BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0718 (iorA-2) DE:indolepyruvate ferredoxin oxidoreductase,
subunit alpha (iorA-2)
(613 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75085 indolepyruvate ferredoxin oxidoreductase, chain alph... 1242 0.0
pir||D71055 probable indolepyruvate ferredoxin oxidoreductase al... 1167 0.0
pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alph... 535 e-151
sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 527 e-148
sp|O07835|IORA_PYRKO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 526 e-148
gi|11499084 indolepyruvate ferredoxin oxidoreductase, subunit al... 497 e-139
gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha su... 477 e-133
sp|O27880|IORA_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 450 e-125
emb|CAC12141.1| (AL445066) indolepyruvate ferredoxin oxidoreduct... 427 e-118
pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (s... 92 1e-17
gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit a... 79 2e-13
pir||B72288 2-oxoacid ferredoxin oxidoreductase, alpha subunit -... 79 2e-13
sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 77 5e-13
pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 76 1e-12
sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 76 1e-12
pir||A71047 probable ferredoxin oxidoreductase beta subunit - Py... 76 1e-12
pir||D75168 2-ketoglutarate ferredoxin oxidoreductase, chain bet... 75 2e-12
pir||S22396 pyruvate synthase (EC 1.2.7.1) alpha chain [validate... 74 5e-12
gb|AAG19514.1| (AE005043) putative 2-ketoglutarate ferredoxin ox... 74 5e-12
pir||F71046 probable ferredoxin oxidoreductase alpha subunit - P... 71 4e-11
pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 71 4e-11
>pir||G75085 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-2)
PAB0718 - Pyrococcus abyssi (strain Orsay)
>gi|5458500|emb|CAB49988.1| (AJ248286) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-2)
[Pyrococcus abyssi]
Length = 613
Score = 1242 bits (3178), Expect = 0.0
Identities = 613/613 (100%), Positives = 613/613 (100%)
Query: 1 MKRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEA 60
MKRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEA
Sbjct: 1 MKRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEA 60
Query: 61 AGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYY 120
AGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYY
Sbjct: 61 AGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYY 120
Query: 121 GKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELNR 180
GKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELNR
Sbjct: 121 GKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELNR 180
Query: 181 KPVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPY 240
KPVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPY
Sbjct: 181 KPVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPY 240
Query: 241 NYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYE 300
NYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYE
Sbjct: 241 NYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYE 300
Query: 301 EGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAEKLAPKRPPG 360
EGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAEKLAPKRPPG
Sbjct: 301 EGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAEKLAPKRPPG 360
Query: 361 MCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISL 420
MCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISL
Sbjct: 361 MCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISL 420
Query: 421 ANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGT 480
ANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGT
Sbjct: 421 ANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGT 480
Query: 481 GGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGPAVIIAKRECV 540
GGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGPAVIIAKRECV
Sbjct: 481 GGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGPAVIIAKRECV 540
Query: 541 IPVIRRGETREPPIIIEEKCTGCKACILLSGCQALIYDPETRKVKIDELICTGCGICNQL 600
IPVIRRGETREPPIIIEEKCTGCKACILLSGCQALIYDPETRKVKIDELICTGCGICNQL
Sbjct: 541 IPVIRRGETREPPIIIEEKCTGCKACILLSGCQALIYDPETRKVKIDELICTGCGICNQL 600
Query: 601 CPFDAIKFREELE 613
CPFDAIKFREELE
Sbjct: 601 CPFDAIKFREELE 613
>pir||D71055 probable indolepyruvate ferredoxin oxidoreductase alpha subunit -
Pyrococcus horikoshii >gi|3257555|dbj|BAA30238.1|
(AP000005) 618aa long hypothetical indolepyruvate
ferredoxin oxidoreductase alpha subunit [Pyrococcus
horikoshii]
Length = 618
Score = 1167 bits (2985), Expect = 0.0
Identities = 561/613 (91%), Positives = 596/613 (96%)
Query: 1 MKRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEA 60
+KRLLMGNEAIAYGALE+G++FATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEA
Sbjct: 6 VKRLLMGNEAIAYGALEAGVSFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEA 65
Query: 61 AGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYY 120
AG SYAG+RSLVTMKCVGLNVAADPLMSLAYSGVEGGLV+LVADDPGPHTSQTEQDDRYY
Sbjct: 66 AGASYAGIRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVVLVADDPGPHTSQTEQDDRYY 125
Query: 121 GKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELNR 180
GKI++LPVLEPYDPQEAHDLIKYAYELSEKYKVP+IFRTTTRVNHTTADVEVGEF +LNR
Sbjct: 126 GKISLLPVLEPYDPQEAHDLIKYAYELSEKYKVPIIFRTTTRVNHTTADVEVGEFKDLNR 185
Query: 181 KPVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPY 240
P FKKDIERYVRASMEGNR+RHKWLNET++KIEEEFN++ +NW+EG+GK+GIIVEGAPY
Sbjct: 186 IPKFKKDIERYVRASMEGNRKRHKWLNETLKKIEEEFNNLDYNWIEGDGKIGIIVEGAPY 245
Query: 241 NYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYE 300
NYVKE+LPSI DFKILKLSTPHPLPRK+V++FLKSVEK +VIEEGAPFLEEEIKVVAYE
Sbjct: 246 NYVKEVLPSIEGDFKILKLSTPHPLPRKIVINFLKSVEKALVIEEGAPFLEEEIKVVAYE 305
Query: 301 EGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAEKLAPKRPPG 360
EGL VPIYGKRTG LPLEGELTPRLVKNAILK LGKE EEVS+P+EV EAE+LAPKRPP
Sbjct: 306 EGLRVPIYGKRTGYLPLEGELTPRLVKNAILKLLGKEGEEVSLPKEVEEAERLAPKRPPV 365
Query: 361 MCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISL 420
MCPGCPHRGSYRALLDALRELGYG+FDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISL
Sbjct: 366 MCPGCPHRGSYRALLDALRELGYGKFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISL 425
Query: 421 ANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGT 480
ANGQSVVM KKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGT
Sbjct: 426 ANGQSVVMGKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGT 485
Query: 481 GGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGPAVIIAKRECV 540
GGSETGRKFREIDIEALV+ IGVKYVKTVDPYDLKATKEAIKEAM+VKGPAVIIA+RECV
Sbjct: 486 GGSETGRKFREIDIEALVKGIGVKYVKTVDPYDLKATKEAIKEAMKVKGPAVIIARRECV 545
Query: 541 IPVIRRGETREPPIIIEEKCTGCKACILLSGCQALIYDPETRKVKIDELICTGCGICNQL 600
IPVIRRGETREPPI+IE+KCTGCKACILLSGC ALIYDPETRKV+IDELICTGCGICNQL
Sbjct: 546 IPVIRRGETREPPIVIEDKCTGCKACILLSGCPALIYDPETRKVRIDELICTGCGICNQL 605
Query: 601 CPFDAIKFREELE 613
CPFDAIKFREEL+
Sbjct: 606 CPFDAIKFREELQ 618
>pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-1)
PAB0855 - Pyrococcus abyssi (strain Orsay)
>gi|5458715|emb|CAB50202.1| (AJ248287) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-1)
[Pyrococcus abyssi]
Length = 648
Score = 535 bits (1363), Expect = e-151
Identities = 300/640 (46%), Positives = 404/640 (62%), Gaps = 45/640 (7%)
Query: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARL--KPEVFAEWAPNEKVALEEAA 61
LL+GN+AI GALE I YPGTPS+E+ +T+A + + V+ E++ NEKVA E A
Sbjct: 18 LLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKVAFETAL 77
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYG 121
S+AGLR++ MK VGLNVA D M+++Y GV GGLV++VADDP +SQ EQD R
Sbjct: 78 SASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSMWSSQNEQDTRAIA 137
Query: 122 KIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVG----EFVE 177
K A +PVLEP QEA D++KYA+E+SEKY VI RTTTR +H DV +G E E
Sbjct: 138 KFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKE 197
Query: 178 LNRK-PVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEG--EGKLGII 234
RK FKK+ ERYV R +HKWL ETI K EEFN+ PFNW+EG + K+GII
Sbjct: 198 GKRKFGDFKKNPERYVDIP-AFQRPKHKWLLETIEKFREEFNNSPFNWIEGPEDAKVGII 256
Query: 235 VEGAPYNYVKEILPSIGED-FKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEE 293
G Y YVKE L +G D K+LKL TP P+P L+ F + +E+V+++EE P +EE+
Sbjct: 257 APGLSYAYVKEALAWLGVDNVKVLKLGTPFPVPYGLLEKFFQGLERVLIVEELEPVVEEQ 316
Query: 294 IKVVAYEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEA--EEVSIPQEVLEAE 351
+KV A+++G++V I+GK L+P E+T R AI KFLG E I ++ + +
Sbjct: 317 VKVWAFDKGINVEIHGK--DLVPRVYEMTTRRAVEAIAKFLGLETPINFEEIDEKYKKVQ 374
Query: 352 KLAPKRPPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTE 411
++ P RPP +CP CPHR ++ ALR+ R P DIGCY L +LPPL+ + T
Sbjct: 375 EIVPPRPPSLCPACPHRNTF----FALRKAATPRAIYP--SDIGCYTLGVLPPLKTVDTT 428
Query: 412 FVMGASISLANGQSVVMN--------------KKIVATIGDSTFFHNGIQPLIDAVYKDL 457
MG SI +A+G S+ +N K I ATIGDSTFFH G+ L +A+Y
Sbjct: 429 IAMGGSIGVAHGLSIALNGSIAEEQRKTGKGKKIIAATIGDSTFFHTGLPALANAIYNRS 488
Query: 458 DVLVIILDNRTTAMTGHQPHPGTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKAT 517
+VL+++LDN TAMTG QP+PGTG + G + I IE + +A+G +V VDPYD+K T
Sbjct: 489 NVLIVVLDNLVTAMTGDQPNPGTGETPHG-PGKRILIEEVAKAMGADFVAVVDPYDIKET 547
Query: 518 KEAIKEAMQVKGPAVIIAKRECVIPVIRRGETREP----PI--IIEEKCTGCKACILLSG 571
E K+A++V+G +V++A+R C + R G+ R PI + E+KCTGCK CI G
Sbjct: 548 YETFKKALEVEGVSVVVARRACAL--YRIGQLRRAGKQWPIYQVNEDKCTGCKICINAYG 605
Query: 572 CQALIYDPETRKVKIDELICTGCGICNQLCPFDAI-KFRE 610
C A+ +DPE +K K+D L+C GCG C Q+CPFDA K RE
Sbjct: 606 CPAIYWDPEKKKAKVDPLMCWGCGGCAQVCPFDAFEKVRE 645
>sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450338|pir||F71124 probable indolepyruvate
ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257173|dbj|BAA29856.1| (AP000003) 648aa
long hypothetical indolepyruvate ferredoxin
oxidoreductase alpha subunit [Pyrococcus horikoshii]
Length = 648
Score = 527 bits (1343), Expect = e-148
Identities = 293/640 (45%), Positives = 403/640 (62%), Gaps = 41/640 (6%)
Query: 2 KRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARL--KPEVFAEWAPNEKVALEE 59
K LL+GN+AI GALE I YPGTPS+E+ +T+A + K V+ E++ NEKVA E
Sbjct: 16 KVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAMVAKKAGVYMEYSTNEKVAFET 75
Query: 60 AAGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRY 119
A S+AGLR++ MK VGLNVA D M+++Y G+ GGL+++VADDP +SQ EQD R
Sbjct: 76 ALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGINGGLIVVVADDPSMWSSQNEQDTRA 135
Query: 120 YGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVG----EF 175
K A +PVLEP QEA D++KYA+E+SEKY VI RTTTR +H DV +G E
Sbjct: 136 IAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEI 195
Query: 176 VELNRK-PVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEG--EGKLG 232
E RK FKK+ E+YV R +H WL ETI K EEFN+ PFNW+EG + K+G
Sbjct: 196 KEGKRKFGNFKKNPEKYVDIP-AFQRPKHPWLLETIEKFREEFNTSPFNWIEGPEDAKVG 254
Query: 233 IIVEGAPYNYVKEILPSIG-EDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLE 291
II G Y YVKE L +G ++ KILKL TP P+P L+ F +E+V+++EE P +E
Sbjct: 255 IIAPGLSYAYVKEALAWLGIDNVKILKLGTPFPVPYGLLEKFFNGLERVLIVEELEPVVE 314
Query: 292 EEIKVVAYEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEA--EEVSIPQEVLE 349
E++KV A++ +++ I+GK L+P E+T R A+ KFLG E I ++ +
Sbjct: 315 EQVKVWAFDNNINIEIHGK--DLVPRVYEMTTRRAVEAVAKFLGVETPINFQEIDEKYKK 372
Query: 350 AEKLAPKRPPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIW 409
+++ P RPP +CP CPHR ++ A+R+ R P DIGCY L +LPPL+ +
Sbjct: 373 VQEMVPPRPPSLCPACPHRNTF----FAIRKAATPRAIFP--SDIGCYTLGVLPPLKTVD 426
Query: 410 TEFVMGASISLANGQSVVMN--------------KKIVATIGDSTFFHNGIQPLIDAVYK 455
T MG SI +A+G S+ +N K IVATIGDSTFFH G+ L +A+Y
Sbjct: 427 TTIAMGGSIGVAHGLSIALNGALGEEQRKTGKEKKIIVATIGDSTFFHTGLPALANAIYN 486
Query: 456 DLDVLVIILDNRTTAMTGHQPHPGTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLK 515
+VL++++DN TAMTG QP+PGTG + G + I IE + RA+G +V VDPYD+K
Sbjct: 487 RSNVLIVVMDNMVTAMTGDQPNPGTGETPHG-PGKRILIEEVARAMGADFVAVVDPYDIK 545
Query: 516 ATKEAIKEAMQVKGPAVIIAKRECVIPVI--RRGETREPPI--IIEEKCTGCKACILLSG 571
T E IK+A++V+G +V++++R C + I R E ++ PI + EEKCTGCK CI G
Sbjct: 546 ETYETIKKALEVEGVSVVVSRRACALYRIGQLRREGKQWPIYQVNEEKCTGCKICINAYG 605
Query: 572 CQALIYDPETRKVKIDELICTGCGICNQLCPFDAI-KFRE 610
C A+ +D E +K ++D L+C GCG C Q+CPF A K RE
Sbjct: 606 CPAIYWDAEKKKARVDPLMCWGCGGCAQVCPFGAFEKVRE 645
>sp|O07835|IORA_PYRKO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2209070|dbj|BAA20528.1| (D86221) indolepyruvate
ferredoxin oxidoreductase alpha subunit [Pyrococcus sp.]
Length = 647
Score = 526 bits (1340), Expect = e-148
Identities = 295/641 (46%), Positives = 398/641 (62%), Gaps = 42/641 (6%)
Query: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVI---ETIARLKPEVFAEWAPNEKVALEEA 60
LL+GN AI GALE+ IA YPGTPS+E+ +T+A+ K V+ E++ NEKVA E A
Sbjct: 18 LLLGNHAIERGALEANIAVFAAYPGTPSSELTIRWQTVAK-KAGVYMEYSTNEKVAFETA 76
Query: 61 AGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYY 120
+++GLR++ MK VGLNVAAD +S GVEGG VI+VADDP +SQ EQD R Y
Sbjct: 77 LAAAWSGLRAMTAMKHVGLNVAADSFLSSVGMGVEGGFVIMVADDPSMWSSQNEQDTRVY 136
Query: 121 GKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVE--- 177
K A +PVLEP P EA ++ KYA+ELSEK+K VI RTTTR +H DV +GE E
Sbjct: 137 AKFANVPVLEPSSPHEAKEMTKYAFELSEKFKHFVILRTTTRSSHARGDVVLGELPEEIK 196
Query: 178 --LNRKPVFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEG--EGKLGI 233
+ FKKD R+V R+ H + E I KI EE N+ PFNW+EG + K+GI
Sbjct: 197 TGKRKFGKFKKDPTRFVDVPAHA-RKFHPLILEKIEKIREELNNCPFNWIEGKEDAKVGI 255
Query: 234 IVEGAPYNYVKEILPSIG-EDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEE 292
I G Y YVKE L +G ED KILKL TP P+P L+ F +EKV+++EE +EE
Sbjct: 256 IAPGLSYAYVKEALAWLGVEDVKILKLGTPFPVPYGLLGKFFDGLEKVLIVEELERVVEE 315
Query: 293 EIKVVAYEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEA--EEVSIPQEVLEA 350
++K AY++GL +PI+GK L+P E+T R AI KFLG E I ++ +
Sbjct: 316 QVKTWAYDKGLRIPIHGK--DLVPRVYEMTTRRAVEAIAKFLGLETPINFAEIDEKYEKV 373
Query: 351 EKLAPKRPPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWT 410
++ P RPP +CP CPHR S+ A+R+ + P DIGCY L +LPPL + T
Sbjct: 374 SQIVPPRPPSLCPACPHRNSF----FAIRKAAGPKAIYP--SDIGCYTLGVLPPLRTVDT 427
Query: 411 EFVMGASISLANGQSVVMN--------------KKIVATIGDSTFFHNGIQPLIDAVYKD 456
MGASI + +G S+ MN + IVATIGDSTF+H G+ L +A+Y
Sbjct: 428 TVAMGASIGIGHGLSIAMNGSLAEEEHKEGKEKQIIVATIGDSTFYHTGLPALANAIYNR 487
Query: 457 LDVLVIILDNRTTAMTGHQPHPGTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKA 516
+VL+++LDN TAMTG QP+PGTG + G + I IE + +A+G +V VDPYD+KA
Sbjct: 488 SNVLIVVLDNLVTAMTGDQPNPGTGQTPHGMG-KRIPIEDVAKAMGADFVAVVDPYDIKA 546
Query: 517 TKEAIKEAMQVKGPAVIIAKRECVIPVI----RRGETREPPIIIEEKCTGCKACILLSGC 572
T E IK+A++V+G +V+++++ C + I RRG ++E+KCTGCK CI GC
Sbjct: 547 TYETIKKALEVEGVSVVVSRQVCALYKIGQMRRRGMKWPIYHVVEDKCTGCKICIKTYGC 606
Query: 573 QALIYDPETRKVKIDELICTGCGICNQLCPFDAIKFREELE 613
A+ +DPET+K K+D +C GCG C Q+CPFDA + +E E
Sbjct: 607 PAIYWDPETKKAKVDPTMCWGCGGCAQVCPFDAFEPMKEGE 647
>gi|11499084 indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA)
[Archaeoglobus fulgidus]
>gi|6685558|sp|O28783|IORA_ARCFU INDOLEPYRUVATE
OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450334|pir||H69435 indolepyruvate ferredoxin
oxidoreductase, subunit alpha (iorA) homolog -
Archaeoglobus fulgidus >gi|2649079|gb|AAB89760.1|
(AE001000) indolepyruvate ferredoxin oxidoreductase,
subunit alpha (iorA) [Archaeoglobus fulgidus]
Length = 623
Score = 497 bits (1267), Expect = e-139
Identities = 274/622 (44%), Positives = 381/622 (61%), Gaps = 32/622 (5%)
Query: 2 KRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIA------RLKPEVFAEWAPNEKV 55
K L+GNEAIA GA+E+GI YPGTPS+E+ +T++ R K + + E++ NEKV
Sbjct: 13 KVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKMDFYMEYSANEKV 72
Query: 56 ALEEAAGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQ 115
A E A G S AG R++ TMK VG+NVAADPL S AY G GG V++ ADDP H+SQ EQ
Sbjct: 73 AFEVAVGASLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTADDPSMHSSQNEQ 132
Query: 116 DDRYYGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEF 175
D+R+YGK A LPV+EP QEA D K ++LSEK+ +P+I R+ TR++H + VE+G+
Sbjct: 133 DNRWYGKAAKLPVVEPSSVQEAKDYAKLCFDLSEKFGLPMILRSYTRLSHASGVVELGKI 192
Query: 176 VELNRKPVFKKDIERYVRASM---EGNRRRHKWLNETIRKIEEEFNSMPFNWV-EGEGKL 231
E K + + ER+ + R+ L E + KIE FNS NWV EG+G +
Sbjct: 193 PE---KEFSRVEWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMNWVDEGDGDV 249
Query: 232 GIIVEGAPYNYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLE 291
GII G Y Y KE L ++ + +LKLS+ HPLP +L+ +F+ ++KVIV+EE PF+E
Sbjct: 250 GIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIVVEEVDPFVE 309
Query: 292 EEIKVVAYEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAE 351
++ + E +YGK G +P+ E V+ I K LG + V E++
Sbjct: 310 LHVRAMGLAE-----VYGKMNGYMPMNYEYNVGRVETGIAKALGIKPSR-DYEGIVAESQ 363
Query: 352 KLA---PKRPPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAI 408
KLA P RPP +CPGCPH S+ A+ + ELG D + DIGCY L + PLE +
Sbjct: 364 KLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELG----DAALPSDIGCYTLGINKPLEGV 419
Query: 409 WTEFVMGASISLANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRT 468
MGAS+ ++NG + V+N KI+ATIGDSTF H GI PLI+AVY D +++ILDN T
Sbjct: 420 DITICMGASVGVSNGLAHVLNNKIIATIGDSTFIHAGIPPLINAVYNHADFVLVILDNST 479
Query: 469 TAMTGHQPHPGTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVK 528
T MTGHQPHPGTG G + + IE +VR GV++V+ V+PY+++ + ++ A+
Sbjct: 480 TGMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHD 539
Query: 529 GPAVIIAKRECVIPVIRRGETREPPII---IEEKCTGCKACILLSGCQALIYDPETRKVK 585
G AV+IA++ C I + R RE I+ + E CT C C+ C ALI+D E KV
Sbjct: 540 GVAVVIARQPCAI-LWSRARRREGKIVTYKVTEDCTLCMECVNTFACPALIFDGE--KVS 596
Query: 586 IDELICTGCGICNQLCPFDAIK 607
ID+ +C GC +C ++CP AIK
Sbjct: 597 IDQSLCVGCAVCAKICPNRAIK 618
>gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA)
[Sulfolobus solfataricus]
Length = 612
Score = 477 bits (1215), Expect = e-133
Identities = 269/617 (43%), Positives = 374/617 (60%), Gaps = 34/617 (5%)
Query: 2 KRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEAA 61
KRL++GNEAIA+GAL +G++ A GYPGTPSTE+IET+ + +++AEW+ NEKVA E A
Sbjct: 8 KRLILGNEAIAFGALSAGVSVAAGYPGTPSTEIIETLMKFG-KIYAEWSTNEKVAFETAY 66
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYG 121
G + G +L TMK VGLNVAADPL+S +Y+GVEG LVI+ ADDP +SQ EQD+RYYG
Sbjct: 67 GAAINGAFALTTMKHVGLNVAADPLISSSYTGVEGALVIVSADDPSMWSSQNEQDNRYYG 126
Query: 122 KIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELNRK 181
A++PV+EPYDPQ AHDL A++LS K K PVIFR+TTR+ H VE ++ +
Sbjct: 127 LHALIPVVEPYDPQSAHDLTIEAFKLSNKVKHPVIFRSTTRIGHIRGPVE----LKPPSR 182
Query: 182 PVFKKDI---ERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGA 238
PV K I +RYV R R + L +IEEE + ++ + + II G
Sbjct: 183 PVMGKVIKNPKRYVLVPENARRDRVEQLKRW-ERIEEEVEGLN-ELIDNDSENLIIASGI 240
Query: 239 PYNYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVA 298
+ YV + + + IL+L+TP P+P++L+L + + ++V+++EEG P +E ++K +
Sbjct: 241 SFGYVIDAIKELEIKANILRLTTPVPIPKRLILKAVSNSKRVLIVEEGEPIVEYQVKDLL 300
Query: 299 YEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAEKLAPKRP 358
Y++G+ V ++GK L+ GE+T V A KF G + I + LE + P RP
Sbjct: 301 YDQGVRVELHGK--DLVSRVGEMTLDKVYYAFSKFFG-----LDIVTDYLEVPQDIPPRP 353
Query: 359 PGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASI 418
P +CPGCPHR S+ L A+ + + I GDIGCY L LLPP +A + MG+SI
Sbjct: 354 PALCPGCPHRSSFIDLKKAITMASFKPNETFISGDIGCYTLGLLPPFDAQDSSTDMGSSI 413
Query: 419 SLANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHP 478
+ANG +A IGDSTFFH+GI L +AVY +LV++LDNR+TAMTG QP P
Sbjct: 414 GIANGVYRATGNIPIAVIGDSTFFHSGISALANAVYNQTPMLVLVLDNRSTAMTGQQPSP 473
Query: 479 GTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKAT----KEAIKEAMQVKGPAVII 534
+EIDI + + +GVKYV+ VDP+D+ ++ A+K K PAV+I
Sbjct: 474 S----------KEIDIGEVAKGLGVKYVRYVDPFDVNSSIRELSNALKWVKDNKQPAVVI 523
Query: 535 AKRECVIPVIRRGETREPP--IIIEEKCTGCKACILLSGCQALIYDPETRKVKIDELICT 592
AKR C + V+ E P I+ EKCTGC C C A+I +K +ID C
Sbjct: 524 AKRACALLVMDNVEESNLPKAIVDLEKCTGCSICYDYFTCPAII-PRNDKKAEIDNYTCI 582
Query: 593 GCGICNQLCPFDAIKFR 609
GCG C +CPF AI +
Sbjct: 583 GCGACVPICPFKAISLK 599
>sp|O27880|IORA_METTH INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450335|pir||G69114 indolepyruvate oxidoreductase,
alpha subunit - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622988|gb|AAB86318.1| (AE000938)
indolepyruvate oxidoreductase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 618
Score = 450 bits (1146), Expect = e-125
Identities = 255/615 (41%), Positives = 363/615 (58%), Gaps = 24/615 (3%)
Query: 2 KRLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARL--KPEVFAEWAPNEKVALEE 59
K L+GNEA A+ESG+ A+ YPGTPS+E+ ++ + + ++ E++ NEKVALE
Sbjct: 14 KLFLLGNEATVRAAIESGVGVASTYPGTPSSEIGNVLSGIAKRAGMYFEFSVNEKVALEV 73
Query: 60 AAGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRY 119
AA + +G+RS MK VGLNVA+D MS AY+GV G+V+L ADDP +SQ EQD+R+
Sbjct: 74 AAAAAASGVRSFTFMKHVGLNVASDSFMSTAYTGVRAGMVVLTADDPSMFSSQNEQDNRH 133
Query: 120 YGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELN 179
Y ++A LP+LEP DPQE + + +A+ELSE Y +PV+ RTTTRV+H VEVG +
Sbjct: 134 YARLACLPLLEPSDPQEVLEFMNHAFELSEDYGLPVLLRTTTRVSHMRGVVEVGSRMREP 193
Query: 180 RKPVFKKDIERYVRASMEGNRRRHKWLNET----IRKIEEEFNSMPFNWVEGEGKLGIIV 235
+ F+KD ER+V K +++ IR E E N + FN + +LG++
Sbjct: 194 SEGFFRKDPERFVPVPATARVMHRKLVDKMKELRIRADESELNRV-FNG-GSDSELGVVA 251
Query: 236 EGAPYNYVKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIK 295
G +NYV + L S+G + +LKL +P P LV +FL +++V+V+EE P +E E+
Sbjct: 252 SGGAFNYVYDALESLGLELPVLKLGFTYPFPAGLVEEFLSGLKRVLVVEEVDPIMEREVL 311
Query: 296 VVAYEEGLSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEA--EEVSIPQEVLEAEKL 353
VA L + ++GK G LP E +++ AI G + E +P
Sbjct: 312 AVAGSARLDLDVHGKLDGTLPEIYEYNEDILRKAISGLTGAPSVERECDVPD-------- 363
Query: 354 APKRPPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFV 413
P+RPP +CPGCPHR Y A+ A EL +I DIGCY L + PP A
Sbjct: 364 IPERPPSLCPGCPHRAVYYAVRRAADELELSGDEIIFPTDIGCYTLGIEPPYSAADYLLS 423
Query: 414 MGASISLANGQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTG 473
MG+SI + G S ++IV+ IGDSTFFH GI PLI+AV+ ++++LDNRTTAMTG
Sbjct: 424 MGSSIGTSCGFSAATTQRIVSFIGDSTFFHAGIPPLINAVHNKQRFVLVVLDNRTTAMTG 483
Query: 474 HQPHPGTGGSETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGPAVI 533
QPHPG G + EI IE +VRA GV++V+TV+P ++K T E +K A++ + AV+
Sbjct: 484 GQPHPGLPVDGMGDEAPEISIEEIVRASGVEFVETVNPMNIKRTSETVKRALEHESVAVV 543
Query: 534 IAKRECVIPVIRRGETREPPIIIE-EKCTGCKACILLSGCQALIYDPETRKVKIDELICT 592
I+K C ++ G R P+ ++ EKC C CI C A++ +V ID L C
Sbjct: 544 ISKYPC---MLSSGAVRGRPMAVDGEKCDLCLECIRDLACPAMV--TREGEVFIDPLKCR 598
Query: 593 GCGICNQLCPFDAIK 607
GC +C Q+CP AIK
Sbjct: 599 GCSVCLQICPAGAIK 613
>emb|CAC12141.1| (AL445066) indolepyruvate ferredoxin oxidoreductase, alpha subunit
related protein [Thermoplasma acidophilum]
Length = 605
Score = 427 bits (1086), Expect = e-118
Identities = 240/614 (39%), Positives = 358/614 (58%), Gaps = 30/614 (4%)
Query: 3 RLLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEKVALEEAAG 62
+ ++GNEAIA A+ +G++ A GYPGTPSTE+IE + + P+V+ EW+ NEK+A E A G
Sbjct: 6 KFMIGNEAIAAAAVHAGVSVAAGYPGTPSTEIIENVRKFGPDVYVEWSVNEKIAFETAYG 65
Query: 63 VSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYGK 122
+ +G LV +K VGLNVA+DP+ S +Y+G+ G LVI+ ADD +SQ EQD+R+YG
Sbjct: 66 AAMSGGTGLVAVKHVGLNVASDPMFSSSYTGITGSLVIVSADDSSMWSSQNEQDNRFYGL 125
Query: 123 IAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVGEFVELNRKP 182
A++PVLEPYD Q A+DL A+E+S + PVI RTTTR+ H ++V + E R
Sbjct: 126 HALIPVLEPYDVQSAYDLTLKAFEVSRLFHHPVILRTTTRIGHVRSNVIYEDHHEPLRGK 185
Query: 183 VFKKDIERYVRASMEGNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPYNY 242
V KD YV A R K L E R+I + +S+ +G G II G Y+Y
Sbjct: 186 VI-KDPNTYVLAPENARSDRKKQL-ERWREISDYLSSLCSYEPDG-GDSIIITGGISYSY 242
Query: 243 VKEILPSIGEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYEEG 302
+KE L G +L+L P+P +L+ + + +V+V+EE P +E ++ + G
Sbjct: 243 LKEALEDAGIHTNVLRLDATVPIPESAILNHINGIRRVLVVEENDPVMEMQVADILLRNG 302
Query: 303 LSVPIYGKRTGLLPLEGELTPRLVKNAILKFLGKEAEEVSIPQEVLEAEKLAPKRPPGMC 362
+V +GK L+P+EGE+T +K + F G + + E L P RPP +C
Sbjct: 303 KAVEFHGK--DLIPIEGEMTFEKLKAGLFAFFG-----MKYSGSYFQDEPLTP-RPPALC 354
Query: 363 PGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGASISLAN 422
PGCPHR S+ + L + + GDIGCY L LPP + MG+S+ ++N
Sbjct: 355 PGCPHRSSFFDIKKGLSRVSMQ--NSFFSGDIGCYTLGALPPFREQDSATNMGSSLGISN 412
Query: 423 GQSVVMNKKIVATIGDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQPHPGTGG 482
G ++ VA IGDSTFFH+GI+ + +AVY + ++++LDNR+TAMTG QP P T
Sbjct: 413 GVFRSTDQVPVAVIGDSTFFHSGIEGVANAVYNNTAEIIVVLDNRSTAMTGQQPSPSTA- 471
Query: 483 SETGRKFREIDIEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQ----VKGPAVIIAKRE 538
IDI + RA+G++YV+T DP+D+ A ++A+++A + PAVIIAKR
Sbjct: 472 ---------IDIGNVCRAMGIEYVETFDPFDVDAGEKAVQQAAEYVKKTLKPAVIIAKRA 522
Query: 539 CVIPVIRRGETREPPIIIE-EKCTGCKACILLSGCQALIYDPETRKVKIDELICTGCGIC 597
C + V+ + ++ P ++ +CTGC C C +++ +K ID+ C GCG C
Sbjct: 523 CALEVLEKVDSETPKAYVDSNRCTGCTICYDFFTCPSIL-PLSNKKATIDD-SCIGCGAC 580
Query: 598 NQLCPFDAIKFREE 611
++CPF+AI + E
Sbjct: 581 VEVCPFNAISVKGE 594
>pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (strain MSB8)
>gi|4982338|gb|AAD36824.1|AE001814_6 (AE001814)
2-oxoisovalerate oxidoreductase, beta subunit, putative
[Thermotoga maritima]
Length = 356
Score = 92.4 bits (226), Expect = 1e-17
Identities = 85/345 (24%), Positives = 157/345 (44%), Gaps = 27/345 (7%)
Query: 1 MKRLLM-GNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEWAPNEK--VAL 57
MK+L+M GNEAIA A+ +G YP TP +E+ E +AR PEV + E +
Sbjct: 4 MKKLMMKGNEAIAESAIRAGCRLYFAYPITPQSEIAEYMARRLPEVGGVFLQTESEIATV 63
Query: 58 EEAAGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDD 117
G + G R + + G ++ + + +A + + V +V PG Q Q D
Sbjct: 64 NMVYGAACTGKRVMTSTSSPGFSLMQEGISYIAGAELPCVFVDVVRGGPGLGNIQPSQGD 123
Query: 118 RY-------YGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADV 170
+ +G ++ VL P QEA DL + A++L+++Y+ PV+ + V
Sbjct: 124 YFQAVKGGGHGDYRLI-VLAPSTLQEAVDLTQLAFDLADRYRNPVLILADGMIGQMMEPV 182
Query: 171 EVGEFVELNRKP---------VFKKDIERYVRASME--GNRRRHKWLNETIRKIEEEFNS 219
E+ E +L+ P ++ R +++ G + +K L E R IE
Sbjct: 183 ELPEMRDLSTLPDHSDWALRGARNREPHRIAAFNIDPVGLEKMNKRLQEKYRLIEASEQR 242
Query: 220 MPFNWVEGEGKLGIIVEGAPYNYVKEILPSIGED---FKILKLSTPHPLPRKLVLDFLKS 276
V+G L ++ G +K ++ S+ E+ + + T P P++ + + K
Sbjct: 243 WEEYRVDGAEYL-MVGYGTMGRILKSVVDSLREEGIPAGLFRPVTLWPFPKRRLKELAKK 301
Query: 277 VEKVIVIEEGAPFLEEEIKVVAYEEGLSVPIYGKRTGLLPLEGEL 321
V+ + V+E + + E+++ ++ E + V YG+ G++P E+
Sbjct: 302 VQLIFVVEMSSGQMVEDVQ-ISVEGKVPVHFYGRMGGVVPTPEEI 345
>gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
>gi|6685587|sp|O29781|KORA_ARCFU 2-OXOGLUTARATE SYNTHASE
SUBUNIT KORA (2-KETOGLUTARATE OXIDOREDUCTASE ALPHA
CHAIN) (KOR) (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE
ALPHA SUBUNIT) >gi|7433685|pir||E69308
2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain korA - Archaeoglobus fulgidus
>gi|2650159|gb|AAB90768.1| (AE001072) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
Length = 346
Score = 78.8 bits (191), Expect = 2e-13
Identities = 90/355 (25%), Positives = 147/355 (41%), Gaps = 50/355 (14%)
Query: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPE---VFAEWAPNEKVALEEA 60
L+ GNEA GA+ +G F GYP TPS+E+ +A L P+ VF + +E ++
Sbjct: 5 LIQGNEAAVRGAINAGCNFFAGYPITPSSEIAHGMAELLPKFGGVFIQ-MEDEIASISAV 63
Query: 61 AGVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGV-EGGLVILVADDPGPHT------SQT 113
G S AG ++ G ++ + + Y+ + E +VI GP T SQ
Sbjct: 64 IGASMAGAVAMTATSGPGFSLMQE---GMGYAAITESPVVIFNVMRAGPSTGIPTAPSQG 120
Query: 114 EQDDRYYGKIAILP--VLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVE 171
+ YG P VL P ++ + L A++++ ++ PVI + V H V
Sbjct: 121 DAMQARYGSHGDYPIVVLAPASVKDMYYLTVEAFKIAFRFSTPVIVLSDEIVGHMRESVA 180
Query: 172 VGEFVELNRKPVFKKDIERYVRASMEGNRRRHKWLNETIRKIE----EEFNSM------- 220
+ E+ + E+ + ++G RR L T + EE+ +
Sbjct: 181 LPPLGEI-------ESYEKRAKNLIDGRRRHRTGLVHTENGLPTTDLEEYEKLLRLLFAK 233
Query: 221 -----PFNWVEGEGKLGIIVEGAPYNYVK---EILPSIGEDFKILKLSTPHPLPRKLVLD 272
P EGE + + G+ Y K ++L G ILKL + P P V
Sbjct: 234 FDDFRPMVRFEGEEGVLFVAYGSSYRLAKSSAKLLAEKGVSAGILKLESLFPFPEDAVRR 293
Query: 273 FLKSVEKVIVIEEGAPFLEEEIKVVAYEEGLSVPIYGKRTGLLP------LEGEL 321
+ K + V+V E A + +E++ V V +G +LP +EGEL
Sbjct: 294 YSKKADLVVVPEMNAGQVVKEVERVCCCRVKGVSYFGSL--ILPEKLVEIVEGEL 346
>pir||B72288 2-oxoacid ferredoxin oxidoreductase, alpha subunit - Thermotoga
maritima (strain MSB8)
>gi|4981713|gb|AAD36240.1|AE001773_9 (AE001773)
2-oxoacid ferredoxin oxidoreductase, alpha subunit
[Thermotoga maritima]
Length = 558
Score = 78.8 bits (191), Expect = 2e-13
Identities = 106/381 (27%), Positives = 172/381 (44%), Gaps = 53/381 (13%)
Query: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPE--VFAEWAPNEKVALEEAA 61
LL G EA+ GA+ G F + YP +PST V+ +A+ K + + E A +E A+
Sbjct: 194 LLNGAEAVGLGAIAGGCNFVSSYPMSPSTSVLVFLAQHKNDFGIVVEQAEDEIAAMNMII 253
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHT---SQTEQDD- 117
G YAG R LVT G + + L SLA +E VI +A PGP T ++TEQ D
Sbjct: 254 GAWYAGARGLVTTSGGGFALMEEAL-SLA-GMIESPAVIHLAQRPGPATGLPTRTEQGDL 311
Query: 118 --RYYGKIAILP--VLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVG 173
Y P + P + +EA L + A+ +++KY+VPV T + + ++
Sbjct: 312 NLALYAGHGDFPRVIYAPGNVEEAFYLTQKAFNVADKYQVPVFVLTDQYLVDSYYNLPGF 371
Query: 174 EFVELNRKPVFKKDIERYVRASM--------------EGNRRRHKWLNETIRKIEEEFNS 219
+ EL + F K Y+R ++ EG R ++ I E+FN+
Sbjct: 372 DLNELKVEKHFIKTTRDYIRYAITEDGISPRGIPGYGEGLVRVDSDEHDEFGHITEDFNT 431
Query: 220 MPFNWVEGEGKLGIIVEGAPYNYVKEIL-PSI--GEDFKILKLSTPHPL-PRKLVLDFLK 275
V + G ++ KEI+ P + E++++L ++ L P K ++ L
Sbjct: 432 R-VRMVNKRLRKGETLK-------KEIVKPKLIGDENYRVLLVAWGSTLEPIKEAIEGLD 483
Query: 276 SV-----EKVIVIEEG-APFLEEEIKVVAYEEGLSVPIYGKRTG-LLPLEGELTPRLVKN 328
V +V I+E A + E+ KVVA E G TG L ++T +K+
Sbjct: 484 GVALLHFSQVWPIDESVATYFEKAEKVVAVE--------GNATGQFANLIRQVTGFHIKD 535
Query: 329 AILKFLGKEAEEVSIPQEVLE 349
ILK+ G + + +++ E
Sbjct: 536 RILKYNGLQFSVEELKEKIAE 556
>sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2127893|pir||E64334 2-oxoacid--ferredoxin
oxidoreductase (EC 1.2.7.-) alpha chain - Methanococcus
jannaschii >gi|1592279|gb|AAB98264.1| (U67483)
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha
(korA) [Methanococcus jannaschii]
Length = 366
Score = 77.3 bits (187), Expect = 5e-13
Identities = 89/329 (27%), Positives = 143/329 (43%), Gaps = 59/329 (17%)
Query: 5 LMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEVFAEW--APNEKVALEEAAG 62
+ GN+A A GA+++G F GYP TPSTE+ E +AR P+V + +E ++ G
Sbjct: 6 MQGNQACAKGAIKAGCRFFAGYPITPSTEIAEAMARELPKVGGYYIQMEDEIGSIAAVIG 65
Query: 63 VSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQ---TEQDDRY 119
S+ GL+++ G ++ + + AY E V++ GP T Q Q D
Sbjct: 66 ASWGGLKAMTATSGPGFSLMQENI-GFAYM-TETPCVVVDIQRGGPSTGQPTMASQGDMM 123
Query: 120 ------YGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEVG 173
+G ++ L P QE +D A+ +EKY++PV V H V +
Sbjct: 124 QCRWGSHGDYEVI-ALAPSSVQEMYDFTIMAFNYAEKYRIPVFVMADEIVGHMREKVILH 182
Query: 174 EFVE-LNRK--------------------PVFKK-----------DIERYVRASMEGNRR 201
+ +E +NRK PVF + D Y S E + +
Sbjct: 183 DNIEIINRKKPEEKPCKKPYPFDKLIPEMPVFGEGYNVHITGLTHDERGYPDVSPETHDK 242
Query: 202 RHKWLNETIRKIEEEFNSMPFNWVEGE---GKLGIIVEGAPYNYVKEILPSI---GEDFK 255
+ + IRK ++E W EGE ++ + G+P VK + ++ G D
Sbjct: 243 LVRRIVNKIRKNKDEI----IKW-EGENLDAEIVFVCYGSPSRTVKHAVRNLREKGLDVG 297
Query: 256 ILKLSTPHPLPRKLVLDFLKSVEKVIVIE 284
++L T +P P L L LK+ +KV+V E
Sbjct: 298 YIRLITVYPFPDDL-LKKLKA-KKVVVPE 324
>pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
- Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622136|gb|AAB85529.1| (AE000875) 2-oxoglutarate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 378
Score = 76.1 bits (184), Expect = 1e-12
Identities = 100/380 (26%), Positives = 157/380 (41%), Gaps = 65/380 (17%)
Query: 5 LMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPE---VFAEWAPNEKVALEEAA 61
+ GN+A A GA+++G F GYP TPSTE+ E +A L P VF + +E AL
Sbjct: 9 IQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQ-MEDEIGALGAVI 67
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQ---TEQDDR 118
G ++G+R + G ++ + + A + E LVI+ P T Q Q D
Sbjct: 68 GAVWSGVRGMTATSGPGFSLMQEHVGYAAMT--ETPLVIVNVQRGSPSTGQPTMASQSDM 125
Query: 119 Y------YGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEV 172
+G I+ L P QE D A+ L+E+Y+VPV+ V H + +
Sbjct: 126 MQARWGSHGDYEII-ALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREKITI 184
Query: 173 GEFVELNRK-----------------------PVF-----------KKDIERYVRAS-ME 197
+ V++ ++ P F D Y AS E
Sbjct: 185 PDRVKIRKRRGPSVPPEEFLPFSAPEDGVPEMPAFGDGYRIPVTGLTHDEGGYPDASNPE 244
Query: 198 GNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPYNYVKEILPSIGED---F 254
G+ R K L + I + + + + E + + +I GAP V + ED
Sbjct: 245 GHHRLVKRLCDKILRHRDRISDVQEELTE-DAYITVISYGAPSRSVATAVKMAREDGVRA 303
Query: 255 KILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYEEGLSVPIYGKRTGL 314
LK++TP P P V + K++V+E + E++ VA G++ L
Sbjct: 304 GYLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFYEVQRVA--AGMA------EVEL 355
Query: 315 LP-LEGEL-TPRLVKNAILK 332
LP + GE+ P + N ILK
Sbjct: 356 LPKIGGEIHRPEEILNMILK 375
>sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 376
Score = 76.1 bits (184), Expect = 1e-12
Identities = 100/380 (26%), Positives = 157/380 (41%), Gaps = 65/380 (17%)
Query: 5 LMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPE---VFAEWAPNEKVALEEAA 61
+ GN+A A GA+++G F GYP TPSTE+ E +A L P VF + +E AL
Sbjct: 7 IQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQ-MEDEIGALGAVI 65
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQ---TEQDDR 118
G ++G+R + G ++ + + A + E LVI+ P T Q Q D
Sbjct: 66 GAVWSGVRGMTATSGPGFSLMQEHVGYAAMT--ETPLVIVNVQRGSPSTGQPTMASQSDM 123
Query: 119 Y------YGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEV 172
+G I+ L P QE D A+ L+E+Y+VPV+ V H + +
Sbjct: 124 MQARWGSHGDYEII-ALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREKITI 182
Query: 173 GEFVELNRK-----------------------PVF-----------KKDIERYVRAS-ME 197
+ V++ ++ P F D Y AS E
Sbjct: 183 PDRVKIRKRRGPSVPPEEFLPFSAPEDGVPEMPAFGDGYRIPVTGLTHDEGGYPDASNPE 242
Query: 198 GNRRRHKWLNETIRKIEEEFNSMPFNWVEGEGKLGIIVEGAPYNYVKEILPSIGED---F 254
G+ R K L + I + + + + E + + +I GAP V + ED
Sbjct: 243 GHHRLVKRLCDKILRHRDRISDVQEELTE-DAYITVISYGAPSRSVATAVKMAREDGVRA 301
Query: 255 KILKLSTPHPLPRKLVLDFLKSVEKVIVIEEGAPFLEEEIKVVAYEEGLSVPIYGKRTGL 314
LK++TP P P V + K++V+E + E++ VA G++ L
Sbjct: 302 GYLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFYEVQRVA--AGMA------EVEL 353
Query: 315 LP-LEGEL-TPRLVKNAILK 332
LP + GE+ P + N ILK
Sbjct: 354 LPKIGGEIHRPEEILNMILK 373
>pir||A71047 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3258094|dbj|BAA30777.1| (AP000006) 284aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 284
Score = 75.7 bits (183), Expect = 1e-12
Identities = 59/202 (29%), Positives = 89/202 (43%), Gaps = 7/202 (3%)
Query: 358 PPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGAS 417
P +CPGC A +A+ +L D+ + IGC A P A G +
Sbjct: 21 PTALCPGCGGGTVLNAFANAIDQLKIDPRDLVVVSGIGCSAWIASPYFLADTLHTTHGRA 80
Query: 418 ISLANGQSVVMNKKIVATI-GDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQP 476
I+ A G V + K V I GD G LI A +++D+ VI+++N MTG Q
Sbjct: 81 IAFATGVKVGLPDKYVVVISGDGDLASIGGNHLIHAARRNVDITVILVNNFIYGMTGGQV 140
Query: 477 HPGT--GGSETGRKFREID----IEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGP 530
P T G T +R I+ + V A G YV + E+IK+A+ KG
Sbjct: 141 APTTPFGAITTTTPYRNIEHPLKVAETVAAAGASYVARWTTAHVYQLIESIKKALMTKGF 200
Query: 531 AVIIAKRECVIPVIRRGETREP 552
+++ +C + RR + +EP
Sbjct: 201 SLVEVISQCPVQFGRRNKMKEP 222
>pir||D75168 2-ketoglutarate ferredoxin oxidoreductase, chain beta (korb-1)
PAB0344 - Pyrococcus abyssi (strain Orsay)
>gi|5457937|emb|CAB49427.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit beta (korB-1)
[Pyrococcus abyssi]
Length = 284
Score = 74.9 bits (181), Expect = 2e-12
Identities = 60/202 (29%), Positives = 87/202 (42%), Gaps = 7/202 (3%)
Query: 358 PPGMCPGCPHRGSYRALLDALRELGYGRFDIPIHGDIGCYALSLLPPLEAIWTEFVMGAS 417
P +CPGC A +A+ +L D+ + IGC A P A G +
Sbjct: 21 PTALCPGCGGGTVLNAFANAIDQLKIDPRDLVVVSGIGCSAWIASPYFLADTLHTTHGRA 80
Query: 418 ISLANGQSVVMNKKIVATI-GDSTFFHNGIQPLIDAVYKDLDVLVIILDNRTTAMTGHQP 476
I+ A G V + K V I GD G LI A +++D+ VI+++N MTG Q
Sbjct: 81 IAFATGVKVGLPDKYVVVISGDGDLASIGGNHLIHAARRNIDITVILVNNFIYGMTGGQV 140
Query: 477 HPGT--GGSETGRKFREID----IEALVRAIGVKYVKTVDPYDLKATKEAIKEAMQVKGP 530
P T G T +R I+ I V A G YV + E+IK A+ KG
Sbjct: 141 APTTPFGAITTTTPYRNIEHPLKIAETVAAAGASYVARWTTAHVYQLIESIKRAITTKGF 200
Query: 531 AVIIAKRECVIPVIRRGETREP 552
+++ +C + RR +EP
Sbjct: 201 SLVEVISQCPVQFGRRNRMKEP 222
>pir||S22396 pyruvate synthase (EC 1.2.7.1) alpha chain [validated] -
Halobacterium salinarum >gi|43498|emb|CAA45825.1|
(X64521) pyruvate synthase [Halobacterium halobium]
Length = 628
Score = 73.7 bits (178), Expect = 5e-12
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEV--FAEWAPNEKVALEEAA 61
L+ G+ AIAYGA+++G F +GYP TP T+ + +L P++ +E +E A A
Sbjct: 222 LMSGSHAIAYGAIDAGCRFISGYPMTPWTDAFTIMTQLLPDMGGVSEQVEDEIAAAAMAV 281
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGP------------- 108
G S+AG +++ G + ++PL LA E LV+L A GP
Sbjct: 282 GASHAGAKAMSGSSGGGFALMSEPL-GLA-EMTETPLVLLEAQRAGPSTGMPTKPEQADL 339
Query: 109 -HTSQTEQDDRYYGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTT 167
H T Q D + ++A P DP+E ++ + A+E++ Y++PVI +++
Sbjct: 340 EHVLYTSQGDSH--RVA----FGPKDPKECYEQTRTAFEIAYDYQIPVILLYDQKLSGEY 393
Query: 168 ADVEVGEF 175
+V+ F
Sbjct: 394 RNVDASFF 401
>gb|AAG19514.1| (AE005043) putative 2-ketoglutarate ferredoxin oxidoreductase
(alpha); KorA [Halobacterium sp. NRC-1]
Length = 640
Score = 73.7 bits (178), Expect = 5e-12
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 4 LLMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEV--FAEWAPNEKVALEEAA 61
L+ G+ AIAYGA+++G F +GYP TP T+ + +L P++ +E +E A A
Sbjct: 234 LMSGSHAIAYGAIDAGCRFISGYPMTPWTDAFTIMTQLLPDMGGVSEQVEDEIAAAAMAV 293
Query: 62 GVSYAGLRSLVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGP------------- 108
G S+AG +++ G + ++PL LA E LV+L A GP
Sbjct: 294 GASHAGAKAMSGSSGGGFALMSEPL-GLA-EMTETPLVLLEAQRAGPSTGMPTKPEQADL 351
Query: 109 -HTSQTEQDDRYYGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTT 167
H T Q D + ++A P DP+E ++ + A+E++ Y++PVI +++
Sbjct: 352 EHVLYTSQGDSH--RVA----FGPKDPKECYEQTRTAFEIAYDYQIPVILLYDQKLSGEY 405
Query: 168 ADVEVGEF 175
+V+ F
Sbjct: 406 RNVDASFF 413
>pir||F71046 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258091|dbj|BAA30774.1| (AP000006) 385aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 385
Score = 71.0 bits (171), Expect = 4e-11
Identities = 81/334 (24%), Positives = 138/334 (41%), Gaps = 60/334 (17%)
Query: 5 LMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEV--FAEWAPNEKVALEEAAG 62
+ G+EAIA A+ +G F GYP TP++E+ E +A P + +E ++ G
Sbjct: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLIDGVVIQMEDEIGSIAAVIG 72
Query: 63 VSYAGLRSLVTMKCVGLNVAADPLMSLAYSGV-EGGLVILVADDPGPHTSQTEQDDRYYG 121
S+AG++++ G ++ + ++ Y+ + E +V++ GP T Q + G
Sbjct: 73 ASWAGVKAMTATSGPGFSLMQE---NIGYAVMTETPIVVVNVQRGGPSTGQPTLPSQ--G 127
Query: 122 KIA----------ILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVE 171
I L VL P QEA D A+ L+EKY+ PVI + V H V
Sbjct: 128 DIMQSIWGTHGDHTLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVY 187
Query: 172 VGEFVEL---NRK-----------------------PVFKKDIERYVRASMEGNRRRHKW 205
+ E E+ NRK P+F K YV + R +
Sbjct: 188 IPEPDEIEIVNRKLPGSEEEAKLPFGDPHGDGVPPMPIFGKGYRTYVTGLTHDEKGRPRT 247
Query: 206 LNETI--RKIEEEFNSMPFNWVE---------GEGKLGIIVEG----APYNYVKEILPSI 250
+ + R I F + N + + ++ I+ G + +KE L ++
Sbjct: 248 VEREVHERLIRRIFEKIEKNKKDIFDYEARELDDAEIAIVTTGIVARSALRAIKE-LRNL 306
Query: 251 GEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIE 284
G +LK++T P +L+ + VE++ V E
Sbjct: 307 GIKAGLLKINTIWPFDFELIEKVAEKVERIYVPE 340
>pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-2)
PAB0346 - Pyrococcus abyssi (strain Orsay)
>gi|5457939|emb|CAB49429.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-2)
[Pyrococcus abyssi]
Length = 385
Score = 71.0 bits (171), Expect = 4e-11
Identities = 84/334 (25%), Positives = 138/334 (41%), Gaps = 60/334 (17%)
Query: 5 LMGNEAIAYGALESGIAFATGYPGTPSTEVIETIARLKPEV--FAEWAPNEKVALEEAAG 62
+ G+EAIA A+ +G F GYP TP++E+ E +A P V +E ++ G
Sbjct: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAIIG 72
Query: 63 VSYAGLRSLVTMKCVGLNVAADPLMSLAYSGV-EGGLVILVADDPGPHTSQ---TEQDD- 117
S+AG +++ G ++ + ++ Y+ + E +V++ GP T Q Q D
Sbjct: 73 ASWAGAKAMTATSGPGFSLMQE---NIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDI 129
Query: 118 -----RYYGKIAILPVLEPYDPQEAHDLIKYAYELSEKYKVPVIFRTTTRVNHTTADVEV 172
+G +++ VL P QEA D A+ L+EKY+ PVI + V H V +
Sbjct: 130 MQSIWGTHGDHSLI-VLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYI 188
Query: 173 GEFVEL---NRK-----------------------PVFKKDIERYVRASMEGNRRRHKWL 206
E E+ NRK P+F + YV R R + +
Sbjct: 189 PEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTV 248
Query: 207 -----NETIRKIEEEFNSMPFNWVEGEGK-----------LGIIVEGAPYNYVKEILPSI 250
IR+I E+ + + E + GI+ A +KE L +
Sbjct: 249 EREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSA-LRAIKE-LREL 306
Query: 251 GEDFKILKLSTPHPLPRKLVLDFLKSVEKVIVIE 284
G +LK++T P +L+ VE++ V E
Sbjct: 307 GIKAGLLKINTIWPFDFELIEKIAGKVERIYVPE 340
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.410
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241668487
Number of Sequences: 2977
Number of extensions: 10793046
Number of successful extensions: 27937
Number of sequences better than 1.0e-10: 21
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 27838
Number of HSP's gapped (non-prelim): 27
length of query: 613
length of database: 189,106,746
effective HSP length: 56
effective length of query: 557
effective length of database: 155,591,474
effective search space: 86664451018
effective search space used: 86664451018
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 168 (69.9 bits)