V VFG + D +
Sbjct: 16 NGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSVFGHDL-DKDPA 74
Query: 77 ELAKLLAYVPQRVEPG-FLRVFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDR 135
L + L VPQ F +VFD V+ + Y G+ P + E R L L + + +
Sbjct: 75 GLKRCLGVVPQEFNFNQFEKVFDIVVT-QAGYYGI-PAKIAKERAERYLTQLGLWDKRNE 132
Query: 136 VMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITV 195
+ LSGG +++ IARA+ + +++LDEPT +D + + + + +L EG ++I
Sbjct: 133 ASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELNQEGISIILT 192
Query: 196 MHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
H L A + + GE+ + +L + SET+ + +K
Sbjct: 193 THYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLLDLK 237
>sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
(ORF1) >gi|97388|pir||A37761 hypothetical protein 1
(ntrA 5' region) - Thiobacillus ferrooxidans
>gi|154643|gb|AAA27378.1| (M58480) 5' end potential;
putative [Acidithiobacillus ferrooxidans]
Length = 241
Score = 102 bits (253), Expect = 3e-21
Identities = 76/235 (32%), Positives = 124/235 (52%), Gaps = 8/235 (3%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDVK 64
++++ +L SY + V+R V+ V GE + +LGPNGAGKTT + G+++ +G +
Sbjct: 3 ELLQAQSLFKSYRRRVVVRDVSVQVATGEVVGLLGPNGAGKTTTFYMMVGLVRPDRGHIF 62
Query: 65 VFGKSIRDMNRLELAKL-LAYVPQRVEPGFLRVFDFV--LLGRRPYMGLSPRREDLEAVR 121
+ + I + E A++ L Y+PQ EP R +L + LSP E E
Sbjct: 63 LQQRDITALPMHERARMGLGYLPQ--EPSVFRQMSAADNVLAVLETLPLSPV-ERQERQE 119
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
+ L L + D +LSGGE ++V IARA+A ILLDEP +DP S +++ R+
Sbjct: 120 QLLSELHLHALRDTKGHSLSGGERRRVEIARALAMSPRFILLDEPFAGIDPISVLEIQRL 179
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV-TGIMTRDELEDRVLSETY 235
I+DL G V+ H++ L E+ L DG+V T ++ ++D ++ + Y
Sbjct: 180 IRDLRARGIGVLITDHNVRETLGICERAYILHDGKVLTAGSPQEIVDDPMVRQVY 234
>pir||T35147 glutamate uptake system ATP-binding protein - Streptomyces
coelicolor >gi|2687342|emb|CAA15883.1| (AL020958)
glutamate uptake system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 258
Score = 102 bits (253), Expect = 3e-21
Identities = 68/225 (30%), Positives = 121/225 (53%), Gaps = 7/225 (3%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVK 64
+++ + ++ + +VL+ ++ + GE +V++GP+G+GK+TL R I + G +
Sbjct: 16 ELVVLKSVNKHFGALHVLQDIDLTIQRGEVVVVIGPSGSGKSTLCRTINRLETVDDGSIT 75
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL----RVFDFVLLGRRPYMGLSPRREDLEAV 120
+ GK + + ELA+L A V + L V + V LG+ + ++ + E
Sbjct: 76 IDGKPLPAEGK-ELARLRADVGMVFQSFNLFAHKTVLENVTLGQVKVRKVDAKKAE-EKA 133
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R L + V D+ LSGG+ Q+VAIARA+A + V+L DEPT+ LDP+ +V+
Sbjct: 134 RALLDRVGVGAQADKYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPEMINEVLE 193
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE 225
++K L +G T+I V H++ A + +F+ DG + T D+
Sbjct: 194 VMKQLAEDGMTMIVVTHEMGFARSAANRVVFMADGRIVEEATPDQ 238
>pir||E72757 probable phosphate transport ATP-binding protein pstB APE0050 -
Aeropyrum pernix (strain K1) >gi|5103438|dbj|BAA78959.1|
(AP000058) 253aa long hypothetical phosphate transport
ATP-binding protein pstB [Aeropyrum pernix]
Length = 253
Score = 102 bits (253), Expect = 3e-21
Identities = 71/228 (31%), Positives = 127/228 (55%), Gaps = 14/228 (6%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL----- 57
+K+ + VS L K++L+G++F G I+GP+G+GK+TL+R I ++
Sbjct: 1 MKLMDVRVSGLNVWITDKHILKGISFKAQPGTVTAIMGPSGSGKSTLIRVINRLIDLIPG 60
Query: 58 -KCKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEP-GFLRVFDFVLLGRRPYMGLSPRRE 115
+ +G+V + ++ + + + V Q P + +++ V +G + + GL+ ++
Sbjct: 61 ARVEGEVWINNMNVMKEDPYNIRRYTGMVFQEPNPFPHMTIYENVAIGPKLH-GLAKNKK 119
Query: 116 DL-EAVRRALKLLRV-EEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNL 170
+L E V ALK+ + +E +DR+ LSGG+ Q++++ARA+A + V+LLDEPT N+
Sbjct: 120 ELDEIVEWALKMAHLWDEVKDRLSDYPHQLSGGQRQRLSLARALALKPRVLLLDEPTANI 179
Query: 171 DPKSQIDV-MRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
DP S + + I++ E TVI V H A R ++ LFL +G V
Sbjct: 180 DPVSTVKIEQSIVEYAKEEMATVIIVTHTPQQAARISDQILFLYEGRV 227
>pir||E75564 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457722|gb|AAF09652.1|AE001869_1
(AE001869) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 328
Score = 102 bits (253), Expect = 3e-21
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK 60
M + + L ++ + V+ +V GE L +LGP+G GK+T+LR +AG+ +
Sbjct: 1 MTAAAPALSLRGLSKAFGAVQAVGDVSLEVQAGETLALLGPSGCGKSTVLRSVAGLERPD 60
Query: 61 -GDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEA 119
G V V G+ + + L + + P L V D V G P S R + +
Sbjct: 61 AGQVLVGGRDVTALPPEARHLGLVFQDYALFP-HLSVLDNVAYG--PRRRGSSRPDAAQQ 117
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
R AL L+ + E E R+ LSGG+ Q+VA+ARA+A +P++LLDEP +NLD K + ++
Sbjct: 118 AREALALVGLSEHERRLPAQLSGGQQQRVALARALATRSPLLLLDEPLSNLDEKLRSELR 177
Query: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEV 217
++ L G+ G V+ V HD AL + ++ G V
Sbjct: 178 HDLRGLFGQLGAGVLLVTHDQREALALAHRVAVMRAGHV 216
>dbj|BAB04159.1| (AP001508) transport system protein [Bacillus halodurans]
Length = 257
Score = 102 bits (253), Expect = 3e-21
Identities = 82/257 (31%), Positives = 134/257 (51%), Gaps = 16/257 (6%)
Query: 7 VIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVK 64
+IE+ N+ Y NG L +N + +GEF+ I+G +GAGK+TLLR + ++ GD+
Sbjct: 1 MIELKNVSKVYPNGVIGLDNINLTIEKGEFVAIVGLSGAGKSTLLRAMNRLIDISDGDIM 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFL----RVFDFVLLGR-------RPYMGLSPR 113
+ +SI + EL + + + L V VL GR R L P+
Sbjct: 61 INRRSITSASGKELRMMRRDIGMIFQNFNLVKRSTVLRNVLSGRVAHNHTFRTLFNLFPQ 120
Query: 114 REDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
+ D++ ++L+ + + E LSGG+ Q+V+IARA+AQE +IL DEPT +LDP
Sbjct: 121 K-DVDLALQSLERVNILEKAYTRSSQLSGGQQQRVSIARALAQEAKMILADEPTASLDPV 179
Query: 174 SQIDVMRIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLS 232
+ VM +K + E + TV+ +H + LA + + + L+DG+V D V
Sbjct: 180 TTKQVMDDLKKINTEDQVTVVINLHFVDLAREYATRIIGLRDGKVVFDGPAQRATDEVFK 239
Query: 233 ETYGISVKVAK-LGREI 248
+ YG +K + LG+E+
Sbjct: 240 DIYGRPLKEDELLGKEV 256
>pir||H69746 ABC transporter (binding protein) homolog ybdA - Bacillus subtilis
>gi|2632481|emb|CAB11989.1| (Z99105) similar to ABC
transporter (binding protein) [Bacillus subtilis]
>gi|3599617|dbj|BAA33092.1| (AB006424) ybdA [Bacillus
subtilis]
Length = 239
Score = 102 bits (252), Expect = 4e-21
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 11/217 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDV 63
+++++V NL Y + + ++F + GE + +LGPNGAGKTT +RC+ G+ K KGD+
Sbjct: 1 MQLMQVQNLSKCYRNGDGVEHLSFSIQRGEIVALLGPNGAGKTTTIRCLTGLYKPDKGDI 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQR--VEPGFLRVFDFVLLGRRPYMGLSPRREDL-EAV 120
+ G D+N + K +A +P + + P R G P ++D+ E V
Sbjct: 61 LIEGSPPGDIN---VQKKVALIPDQPYLYPALTAAEHIQFRAR----GYHPGKKDVKERV 113
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
ALK + +EE +++ LS G+ Q+V +A AI Q+ + +LDEPT LD S+ +
Sbjct: 114 YHALKEVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPTVGLDIPSKQWLSN 173
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
+K +G + H L + ++ + ++DG++
Sbjct: 174 WLKTKTDQGCSAFVSTHSLEFVIETADRVILIRDGKL 210
>sp|P75186|PSTB_MYCPN PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB HOMOLOG
>gi|2146494|pir||S73559 phosphate transport ATP-binding
protein pstB - Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673900|gb|AAB95881.1| (AE000023) phosphate specific
[Mycoplasma pneumoniae]
Length = 329
Score = 102 bits (251), Expect = 5e-21
Identities = 71/227 (31%), Positives = 121/227 (53%), Gaps = 15/227 (6%)
Query: 4 KVKVIEVSNLEFSYN-GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI------ 56
K V E+ NL F YN K VL +N + + ++G +G GK+T +RC+ +
Sbjct: 79 KKNVFEIENLNFWYNKDKQVLFDINLKIKRNKITALIGKSGCGKSTFIRCLNKLNDLNEN 138
Query: 57 LKCKGDVKVFGKSIRD--MNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRR 114
++ G + GK+I +N L L + V Q++ P +F+ + G R + G+ ++
Sbjct: 139 VRWNGKIFFLGKNINSGIINDLTLRTRVGMVFQQLTPFNFSIFENIAYGLRAH-GIHNKQ 197
Query: 115 EDLEAVRRALKLLRV-EEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNL 170
E V +ALK + +E +D + + TLSGG+ Q++ IARAIA + V+L+DEPT+ L
Sbjct: 198 AIHEIVEQALKSTALWDEVKDNLHRNANTLSGGQQQRLCIARAIALQPDVLLMDEPTSAL 257
Query: 171 DPKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
D + + +I+ L E T+I V H + +R ++ +F +G V
Sbjct: 258 DSIATNSIELLIQQL-KEKYTIIIVTHSMAQTIRITDETIFFANGRV 303
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 102 bits (251), Expect = 5e-21
Identities = 67/232 (28%), Positives = 120/232 (50%), Gaps = 3/232 (1%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKG 61
V V + VSNLE Y LRGV+F + EGE ++GPNGAGK+T L+ +A +L G
Sbjct: 2 VLVTAVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGG 61
Query: 62 DVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
+VFG + E+ KL++Y+P+ + R+ L + R+ + ++
Sbjct: 62 RAEVFGHDV-VKEASEVRKLISYLPEEA-GAYKRLTGLEYLEFMAKLYAKDSRKAEKMLK 119
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
++L + E + + T S G ++++ +ARA+ + + +LDEPT+ LD + ++ R
Sbjct: 120 LGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRT 179
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE 233
IK+ EG T + H++ ++ + G + + T EL++R +E
Sbjct: 180 IKEFSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAE 231
>gb|AAF73593.1| (AE002339) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 236
Score = 102 bits (251), Expect = 5e-21
Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 16/239 (6%)
Query: 6 KVIEVSNLEFSYN--GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDV 63
K + + N+ F Y G ++ V+ +V G+F+ I+GPNG GKTTL + + G+L+
Sbjct: 3 KQLILENVSFRYGKTGPWIVDHVSCEVHSGDFIGIIGPNGGGKTTLTQLMLGLLQ----- 57
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGR---RPYMGLSPRREDL 117
V GK + + +VPQ + F + V + VL GR P+ G ++ D
Sbjct: 58 PVCGKIFTCFTQENRPLSIGWVPQHFAYDAAFPITVKETVLSGRLATLPWYGRYTKK-DH 116
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
+A AL + + E++D LSGG++Q+V +ARA++ +LLDEPT N+DP +Q
Sbjct: 117 DAAEEALHTVDLLEYKDSCFSHLSGGQIQRVLLARALSARPKFLLLDEPTANIDPSNQQK 176
Query: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
+++I+ DL + T++ + HDL + F+ + ++T + + +R T+G
Sbjct: 177 ILQILSDL-NKHCTILMITHDLHHTAGCFNRVFFM-NKKLTALADTTTISERFCCNTFG 233
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 102 bits (251), Expect = 5e-21
Identities = 72/244 (29%), Positives = 118/244 (47%), Gaps = 22/244 (9%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+I V LE Y G + GV+FDVG GE ++GPNGAGKT+ L+ + G+++ GD+ V
Sbjct: 1 MISVQRLEKRYGGVTAVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAGDITV 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQR-------VEPGFLRVF-DFVLLGRRPYMGLSPRREDL 117
G D + + L ++P+ +LR F D + R + E +
Sbjct: 61 NGFDAGDT---AMRRTLGFLPEESPLYDEMTPRSYLRFFADLYDVDR------ATANERI 111
Query: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
EA L L + DR + S G +KVAIAR++ + V++ DEP + LDP +
Sbjct: 112 EAALDRLDL----DARDRPVGDFSKGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNT 167
Query: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGI 237
V+ ++L +GKT++ HDL ++ ++DG+ T ++ D +Y +
Sbjct: 168 VIEFTRELAADGKTIVFSAHDLHHVESVCDRVAIMRDGQFAATGTLADIRDEHGEVSYRV 227
Query: 238 SVKV 241
V
Sbjct: 228 FTDV 231
>gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport system ATP-binding;
UgpC [Halobacterium sp. NRC-1]
Length = 379
Score = 102 bits (251), Expect = 5e-21
Identities = 70/226 (30%), Positives = 113/226 (49%), Gaps = 4/226 (1%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDV 63
+ I +++L Y+ + G++ DV + EFLV++GP+G GK+T LR IAG+ G +
Sbjct: 1 MSTITLTDLTKHYDSIAAVDGIDLDVLDEEFLVVVGPSGCGKSTTLRLIAGLEDATAGTI 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
++ G + D + + + + P + + + G + S + + V A
Sbjct: 61 RIGGTDVTDSPPEDRDIAMVFQNYALYP-HMTAAENMTFGMQSVTDYSSAEIE-DRVADA 118
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L + E DR LSGGE Q+VAI RA+ +E V LLDEP +NLD K ++ + +
Sbjct: 119 AATLGITELLDRTPDALSGGERQRVAIGRALVREPSVFLLDEPLSNLDAKLRVHMRAELS 178
Query: 184 DLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELED 228
L E T + V HD T A+ G++ L DG V + +L D
Sbjct: 179 KLHRELDTTTVYVTHDQTEAMTLGDRVAVLNDGTVQQVAPPQQLYD 224
>pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AAC07884.1|
(AE000776) ABC transporter [Aquifex aeolicus]
Length = 251
Score = 101 bits (250), Expect = 7e-21
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 13/226 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKT----TLLRCIAGILKCK 60
+ ++EV NL Y K VL V+F+V GE L I+G +G+GK+ T+LR + +
Sbjct: 1 MSLLEVKNLNLWYREKQVLFDVSFEVKIGEILCIVGESGSGKSSILFTILRLLPPYARVS 60
Query: 61 GDVKVFGKSIRDMNRLELAKLLAYVPQRV--EPGFLRVFDFVLLGRRPYMGLSP----RR 114
G VK G+ + ++ E+ + V EP F + + LS RR
Sbjct: 61 GSVKFLGRELLKLSEREMKSIRGKEVGMVFQEPSLYLDPLFTVGSQIEETYLSHFKAGRR 120
Query: 115 EDLEAVRRALKLLRVEEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNLD 171
E EA +A+K + + E++ LSGG Q+V IA AI E ++L DEPT LD
Sbjct: 121 EAYEACIKAMKKAGIPKPEEKYRMYPHQLSGGLKQRVCIANAIVCEPKLVLADEPTTALD 180
Query: 172 PKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
Q ++ + +++ EGK VI + HD + G++ + LKDG+V
Sbjct: 181 VSVQRRILALFRNMKEEGKAVILITHDFGVVAEVGDRVIVLKDGKV 226
>pir||G71192 probable cobalt transport ATP-binding protein - Pyrococcus
horikoshii >gi|3258251|dbj|BAA30934.1| (AP000007) 284aa
long hypothetical cobalt transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 284
Score = 101 bits (250), Expect = 7e-21
Identities = 78/258 (30%), Positives = 134/258 (51%), Gaps = 17/258 (6%)
Query: 5 VKVIEVSNLEFSYNGKNV--LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL----- 57
+ VIEV ++ F Y LR +N ++ +GEFL I+GP+G+GK+T + G++
Sbjct: 1 MNVIEVEDVSFRYGNSREYSLRHINLEIRKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIA 60
Query: 58 -KCKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYM--GLSPRR 114
+ G+V V G + R+ + EL+ + V Q + ++F+ +L + L R
Sbjct: 61 GEFHGNVIVDGLNTREHSVSELSTKVGLVFQNPDS---QLFNMTVLEEVAFALENLGIER 117
Query: 115 EDL-EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
+++ +R ALKL+R+ + + LSGGE Q++AIA + + V++LDEPT+ LDP
Sbjct: 118 DEMWRRIRWALKLVRLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPL 177
Query: 174 SQIDVMRIIKDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGE-VTGIMTRDELEDRVL 231
+ +V+ +IK L E K T+I V H+ L ++ + G V D E+
Sbjct: 178 GREEVLGLIKLLNKEEKITIILVEHNTDFLLEHADRIVVFDKGRIVLEGKPEDVFENVEF 237
Query: 232 SETYGISVKV-AKLGREI 248
T G+ + K+G E+
Sbjct: 238 LRTIGVKLPTRVKIGYEL 255
>sp|P46920|OPAA_BACSU GLYCINE BETAINE TRANSPORT ATP-BINDING PROTEIN OPUAA
>gi|2119776|pir||I40535 probable glycine betaine/proline
ABC transporter - Bacillus subtilis
>gi|984803|gb|AAC43455.1| (U17292) ATPase [Bacillus
subtilis]
Length = 418
Score = 101 bits (249), Expect = 9e-21
Identities = 78/251 (31%), Positives = 133/251 (52%), Gaps = 28/251 (11%)
Query: 3 VKVKVIEVSNL---------EFSYNGKN---VLR------GVN---FDVGEGEFLVILGP 41
+K+KV +VS + + NGK +L+ GVN F+V +GE VI+G
Sbjct: 8 IKIKVEKVSKIFGKQTKKAVQMLANGKTKKEILKATGSTVGVNQADFEVYDGEIFVIMGL 67
Query: 42 NGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFV 100
+G+GK+TL+R + +++ G++ + G I +M++ +L ++ V F
Sbjct: 68 SGSGKSTLVRMLNRLIEPTAGNIYIDGDMITNMSKDQLREVRRKKISMVFQKFALFPHRT 127
Query: 101 LLGRRPYMGLS----PRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQ 156
+L Y GL ++E + +LKL+ +E FE + LSGG Q+V +ARA+
Sbjct: 128 ILENTEY-GLELQGVDKQERQQKALESLKLVGLEGFEHQYPDQLSGGMQQRVGLARALTN 186
Query: 157 ETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDG 215
+ ++L+DE + LDP + D+ + DL GKT+I + HDL ALR G++ + +KDG
Sbjct: 187 DPDILLMDEAFSALDPLIRKDMQDELLDLHDNVGKTIIFITHDLDEALRIGDRIVLMKDG 246
Query: 216 EVTGIMTRDEL 226
+ I T +E+
Sbjct: 247 NIVQIGTPEEI 257
>dbj|BAA08932.1| (D50453) glycine betain/L-proline transport ATPase [Bacillus
subtilis] >gi|2632584|emb|CAB12092.1| (Z99105) glycine
betaine ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 418
Score = 101 bits (249), Expect = 9e-21
Identities = 78/251 (31%), Positives = 133/251 (52%), Gaps = 28/251 (11%)
Query: 3 VKVKVIEVSNL---------EFSYNGK---NVLR------GVN---FDVGEGEFLVILGP 41
+K+KV +VS + + NGK +L+ GVN F+V +GE VI+G
Sbjct: 8 IKIKVEKVSKIFGKQTKKAVQMLANGKAKKEILKATGSTVGVNQADFEVYDGEIFVIMGL 67
Query: 42 NGAGKTTLLRCIAGILK-CKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFV 100
+G+GK+TL+R + +++ G++ + G I +M++ +L ++ V F
Sbjct: 68 SGSGKSTLVRMLNRLIEPTAGNIYIDGDMITNMSKDQLREVRRKKISMVFQKFALFPHRT 127
Query: 101 LLGRRPYMGLS----PRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQ 156
+L Y GL ++E + +LKL+ +E FE + LSGG Q+V +ARA+
Sbjct: 128 ILENTEY-GLELQGVDKQERQQKALESLKLVGLEGFEHQYPDQLSGGMQQRVGLARALTN 186
Query: 157 ETPVILLDEPTNNLDPKSQIDVMRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDG 215
+ ++L+DE + LDP + D+ + DL GKT+I + HDL ALR G++ + +KDG
Sbjct: 187 DPDILLMDEAFSALDPLIRKDMQDELLDLHDNVGKTIIFITHDLDEALRIGDRIVLMKDG 246
Query: 216 EVTGIMTRDEL 226
+ I T +E+
Sbjct: 247 NIVQIGTPEEI 257
>pir||G81714 ABC transporter, ATP-binding protein TC0339 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190381|gb|AAF39202.1|
(AE002301) ABC transporter, ATP-binding protein
[Chlamydia muridarum]
Length = 259
Score = 101 bits (248), Expect = 1e-20
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 11/238 (4%)
Query: 10 VSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVFGK 68
V +L +Y+ +VL + F + G I+GPNGAGK+TLL+ G+++ G FG+
Sbjct: 11 VDDLCVNYDHSDVLCHIAFSLPSGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQ 70
Query: 69 SIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPRRE--DLEAVRRA 123
+++ +AY+PQR + + V D VL+G Y G+ R D
Sbjct: 71 KFAKVHQR-----IAYMPQRASVDWDFPMTVLDLVLMGCYGYKGMWNRISTGDRREAMNI 125
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + + +F +R + LSGG+ Q+ +AR++ Q+ + L+DE + +D S V+ +++
Sbjct: 126 LERVGLADFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYRMVVDVLQ 185
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVKV 241
DL EGKT++ + HDL+ + + + L V L + + YG +++
Sbjct: 186 DLKKEGKTIVVIHHDLSNVRQLFDHVILLNKHLVCSGSVEKCLTKEAIFQAYGCELEL 243
>gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]
Length = 336
Score = 100 bits (247), Expect = 2e-20
Identities = 64/224 (28%), Positives = 119/224 (52%), Gaps = 7/224 (3%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDV 63
+ V+ +++L ++ VL+ ++ V + E + +LG +G GKTTLL+ IAG+L + GD+
Sbjct: 1 MSVLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTTLLKAIAGLLPIEQGDI 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
+ G+ ++ E L + + P L V D + G + P+ + +
Sbjct: 61 HLAGECLKSKAVEERQIGLIFQDYALFP-HLTVADNIQFG----LSKLPKVQQKAITEKM 115
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L ++ ++ FE R LSGG+ Q+VAIARA+A + ++LLDEP +N+D +++ +++ IK
Sbjct: 116 LSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFSNIDSQTRYAMIQEIK 175
Query: 184 DLI-GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
++ + I V H A F +K + G++ +EL
Sbjct: 176 QILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNEL 219
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 100 bits (246), Expect = 2e-20
Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
+ NL +Y G+ V+ V+ V GE + +LGPNGAGKTT + GI+ + G
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPAR-----CG 58
Query: 68 KSIRDMNRLELAKL-------LAYVPQRVEP-GFLRVFDFVLLGRRPYMGLSPRREDLEA 119
I D + + L L + Y+PQ L V+D + M + R+DL A
Sbjct: 59 NIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNL-------MAVLQIRDDLSA 111
Query: 120 VRRA------LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
+R ++ +E D + ++LSGGE ++V IARA+A ILLDEP +DP
Sbjct: 112 EQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPI 171
Query: 174 SQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLS 232
S ID+ RII+ L G V+ H++ L E+ + G + T E L+D +
Sbjct: 172 SVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVK 231
Query: 233 ETY 235
Y
Sbjct: 232 RVY 234
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 100 bits (246), Expect = 2e-20
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
Query: 4 KVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
KV+ I V NL Y +RG++F V GE LGPNGAGKTT + + +LK G
Sbjct: 3 KVEAIIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGR 62
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGRRPYMGLSPRREDLEA 119
V G + +R E+ K + V Q +P L ++ + + R Y GL + E +
Sbjct: 63 AIVAGHDVVKESR-EVRKKIGVVFQ--DPSVDRELTAWENMYIHGRIY-GLKGQ-ELKKK 117
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
+ LK + + EF+DR +K SGG +++ IARA+ E V+ LDEPT LDP+++ +
Sbjct: 118 IEELLKFVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIW 177
Query: 180 RIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRV 230
IK + E T+ H + A + ++ + G++ T +EL+ V
Sbjct: 178 EYIKTMKEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKKLV 229
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 100 bits (246), Expect = 2e-20
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 14/243 (5%)
Query: 5 VKVIEVSNLEFSYNGK-----------NVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCI 53
+ VIEV NL Y K L+G+ F V +GE +LGPNGAGKTT ++ +
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 54 AGILK-CKGDVKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSP 112
+L+ G+ KV G + R E+ K + V + + R+ + L + P
Sbjct: 61 TTLLEPSSGEAKVLGLDVVKDAR-EIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIP 119
Query: 113 RREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDP 172
RRE + + LK++ + + + ++ S G Q++AIA+A+ + V+ LDEPT LD
Sbjct: 120 RREAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
Query: 173 KSQIDVMRIIKDLIG-EGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVL 231
+S + V +++ L+ EGKTV+ H + A ++ + G++ + T + L+ V
Sbjct: 180 QSAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVR 239
Query: 232 SET 234
++T
Sbjct: 240 NDT 242
>pir||G72750 probable ABC transporter ATP-binding protein APE0532 - Aeropyrum
pernix (strain K1) >gi|5104183|dbj|BAA79499.1|
(AP000059) 264aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 264
Score = 100 bits (246), Expect = 2e-20
Identities = 80/239 (33%), Positives = 123/239 (50%), Gaps = 15/239 (6%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
+ V +L +YNG+ VL GVN + + I+GPNGAGKTT L+ I G++K +G +VF
Sbjct: 20 VRVEDLTVAYNGEPVLSGVNLEFRGPGLVQIIGPNGAGKTTFLKAILGLIKPARG--RVF 77
Query: 67 GKSIRDMNRLEL-AKLLAYVPQ-----RVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
R E+ + YVPQ ++ P +R F L R G++ RE V
Sbjct: 78 LDGFEATGRPEMVGRYAGYVPQNPSAPKLSPMTVREFVETSLRLR---GVTRARERAVEV 134
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
L +R E E R+ + LS G LQ+V IARAIA + ++++DEP ++DP ++++ R
Sbjct: 135 LHTLG-IRGEVLESRLWE-LSMGMLQRVFIARAIAPDPKMLVMDEPLASVDPAGRMEIAR 192
Query: 181 IIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
II L E + V+ HD +L L + + + + + + VL YG SV
Sbjct: 193 IIAGLARE-RLVLMTSHDPSLLLGHTDIIVVINRDLIASGPPEEVYREDVLRRVYGESV 250
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 100 bits (246), Expect = 2e-20
Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 11/233 (4%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKVF 66
+++ N+ + ++ ++ ++ +GEFLV+LGP+G GKTT LR IAG+ + G + +
Sbjct: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
Query: 67 GKSIRDMNR------LELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
K + D + E + + + P + V+D + + + P++E V
Sbjct: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYP-HMTVYDNIAFPLK--LRKVPKQEIDRRV 120
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
R ++L + E R + LSGG+ Q+VA+ RAI + V L+DEP +NLD K ++ +
Sbjct: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
Query: 181 IIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLS 232
+K L + G T I V HD A+ G++ + GE+ + T DE+ ++ L+
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLN 233
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 100 bits (246), Expect = 2e-20
Identities = 74/236 (31%), Positives = 121/236 (50%), Gaps = 17/236 (7%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDVKVF 66
IE+ N+ ++N L +N D+ GE + +LGP+G GKTTLLR IAG+ G++
Sbjct: 3 IEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFH 62
Query: 67 GK-----SIRDMNRLELAKLLAYVPQRVEP-GFLRVFDFVLLG-RRPYMGLSPRREDLEA 119
G+ +RD N + +V Q + VFD V G R G P ++A
Sbjct: 63 GEDVSQHDVRDRN-------VGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAIKA 115
Query: 120 -VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
V L +++++ DR + LSGG+ Q++A+ARA+A E ++LLDEP LD K + ++
Sbjct: 116 KVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKEL 175
Query: 179 MRIIKDLIGE-GKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSE 233
R + L E T + V HD A+ ++ + + G + I + E+ + S+
Sbjct: 176 RRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASD 231
>pir||B70327 ABC transporter - Aquifex aeolicus >gi|2982983|gb|AAC06596.1|
(AE000682) ABC transporter [Aquifex aeolicus]
Length = 224
Score = 99.8 bits (245), Expect = 3e-20
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKV 65
+++ N++ G +L+G++ V +GEF+ I+G +G+GK+TLL I G+L + KV
Sbjct: 3 EILRAENIKKVIRGYEILKGISLSVKKGEFVSIIGASGSGKSTLLY-ILGLLDAPTEGKV 61
Query: 66 F--GKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGL--------SPRRE 115
F GK + N EL+ L + + GF+ F +++ + P++E
Sbjct: 62 FLEGKEVDYTNEKELSLL-----RNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKE 116
Query: 116 DLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ 175
E L L + + R LSGGE Q+VAIARA+A E ++ DEPT NLD +
Sbjct: 117 AKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANT 176
Query: 176 IDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTR 223
VM I + G +++ V H+ LA + L +KDG+V G +TR
Sbjct: 177 KRVMDIFLKINEGGTSIVMVTHERELA-ELTHRTLEMKDGKVVGEITR 223
>pir||T46754 AdcC protein [imported] - Streptococcus pneumoniae
>gi|3758893|emb|CAA96186.1| (Z71552) AdcC protein
[Streptococcus pneumoniae]
Length = 234
Score = 99.8 bits (245), Expect = 3e-20
Identities = 66/201 (32%), Positives = 106/201 (51%), Gaps = 11/201 (5%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
++ I V +L F Y+ + VL +N+ V GEF+ + G NGA KTTL++ GIL+ +
Sbjct: 1 MRYITVEDLSFYYDKEPVLEHINYCVDSGEFVTLTGENGAAKTTLIKASLGILQPRIGKV 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRV---EPGF-LRVFDFVLLGRRPYMGLSPR--REDLE 118
K+ +L +AY+PQ++ GF V++FV GR P G R D E
Sbjct: 61 AISKTNTQGKKLR----IAYLPQQIASFNAGFPSTVYEFVKSGRYPRKGWFRRLNAHDEE 116
Query: 119 AVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
++ +L + + E D+ + +LSGG+ Q+ IAR A + V +LDEPT +D S+ +
Sbjct: 117 HIKASLDSVGMWEHRDKRLGSLSGGQKQRAVIARMFASDPDVFILDEPTTGMDAGSKNEF 176
Query: 179 MRII-KDLIGEGKTVITVMHD 198
++ GK V+ + HD
Sbjct: 177 YELMHHSAHHHGKAVLMITHD 197
>gb|AAF81672.1|AF232688_1 (AF232688) SloA [Streptococcus mutans]
Length = 240
Score = 99.8 bits (245), Expect = 3e-20
Identities = 63/236 (26%), Positives = 123/236 (51%), Gaps = 14/236 (5%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVF 66
++++ NL SY L V+ ++ I+GPNGAGK+TL + + ++ +G +
Sbjct: 1 MLKIENLSVSYRDHLALENVSLEIPSSTITGIIGPNGAGKSTLFKGVLNMVDHEGTSFID 60
Query: 67 GKSIRDMNRLELAKLLAYVPQRVEPGF---LRVFDFVLLGR----RPYMGLSPRREDLEA 119
GK + R ++YV Q+ + + ++V + V LG +P+ L +++D +
Sbjct: 61 GKILSQNLRS-----ISYVEQKADIDYNFPIKVKECVSLGLFSKVKPFSNL--KKQDWQC 113
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V+ AL + + ++ +R + LSGG+ Q++ +AR + Q+ I LDEP +D S+ ++
Sbjct: 114 VQEALSQVDLADYANRQISQLSGGQFQRMLLARCLVQDADYIFLDEPFVGIDIISEELIV 173
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY 235
+++ L EGKT++ + HDL+ + + L L + T + L++TY
Sbjct: 174 GLLQKLKKEGKTILIIHHDLSKVKTYFDHVLLLNKKVLAFGQTETVFTQKNLTKTY 229
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 99.8 bits (245), Expect = 3e-20
Identities = 71/235 (30%), Positives = 120/235 (50%), Gaps = 6/235 (2%)
Query: 8 IEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKGDVKV 65
+E+ L +Y G L+G++ V +G+F +LGPNGAGK+T + I+ ++ K G V V
Sbjct: 4 LEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVTV 63
Query: 66 FGKSIRDMNRLELAKL-LAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
FG + ++LELAK L VPQ + ++L + Y G+ P+ E ++ L
Sbjct: 64 FGYDLD--SQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGV-PKALAKERAKKYL 120
Query: 125 KLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKD 184
L + E + LSGG +++ IARA+ E +++LDEPT +D + + + +K
Sbjct: 121 TQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQ 180
Query: 185 LIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
+ +G T+I H L A ++ GE+ T L ++ ET+ + V
Sbjct: 181 INAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDV 235
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 99.5 bits (244), Expect = 4e-20
Identities = 77/257 (29%), Positives = 125/257 (47%), Gaps = 15/257 (5%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDV-K 64
+ IE S L YNG + G++ +V G ILGPNGAGK+T +R +A +L+ G +
Sbjct: 7 RAIETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTAR 66
Query: 65 VFGKSIR---DMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVR 121
VFG + D R ++ Y V+ G + V++GR + RE
Sbjct: 67 VFGHDVTSEPDTVRRRISVTGQYAS--VDEGLTGTENLVMMGRLQGYSWARARE------ 118
Query: 122 RALKLLR---VEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
RA +L+ + + DR++KT SGG +++ IA +I ++ LDEPT LDP+S+ V
Sbjct: 119 RAAELIDGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQV 178
Query: 179 MRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGIS 238
I++ L+ G TV+ L A + ++ + G V T EL+ + S +
Sbjct: 179 WDIVRALVDAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKSSLGSNVLRLR 238
Query: 239 VKVAKLGREIVPLVGAD 255
+ A+ E L+ A+
Sbjct: 239 LHDAQSRAEAERLLSAE 255
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 99.5 bits (244), Expect = 4e-20
Identities = 64/225 (28%), Positives = 119/225 (52%), Gaps = 8/225 (3%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+KVIE + Y L+ ++ V +GE +VI GP+G+GK+TL+R + G+
Sbjct: 1 MKVIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEI 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRAL 124
+ + + R + + + P L V + + L + LS + EA RA
Sbjct: 61 IVLPELDERTRRSGKIGMVFQHFNLFP-HLTVLENLTLAPIRTLKLSAQ----EAKERAY 115
Query: 125 KLLRVEEFEDRVMK---TLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
L+ + D+ K LSGG+ Q+VAIAR++ + ++L DEPT+ LDP++ +V+ +
Sbjct: 116 HFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEV 175
Query: 182 IKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ DL +G T++ V H++ A + + +F+ +GE+ + + ++L
Sbjct: 176 MVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQL 220
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 99.5 bits (244), Expect = 4e-20
Identities = 70/238 (29%), Positives = 127/238 (52%), Gaps = 11/238 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+IEV +L +Y + V++G+N + +GE + +LGPNGAGK+T + I+ +++ GDV +
Sbjct: 592 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 651
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMG--LSPRREDLE-AVRR 122
G SI ++ + +L VPQ + D + G + E+L+ +
Sbjct: 652 KGGSIHKQSK-AIRSILGVVPQEIAV----YHDLTARENLAFFGKIYGLKGEELKHRMES 706
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
L+L+ +EE ++ + T SGG +++ IA A+ E +I++DEPT +DP+S+ ++ +
Sbjct: 707 TLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETV 766
Query: 183 KDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
K L E + TVI H + ++ + GEV T+DE++ +LS I +
Sbjct: 767 KTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKG-ILSSNQSIKL 823
>sp|P06611|BTUD_ECOLI VITAMIN B12 TRANSPORT ATP-BINDING PROTEIN BTUD
>gi|72449|pir||QRECBD vitamin b12 transport ATP-binding
protein btuD - Escherichia coli
>gi|145445|gb|AAA23528.1| (M14031) peripheral membrane
component [Escherichia coli] >gi|1742789|dbj|BAA15477.1|
(D90813) Vitamin B12 transport protein BtuD [Escherichia
coli] >gi|1742802|dbj|BAA15489.1| (D90814) Vitamin B12
transport protein BtuD [Escherichia coli]
>gi|1788002|gb|AAC74779.1| (AE000266) ATP-binding
component of vitamin B12 transport system [Escherichia
coli K12]
Length = 249
Score = 99.1 bits (243), Expect = 5e-20
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 29 DVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFGKSIRDMNRLELAKLLAYVPQR 88
+V GE L ++GPNGAGK+TLL +AG+ KG ++ G+ + + +LA AY+ Q+
Sbjct: 22 EVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQ 81
Query: 89 VEPGFLR-VFDFVLLGRRPYMGLSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQK 147
P F V+ ++ L + R E L V AL L ++ R LSGGE Q+
Sbjct: 82 QTPPFATPVWHYLTLHQHD----KTRTELLNDVAGALAL---DDKLGRSTNQLSGGEWQR 134
Query: 148 VAIARAIAQETP-------VILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVITVMHDLT 200
V +A + Q TP ++LLDEP N+LD Q + +I+ L +G ++ HDL
Sbjct: 135 VRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLN 194
Query: 201 LALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSETYGISVK 240
LR + LK G++ R+E L L++ YG++ +
Sbjct: 195 HTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGMNFR 235
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 99.1 bits (243), Expect = 5e-20
Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVKVFG 67
+ NL +Y G+ V+ V+ V GE + +LGPNGAGKTT + GI+ + G
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP-----RDAG 58
Query: 68 KSIRDMNRLELAKL-------LAYVPQRVEP-GFLRVFDFVLLGRRPYMGLSPRREDLEA 119
I D + + L L + Y+PQ L V+D + M + R+DL A
Sbjct: 59 NIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNL-------MAVLQIRDDLSA 111
Query: 120 VRRA------LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK 173
+R ++ +E D + ++LSGGE ++V IARA+A ILLDEP +DP
Sbjct: 112 EQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPI 171
Query: 174 SQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLS 232
S ID+ RII+ L G V+ H++ L E+ + G + T E L+D +
Sbjct: 172 SVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVK 231
Query: 233 ETY 235
Y
Sbjct: 232 RVY 234
>pir||B69756 ABC transporter (ATP-binding protein) homolog ycdI - Bacillus
subtilis >gi|2415737|dbj|BAA22247.1| (AB000617) YcdI
[Bacillus subtilis] >gi|2632572|emb|CAB12080.1| (Z99105)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 231
Score = 99.1 bits (243), Expect = 5e-20
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGDVK 64
+ ++ + ++ F Y+ VL V+ D+ GEF+ I GPNGA K+TL++ + G+LK
Sbjct: 1 MNLVSLKDIVFGYSHTPVLDKVSLDIESGEFVGITGPNGASKSTLIKVMLGMLKPWEGTV 60
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRV---EPGF-LRVFDFVLLGRRPYMGLSPR--REDLE 118
K + RL + YVPQ++ GF V + V GR R ED
Sbjct: 61 TISKRNTEGKRL----TIGYVPQQISSFNAGFPSTVLELVQSGRYTKGKWFKRLNEEDHL 116
Query: 119 AVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDV 178
V +ALK++ + + R + LSGG+ QK+ IAR +A +++LDEPT +D S+
Sbjct: 117 EVEKALKMVEMWDLRHRKIGDLSGGQKQKICIARMLASNPDLLMLDEPTTAVDYDSRKGF 176
Query: 179 MRIIKDLI-GEGKTVITVMHDLTLALRFGEKFLFLKDGEVTG 219
+ L+ +TV+ V H+ +F +K + L+ GE G
Sbjct: 177 YEFMHHLVKNHNRTVVMVTHEQNEVQQFLDKVIRLERGEKGG 218
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 99.1 bits (243), Expect = 5e-20
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
++ L Y G + GV+F + GE +LGPNGAGKTT ++ ++ +L+ G+ +
Sbjct: 9 MVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWI 68
Query: 66 FGKSI-RDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
G SI R+ + +++ VPQ + + +D V + R Y GL P E E R
Sbjct: 69 AGYSIVREPGNVR--RVIGLVPQDLTADDEMSGWDNVYIQARLY-GL-PSSEARERTREV 124
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L L + E R + T SGG +K+ IA ++ V+ LDEPT LD S+ + R I+
Sbjct: 125 LDYLDLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIE 184
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISVK 240
DL T++ H + A ++ + G + T +EL+ RV ET I +K
Sbjct: 185 DLKRSAVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETVYIELK 241
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 99.1 bits (243), Expect = 5e-20
Identities = 70/238 (29%), Positives = 127/238 (52%), Gaps = 11/238 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
+IEV +L +Y + V++G+N + +GE + +LGPNGAGK+T + I+ +++ GDV +
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 60
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMG--LSPRREDLE-AVRR 122
G SI ++ + +L VPQ + D + G + E+L+ +
Sbjct: 61 KGGSIHKRSK-AIRSILGVVPQEIAV----YHDLTARENLAFFGKIYGLKGEELKHRMES 115
Query: 123 ALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRII 182
L+L+ +EE ++ + T SGG +++ IA A+ E +I++DEPT +DP+S+ ++ +
Sbjct: 116 TLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETV 175
Query: 183 KDLIGEGK-TVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
K L E + TVI H + ++ + GEV T+DE++ +LS I +
Sbjct: 176 KTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKG-ILSSNQSIKL 232
>dbj|BAA89347.1| (AB032934) orfC [Vibrio alginolyticus]
Length = 256
Score = 98.7 bits (242), Expect = 6e-20
Identities = 69/228 (30%), Positives = 119/228 (51%), Gaps = 16/228 (7%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKGDV 63
V +++ +L ++ VL+G++ +G+ + I+G +G+GK+T LRCI + G++
Sbjct: 4 VPALDIKDLHKTFGQNEVLKGISLAAHKGDVISIIGSSGSGKSTFLRCINLLETPTAGEI 63
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQ---------RVEPGF-----LRVFDFVLLGRRPYMG 109
V G+ I+ N + A Q V GF L V + V+ +G
Sbjct: 64 WVNGELIQMKNNRAGESVPANEKQVQRIRSRLAMVFQGFNLWSHLTVLENVIEAPVHVLG 123
Query: 110 LSPRREDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNN 169
+ P+ + +E LK + + E +D LSGG+ Q+ AIARA+A + V+L DEPT+
Sbjct: 124 V-PKAQAIENAEVLLKKVGLYERKDYYPGHLSGGQQQRAAIARALAVDPEVMLFDEPTSA 182
Query: 170 LDPKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
LDP+ +V+ +++DL EG+T++ V H++ A +FL G V
Sbjct: 183 LDPELVGEVLGVMRDLADEGRTMLVVTHEMAFARDVSNHVMFLHQGLV 230
>pir||E82879 ABC transporter UU539 [imported] - Ureaplasma urealyticum
>gi|6899543|gb|AAF30952.1|AE002152_11 (AE002152) ABC
transporter [Ureaplasma urealyticum]
Length = 294
Score = 98.7 bits (242), Expect = 6e-20
Identities = 75/253 (29%), Positives = 133/253 (51%), Gaps = 19/253 (7%)
Query: 8 IEVSNLEFSYNGKN-VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
IE N+ F+Y + +L+ V+F + + E++ ++G NG+GK+T+ + + G+LK K G +K+
Sbjct: 27 IEFENVYFAYTEERMILKNVSFTINDNEYVCVIGHNGSGKSTISKVLTGLLKPKSGVIKL 86
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFLRV-----FDFVLLGRRPYMGLSPRREDLEAV 120
FG I N L + V Q + F+ + F L R+ P + + +
Sbjct: 87 FGIEISAANLKYLRNNIGIVFQNPDNQFVGITAEDDIAFGLENRKV-----PPNKMWDII 141
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
A +E+ + LSGG+ Q+VAIA +A VI+ DE T+ LDPK + ++
Sbjct: 142 NDAAVATGIEDLLKKESLELSGGQKQRVAIASVLAINPKVIIFDESTSMLDPKGKNELKE 201
Query: 181 IIKDLIGEG-KTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL---EDRVLSETYG 236
++ L KT+I++ HD+ ++ +K + + +GEV I T E+ E+R+L
Sbjct: 202 LMVSLRDVAKKTIISITHDMEEVVK-ADKVIVMSNGEVQYIGTPQEIFANEERLLKMQLD 260
Query: 237 I--SVKVAKLGRE 247
I ++K+AK +E
Sbjct: 261 IPFTLKLAKTLKE 273
>emb|CAC11214.1| (AL445063) gliding motility protein (gldA) related protein
[Thermoplasma acidophilum]
Length = 260
Score = 98.7 bits (242), Expect = 6e-20
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 8 IEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKVF 66
I++ N+ Y K L GV D+ EG ILGPNG+GKTTL+R I G+LK G V
Sbjct: 6 IKIDNVSMRYGEKLALDGVTLDIPEGTIYGILGPNGSGKTTLMRIILGLLKQTAGSAIVC 65
Query: 67 G-KSIRDMNRLELAKLLAYVP------QRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEA 119
G S RD ++++ ++ YVP + + P +F F+ RR G RR D
Sbjct: 66 GYDSTRD--QMKIKEISGYVPETPILYESMTPS--ELFSFIASIRRMDEGTFRRRVD--- 118
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
+ + E+ + + +LS G QKVAI AI + ++++DE N LDP+S
Sbjct: 119 --ALIDAFGIAEYINEFIGSLSFGNRQKVAIISAILHDPKILIVDEGINGLDPRSAKLFK 176
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
I+ D+ GK ++ H L +A + L +G + T +L + + + +
Sbjct: 177 SILTDMRDHGKIIVFSTHILEIAESLCDHVAILYNGHIVANGTIADLRNEANAPSQNLEE 236
Query: 240 KVAKL 244
KL
Sbjct: 237 IFLKL 241
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 98.3 bits (241), Expect = 8e-20
Identities = 72/208 (34%), Positives = 119/208 (56%), Gaps = 17/208 (8%)
Query: 5 VKVIEVSNLEFSYNGKNV--LRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGI-LKCKG 61
+K IEV +L S++ + L GVN +V GEF+ I+GP+G+GK+TLL I + + G
Sbjct: 1 MKAIEVRDLRKSFDSGRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVPDSG 60
Query: 62 DVKVFGKSI---RDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLE 118
+ V G+ + RD++RL A+ + +V Q + + L + + E++E
Sbjct: 61 TICVAGRDLSRERDLSRLR-AEEIGFVFQLHN----LIPNLTALENVEIPMFAVKHENME 115
Query: 119 AVRRALKLLRVEEFEDRVMKT---LSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ 175
RA++LL + D+ + LSGGE Q+VAIARA+A + +IL DEPT +LD ++
Sbjct: 116 --ERAMELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSRTS 173
Query: 176 IDVMRIIKDL-IGEGKTVITVMHDLTLA 202
V+R +++L EG T++ V H+ +A
Sbjct: 174 QRVLRKLRELQEDEGVTLVVVTHEPDVA 201
>gi|11499426 cobalt transport ATP-binding protein (cbiO-2) [Archaeoglobus
fulgidus] >gi|7445783|pir||H69479 cobalt transport
ATP-binding protein (cbiO-2) homolog - Archaeoglobus
fulgidus >gi|2648707|gb|AAB89412.1| (AE000976) cobalt
transport ATP-binding protein (cbiO-2) [Archaeoglobus
fulgidus]
Length = 238
Score = 98.3 bits (241), Expect = 8e-20
Identities = 70/239 (29%), Positives = 132/239 (54%), Gaps = 12/239 (5%)
Query: 5 VKVIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
+KVIE ++ + Y +G +R V+ ++ EG+ + ++G NG+GK+TL+ +AG+L+ KG
Sbjct: 5 LKVIEADSVSYDYPDGSAGVREVSLEIFEGDRVGLIGANGSGKSTLILLLAGLLRPTKGK 64
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQRVEPGFLR--VFDFVLLGRRPYMGLSPRREDLE-A 119
+++FG+ I N E+ + + V Q + V D +L R L E++E A
Sbjct: 65 IRIFGREIDKKNVEEIRRKIGVVFQNPDDFLFNPTVRDELLYVPRQ---LEWSEEEMENA 121
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
V+ ++ + ++ LSGGE +KV IA + + V+LLDEPT +D K++ ++
Sbjct: 122 VKEYAEMFGITHLLNKPPFRLSGGEKKKVEIASVLIYKPEVLLLDEPTAYVDGKTKRLIL 181
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLK-DGEVTGIMTRDELEDRVLSETYGI 237
+I++D G T++ H+L +A + +KF+ L + + ++ L++ L E G+
Sbjct: 182 KILEDFKG---TLVIATHELDVAEKLADKFVLLNLEHRIEAAGGKEILKNEELLEKAGV 237
>gi|11498428 branched-chain amino acid ABC transporter, ATP-binding protein
(braF-2) [Archaeoglobus fulgidus]
>gi|7445741|pir||F69352 branched-chain amino acid ABC
transporter, ATP-binding protein (braF-2) homolog -
Archaeoglobus fulgidus >gi|2649779|gb|AAB90413.1|
(AE001047) branched-chain amino acid ABC transporter,
ATP-binding protein (braF-2) [Archaeoglobus fulgidus]
Length = 238
Score = 98.3 bits (241), Expect = 8e-20
Identities = 71/222 (31%), Positives = 117/222 (51%), Gaps = 13/222 (5%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGD 62
++ + EV +L +Y VLRGVN +V GE + I+G NGAGK+TL R I+G++K +
Sbjct: 1 MRAMLFEVKDLHVAYGSYEVLRGVNLEVDRGEIVSIIGSNGAGKSTLFRTISGLIKPRSG 60
Query: 63 VKVF-GKSIRDMNRLELAKL-LAYVPQ-RVEPGFLRVFDFVLLG----RRPYMGLSPRRE 115
+F G+ I + E+ + + + P+ R L V+ +LLG R+ G R E
Sbjct: 61 RIIFEGEDIAGKSPEEIVSIGITHCPEGRFLFPELSVYKNLLLGYYTKRKDKKGFKERLE 120
Query: 116 DLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ 175
+ + LK E R T+SGGE Q +AIARA+ ++LLDEP+ L PK
Sbjct: 121 YVFEIFPVLK----ERINQRA-GTMSGGEQQMLAIARALMPSPKLLLLDEPSLGLSPKLS 175
Query: 176 IDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
V ++K+ I + ++ + +L L+ ++ ++ GE+
Sbjct: 176 WSVFEVLKE-IKKDTAILVSEQNASLCLKVSDRTYVMELGEI 216
>pir||C71517 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3328845|gb|AAC68013.1| (AE001315)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 236
Score = 98.3 bits (241), Expect = 8e-20
Identities = 74/240 (30%), Positives = 128/240 (52%), Gaps = 18/240 (7%)
Query: 6 KVIEVSNLEFSYN--GKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGD 62
K + + N+ F Y G ++ V+ +V G+F+ I+GPNG GKTTL + + G+L+ G
Sbjct: 3 KQMLLENVSFRYGKTGPLIVDHVSCEVYSGDFIGIIGPNGGGKTTLTQLMLGLLQPVCGS 62
Query: 63 VKVFGKSIRDMNRLELAKLLAYVPQR--VEPGF-LRVFDFVLLGR---RPYMGLSPRRED 116
+ + S++D L + +VPQ + F + V + VL GR P+ G +ED
Sbjct: 63 ISTY--SVQDHRPLS----IGWVPQHFSYDAAFPITVKETVLSGRLATLPWYG-RYTQED 115
Query: 117 LEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQI 176
EA AL + + +++D LSGG++Q+V +ARA+A +LLDEPT N+DP +Q
Sbjct: 116 HEAAEEALLTVDLIDYKDSCFSHLSGGQIQRVLLARALAARPEFLLLDEPTANIDPVNQQ 175
Query: 177 DVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYG 236
+++I+ L + T++ + HDL + F+ + +T + + +R T+G
Sbjct: 176 KILQILSAL-NKHCTILMITHDLHHTAGCFNRVFFM-NKTLTTLADTTTISERFCCNTFG 233
>pir||S76536 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001651|dbj|BAA10382.1| (D64002) ABC transporter
[Synechocystis sp.]
Length = 284
Score = 97.9 bits (240), Expect = 1e-19
Identities = 78/244 (31%), Positives = 121/244 (48%), Gaps = 31/244 (12%)
Query: 8 IEVSNLEFSYNGKN-VLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
I V L F+Y G+ VL + + V GE L I+G NG GKTTL + G+LK G +++
Sbjct: 51 IRVRELSFAYGGQTPVLNNLAWQVAPGERLGIIGHNGCGKTTLFLLLCGLLKASAGTIQL 110
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFL-----------RVFDFVLLGRRPYMGLSPRR 114
G++ LE K L E GFL V+D + G + MGLSP +
Sbjct: 111 LGQA------LEAGKFLP------EVGFLFQNPTDQLFATSVWDDIAFGPQN-MGLSPAQ 157
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
E V +A +L + DR+ + LSGGE Q VAIA +A ++L DEPT +LD K+
Sbjct: 158 VT-ERVNQAAELTGITSLLDRLPQHLSGGEKQMVAIAGLLAMAPKILLCDEPTASLDIKA 216
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDE-LEDRVLSE 233
+ ++ + +T++ HDL L + + + G++ E + D+ L E
Sbjct: 217 RRQLINFLGQF---QQTLLISSHDLEFVLEVCNRVIIIDQGQIVADGPAQEIMADQTLME 273
Query: 234 TYGI 237
++G+
Sbjct: 274 SHGL 277
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 97.9 bits (240), Expect = 1e-19
Identities = 70/236 (29%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
+ + VSN+ + K + ++F + +GE ILGPNGAGKTT++ I G+LK +G++K
Sbjct: 4 EAVTVSNVTKHFQRKTAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGEIK 63
Query: 65 VFGKSIRDMN-RLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
+F + D R ++ +L V V PG L+V + + L R Y +E + +
Sbjct: 64 LFNRVPDDQQVREKIGVMLQEV--SVMPG-LKVDEILELFRSYYPNPLSMKELV-----S 115
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L L E+ + R K LSGG+ ++++ A A+A +++LDEPT +D S+ + I
Sbjct: 116 LTALTKEDLKTRAEK-LSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIH 174
Query: 184 DLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETYGISV 239
L +GKT+I H L A ++ LF +G++ + ++ R+ ++ ++
Sbjct: 175 GLSDQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSRIQKQSVSFTL 230
>pir||H69858 cation ABC transporter (ATP-binding protein) homolog ykoD -
Bacillus subtilis >gi|2632042|emb|CAA05601.1| (AJ002571)
YkoD [Bacillus subtilis] >gi|2633676|emb|CAB13179.1|
(Z99110) similar to cation ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 490
Score = 97.9 bits (240), Expect = 1e-19
Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 14/206 (6%)
Query: 6 KVIEVSNLEFSY--NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK--C-- 59
+++ V L FSY + K V + ++F++ +GE +++LGP+G GK++L C+ G+ C
Sbjct: 6 ELLTVEQLSFSYEEDEKPVFQDISFELQKGECVLLLGPSGCGKSSLALCLNGLYPEACDG 65
Query: 60 --KGDVKVFGKSIRDMNRLE-LAKLLAYVPQRVEPGF--LRVFDFVLLGRRPYMGLSPRR 114
G V +F K + D E + + V Q + F L V D + G P+
Sbjct: 66 IQSGHVFLFQKPVTDAETSETITQHAGVVFQDPDQQFCMLTVEDEIAFGLENLQ--IPKE 123
Query: 115 EDLEAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
E E + L LR+ +++++ TLSGG+ QKVA+A +A E +I+LDEPT+ LDP S
Sbjct: 124 EMTEKINAVLGKLRITHLKEKMISTLSGGQKQKVALACILAMEPELIILDEPTSLLDPFS 183
Query: 175 QIDVMRIIKDLIGE-GKTVITVMHDL 199
+ + ++KDL E G +++ + H L
Sbjct: 184 AREFVHLMKDLQREKGFSLLVIEHQL 209
Score = 87.4 bits (213), Expect = 2e-16
Identities = 51/192 (26%), Positives = 102/192 (52%), Gaps = 9/192 (4%)
Query: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK-GDVKV 65
V+EVS+L F+ + + + ++F + EG ++GPNG GK+TLL +A ++K + G + +
Sbjct: 294 VLEVSSLSFARGQQAIFKDISFSLREGSLTALVGPNGTGKSTLLSVLASLMKPQSGKILL 353
Query: 66 FGKSIRDMNRLELAKLLAYVPQRVEPGFL--RVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
+ + ++ EL K + +V Q E F+ V+D +L G++ E + +
Sbjct: 354 YDQPLQKYKEKELRKRMGFVFQNPEHQFVTDTVYDELLFGQK------ANAETEKKAQHL 407
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIK 183
L+ + D +S G+ +++++A + + V+LLDEPT D ++ + M +I+
Sbjct: 408 LQRFGLAHLADHHPFAISQGQKRRLSVATMLMHDVKVLLLDEPTFGQDARTAAECMEMIQ 467
Query: 184 DLIGEGKTVITV 195
+ EG V+ +
Sbjct: 468 RIKAEGTAVLMI 479
>pir||T46652 ABC transporter ZurA [imported] - Listeria monocytogenes
>gi|5019734|gb|AAD37835.1|AF104349_1 (AF104349) ABC
transporter ZurA [Listeria monocytogenes]
Length = 257
Score = 97.9 bits (240), Expect = 1e-19
Identities = 62/199 (31%), Positives = 108/199 (54%), Gaps = 5/199 (2%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGIL-KCKGDVK 64
K+IEV+N+ + Y+ ++ L ++F V +G F ++GPNG+GK+T+L+ I G+L K +G +
Sbjct: 3 KIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKSTMLKLILGVLKKQQGSIS 62
Query: 65 VFGKSIRDMNRLELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAVR 121
+FG+ D ++ F V + V G GL + +D E +
Sbjct: 63 LFGEKQADFKDWVKIGFVSQKSNAFNSAFPATVKEVVASGLTKKKGLFKTLNNKDKEDID 122
Query: 122 RALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRI 181
ALK + + ++ R + LSGG+ Q+V IARA+ +++LDEPT +D ++ +
Sbjct: 123 YALKRVEMTDYLHRNIGELSGGQQQRVFIARALVSRPELLILDEPTVGVDVENVKAFYEL 182
Query: 182 IKDL-IGEGKTVITVMHDL 199
+ +L E T++ V HDL
Sbjct: 183 LAELNRTEEMTLLLVTHDL 201
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 97.5 bits (239), Expect = 1e-19
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDV 63
+++++ +N+ + L +N +V GE +GPNGAGK+T +R + GILK +G+
Sbjct: 10 MEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEA 69
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVE--PGFL--RVFDFVLLGRRPYMGLSPRREDLEA 119
K+FGK + + +E+ K LAYVP V P V D +M L R ++
Sbjct: 70 KIFGKDVWS-DAVEIHKHLAYVPGDVSLWPNLTGGEVIDL-------FMKL---RGSVDK 118
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
RR + R + + +T S G QKVA+ A A + +LDEPT+ LDP +
Sbjct: 119 KRRDHFIERFKLDPSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQ 178
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ + GK+V+ H L+ R +K ++ GE+ T DEL
Sbjct: 179 ECVLEAKEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDEL 225
>gb|AAD33131.1|AF099015_3 (AF099015) Fe uptake system permease [Streptomyces coelicolor
A3(2)]
Length = 271
Score = 97.5 bits (239), Expect = 1e-19
Identities = 67/180 (37%), Positives = 99/180 (54%), Gaps = 7/180 (3%)
Query: 77 ELAKLLAYVPQRVEPGF-LRVFDFVLLGRRPYMGL--SPRREDLEAVRRALKLLRVEEFE 133
+LA+ +A V Q F L V + V +GR P+ L ED +R AL + +
Sbjct: 75 QLARTVAAVVQESGAEFELTVREVVAMGRTPHKRLLDGDTAEDAGLIRSALTAVDATDLA 134
Query: 134 DRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMRIIKDLIGEGKTVI 193
R LSGGE Q+V IARA+AQ+ +++LDEPTN+LD + Q+DV+ ++ L TV+
Sbjct: 135 HRPFDQLSGGERQRVLIARALAQQPSLLVLDEPTNHLDIRHQLDVLGALRRL---PATVL 191
Query: 194 TVMHDLTLALRFGEKFLFLKDGEVTGI-MTRDELEDRVLSETYGISVKVAKLGREIVPLV 252
+HDL LA + ++ L DG+VT D L ++LSE YG++ +V R P V
Sbjct: 192 VALHDLNLAAYYCDRLYVLCDGKVTAAGPPADILTSQLLSEVYGVTSEVTIHPRTGAPQV 251
>pir||T36808 probable sugar transport system ATP-binding chain - Streptomyces
coelicolor >gi|5441781|emb|CAB46805.1| (AL096811)
putative ABC sugar transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 445
Score = 97.5 bits (239), Expect = 1e-19
Identities = 66/223 (29%), Positives = 116/223 (51%), Gaps = 13/223 (5%)
Query: 6 KVIEVSNLEFSY-NGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDV 63
+ I + ++ +Y G V+ ++ D+ GEFLV+LGP+G GK+T+LR IAG+ + +G++
Sbjct: 3 RAISLHDVSKTYARGVRVVDRLSLDIAPGEFLVLLGPSGCGKSTVLRMIAGLEEITEGEL 62
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEAVRRA 123
+ G D+ E + + + P + P P+ + V
Sbjct: 63 TLDGAYANDLLPAERRMAMVFQNFALYPNMTTRGNIGF----PLRVEDPQTDHTPRVDAT 118
Query: 124 LKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPK----SQIDVM 179
++L +E+ DR+ LSGGE Q+VA+ RAI++ L+DEP +NLD K + ++
Sbjct: 119 ARMLGIEDLLDRLPAQLSGGERQRVAMGRAISRHPTAFLMDEPLSNLDAKLRNHLRAEIT 178
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMT 222
R+ ++L G T I V HD + A+ G++ L+ G + + T
Sbjct: 179 RLTREL---GVTTIYVTHDQSEAMSLGDRVAVLRGGVLQQVDT 218
>pir||C81208 ABC transporter, ATP-binding protein NMB0356 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225578|gb|AAF40799.1| (AE002392) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 254
Score = 97.5 bits (239), Expect = 1e-19
Identities = 69/232 (29%), Positives = 114/232 (48%), Gaps = 11/232 (4%)
Query: 1 MKVKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCK 60
M V + V NL+ S+ + V++ + ++ GE + +LGPNGAGKTT I G++
Sbjct: 11 MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAAD 70
Query: 61 -GDVKVFGKSIRDMNRLELAKL-LAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLE 118
G V + G+ +R + E A+L + Y+PQ +F + + + L R +D
Sbjct: 71 AGSVTLDGQELRHLPIHERARLGVGYLPQEAS-----IFRKMTVEQNIRAILEIRTKDKN 125
Query: 119 AVRRALKLL----RVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
+ R ++ L + +LSGGE ++V IAR +A + ILLDEP +DP +
Sbjct: 126 QIDREIEKLLADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIA 185
Query: 175 QIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
ID+ +II L G V+ H++ L ++ + DG V D+L
Sbjct: 186 VIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTVLASGKPDDL 237
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 97.5 bits (239), Expect = 1e-19
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 5 VKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKC-KGDV 63
+++++ +N+ + L +N +V GE +GPNGAGK+T +R + GILK +G+
Sbjct: 1 MEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEA 60
Query: 64 KVFGKSIRDMNRLELAKLLAYVPQRVE--PGFL--RVFDFVLLGRRPYMGLSPRREDLEA 119
K+FGK + + +E+ K LAYVP V P V D +M L R ++
Sbjct: 61 KIFGKDVWS-DAVEIHKHLAYVPGDVSLWPNLTGGEVIDL-------FMKL---RGSVDK 109
Query: 120 VRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVM 179
RR + R + + +T S G QKVA+ A A + +LDEPT+ LDP +
Sbjct: 110 KRRDHFIERFKLDPSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQ 169
Query: 180 RIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDEL 226
+ + GK+V+ H L+ R +K ++ GE+ T DEL
Sbjct: 170 ECVLEAKEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDEL 216
>sp|P46342|YQGK_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YQGK
>gi|7442552|pir||E69956 phosphate ABC transporter
(ATP-binding pro) homolog yqgK - Bacillus subtilis
>gi|903307|dbj|BAA09585.1| (D58414) ORF75 [Bacillus
subtilis] >gi|1303858|dbj|BAA12514.1| (D84432) YqgK
[Bacillus subtilis] >gi|2634928|emb|CAB14425.1| (Z99116)
alternate gene name: yzmF~similar to phosphate ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 260
Score = 97.1 bits (238), Expect = 2e-19
Identities = 66/227 (29%), Positives = 127/227 (55%), Gaps = 14/227 (6%)
Query: 3 VKVKVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILKCKGD 62
+K +V +V+ + Y + L+ +N + E E I+GP+G GK+T ++ + +++ +
Sbjct: 9 MKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQMTPN 68
Query: 63 VKVFGKS-------IRD-MNRLELAKLLAYVPQRVEPGFLRVFDFVLLGRRPYMGLSPRR 114
VK+ G+ ++D ++ ++L K + V Q+ P +FD V G R + G ++
Sbjct: 69 VKLAGELNYNGSNILKDKVDIVDLRKNIGMVFQKGNPFPQSIFDNVAYGPRVH-GTKNKK 127
Query: 115 EDLEAVRRALKLLRV-EEFEDRVMKT---LSGGELQKVAIARAIAQETPVILLDEPTNNL 170
+ E V ++LK + + +E +DR+ + LSGG+ Q++ IARA+A ++L+DEPT+ L
Sbjct: 128 KLQEIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALATNPDILLMDEPTSAL 187
Query: 171 DPKSQIDVMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEV 217
DP S + +I +L + T++ V H++ A R ++ F GE+
Sbjct: 188 DPISTRKIEELILEL-KDKYTIVIVTHNMQQAARVSDQTAFFYMGEL 233
>pir||H71892 osmoprotection ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4155320|gb|AAD06335.1| (AE001506)
osmoprotection ATP-binding protein [Helicobacter pylori
J99]
Length = 216
Score = 97.1 bits (238), Expect = 2e-19
Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 12/214 (5%)
Query: 6 KVIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVK 64
+++ + N+ F+Y+ + + + N + EG+FL +LG +G+GK+TLL I G+LK G VK
Sbjct: 3 EIVTIENVSFNYHNRAIFKDFNLSIQEGDFLCVLGESGSGKSTLLGLILGLLKPSLGSVK 62
Query: 65 VFGKSIRDMNRLELAKLLAYVPQR----VEPGFLRVFDFVLLGRRPYMGLSPRREDLEAV 120
+F +++ N L + + Y+ Q L+ F L G++ + EA
Sbjct: 63 IFNETL--SNNAFLRQKIGYIAQGNSLFPHLNALQNMTFCL----NLQGINKQAAQKEAK 116
Query: 121 RRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQIDVMR 180
ALK+ E D+ LSGG+ Q+V I R I +ILLDEP + LD ++ ++
Sbjct: 117 ALALKMGLDESLMDKFPNELSGGQAQRVGIIRGIIHRPELILLDEPFSALDSLNRKNLQD 176
Query: 181 IIKDLIGEG-KTVITVMHDLTLALRFGEKFLFLK 213
+IK++ T I V HD A + K L +K
Sbjct: 177 LIKEIHQNSCATFIMVTHDENEAQKLATKTLEIK 210
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.143 0.396
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89811598
Number of Sequences: 2977
Number of extensions: 3753630
Number of successful extensions: 21372
Number of sequences better than 1.0e-10: 1777
Number of HSP's better than 0.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 1664
Number of HSP's that attempted gapping in prelim test: 18463
Number of HSP's gapped (non-prelim): 2205
length of query: 257
length of database: 189,106,746
effective HSP length: 56
effective length of query: 201
effective length of database: 155,591,474
effective search space: 31273886274
effective search space used: 31273886274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)