BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0742 (pflX) DE:pyruvate formate-lyase activating enzyme
(pflX)
(335 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75091 pyruvate formate-lyase activating enzyme (pflx) PAB0... 699 0.0
pir||B71052 hypothetical protein PH1113 - Pyrococcus horikoshii ... 577 e-164
emb|CAA58794.1| (X83963) pyruvate formate lyase activating prote... 542 e-153
gi|11499543 pyruvate formate-lyase activating enzyme (pflX) [Arc... 326 3e-88
pir||H69008 conserved hypothetical protein MTH1069 - Methanobact... 320 2e-86
sp|Q58087|Y674_METJA HYPOTHETICAL PROTEIN MJ0674 >gi|2128025|pir... 312 5e-84
pir||H72634 probable pyruvate formate lyase activating protein A... 286 3e-76
pir||A70364 conserved hypothetical protein aq_729 - Aquifex aeol... 160 2e-38
pir||D72416 hypothetical protein TM0109 - Thermotoga maritima (s... 158 1e-37
pir||E72317 conserved hypothetical protein - Thermotoga maritima... 129 5e-29
gb|AAG23565.1|AF244616_1 (AF244616) hypothetical protein [Carbox... 99 5e-20
pir||G75119 pyruvate formate-lyase activating enzyme related pro... 80 5e-14
pir||A71012 hypothetical protein PH1391 - Pyrococcus horikoshii ... 79 6e-14
pir||F69230 pyruvate formate-lyase activating enzyme related pro... 72 8e-12
>pir||B75091 pyruvate formate-lyase activating enzyme (pflx) PAB0742 -
Pyrococcus abyssi (strain Orsay)
>gi|5458543|emb|CAB50031.1| (AJ248286) pyruvate
formate-lyase activating enzyme (pflX) [Pyrococcus
abyssi]
Length = 335
Score = 699 bits (1785), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MGAREALPKYFAILEGDDVPNFMLAKKVEVKPEDSIEEMWNSHEEGMDKLRENDIKDNPS 60
MGAREALPKYFAILEGDDVPNFMLAKKVEVKPEDSIEEMWNSHEEGMDKLRENDIKDNPS
Sbjct: 1 MGAREALPKYFAILEGDDVPNFMLAKKVEVKPEDSIEEMWNSHEEGMDKLRENDIKDNPS 60
Query: 61 FSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVPSY 120
FSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVPSY
Sbjct: 61 FSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVPSY 120
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLP 180
TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLP
Sbjct: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLP 180
Query: 181 FILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYW 240
FILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYW
Sbjct: 181 FILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYW 240
Query: 241 EVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRPEY 300
EVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRPEY
Sbjct: 241 EVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRPEY 300
Query: 301 KAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
KAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG
Sbjct: 301 KAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
>pir||B71052 hypothetical protein PH1113 - Pyrococcus horikoshii
>gi|3257529|dbj|BAA30212.1| (AP000005) 337aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 337
Score = 577 bits (1472), Expect = e-164
Identities = 261/337 (77%), Positives = 309/337 (91%), Gaps = 2/337 (0%)
Query: 1 MGAREALPKYFAILEGDDVPNFMLAKKVEVK--PEDSIEEMWNSHEEGMDKLRENDIKDN 58
MGA EALPKYFAIL+ ++ PNFMLA+ V+V+ ++ ++ +W H+EG+DKL+END+ +N
Sbjct: 1 MGAEEALPKYFAILKREEEPNFMLARNVKVRFRGDEDLDGLWVIHDEGLDKLKENDLTEN 60
Query: 59 PSFSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVP 118
P +LLDLKA IA+KILE CTLCEIKCRVNRK+S GYCRVKE+L+ASDFLHYGEEPELVP
Sbjct: 61 PERNLLDLKAKIADKILERCTLCEIKCRVNRKKSPGYCRVKESLVASDFLHYGEEPELVP 120
Query: 119 SYTVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPN 178
SYTVFFSGCNFRCVFCQNWDISQFR+G+ Y PEYMA+KIE+A++ GA+NVNFVGGEPTPN
Sbjct: 121 SYTVFFSGCNFRCVFCQNWDISQFRIGVEYLPEYMAIKIEKAFQLGARNVNFVGGEPTPN 180
Query: 179 LPFILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPR 238
LPFILETLRYV VPIP+VWNSNMYMSE++MKLLDG+VDIYLGDFKYGNDRCA+KYSKVPR
Sbjct: 181 LPFILETLRYVRVPIPIVWNSNMYMSEEAMKLLDGVVDIYLGDFKYGNDRCAMKYSKVPR 240
Query: 239 YWEVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRP 298
YWEVVTRNFLLAK HFRAEFLIRHLVMPNHL+CCT+PIL+WI+ENLG+++RVNVMFQYRP
Sbjct: 241 YWEVVTRNFLLAKEHFRAEFLIRHLVMPNHLDCCTKPILRWIAENLGREIRVNVMFQYRP 300
Query: 299 EYKAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
EYKA+EY+EI+R L L+EM EAE++ ++ G KNALVG
Sbjct: 301 EYKAIEYDEIARTLTLDEMREAEKITKKLGFKNALVG 337
>emb|CAA58794.1| (X83963) pyruvate formate lyase activating protein homologue
[Thermococcus litoralis]
Length = 350
Score = 542 bits (1381), Expect = e-153
Identities = 254/335 (75%), Positives = 288/335 (85%), Gaps = 2/335 (0%)
Query: 3 AREALPKYFAILEGDDVPNFMLAKKVEVK--PEDSIEEMWNSHEEGMDKLRENDIKDNPS 60
A++ALP YF+IL G++ PNF +K+VEV ++ +E +W +HEEGM+KLREND+K+NP
Sbjct: 16 AKDALPHYFSILSGEEKPNFFYSKQVEVNFGEDEDLESLWETHEEGMEKLRENDLKENPK 75
Query: 61 FSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVPSY 120
SLLDLKA+IA K+LESC LCE KC NR E +GYCRVKE+L+ASDFLH GEEPELVPSY
Sbjct: 76 KSLLDLKALIAYKMLESCELCEFKCHANRFEEIGYCRVKESLVASDFLHIGEEPELVPSY 135
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLP 180
TVFFSGCNFRC FCQNWDISQ+RVGL Y P+ MA+KI AY GAKNVNFVGGEPTPNLP
Sbjct: 136 TVFFSGCNFRCAFCQNWDISQYRVGLRYSPKEMAVKIAVAYAEGAKNVNFVGGEPTPNLP 195
Query: 181 FILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYW 240
FILETL+YV VPIPVVWNSNMYMSE SMKLLDGIVD+YLGDFK+GND ALKYSK PRYW
Sbjct: 196 FILETLKYVKVPIPVVWNSNMYMSEKSMKLLDGIVDVYLGDFKWGNDEDALKYSKAPRYW 255
Query: 241 EVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRPEY 300
E VTRNFLLAKNH++AEFLIRHLVMP HLECCTRPIL+WISENLG+DVRVNVMFQYRPEY
Sbjct: 256 ETVTRNFLLAKNHYKAEFLIRHLVMPGHLECCTRPILEWISENLGRDVRVNVMFQYRPEY 315
Query: 301 KAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
+A EY EI R L +EM +A LV+EF LKNALVG
Sbjct: 316 RAHEYPEIDRRLTNDEMLKAAELVKEFRLKNALVG 350
>gi|11499543 pyruvate formate-lyase activating enzyme (pflX) [Archaeoglobus
fulgidus] >gi|7445242|pir||H69494 pyruvate formate-lyase
activating enzyme (pflX) homolog - Archaeoglobus
fulgidus >gi|2648591|gb|AAB89304.1| (AE000968) pyruvate
formate-lyase activating enzyme (pflX) [Archaeoglobus
fulgidus]
Length = 332
Score = 326 bits (826), Expect = 3e-88
Identities = 165/333 (49%), Positives = 217/333 (64%), Gaps = 21/333 (6%)
Query: 7 LPKYFAILEGDDVPNFMLAKKVEVKPEDSIEEMWNSHE----EGMDKLRENDIKDN-PSF 61
L +Y AI G+ + F +AK++ + +S++EM H E L D+ D P +
Sbjct: 4 LERYEAINRGEALAKFQIAKRINAEKAESLDEMLEIHRKLKREFAKVLESGDVPDEKPDY 63
Query: 62 SLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKET-LIASDFLHYGEEPELVPSY 120
S + LK I ++L+SC CE +C VNR E G+C+ T +S+FLH GEEPELVPS+
Sbjct: 64 SFMHLKRDILYEMLKSCNFCERRCGVNRYEKKGFCKCGVTSYFSSEFLHVGEEPELVPSH 123
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAY------RFGAKNVNFVGGE 174
T+FF+ C F CVFCQN+DI Y +Y+ E AY R G+KNVNFVGG
Sbjct: 124 TIFFNRCTFACVFCQNYDIV-------YEDDYIVDARELAYIIDVRRRQGSKNVNFVGGN 176
Query: 175 PTPNLPFILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYS 234
P + I E L YV +PVVWNSNMY SE+ ++++ VD++LGDFKYGND CA KYS
Sbjct: 177 PDQHAHTIAEILLYVESNVPVVWNSNMYHSEELAEVIEDFVDVWLGDFKYGNDECARKYS 236
Query: 235 KVPRYWEVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMF 294
KV YW+VVTRNFL AK + E LIRHLVMPNH+ECCT PI++W++ENLG+D R N+MF
Sbjct: 237 KVANYWKVVTRNFLRAKEN--GELLIRHLVMPNHIECCTEPIVRWVAENLGRDTRFNLMF 294
Query: 295 QYRPEYKAMEYEEISRMLVLEEMEEAERLVREF 327
QY P +KA EY EI+R L EEME+A R+ ++
Sbjct: 295 QYYPTFKAWEYPEIARRLTREEMEKAARIAEKY 327
>pir||H69008 conserved hypothetical protein MTH1069 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622167|gb|AAB85558.1| (AE000877) pyruvate formate
lyase activating protein [Methanobacterium
thermoautotrophicum]
Length = 332
Score = 320 bits (811), Expect = 2e-86
Identities = 161/336 (47%), Positives = 218/336 (63%), Gaps = 9/336 (2%)
Query: 1 MGAREALPKYFAILEGDDVPNFMLAKKVEVKPEDS--IEEMWNSHEEGMDKLRENDIKDN 58
M ++AL Y ++ +G +FM+A + ++ + E+W HE ++K E
Sbjct: 3 MSLKDALHHYLSVRDGRTDASFMVAARTPASFHETSGMSELWREHER-IEKGIECSGACE 61
Query: 59 PSFSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVP 118
SF LDLK IA +IL C+LC +C VNR G+C V E +AS+FLHYGEE LVP
Sbjct: 62 RSF--LDLKIEIAERILGECSLCPWRCGVNRHREQGHCGVMEPRVASEFLHYGEEAPLVP 119
Query: 119 SYTVFFSGCNFRCVFCQNWDISQF-RVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTP 177
S+T+FFSGC RCVFCQNWDISQ G + + +A IE R GA NVNFVGG+PTP
Sbjct: 120 SHTIFFSGCTLRCVFCQNWDISQNPSAGRHIEVDELAALIEERRRMGAANVNFVGGDPTP 179
Query: 178 NLPFILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVP 237
LP+IL L V++ +PVVWNSNMYM+ +S++L+ G D+YL DFK+GN CA + +
Sbjct: 180 ALPYILRVLSRVSISVPVVWNSNMYMTRESLRLIMGAADLYLTDFKFGNSECAERLAGAG 239
Query: 238 RYWEVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYR 297
Y+EVV+RN L+ + +IRHLV+P HLECCT+PI+ W++ENLG D +N+M QYR
Sbjct: 240 NYFEVVSRNHLMIAGE---DMIIRHLVLPGHLECCTKPIISWVAENLGTDTVMNIMGQYR 296
Query: 298 PEYKAMEYEEISRMLVLEEMEEAERLVREFGLKNAL 333
P Y+A Y EI+R L +EE+EEA R GL+N +
Sbjct: 297 PLYRASAYPEINRPLYIEELEEARRWALSEGLENLI 332
>sp|Q58087|Y674_METJA HYPOTHETICAL PROTEIN MJ0674 >gi|2128025|pir||B64384 hypothetical
protein homolog MJ0674 - Methanococcus jannaschii
>gi|1591388|gb|AAB98668.1| (U67514) pyruvate formate
lyase-activating enzyme isolog (pflX) [Methanococcus
jannaschii]
Length = 338
Score = 312 bits (790), Expect = 5e-84
Identities = 163/336 (48%), Positives = 223/336 (65%), Gaps = 18/336 (5%)
Query: 7 LPKYFAILEGDDVPNFMLAKKVEVKPEDSIE--EMWNSHEEGMDKLRENDIKDNP----S 60
L +Y A+ + F++AK +EV+ +E E+W H + + K+ ++ N
Sbjct: 3 LGRYLAVSKDLAPAKFIIAKCIEVEEFKGLELNELWEIHNKVLKKVDFDNFDFNDLEYVK 62
Query: 61 FSLLDLKAVIANKILESCTLCEIKCRVNRKESVGYCRVKETLIASDFLHYGEEPELVPSY 120
+LLDLK IA I ++C CE +C VNR+ G+CR+KE+ +++FLH GEE LVPS+
Sbjct: 63 PNLLDLKVEIAKNIFKNCHFCEHRCYVNRETERGFCRIKESYYSTEFLHLGEERVLVPSH 122
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVG-------LNYRPEYMALKIERAYRFGAKNVNFVGG 173
T+FF GCNF+CVFCQNWDISQ + Y P+ MA KI + R +KNVNFVGG
Sbjct: 123 TIFFCGCNFKCVFCQNWDISQVYFDKTIPNHCIPYNPKEMA-KIIKHKRDYSKNVNFVGG 181
Query: 174 EPTPNLPFILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKY 233
+PTP+L IL+TL Y++ IPVVWNSNMY++ + M LL G+VD+YL DFK+GN+ C +
Sbjct: 182 DPTPHLLSILKTLSYLDKNIPVVWNSNMYLTVEGMHLLKGVVDVYLTDFKFGNNECGERL 241
Query: 234 SKVPRYWEVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVM 293
SKV Y++++ RN LL K+ E +IRHLVMPNHL+CCT I +IS+NL V VNVM
Sbjct: 242 SKVKNYFDIIKRNHLLIKDE---EVIIRHLVMPNHLDCCTEKIFDFISKNLDNAV-VNVM 297
Query: 294 FQYRPEYKAMEYEEISRMLVLEEMEEAERLVREFGL 329
FQYRPEYKA EY +I+R L EE+E+A L ++ L
Sbjct: 298 FQYRPEYKAKEYPDINRRLTYEEIEKALELAEKYNL 333
>pir||H72634 probable pyruvate formate lyase activating protein APE1535 -
Aeropyrum pernix (strain K1) >gi|5105220|dbj|BAA80534.1|
(AP000061) 403aa long hypothetical pyruvate formate
lyase activating protein [Aeropyrum pernix]
Length = 403
Score = 286 bits (723), Expect = 3e-76
Identities = 152/352 (43%), Positives = 214/352 (60%), Gaps = 30/352 (8%)
Query: 5 EALPKYFAILEGDDVPNFMLAKKVEV--KPEDSI-----EEMWNSHEEGMDKLR------ 51
E L Y ++ G++ P + + + EV ED I EE+W HE + R
Sbjct: 48 EKLGWYSRVMRGEEPPKYRIVRTFEVGFDSEDDIRRALTEELWREHERVAGEFRRLFRSL 107
Query: 52 ------ENDIKDNPSFSLLDLKAVIANKILESCTLCEIKCRVNRKESV-GYCRVK-ETLI 103
E DIKD SL+D+K + ++ C LCE +CRV R +S G CR+ E +
Sbjct: 108 REGGSYEGDIKDARP-SLMDVKVELVRRLASPCELCERRCRVERAKSRRGACRLAWEVYV 166
Query: 104 ASDFLHYGEEPELVPSYTVFFSGCNFRCVFCQNWDISQFRVGLNY--RPEYMALKIERAY 161
S FLH GEE LVPS T+F+ GCNF CVFCQNWD+SQ++ + P + +R
Sbjct: 167 HSAFLHLGEEAPLVPSGTIFYGGCNFTCVFCQNWDVSQWKARDAHIVTPRRLGEIQDRLA 226
Query: 162 RFGAKNVNFVGGEPTPNLPFILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGD 221
GA+N+N VGG+P P+L I+E+++Y + P +WNSNMYM+ +++ +L ++DI+L D
Sbjct: 227 EAGARNINHVGGDPVPSLHVIVESMKYASHLKPQLWNSNMYMTLEALDILVDLIDIWLPD 286
Query: 222 FKYGNDRCALKYSKVPRYWEVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWIS 281
K+GNDRCA++ S VPRYWEV TRN LLA H + +IRHLVMP H+ECCT+P+L+WI+
Sbjct: 287 LKFGNDRCAMRLSAVPRYWEVTTRNILLAAEH--GDMIIRHLVMPGHVECCTKPVLRWIA 344
Query: 282 ENLGKDVRVNVMFQYRPEYKAM----EYEEISRMLVLEEMEEAERLVREFGL 329
ENLG V VN+M QY P+ + ++ EI+R E+EEA R + GL
Sbjct: 345 ENLGDRVLVNIMDQYHPDNLVLRMPHKWPEIARRPSRREIEEAWRYAEQLGL 396
>pir||A70364 conserved hypothetical protein aq_729 - Aquifex aeolicus
>gi|2983324|gb|AAC06914.1| (AE000705) hypothetical
protein [Aquifex aeolicus]
Length = 337
Score = 160 bits (401), Expect = 2e-38
Identities = 104/286 (36%), Positives = 154/286 (53%), Gaps = 24/286 (8%)
Query: 64 LDLKAVIANKILESCTLCEIKCRVNRKES--VGYCRVKETLIASDFL-HYGEEPELVP-- 118
L+ + A +LE C +C C VNR E GYC+V + +D+ H+GEE +
Sbjct: 53 LEKRVEKALNMLEKCKVCPHTCGVNRLEDDKKGYCKVGRYAVVADYFPHFGEEFPIRGYR 112
Query: 119 -SYTVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTP 177
S T+FFS CN RCV+CQN+D+S G +PE +A + +G N+N V P+
Sbjct: 113 GSGTIFFSYCNMRCVYCQNYDVSHLGAGRIMKPEDLAEVMLELQDYGCHNINLVS--PSH 170
Query: 178 NLPFILETLRYV---NVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYS 234
+P ILE L + IP+V+N++ + S +++KLLDGIVDIYL D KY N KYS
Sbjct: 171 VVPQILEALLIAVERGLRIPIVYNTSSFDSLETLKLLDGIVDIYLADLKYLNKEYGRKYS 230
Query: 235 KVPRYWEV---VTRNFLLAKNHFRAE--------FLIRHLVMPNHLECCTRPILKWISEN 283
KV Y V R + + L+RHLV+PN + T+ +++++ +
Sbjct: 231 KVKDYPSVAKEAIREMYRQVGNLEVDERGIAVRGLLVRHLVLPNDIS-TTKEVMEFL-RS 288
Query: 284 LGKDVRVNVMFQYRPEYKAMEYEEISRMLVLEEMEEAERLVREFGL 329
+ + VNVM QY P YKA +Y E+SR + EE ++A + F L
Sbjct: 289 IDPKLAVNVMKQYHPYYKAWDYPELSRRITEEEYKKALEEAQGFTL 334
>pir||D72416 hypothetical protein TM0109 - Thermotoga maritima (strain MSB8)
>gi|4980600|gb|AAD35203.1|AE001697_3 (AE001697) pyruvate
formate lyase activating enzyme, putative [Thermotoga
maritima]
Length = 328
Score = 158 bits (395), Expect = 1e-37
Identities = 94/268 (35%), Positives = 146/268 (54%), Gaps = 18/268 (6%)
Query: 75 LESCTLCEIKCRVNRKESVGYCRVK-ETLIASDFLHYGEEPEL---VPSYTVFFSGCNFR 130
LE C LC KC V+R + G C + I++ LH+GEEP + + TVFFSGCN +
Sbjct: 28 LEKCELCPRKCGVDRYRTTGICGLPARAKISNAVLHFGEEPPISGKTGAGTVFFSGCNMK 87
Query: 131 CVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLPFILETLRYV- 189
CV+CQN SQ +G E +A + GAK +N V PTP+LPFI+ LR
Sbjct: 88 CVYCQNMGFSQKGIGTEVEVEDLAEIFLILQKHGAKTLNLV--TPTPHLPFIISALRIAI 145
Query: 190 --NVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYWEVVTRNF 247
+ +P+V+N++ Y + ++LL+G+VDIYL D +Y ++ + KYSK P YW VV +
Sbjct: 146 ENGLNLPIVYNTSGYEDPEILRLLEGVVDIYLSDVRYSDNEASKKYSKTPDYWTVVQKAI 205
Query: 248 L-------LAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRPEY 300
+ + ++R LV+P ++ + I ++S +L + +++M QY P +
Sbjct: 206 VEMFRQVGIFDEEKMKGLIVRILVLPGNVVDYSE-IFSFLS-SLSTRIPLSIMNQYIPHF 263
Query: 301 KAMEYEEISRMLVLEEMEEAERLVREFG 328
A ++ EISR L E E+ L +G
Sbjct: 264 DAQKFPEISRKLNQNEYEKILELAERYG 291
>pir||E72317 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981461|gb|AAD36005.1|AE001756_8 (AE001756)
conserved hypothetical protein [Thermotoga maritima]
Length = 286
Score = 129 bits (321), Expect = 5e-29
Identities = 92/260 (35%), Positives = 127/260 (48%), Gaps = 29/260 (11%)
Query: 66 LKAVIANKILESCTLCEIKCRVNR-KESVGYCRVKETLIASDF-LHYGEEPELVP---SY 120
+K+ + + LE C LC C VNR G C V + + S + H+GEE LV S
Sbjct: 1 MKSELFYRKLEKCDLCPRNCGVNRLMGEKGACGVANSPVVSSWGPHFGEERILVGRGGSG 60
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLP 180
TVFF+ CN +CV+CQN++ISQ +G E + G +N+N V PT +P
Sbjct: 61 TVFFTYCNLKCVYCQNYEISQLGIGKEITVEDLLRIFTELQDMGVENLNLV--TPTHQIP 118
Query: 181 FILETLRYVNVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRY- 239
FI++ + IPVV+N Y S D++ L+G VDIY+ DFKY + K S V Y
Sbjct: 119 FIVDAFERMEKEIPVVYNCGGYESVDTIISLEGFVDIYMPDFKYSDPELGEKLSGVKDYP 178
Query: 240 --------------WEVVTRNFLLAKNHFRAEFLIRHLVMPNHLECCTRPILKWISENLG 285
E V RN ++ K L+RHLV+P LE I + L
Sbjct: 179 RFALEALKVMIDQMGEPVIRNGVMKKG-----VLVRHLVLPGFLEDSFGVI--DLLSTLE 231
Query: 286 KDVRVNVMFQYRPEYKAMEY 305
VN+M Q+ P Y+A EY
Sbjct: 232 PKPLVNIMAQFYPAYRAKEY 251
>gb|AAG23565.1|AF244616_1 (AF244616) hypothetical protein [Carboxydothermus hydrogenoformans]
Length = 171
Score = 99.5 bits (244), Expect = 5e-20
Identities = 61/172 (35%), Positives = 97/172 (55%), Gaps = 9/172 (5%)
Query: 78 CTLCEIKCRVNRKESV-GYCRVKET-LIASDFLHYGEEPELVPSYT--VFFSGCNFRCVF 133
CTLC C+VNR G+C ++AS H+GEE ++ +F+S C +CV
Sbjct: 2 CTLCPHNCQVNRSRGERGFCGGGYLPVVASYGPHFGEERLXWGTWFRHIFYSHCTXKCVC 61
Query: 134 CQNWDISQFRVGLNYRPEYMALKIERAYRFGAKNVNFVGGEPTPNLPFILETLRYV---N 190
QN +ISQ G RP+ +A + R G N+N V PT +P I++ +
Sbjct: 62 SQNSEISQXGEGEELRPQDLAKIMLILQRRGCHNINXVS--PTHYVPAIVKAVLIAAEEG 119
Query: 191 VPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYWEV 242
+ IP+V+N++ Y + ++++LL+GIVDIY+ D K+G+D KY+K P Y+ +
Sbjct: 120 LKIPLVYNTSGYENVETLRLLEGIVDIYMPDIKFGDDEIGKKYAKAPGYFAI 171
>pir||G75119 pyruvate formate-lyase activating enzyme related protein
(act-like) PAB1859 - Pyrococcus abyssi (strain Orsay)
>gi|5458183|emb|CAB49672.1| (AJ248285) pyruvate
formate-lyase activating enzyme related protein
(act-like) [Pyrococcus abyssi]
Length = 348
Score = 79.6 bits (193), Expect = 5e-14
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 78 CTLCEIKCRVNRKESVGYCRVKETLIASDF-LHYGEEPELVP----------------SY 120
C LC ++C ++ + G C+++ + L+YG+ + ++
Sbjct: 17 CELCPLRCIIDEGKR-GSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSCAF 75
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIER-AYRFGAKNVNFVGGEPTPNL 179
++ GCN C CQNW+ISQ Y + I R A + +++ + EPT
Sbjct: 76 SIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPTIWY 135
Query: 180 PFILETLRYVNVP-IPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPR 238
F+L+T + + + +N Y++E+ + L +D D K +DR +K + VP
Sbjct: 136 EFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRFYMKIASVPN 195
Query: 239 YWEVVTRNFLLAKNHFRAEFLIRHLVMP--NHLECCTRPILKWISENLGKDVRVNVMFQY 296
E R +AK F + +L++P N E R +W+ + LG D V+ ++
Sbjct: 196 -GEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVH-FSRF 253
Query: 297 RPEYKAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
P YK + +E +E+A ++ +E GLK +G
Sbjct: 254 FPHYKLLNLPPTP----IETLEKAYKIAKEEGLKFVYLG 288
>pir||A71012 hypothetical protein PH1391 - Pyrococcus horikoshii
>gi|3257814|dbj|BAA30497.1| (AP000006) 348aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 348
Score = 79.2 bits (192), Expect = 6e-14
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 78 CTLCEIKCRVNRKESVGYCRVKETLIASDF-LHYGEEPELVP----------------SY 120
C LC ++C ++ + G C+++ + L+YG+ + +
Sbjct: 17 CELCPLRCIIDEGKR-GSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSCAL 75
Query: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNY----RPEYMALKIERAYRFGAKNVNFVGGEPT 176
++ GCN C CQNW+ISQ Y PE + + A + +++ + EPT
Sbjct: 76 SIGTVGCNMHCKHCQNWEISQADESFPYLQDATPEAI---VSLAKHYECESIAYTYNEPT 132
Query: 177 PNLPFILETLRYVNVP-IPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSK 235
F+L+T + + + +N Y++E+ + L +D D K +D+ +K +
Sbjct: 133 IWYEFVLDTAKLARKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDKFYMKIAS 192
Query: 236 VPRYWEVVTRNFLLAKNHFRAEFLIRHLVMP--NHLECCTRPILKWISENLGKDVRVNVM 293
VP E R +AK F+ + +L++P N E R +W+ ENLG D V+
Sbjct: 193 VPS-GEPSRRIAEIAKKEFKIHVELTYLIIPTLNDKEEEIREFARWVVENLGDDTPVH-F 250
Query: 294 FQYRPEYKAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
++ P YK + +E +E+A ++ +E GLK +G
Sbjct: 251 SRFFPHYKLLNLPPTP----IETLEKAYKIAKEEGLKFVYLG 288
>pir||F69230 pyruvate formate-lyase activating enzyme related protein -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622075|gb|AAB85472.1| (AE000871) pyruvate
formate-lyase activating enzyme related protein
[Methanobacterium thermoautotrophicum]
Length = 304
Score = 72.2 bits (174), Expect = 8e-12
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 22/261 (8%)
Query: 78 CTLCEIKCRVNRKESV-GYCRVKETLIASDFLHYGEEPELVPSYTVFFSGCNFRCVFCQN 136
C LCE +C NR + G C ET IA Y E + SY+V F C FRC +C
Sbjct: 7 CMLCEWRCGANRSDGERGVCGASETEIA-----YTSISETLRSYSVTFLCCPFRCAYCNA 61
Query: 137 WDISQF-RVGLNYRPEYMALKIERAYRFGAK------NVNFVGGEPTPNLPFILETLRYV 189
+ ISQ+ G YR A ++ K N++F GGEP+ + P+I E +R V
Sbjct: 62 YRISQYPHSGWIYRGHVEAEELADEAITAIKSHERISNISFTGGEPSIHTPYIEELVRRV 121
Query: 190 --NVPIPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPRYWEVVTRNF 247
+ + V+ +N + + +++ L G+ ++ + K +D + P E V RN
Sbjct: 122 REEIDVSVILATNGFSTPGTLRRLIGLTSLFSFEIKALSDELHRNLTGAPA--EPVLRNA 179
Query: 248 LLAKNHFRAEF-LIRHLVMPNHLECCTRPILKWISENLGKDVRVNVMFQYRPEYKAMEYE 306
F + + R +V+P + R I +I+ ++ ++ + +RP + +
Sbjct: 180 AHLAGRFPDKIRVFRTVVIPGINDHEIREIAAFIA-SIDPEIPYR-LIGFRPNFMLYYHR 237
Query: 307 EISRMLVLEEMEE--AERLVR 325
R L+ +EE AE L R
Sbjct: 238 GPGRELMERLVEECRAEGLER 258
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.140 0.429
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132595143
Number of Sequences: 2977
Number of extensions: 5863030
Number of successful extensions: 11836
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 11791
Number of HSP's gapped (non-prelim): 14
length of query: 335
length of database: 189,106,746
effective HSP length: 52
effective length of query: 283
effective length of database: 157,985,422
effective search space: 44709874426
effective search space used: 44709874426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)