BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0751 (PAB0751) DE:Hypothetical protein
         (147 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||A75093 hypothetical protein PAB0751 - Pyrococcus abyssi (st...   285  2e-76
pir||F71050 hypothetical protein PH1101 - Pyrococcus horikoshii ...   258  2e-68

>pir||A75093 hypothetical protein PAB0751 - Pyrococcus abyssi (strain Orsay)
           >gi|5458558|emb|CAB50046.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 147
           
 Score =  285 bits (721), Expect = 2e-76
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MYYKNLYLVVKLEDLRKQLEELKKRLEVLEERIDPVDEVMLSIKARLRKKLETLPELDEE 60
           MYYKNLYLVVKLEDLRKQLEELKKRLEVLEERIDPVDEVMLSIKARLRKKLETLPELDEE
Sbjct: 1   MYYKNLYLVVKLEDLRKQLEELKKRLEVLEERIDPVDEVMLSIKARLRKKLETLPELDEE 60

Query: 61  KAAKILKALANPDRIRIMKMLSERPMGFKEIKDELGVESPTVSHHLKLLLKTRMIRKREK 120
           KAAKILKALANPDRIRIMKMLSERPMGFKEIKDELGVESPTVSHHLKLLLKTRMIRKREK
Sbjct: 61  KAAKILKALANPDRIRIMKMLSERPMGFKEIKDELGVESPTVSHHLKLLLKTRMIRKREK 120

Query: 121 YEITNDGLLFLRILEIMSALEEGEEDV 147
           YEITNDGLLFLRILEIMSALEEGEEDV
Sbjct: 121 YEITNDGLLFLRILEIMSALEEGEEDV 147


>pir||F71050 hypothetical protein PH1101 - Pyrococcus horikoshii
           >gi|3257517|dbj|BAA30200.1| (AP000005) 147aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 147
           
 Score =  258 bits (652), Expect = 2e-68
 Identities = 131/147 (89%), Positives = 139/147 (94%)

Query: 1   MYYKNLYLVVKLEDLRKQLEELKKRLEVLEERIDPVDEVMLSIKARLRKKLETLPELDEE 60
           MYYKNLYLV+ LEDL+KQLEELKKRLEVLEE IDPVDEVMLSIK RL+KKLE LPELDEE
Sbjct: 1   MYYKNLYLVIGLEDLKKQLEELKKRLEVLEENIDPVDEVMLSIKIRLKKKLEVLPELDEE 60

Query: 61  KAAKILKALANPDRIRIMKMLSERPMGFKEIKDELGVESPTVSHHLKLLLKTRMIRKREK 120
           KAAK+LKALANPDRI+IMKMLSERPMGFKEIKD L VESPTVSHHLKLLLKTRMIRKREK
Sbjct: 61  KAAKVLKALANPDRIKIMKMLSERPMGFKEIKDSLKVESPTVSHHLKLLLKTRMIRKREK 120

Query: 121 YEITNDGLLFLRILEIMSALEEGEEDV 147
           YEIT DGLLFLRIL I+SALEEGE++V
Sbjct: 121 YEITEDGLLFLRILRIISALEEGEDNV 147


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.318    0.138    0.361 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48907661
Number of Sequences: 2977
Number of extensions: 1875109
Number of successful extensions: 17560
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17554
Number of HSP's gapped (non-prelim): 2
length of query: 147
length of database: 189,106,746
effective HSP length: 59
effective length of query: 88
effective length of database: 153,796,013
effective search space: 13534049144
effective search space used: 13534049144
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 161 (67.1 bits)